Rorug02G0319600

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
39096273 .. 39099738
3466 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0319600.1

Sequence Viewer

Length: 2199 bp
ATGGGGGGAATGGGGAAAACAACTCTTGCTCAACTTGTTTATAATGATGAAAATGTCAAATCTCATTTTGACAAGAGAATATGGGTCTGTGTCTCGGACCCTTTTGAAGAGATCAAGATTGCTCAAGCTATCATTGAAGAAATAGATAAAGATAATAGTTCAAAAAGCTCAAATGTGTTGCAAACCCTGACGCAATGTATAGATAAATTGATTGAGGGTAAAAAGTTTCTCCTAGTTTTAGATGATGTTTGGAGCCCAAACTCTGATCAATGGGAAGAATTGATCAAACCTTTACCTAATGGTGGTATAGGAAGTAGGATATTGGTGACCACTAGAAAGGAGGAGGTTGTTACTTTAATGAAAGCAACAACTCAATTGATCCATTTGAAGGAGTTGGGTGAAGCATTTTGTTTGTCATTGTTCTATTACAGTGCAGACATGGATGAGAGTAGTGTGTCCACCGAGTTTAAAAATATTGGATCAGAGATTGTGAAAAGGTGCAATGGGTTGCCTCTTGCTGCAAAGACATTAGGAAGCCTCATGCGTAATAAGAAAAAGATTCATGAATGGCAAGCTGTTTTAAAGAGTAAGACATGGGAATTGAAAGAGATTCAACAAGATGTTTTTCGACCACTACTATTAAGTTATCATGATTTGAGTCCAGCAACCAAACGTTGTCTTTTGTATTGTGTTACATTTCCAAAAGATTATGTGTACAATAGGAATTGTTTGATTAAGTTGTGGATGTCGCAAGATTATTTGAATGTCAAAGAAAGTAAAGAAAAGATAGTGGTTGGTCAAAATTATTTTGATGACTTAGCAGTGCGGTCATTTTTTCAAGATATTGAGGATGTTCAGTTTGAGTATGGAAACATAAAATGCAAATTTCATGATATTGTACATGACTTTCTACGATATTTGACAGAAAATGAATGTTTGATTTTGGATTTTGAGTTGGATGCTAGTAAGAGAAGAGATGTGTCAAAGGATAAAGTTCATCATTTGACCTTAGTGCATGCAACCGAGGGTGATTCTCTGCAAACTTTTCTCCCTAATTATAAAAAATTACGTACCTTGATAGCTATACAATCATCCGAATATTCCATTGGCCCAATATTTGAGTTGATAGTACAATTGAAATGCCTTAGAACATTAGACTTGCGTGGTTGGCGGGGGAAGGGTTGTCTCAAAGAAATTCCCGAGACGATAGGTGGATTGATACATTTGAGGTATCTCGATTTATCCGAGAATTTGGGGTTGGAGGAATTACCCAGCGCCCTGGGCAGCTTATACAACCTGCAAACCTTGCGGCTTGTTCGTTGCGTGAATCTGAAAAAAGTAGATGTCCGAAGGCTGATTAACTTGAGGCATCTTTATGTTGAAGGCTGTTGGGAGCTAAAGTTAACTGAAGGGATTGAGAAATTAACAGATCTGCAAAGGCTAGATCAGTTTGTTGTCCCAATTATCGGTGGTGATGAAGGAAACAAGTTGGAACATCTGAAAGACTTGAACCAGCTTCAAGGGAGTCTTGCTATTCGTATTCTGGGAAATCCAAATATGGCGGAGAATGCAGCAGCAATCATGGTGAATAAGGCTCACCTCCTGGAATTGAGACTAGAGTTTTACTCGGTTGATGAAGGAAAGCATGGAGAAATTATGAATGGCTTAGAGCCCCATCCAGATTTGGAATCTTTATACATCTGGTTTTATAAAGGTGGCGCCTTCTCCCATTGGTTGTCGTATTTACACAGCTTGAGAATGCTCATCCTTGAGACTTGCACGGAATGTGGGGTTTTGCCTCCTTTAGGGAAACTGGCGTCCCTTGAATCATTGCATATTGTGCAACTCCATGGAGTCTCAAAGGTAGGAGTTGAGTTTTTGGGAATAGATGATGGGCAAACCTCCTCCTCCTCGTCTTCCATTTTCATATCATTCCCCAAGCTTAAACAACTCGGCTTCTACAACATGGGGACATGGGAAGAGTGGGTAGGAGTGGAAAATAATAATATTACAATCATGCCATGCCTCTCTCAATTGACAATTGGGTACTGCTACAAGCTAAAAGCACTGCCGGACTTCCTGTGGGAGACACCACTACAGAAATTGCACATCTTTAGATCTCTAATTCTCCAAGACCTTTACAGACAAGGAATAAGTGAGAAGTGGGCCAAGATCCCAACCATCGTGATAGAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

