pycom08g08030

disease resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
6475702 .. 6479483
3782 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g08030.2

Sequence Viewer

Length: 2220 bp
ATGTCTAAATCAATTGAGGGAAAGAAGTTTCTCCTTGTCCTAGACGATGTGTGGACTGAAGACCAAAGAAAGTGGGAGAAATTGAAGTTGCCATTAATACAAAGTGGCGCCCATGGTAGTAGAATATTGGTAACCACTCGAAAACAAGAGGTTGCTGATATGATGGGAGCTCTCACTCACACAATCTATTTGGAGAGGTTGAGCGAACAATATTGTTTGTCAATATTCAACCGCATGGCATTTTATAATAGGGATAAGGATGGTGTGTTGGAAGCCATTGGTGAAGAAATAGCAAAAAAGTGCAAGGGTTTGCCTCTGGCTGCAAAGACTTTGGGTAGTCTCATGCGTTACAAGAAAACGAGGAAAGAATGGCAAGAAGTTTTGAACAGTAAGATATGGGACCTTGAAGAGGTTGAGCAACAAGTTTTCCAACCACTATTACTGAGTTATTTTGATTTGGCACCTGCGGTCAGACGATGCCTTCTATATTGTGTTATCTTTCCAAAAGATCATTTGATCTATAAAGATTATTTGATTGAGTTGTGGATGTCACAAGATTATCTCTATTCGAAAGGAAACATAGAGAAAGAAATAATTGGCCAAAGGTTTTTTGATAATTTAGCAATGCGATCTTTCTTTCAAGGCTTTGAAAAACACAATGATGGAAATATCTGGAGGTGTAAAATGCATGATATTGTGCATGACTTTCTGCAGTATCTTACTCAACATGAATGCTTTACAATGGAGGTTAAGGGTGGTAACAGTACAATAAAGCCCTTGGGTGATAAGATCCGCCATTTGACTTTAATGCTTGCACCTGAGGGTCTACTCTCATGTGTTTCGTTTTCCAGCTGCGATCTACGTACTTTTGCAACTTTTGATTCAAAATTTAATGTTGTGGACTCAACTTTGATCTCGCAATTGAAACATCTTAGGACATTAAATTTGAGTGGTGGTTGTATTGAAGTGCTTCCGGAAGAGATAGGTGAATTGGTGCATCTGAGGTTAATTGATTTGTCCAAAAATCCTTTGAAAAAGCTACCGAATGGGGTGTGTAATTTATACAATTTGCAGACATTGCGCCTTAATTGGTGTAGGGTACTTGAAAGTCTACCTCAGAGCATGGGAAAGTTGATTAACTTAAAGCATCTTTATGTTGAGGGTTGCTATGAGCTGAAGTACTTGCCGAAAGGGATTGGGAGATTAACAAATCTAAGAGGACTCGATCGGTGCCCTGTTGGTGGTGGTAAAGATGACAATGAAGCGTTCAAATTGGGAGATTTGAGAAACTTAGACCAACTTCAGGGGACACTCTTCATAGATGTTGATGGGGATATGAAAGTTGTTGCGGGTGAAGGTGAGAAAGCATCACCTTTGGGGAACAAACAACAGCTCTCAAATTTGTATATGGTTTTTACAGATCGGGAAGATGAGGAGGGAAGAAAAAGAAGCAGTAGTAGTGCAGAAACACTGAATTTTTTACGACCGCATCCAAATTTGGAATCTTTATATATTGCAAGGCATAATGAAAGTACTACCCCCAACTGGATCATGTCATTAAACAGTTTGAGATTTCTTACTCTTGATAATTGGAACAAATGTGAAGTTTTACCTCATTTGGGAAGATTGCCATCCCTCGAAAGGCTGACCATTTCTCATATGAAAGGAGTAAAAAAGGTTGGAGTTGAGTTTCTGGGAATAGAAAAGGAAACGTCATCAGCATCATCATGCGTTACTCTATTCCCAAAACTTAAAGAACTCGTATTTTGGAAGATGGAGGCATGGGAAGAGTGGAAAGGAGTGGAAGAGTGGAAGGAAAAGGATTCTCATATTACCATAATGCCATGCCTTTCTTCTTTAGAGATTGGGAACTGCCCTCAGCTAAAGACACTGCCAGACTTCTTGCGGAAAACACCACTTCAGACACTAAGCATCATATACTGTGATAGTCTTGCACAAGATTGCCGCAGAGGAAATGAGTGGATTTCTCACATCCCCAACACCAAAATCAGAGGTTGTGTGCATAAGAAAGGAGGTGATCTTACCTTGGACCAGGGCCAGGACAGTGCCAGAGGAGGAGGAAGACTCGCAAAGCTGAGAGGAGGCGAGGAACCGTTCGCCTACGCAGATGAGGCCGTGAGGCGGAGAGGCGCAAAGCTTGTAGCGGAGCTGCTCGGCTCCCGTGCGGAGGTCCCAACAACCAATGCCGGCTTCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

740

Amino Acids

84.27

Weight (kDa)

8.1

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 246
AarI CACCTGC 1 cut(s) 472
Acc36I ACCTGC 1 cut(s) 472
AccB1I GGYRCC 3 cut(s) 107, 460, 1230
AccI GTMKAC 2 cut(s) 826, 1111
AccIII TCCGGA 1 cut(s) 973
AclWI GGATC 2 cut(s) 784, 1556
AcoI YGGCCR 1 cut(s) 598
AcsI RAATTY 5 cut(s) 887, 943, 1399, 1474, 1495
AcuI CTGAAG 4 cut(s) 78, 1196, 1286, 1904
AcyI GRCGYC 1 cut(s) 108
AfaI GTAC 5 cut(s) 766, 865, 1101, 1181, 1534
AfiI CCNNNNNNNGG 9 cut(s) 409, 1241, 1303, 1545, 1619, 1641, 2059, 2142, 2188
AjnI CCWGG 2 cut(s) 2052, 2058
AjuI GAANNNNNNNTTGG 1 cut(s) 2195
AluBI AGCT 9 cut(s) 170, 852, 1039, 1174, 1393, 1882, 2095, 2158, 2170
AluI AGCT 9 cut(s) 170, 852, 1039, 1174, 1393, 1882, 2095, 2158, 2170
Alw21I GWGCWC 1 cut(s) 172
Alw26I GTCTC 1 cut(s) 344
AlwI GGATC 2 cut(s) 784, 1556
Aor13HI TCCGGA 1 cut(s) 973
AoxI GGCC 3 cut(s) 598, 2056, 2133
ApeKI GCWGC 3 cut(s) 320, 852, 2170
ApoI RAATTY 5 cut(s) 887, 943, 1399, 1474, 1495
ArsI GACNNNNNNTTYG 2 cut(s) 928, 960
AseI ATTAAT 1 cut(s) 95
Asp700I GAANNNNTTC 1 cut(s) 969
AspLEI GCGC 3 cut(s) 110, 1083, 2153
AspS9I GGNCC 4 cut(s) 400, 2050, 2056, 2191
AsuHPI GGTGA 7 cut(s) 293, 794, 998, 1362, 1364, 1370, 2048
AsuII TTCGAA 1 cut(s) 569
AvaII GGWCC 3 cut(s) 400, 2050, 2191
AxyI CCTNAGG 1 cut(s) 819
BaeGI GKGCMC 1 cut(s) 1235
BalI TGGCCA 1 cut(s) 600
BanI GGYRCC 3 cut(s) 107, 460, 1230
BanII GRGCYC 1 cut(s) 172
BbsI GAAGAC 2 cut(s) 66, 2089
Bbv12I GWGCWC 1 cut(s) 172
BbvCI CCTCAGC 1 cut(s) 1878
BbvI GCAGC 3 cut(s) 307, 839, 2157
BccI CCATC 6 cut(s) 157, 254, 656, 1322, 1639, 1768
BceAI ACGGC 1 cut(s) 2120
BciT130I CCWGG 2 cut(s) 2054, 2060
BcoDI GTCTC 1 cut(s) 344
BfaI CTAG 1 cut(s) 41
BfmI CTRYAG 1 cut(s) 710
BfoI RGCGCY 1 cut(s) 111
BfuAI ACCTGC 1 cut(s) 472
BisI GCNGC 4 cut(s) 321, 853, 1966, 2171
BlsI GCNGC 4 cut(s) 322, 854, 1967, 2172
BmcAI AGTACT 2 cut(s) 1181, 1534
Bme1390I CCNGG 2 cut(s) 2054, 2060
Bme18I GGWCC 3 cut(s) 400, 2050, 2191
BmgT120I GGNCC 4 cut(s) 400, 2050, 2056, 2191
BmiI GGNNCC 7 cut(s) 109, 401, 462, 1232, 2112, 2179, 2193
BmrFI CCNGG 2 cut(s) 2054, 2060
BmsI GCATC 7 cut(s) 467, 1006, 1156, 1376, 1498, 1730, 1941
BpiI GAAGAC 2 cut(s) 66, 2089