732

Amino Acids

83.74

Weight (kDa)

5.98

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 144 3.1e-32 NB-ARC domain
WHD_DRP PF23559 233 - 303 2.2e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 356 - 682 6.8e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 497 - 615 9.5e-27 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 42, 1059, 1710
Acc36I ACCTGC 1 cut(s) 1305
AccB1I GGYRCC 1 cut(s) 1718
AciI CCGC 4 cut(s) 826, 1171, 1309, 1562
AclI AACGTT 1 cut(s) 673
AclWI GGATC 3 cut(s) 373, 487, 2167
AcsI RAATTY 3 cut(s) 884, 1194, 1249
AcuI CTGAAG 1 cut(s) 1428
AcyI GRCGYC 2 cut(s) 1719, 1817
AfaI GTAC 5 cut(s) 716, 900, 1072, 1131, 2048
AfiI CCNNNNNNNGG 4 cut(s) 302, 388, 1466, 1805
AjnI CCWGG 2 cut(s) 1278, 1602
AjuI GAANNNNNNNTTGG 4 cut(s) 1089, 1121, 1241, 1273
Alw26I GTCTC 7 cut(s) 97, 1190, 1196, 1606, 1766, 1861, 2081
AlwI GGATC 3 cut(s) 373, 487, 2167
Ama87I CYCGRG 1 cut(s) 1199
AoxI GGCC 2 cut(s) 1108, 2166
ApeKI GCWGC 4 cut(s) 518, 1284, 1571, 1574
ApoI RAATTY 3 cut(s) 884, 1194, 1249
AspLEI GCGC 2 cut(s) 1277, 1721
AspS9I GGNCC 3 cut(s) 97, 1109, 2166
AsuHPI GGTGA 6 cut(s) 337, 410, 1040, 1484, 1589, 1597
AvaI CYCGRG 1 cut(s) 1199
AvaII GGWCC 1 cut(s) 97
BanI GGYRCC 1 cut(s) 1718
BanII GRGCYC 2 cut(s) 257, 1674
BbsI GAAGAC 1 cut(s) 1908
BbvI GCAGC 4 cut(s) 505, 1296, 1583, 1586
BccI CCATC 3 cut(s) 1683, 1886, 2189
BciT130I CCWGG 2 cut(s) 1280, 1604
BclI TGATCA 2 cut(s) 265, 282
BcoDI GTCTC 7 cut(s) 97, 1190, 1196, 1606, 1766, 1861, 2081
BfaI CTAG 5 cut(s) 233, 333, 963, 1442, 1616
BfmI CTRYAG 1 cut(s) 2096
BfoI RGCGCY 2 cut(s) 1278, 1722
BfuAI ACCTGC 1 cut(s) 1305
BglII AGATCT 2 cut(s) 1429, 2117
BisI GCNGC 5 cut(s) 519, 1285, 1310, 1572, 1575
BlsI GCNGC 5 cut(s) 520, 1286, 1311, 1573, 1576
Bme1390I CCNGG 2 cut(s) 1280, 1604
Bme18I GGWCC 1 cut(s) 97
BmeT110I CYCGRG 1 cut(s) 1199
BmgT120I GGNCC 3 cut(s) 97, 1109, 2166
BmiI GGNNCC 3 cut(s) 99, 254, 1720
BmrFI CCNGG 2 cut(s) 1280, 1604
BmsI GCATC 2 cut(s) 949, 1378
BpiI GAAGAC 1 cut(s) 1908
BplI GAGNNNNNCTC 2 cut(s) 1610, 1642
BpuEI CTTGAG 4 cut(s) 108, 1384, 1774, 1790
BsaAI YACGTR 1 cut(s) 1070
BsaHI GRCGYC 2 cut(s) 1719, 1817
BsaJI CCNNGG 4 cut(s) 1023, 1278, 1279, 1849
BsaXI ACNNNNNCTCC 2 cut(s) 1385, 1415
Bsc4I CCNNNNNNNGG 4 cut(s) 302, 388, 1466, 1805
Bse1I ACTGG 1 cut(s) 1818
Bse3DI GCAATG 3 cut(s) 200, 508, 1829
BseBI CCWGG 2 cut(s) 1280, 1604
BseDI CCNNGG 4 cut(s) 1023, 1278, 1279, 1849
BseGI GGATG 7 cut(s) 448, 750, 856, 964, 1091, 1675, 1764
BseLI CCNNNNNNNGG 4 cut(s) 302, 388, 1466, 1805
BseMI GCAATG 3 cut(s) 200, 508, 1829
BseNI ACTGG 1 cut(s) 1818
BseRI GAGGAG 4 cut(s) 356, 1894, 1897, 1900
BseXI GCAGC 4 cut(s) 505, 1296, 1583, 1586
BseYI CCCAGC 1 cut(s) 1271
BsgI GTGCAG 1 cut(s) 453
BshFI GGCC 2 cut(s) 1110, 2168
BshNI GGYRCC 1 cut(s) 1718
BsiHKCI CYCGRG 1 cut(s) 1199
BsiSI CCGG 1 cut(s) 2072
BslFI GGGAC 3 cut(s) 1442, 1804, 1984
BslI CCNNNNNNNGG 4 cut(s) 302, 388, 1466, 1805
BsmAI GTCTC 7 cut(s) 97, 1190, 1196, 1606, 1766, 1861, 2081
BsmBI CGTCTC 1 cut(s) 1196
BsmFI GGGAC 3 cut(s) 1442, 1804, 1984
BsmI GAATGC 2 cut(s) 1573, 1764
BsnI GGCC 2 cut(s) 1110, 2168
BsoBI CYCGRG 1 cut(s) 1199
Bsp1286I GDGCHC 2 cut(s) 257, 1674
Bsp1407I TGTACA 2 cut(s) 714, 898
Bsp143I GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
Bsp19I CCATGG 1 cut(s) 1849
BspACI CCGC 4 cut(s) 826, 1171, 1309, 1562
BspANI GGCC 2 cut(s) 1110, 2168
BspHI TCATGA 3 cut(s) 562, 649, 889
BspLI GGNNCC 3 cut(s) 99, 254, 1720
BspMI ACCTGC 1 cut(s) 1305
BspPI GGATC 3 cut(s) 373, 487, 2167
BspT107I GGYRCC 1 cut(s) 1718
BsrDI GCAATG 3 cut(s) 200, 508, 1829
BsrGI TGTACA 2 cut(s) 714, 898
BsrI ACTGG 1 cut(s) 1818
BssECI CCNNGG 4 cut(s) 1023, 1278, 1279, 1849
BssMI GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
BssNI GRCGYC 2 cut(s) 1719, 1817
BssT1I CCWWGG 1 cut(s) 1849
Bst2UI CCWGG 2 cut(s) 1280, 1604
Bst4CI ACNGT 1 cut(s) 431
Bst6I CTCTTC 3 cut(s) 102, 967, 1974
BstACI GRCGYC 2 cut(s) 1719, 1817
BstAPI GCANNNNNTGC 2 cut(s) 1306, 1840
BstAUI TGTACA 2 cut(s) 714, 898
BstBAI YACGTR 1 cut(s) 1070
BstC8I GCNNGC 2 cut(s) 573, 1017
BstDEI CTNAG 4 cut(s) 817, 1009, 1145, 1666
BstDSI CCRYGG 1 cut(s) 1849
BstEII GGTNACC 1 cut(s) 325
BstENI CCTNNNNNAGG 1 cut(s) 1803
BstF5I GGATG 7 cut(s) 448, 750, 856, 964, 1091, 1675, 1764
BstH2I RGCGCY 2 cut(s) 1278, 1722
BstHHI GCGC 2 cut(s) 1277, 1721
BstKTI GATC 9 cut(s) 114, 268, 285, 381, 482, 1432, 1447, 2120, 2175
BstMAI GTCTC 7 cut(s) 97, 1190, 1196, 1606, 1766, 1861, 2081
BstMBI GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