BplI GAGNNNNNCTC 2 cut(s) 2070, 2102
BpmI CTGGAG 1 cut(s) 694
Bpu10I CCTNAGC 1 cut(s) 1878
Bpu14I TTCGAA 1 cut(s) 569
BsaAI YACGTR 1 cut(s) 863
BsaBI GATNNNNATC 1 cut(s) 1630
BsaHI GRCGYC 1 cut(s) 108
BsaJI CCNNGG 4 cut(s) 112, 777, 2046, 2053
BsaWI WCCGGW 1 cut(s) 973
Bsc4I CCNNNNNNNGG 9 cut(s) 409, 1241, 1303, 1545, 1619, 1641, 2059, 2142, 2188
Bse118I RCCGGY 1 cut(s) 2207
Bse1I ACTGG 1 cut(s) 1550
Bse21I CCTNAGG 1 cut(s) 819
Bse3DI GCAATG 2 cut(s) 630, 1076
Bse8I GATNNNNATC 1 cut(s) 1630
BseAI TCCGGA 1 cut(s) 973
BseBI CCWGG 2 cut(s) 2054, 2060
BseDI CCNNGG 4 cut(s) 112, 777, 2046, 2053
BseGI GGATG 5 cut(s) 265, 552, 1489, 1631, 1992
BseJI GATNNNNATC 1 cut(s) 1630
BseLI CCNNNNNNNGG 9 cut(s) 409, 1241, 1303, 1545, 1619, 1641, 2059, 2142, 2188
BseMI GCAATG 2 cut(s) 630, 1076
BseMII CTCAG 6 cut(s) 434, 810, 992, 1130, 1892, 2087
BseNI ACTGG 1 cut(s) 1550
BseRI GAGGAG 4 cut(s) 1448, 2088, 2091, 2115
BseSI GKGCMC 1 cut(s) 1235
BseXI GCAGC 3 cut(s) 307, 839, 2157
BsgI GTGCAG 1 cut(s) 1482
Bsh1285I CGRYCG 2 cut(s) 1228, 1487
BshFI GGCC 3 cut(s) 600, 2058, 2135
BshNI GGYRCC 3 cut(s) 107, 460, 1230
BsiEI CGRYCG 2 cut(s) 1228, 1487
BsiHKAI GWGCWC 1 cut(s) 172
BsiSI CCGG 2 cut(s) 974, 2208
BslFI GGGAC 3 cut(s) 413, 1321, 2177
BslI CCNNNNNNNGG 9 cut(s) 409, 1241, 1303, 1545, 1619, 1641, 2059, 2142, 2188
BsmAI GTCTC 1 cut(s) 344
BsmFI GGGAC 3 cut(s) 413, 1321, 2177
BsmI GAATGC 1 cut(s) 737
BsnI GGCC 3 cut(s) 600, 2058, 2135
Bsp119I TTCGAA 1 cut(s) 569
Bsp1286I GDGCHC 2 cut(s) 172, 1235
Bsp13I TCCGGA 1 cut(s) 973
Bsp19I CCATGG 1 cut(s) 112
BspANI GGCC 3 cut(s) 600, 2058, 2135
BspCNI CTCAG 6 cut(s) 435, 811, 993, 1129, 1891, 2088
BspEI TCCGGA 1 cut(s) 973
BspLI GGNNCC 7 cut(s) 109, 401, 462, 1232, 2112, 2179, 2193
BspMAI CTGCAG 1 cut(s) 714
BspMI ACCTGC 1 cut(s) 472
BspPI GGATC 2 cut(s) 784, 1556
BspT104I TTCGAA 1 cut(s) 569
BspT107I GGYRCC 3 cut(s) 107, 460, 1230
BsrDI GCAATG 2 cut(s) 630, 1076
BsrFI RCCGGY 1 cut(s) 2207
BsrI ACTGG 1 cut(s) 1550
BssAI RCCGGY 1 cut(s) 2207
BssECI CCNNGG 4 cut(s) 112, 777, 2046, 2053
BssNI GRCGYC 1 cut(s) 108
BssT1I CCWWGG 3 cut(s) 112, 777, 2046
Bst2UI CCWGG 2 cut(s) 2054, 2060
Bst4CI ACNGT 6 cut(s) 389, 764, 1565, 1943, 2066, 2115
Bst6I CTCTTC 5 cut(s) 402, 972, 1319, 1782, 1800
BstACI GRCGYC 1 cut(s) 108
BstAPI GCANNNNNTGC 1 cut(s) 1078
BstBAI YACGTR 1 cut(s) 863
BstBI TTCGAA 1 cut(s) 569
BstC8I GCNNGC 2 cut(s) 813, 2209
BstDSI CCRYGG 1 cut(s) 112
BstEII GGTNACC 1 cut(s) 130
BstENI CCTNNNNNAGG 1 cut(s) 407
BstF5I GGATG 5 cut(s) 265, 552, 1489, 1631, 1992
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 3 cut(s) 110, 1083, 2153
BstMAI GTCTC 1 cut(s) 344
BstMCI CGRYCG 2 cut(s) 1228, 1487
BstMWI GCNNNNNNNGC 2 cut(s) 1078, 2132
BstNI CCWGG 2 cut(s) 2054, 2060
BstPI GGTNACC 1 cut(s) 130
BstSCI CCNGG 2 cut(s) 2052, 2058
BstSFI CTRYAG 1 cut(s) 710
BstSLI GKGCMC 1 cut(s) 1235
BstSNI TACGTA 1 cut(s) 863
BstV1I GCAGC 3 cut(s) 307, 839, 2157
BstV2I GAAGAC 2 cut(s) 66, 2089
BstX2I RGATCY 1 cut(s) 789
BstYI RGATCY 1 cut(s) 789
Bsu36I CCTNAGG 1 cut(s) 819
BsuRI GGCC 3 cut(s) 600, 2058, 2135
BtgI CCRYGG 1 cut(s) 112
BtsCI GGATG 5 cut(s) 265, 552, 1489, 1631, 1992
BtsI GCAGTG 1 cut(s) 1889
BtsIMutI CAGTG 3 cut(s) 1469, 1889, 2071
BveI ACCTGC 1 cut(s) 472
Cac8I GCNNGC 2 cut(s) 813, 2209
CfoI GCGC 3 cut(s) 110, 1083, 2153
Cfr10I RCCGGY 1 cut(s) 2207
Cfr13I GGNCC 4 cut(s) 400, 2050, 2056, 2191
Csp6I GTAC 5 cut(s) 765, 864, 1100, 1180, 1533
CspCI CAANNNNNGTGG 2 cut(s) 53, 88
CviQI GTAC 5 cut(s) 765, 864, 1100, 1180, 1533
DinI GGCGCC 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 598
Eam1104I CTCTTC 5 cut(s) 402, 972, 1319, 1782, 1800
EarI CTCTTC 5 cut(s) 402, 972, 1319, 1782, 1800
EciI GGCGGA 2 cut(s) 782, 2158
Ecl136II GAGCTC 1 cut(s) 170
Eco105I TACGTA 1 cut(s) 863
Eco130I CCWWGG 3 cut(s) 112, 777, 2046
Eco24I GRGCYC 1 cut(s) 172
Eco47I GGWCC 3 cut(s) 400, 2050, 2191
Eco53kI GAGCTC 1 cut(s) 170
Eco57I CTGAAG 4 cut(s) 78, 1196, 1286, 1904
Eco81I CCTNAGG 1 cut(s) 819
Eco91I GGTNACC 1 cut(s) 130
EcoICRI GAGCTC 1 cut(s) 170
EcoNI CCTNNNNNAGG 1 cut(s) 407
EcoO109I RGGNCCY 2 cut(s) 400, 2191
EcoO65I GGTNACC 1 cut(s) 130
EcoRII CCWGG 2 cut(s) 2052, 2058
EcoT14I CCWWGG 3 cut(s) 112, 777, 2046
EcoT22I ATGCAT 1 cut(s) 690
EcoT38I GRGCYC 1 cut(s) 172
EgeI GGCGCC 1 cut(s) 109
EheI GGCGCC 1 cut(s) 109
ErhI CCWWGG 3 cut(s) 112, 777, 2046
FaqI GGGAC 3 cut(s) 413, 1321, 2177
FauI CCCGC 1 cut(s) 1342
FauNDI CATATG 1 cut(s) 1659
FblI GTMKAC 2 cut(s) 826, 1111
Fnu4HI GCNGC 4 cut(s) 321, 853, 1966, 2171
FokI GGATG 5 cut(s) 272, 559, 1476, 1618, 1979
FriOI GRGCYC 1 cut(s) 172
Fsp4HI GCNGC 4 cut(s) 321, 853, 1966, 2171
FspBI CTAG 1 cut(s) 41
GlaI GCGC 3 cut(s) 109, 1082, 2152