BstMWI GCNNNNNNNGC 5 cut(s) 1168, 1281, 1306, 1568, 1840
BstNI CCWGG 2 cut(s) 1280, 1604
BstNSI RCATGY 1 cut(s) 1019
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 2 cut(s) 1278, 1602
BstSFI CTRYAG 1 cut(s) 2096
BstSNI TACGTA 1 cut(s) 1070
BstV1I GCAGC 4 cut(s) 505, 1296, 1583, 1586
BstV2I GAAGAC 1 cut(s) 1908
BstX2I RGATCY 3 cut(s) 1429, 2117, 2172
BstXI CCANNNNNNTGG 1 cut(s) 1279
BstYI RGATCY 3 cut(s) 1429, 2117, 2172
BsuRI GGCC 2 cut(s) 1110, 2168
BtgI CCRYGG 1 cut(s) 1849
BtsCI GGATG 7 cut(s) 448, 750, 856, 964, 1091, 1675, 1764
BtsI GCAGTG 2 cut(s) 828, 2066
BtsIMutI CAGTG 3 cut(s) 436, 828, 2066
BveI ACCTGC 1 cut(s) 1305
Cac8I GCNNGC 2 cut(s) 573, 1017
CciI TCATGA 3 cut(s) 562, 649, 889
CfoI GCGC 2 cut(s) 1277, 1721
Cfr13I GGNCC 3 cut(s) 97, 1109, 2166
CseI GACGC 2 cut(s) 199, 1806
Csp6I GTAC 5 cut(s) 715, 899, 1071, 1130, 2047
CviQI GTAC 5 cut(s) 715, 899, 1071, 1130, 2047
DdeI CTNAG 4 cut(s) 817, 1009, 1145, 1666
DinI GGCGCC 1 cut(s) 1720
DpnI GATC 9 cut(s) 113, 267, 284, 380, 481, 1431, 1446, 2119, 2174
DpnII GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
DraI TTTAAA 2 cut(s) 469, 582
Eam1104I CTCTTC 3 cut(s) 102, 967, 1974
EarI CTCTTC 3 cut(s) 102, 967, 1974
EciI GGCGGA 1 cut(s) 1577
Eco105I TACGTA 1 cut(s) 1070
Eco130I CCWWGG 1 cut(s) 1849
Eco24I GRGCYC 2 cut(s) 257, 1674
Eco47I GGWCC 1 cut(s) 97
Eco57I CTGAAG 1 cut(s) 1428
Eco88I CYCGRG 1 cut(s) 1199
Eco91I GGTNACC 1 cut(s) 325
EcoNI CCTNNNNNAGG 1 cut(s) 1803
EcoO65I GGTNACC 1 cut(s) 325
EcoRII CCWGG 2 cut(s) 1278, 1602
EcoT14I CCWWGG 1 cut(s) 1849
EcoT38I GRGCYC 2 cut(s) 257, 1674
EgeI GGCGCC 1 cut(s) 1720
EheI GGCGCC 1 cut(s) 1720
ErhI CCWWGG 1 cut(s) 1849
Esp3I CGTCTC 1 cut(s) 1196
FalI AAGNNNNNCTT 2 cut(s) 1512, 1544
FaqI GGGAC 3 cut(s) 1442, 1804, 1984
FauI CCCGC 1 cut(s) 1164
FbaI TGATCA 2 cut(s) 265, 282
Fnu4HI GCNGC 5 cut(s) 519, 1285, 1310, 1572, 1575
FokI GGATG 7 cut(s) 455, 757, 863, 971, 1078, 1662, 1751
FriOI GRGCYC 2 cut(s) 257, 1674
Fsp4HI GCNGC 5 cut(s) 519, 1285, 1310, 1572, 1575
FspBI CTAG 5 cut(s) 233, 333, 963, 1442, 1616
GlaI GCGC 2 cut(s) 1276, 1720
GluI GCNGC 5 cut(s) 519, 1285, 1310, 1572, 1575
GsaI CCCAGC 1 cut(s) 1275
HaeII RGCGCY 2 cut(s) 1278, 1722
HaeIII GGCC 2 cut(s) 1110, 2168
HapII CCGG 1 cut(s) 2072
HgaI GACGC 2 cut(s) 199, 1806