GluI GCNGC 4 cut(s) 321, 853, 1966, 2171
GsuI CTGGAG 1 cut(s) 694
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 3 cut(s) 600, 2058, 2135
HapII CCGG 2 cut(s) 974, 2208
HhaI GCGC 3 cut(s) 110, 1083, 2153
Hin1I GRCGYC 1 cut(s) 108
Hin6I GCGC 3 cut(s) 108, 1081, 2151
HinP1I GCGC 3 cut(s) 108, 1081, 2151
HindIII AAGCTT 1 cut(s) 2156
HinfI GANTC 6 cut(s) 881, 902, 1221, 1502, 1823, 2085
HpaII CCGG 2 cut(s) 974, 2208
HphI GGTGA 7 cut(s) 293, 794, 998, 1362, 1364, 1370, 2048
Hpy166II GTNNAC 4 cut(s) 54, 827, 901, 1112
Hpy188I TCNGA 5 cut(s) 473, 1002, 1119, 1923, 2012
Hpy188III TCNNGA 4 cut(s) 673, 974, 1424, 1583
Hpy8I GTNNAC 4 cut(s) 54, 827, 901, 1112
HpyAV CCTTC 3 cut(s) 491, 1349, 1807
HpyCH4III ACNGT 6 cut(s) 389, 764, 1565, 1943, 2066, 2115
HpyCH4IV ACGT 2 cut(s) 862, 1712
HpyF10VI GCNNNNNNNGC 2 cut(s) 1078, 2132
HpySE526I ACGT 2 cut(s) 862, 1712
Hsp92I GRCGYC 1 cut(s) 108
HspAI GCGC 3 cut(s) 108, 1081, 2151
KasI GGCGCC 1 cut(s) 107
Kpn2I TCCGGA 1 cut(s) 973
KroI GCCGGC 1 cut(s) 2207
KroNI GCCGGC 1 cut(s) 2209
LmnI GCTCC 3 cut(s) 167, 2167, 2183
Lsp1109I GCAGC 3 cut(s) 307, 839, 2157
LweI GCATC 7 cut(s) 467, 1006, 1156, 1376, 1498, 1730, 1941
MaeI CTAG 1 cut(s) 41
MaeII ACGT 2 cut(s) 862, 1712
MaeIII GTNAC 5 cut(s) 130, 347, 549, 758, 1732
MfeI CAATTG 2 cut(s) 12, 920
MflI RGATCY 1 cut(s) 789
MhlI GDGCHC 2 cut(s) 172, 1235
MlsI TGGCCA 1 cut(s) 600
MluNI TGGCCA 1 cut(s) 600
Mly113I GGCGCC 1 cut(s) 108
MlyI GAGTC 3 cut(s) 896, 1215, 2079
MmeI TCCRAC 3 cut(s) 249, 454, 1660
Mox20I TGGCCA 1 cut(s) 600
Mph1103I ATGCAT 1 cut(s) 690
MroI TCCGGA 1 cut(s) 973
MroNI GCCGGC 1 cut(s) 2207
MroXI GAANNNNTTC 1 cut(s) 969
MscI TGGCCA 1 cut(s) 600
MslI CAYNNNNRTG 3 cut(s) 660, 1152, 1726
Msp20I TGGCCA 1 cut(s) 600
MspA1I CMGCKG 1 cut(s) 852
MspI CCGG 2 cut(s) 974, 2208
MspR9I CCNGG 2 cut(s) 2054, 2060
MunI CAATTG 2 cut(s) 12, 920
Mva1269I GAATGC 1 cut(s) 737
MvaI CCWGG 2 cut(s) 2054, 2060
MwoI GCNNNNNNNGC 2 cut(s) 1078, 2132
NaeI GCCGGC 1 cut(s) 2209
NarI GGCGCC 1 cut(s) 108
NcoI CCATGG 1 cut(s) 112
NdeI CATATG 1 cut(s) 1659
NgoMIV GCCGGC 1 cut(s) 2207
NlaIV GGNNCC 7 cut(s) 109, 401, 462, 1232, 2112, 2179, 2193
NmeAIII GCCGAG 1 cut(s) 2154
NmuCI GTSAC 1 cut(s) 549
NsiI ATGCAT 1 cut(s) 690
NspV TTCGAA 1 cut(s) 569
PaqCI CACCTGC 1 cut(s) 472
PctI GAATGC 1 cut(s) 737
PdiI GCCGGC 1 cut(s) 2209
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 3 cut(s) 881, 1502, 1823
PkrI GCNGC 4 cut(s) 322, 854, 1967, 2172
Ple19I CGATCG 1 cut(s) 1228
PleI GAGTC 3 cut(s) 896, 1215, 2079
PluTI GGCGCC 1 cut(s) 111
PpsI GAGTC 3 cut(s) 896, 1215, 2079
Ppu21I YACGTR 1 cut(s) 863
PpuMI RGGWCCY 2 cut(s) 400, 2191
PshBI ATTAAT 1 cut(s) 95
PsiI TTATAA 1 cut(s) 246
Psp124BI GAGCTC 1 cut(s) 172
Psp5II RGGWCCY 2 cut(s) 400, 2191
Psp6I CCWGG 2 cut(s) 2052, 2058
PspEI GGTNACC 1 cut(s) 130
PspGI CCWGG 2 cut(s) 2052, 2058
PspN4I GGNNCC 7 cut(s) 109, 401, 462, 1232, 2112, 2179, 2193
PspPI GGNCC 4 cut(s) 400, 2050, 2056, 2191
PspPPI RGGWCCY 2 cut(s) 400, 2191
PstI CTGCAG 1 cut(s) 714
PsuI RGATCY 1 cut(s) 789
PvuI CGATCG 1 cut(s) 1228
PvuII CAGCTG 1 cut(s) 852
RsaI GTAC 5 cut(s) 766, 865, 1101, 1181, 1534
RsaNI GTAC 5 cut(s) 765, 864, 1100, 1180, 1533
RseI CAYNNNNRTG 3 cut(s) 660, 1152, 1726
SacI GAGCTC 1 cut(s) 172
SatI GCNGC 4 cut(s) 321, 853, 1966, 2171
Sau96I GGNCC 4 cut(s) 400, 2050, 2056, 2191
ScaI AGTACT 2 cut(s) 1181, 1534
SchI GAGTC 3 cut(s) 896, 1215, 2079
ScrFI CCNGG 2 cut(s) 2054, 2060
SduI GDGCHC 2 cut(s) 172, 1235
SfaNI GCATC 7 cut(s) 467, 1006, 1156, 1376, 1498, 1730, 1941
SfcI CTRYAG 1 cut(s) 710
SfoI GGCGCC 1 cut(s) 109
SfuI TTCGAA 1 cut(s) 569
SinI GGWCC 3 cut(s) 400, 2050, 2191
SmiMI CAYNNNNRTG 3 cut(s) 660, 1152, 1726
SnaBI TACGTA 1 cut(s) 863
SspDI GGCGCC 1 cut(s) 107
SspI AATATT 3 cut(s) 126, 212, 225
SspMI CTAG 1 cut(s) 41
SstI GAGCTC 1 cut(s) 172
StyD4I CCNGG 2 cut(s) 2052, 2058
StyI CCWWGG 3 cut(s) 112, 777, 2046
TaaI ACNGT 6 cut(s) 389, 764, 1565, 1943, 2066, 2115
TaiI ACGT 2 cut(s) 865, 1715
TaqI TCGA 5 cut(s) 139, 569, 1224, 1638, 2214
TatI WGTACW 3 cut(s) 764, 1179, 1532
TauI GCSGC 1 cut(s) 1968
TfiI GAWTC 3 cut(s) 881, 1502, 1823
TscAI CASTG 3 cut(s) 1476, 1896, 2071
TseFI GTSAC 1 cut(s) 549
TseI GCWGC 3 cut(s) 320, 852, 2170
Tsp45I GTSAC 1 cut(s) 549
TspDTI ATGAA 6 cut(s) 744, 1275, 1306, 1352, 1542, 1676
TspRI CASTG 3 cut(s) 1476, 1896, 2071
VpaK11BI GGWCC 3 cut(s) 400, 2050, 2191
VspI ATTAAT 1 cut(s) 95
XagI CCTNNNNNAGG 1 cut(s) 407
XapI RAATTY 5 cut(s) 887, 943, 1399, 1474, 1495
XmiI GTMKAC 2 cut(s) 826, 1111
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 1 cut(s) 41
ZrmI AGTACT 2 cut(s) 1181, 1534
Zsp2I ATGCAT 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.