HhaI GCGC 2 cut(s) 1277, 1721
Hin1I GRCGYC 2 cut(s) 1719, 1817
Hin6I GCGC 2 cut(s) 1275, 1719
HinP1I GCGC 2 cut(s) 1275, 1719
HincII GTYRAC 1 cut(s) 1404
HindII GTYRAC 1 cut(s) 1404
HindIII AAGCTT 1 cut(s) 1940
HinfI GANTC 9 cut(s) 559, 610, 658, 1031, 1327, 1525, 1688, 1826, 1854
HpaI GTTAAC 1 cut(s) 1404
HpaII CCGG 1 cut(s) 2072
HphI GGTGA 6 cut(s) 337, 410, 1040, 1484, 1589, 1597
Hpy166II GTNNAC 3 cut(s) 459, 715, 1404
Hpy188I TCNGA 8 cut(s) 97, 265, 484, 1096, 1246, 1332, 1349, 1500
Hpy188III TCNNGA 9 cut(s) 115, 563, 650, 839, 890, 1199, 1235, 1679, 2185
Hpy8I GTNNAC 3 cut(s) 459, 715, 1404
HpyAV CCTTC 8 cut(s) 382, 1171, 1344, 1376, 1403, 1472, 1631, 1732
HpyCH4III ACNGT 1 cut(s) 431
HpyCH4IV ACGT 2 cut(s) 673, 1069
HpyF10VI GCNNNNNNNGC 5 cut(s) 1168, 1281, 1306, 1568, 1840
HpyF3I CTNAG 4 cut(s) 817, 1009, 1145, 1666
HpySE526I ACGT 2 cut(s) 673, 1069
Hsp92I GRCGYC 2 cut(s) 1719, 1817
HspAI GCGC 2 cut(s) 1275, 1719
KasI GGCGCC 1 cut(s) 1718
Ksp22I TGATCA 2 cut(s) 265, 282
KspAI GTTAAC 1 cut(s) 1404
Kzo9I GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
LmnI GCTCC 2 cut(s) 252, 1393
Lsp1109I GCAGC 4 cut(s) 505, 1296, 1583, 1586
LweI GCATC 2 cut(s) 949, 1378
MaeI CTAG 5 cut(s) 233, 333, 963, 1442, 1616
MaeII ACGT 2 cut(s) 673, 1069
MaeIII GTNAC 3 cut(s) 325, 349, 691
MalI GATC 9 cut(s) 113, 267, 284, 380, 481, 1431, 1446, 2119, 2174
MboI GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
MboII GAAGA 6 cut(s) 119, 149, 287, 984, 1908, 1991
MfeI CAATTG 4 cut(s) 374, 1133, 2033, 2040
MflI RGATCY 3 cut(s) 1429, 2117, 2172
MhlI GDGCHC 2 cut(s) 257, 1674
Mly113I GGCGCC 1 cut(s) 1719
MlyI GAGTC 3 cut(s) 667, 1534, 1863
MmeI TCCRAC 3 cut(s) 936, 1239, 1470
MseI TTAA 9 cut(s) 356, 468, 581, 641, 735, 1359, 1403, 1424, 1944
MslI CAYNNNNRTG 1 cut(s) 1374
MspI CCGG 1 cut(s) 2072
MspR9I CCNGG 2 cut(s) 1280, 1604
MunI CAATTG 4 cut(s) 374, 1133, 2033, 2040
Mva1269I GAATGC 2 cut(s) 1573, 1764
MvaI CCWGG 2 cut(s) 1280, 1604
MwoI GCNNNNNNNGC 5 cut(s) 1168, 1281, 1306, 1568, 1840
NarI GGCGCC 1 cut(s) 1719
NcoI CCATGG 1 cut(s) 1849
NdeII GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
NlaIV GGNNCC 3 cut(s) 99, 254, 1720
NmeAIII GCCGAG 1 cut(s) 1932
NmuCI GTSAC 1 cut(s) 325
NspI RCATGY 1 cut(s) 1019
PaeI GCATGC 1 cut(s) 1019
PagI TCATGA 3 cut(s) 562, 649, 889
PasI CCCWGGG 1 cut(s) 1279
PcsI WCGNNNNNNNCGW 1 cut(s) 1242
PctI GAATGC 2 cut(s) 1573, 1764
PfeI GAWTC 6 cut(s) 559, 610, 1031, 1327, 1688, 1826
PfoI TCCNGGA 1 cut(s) 1602
PkrI GCNGC 5 cut(s) 520, 1286, 1311, 1573, 1576
PleI GAGTC 3 cut(s) 666, 1533, 1862
PluTI GGCGCC 1 cut(s) 1722
PpsI GAGTC 3 cut(s) 666, 1533, 1862
Ppu21I YACGTR 1 cut(s) 1070
PsiI TTATAA 3 cut(s) 42, 1059, 1710
Psp1406I AACGTT 1 cut(s) 673
Psp6I CCWGG 2 cut(s) 1278, 1602
PspEI GGTNACC 1 cut(s) 325
PspFI CCCAGC 1 cut(s) 1271
PspGI CCWGG 2 cut(s) 1278, 1602
PspN4I GGNNCC 3 cut(s) 99, 254, 1720
PspPI GGNCC 3 cut(s) 97, 1109, 2166
PsuI RGATCY 3 cut(s) 1429, 2117, 2172
RsaI GTAC 5 cut(s) 716, 900, 1072, 1131, 2048
RsaNI GTAC 5 cut(s) 715, 899, 1071, 1130, 2047
RseI CAYNNNNRTG 1 cut(s) 1374
SaqAI TTAA 9 cut(s) 356, 468, 581, 641, 735, 1359, 1403, 1424, 1944
SatI GCNGC 5 cut(s) 519, 1285, 1310, 1572, 1575
Sau3AI GATC 9 cut(s) 111, 265, 282, 378, 479, 1429, 1444, 2117, 2172
Sau96I GGNCC 3 cut(s) 97, 1109, 2166
SchI GAGTC 3 cut(s) 667, 1534, 1863
ScrFI CCNGG 2 cut(s) 1280, 1604
SduI GDGCHC 2 cut(s) 257, 1674
SfaNI GCATC 2 cut(s) 949, 1378
SfcI CTRYAG 1 cut(s) 2096
SfoI GGCGCC 1 cut(s) 1720
SinI GGWCC 1 cut(s) 97
SmiMI CAYNNNNRTG 1 cut(s) 1374
SmlI CTYRAG 4 cut(s) 123, 1363, 1753, 1769
SmoI CTYRAG 4 cut(s) 123, 1363, 1753, 1769
SnaBI TACGTA 1 cut(s) 1070
SphI GCATGC 1 cut(s) 1019
SsiI CCGC 4 cut(s) 826, 1171, 1309, 1562
SspDI GGCGCC 1 cut(s) 1718
SspI AATATT 4 cut(s) 475, 1100, 1116, 2008
SspMI CTAG 5 cut(s) 233, 333, 963, 1442, 1616
StyD4I CCNGG 2 cut(s) 1278, 1602
StyI CCWWGG 1 cut(s) 1849
TaaI ACNGT 1 cut(s) 431
TaiI ACGT 2 cut(s) 676, 1072
TaqI TCGA 2 cut(s) 628, 1236
TatI WGTACW 3 cut(s) 714, 898, 1129
TauI GCSGC 1 cut(s) 1312
TfiI GAWTC 6 cut(s) 559, 610, 1031, 1327, 1688, 1826
Tru1I TTAA 9 cut(s) 356, 468, 581, 641, 735, 1359, 1403, 1424, 1944
Tru9I TTAA 9 cut(s) 356, 468, 581, 641, 735, 1359, 1403, 1424, 1944
TscAI CASTG 3 cut(s) 436, 828, 2073
TseFI GTSAC 1 cut(s) 325
TseI GCWGC 4 cut(s) 518, 1284, 1571, 1574
Tsp45I GTSAC 1 cut(s) 325
TspGWI ACGGA 1 cut(s) 1796
TspRI CASTG 3 cut(s) 436, 828, 2073
VpaK11BI GGWCC 1 cut(s) 97
XagI CCTNNNNNAGG 1 cut(s) 1803
XapI RAATTY 3 cut(s) 884, 1194, 1249
XceI RCATGY 1 cut(s) 1019
XspI CTAG 5 cut(s) 233, 333, 963, 1442, 1616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.