MD08G1104200.v1.1

disease resistance protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
8812010 .. 8812990
981 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1104200.v1.1.491

Sequence Viewer

Length: 981 bp
ATGGCTGAGGCACTCATTTATGTGCTGCTCGAAAAATTGGCTACGGTAACTTACCAATACGTCGAAGAAGAGGTGAAGCTGGTTTTGAATGCGGAGAAAGATGTTAAAGAATTCGAGGCCAAACTTAAAGCGATTCGTGCTGTGCTTGAGGATGCGGAGCTAAGGCAAGTGAAGGAGGCCAGCGTCAGAAATTGGTTGGAGGAGCTGACGGAGGTGTCGTACAAGATGGACAACGTGCTGGATGAGTGGAACACTGAAATATTGAAACAAGAAGTTGAGAAACAGGAAGAGCACACGGGAAGAACTTCCCTGGTTACTGAGAAGAAGATGAAGGCGGTATGTTTCTCTATTCCCTCCTCTTGCTTTTGTTTCGGCCAAGTCCGTCAGATAATTCTTCATCGTGACATTGATCTTAAGATCAAAAGTCTGAATGAAAATTTAGATGAGATTGCAAAGCAAAGAGAAACATATAACTTTCGATTCACAAAGAGAATGATCAATGAACAACCTGAGCGAGAGAAAACTTCTTCTTTTGTTGATGAATCTATCATATTTGGTAGAGAAGAACAAAAGGAGGTTTTGGTTAGCAAGTTGTTGAATGAGAGTAATCAAGAAGAGAGGGGCCTCCTTGTTATCCCTATTGTCGGGATGGGAGGAATGGGGAAGACAACTCTGGCCCAACTGGCTTTTAACGATGAAAATGTTAAAGCTTGTTTTGAGATCAAAATATGGATTTGTGTTTCAAACCCTTTTGTTGAAATCAAAATTGCCAAAGGCATCATTGAGGGTGTCGGAGCTACCAGCCCAAATTCAGATGAATTGGAAACTTTCTTGCAATGTATGTCTAAATCCATTGAGGGAAAGAAGTTTCTCCTTATCCTAGATGATGTGTGGACTGAAGACCAAAGAAAGTGGGAGAAACTGAAGTTGCCATTAATACAAAGTGGTGCCCATGGCAGTAGAATATTGGTGACCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

327

Amino Acids

37.44

Weight (kDa)

5.13

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 95 2.1e-19 Rx N-terminal domain
NB-ARC PF00931 188 - 326 7.4e-27 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 214
AccB1I GGYRCC 1 cut(s) 947
AciI CCGC 3 cut(s) 92, 155, 335
AcoI YGGCCR 1 cut(s) 373
AcsI RAATTY 3 cut(s) 110, 436, 808
AcuI CTGAAG 2 cut(s) 918, 944
AfaI GTAC 1 cut(s) 221
AfiI CCNNNNNNNGG 1 cut(s) 644
AflII CTTAAG 1 cut(s) 413
AgsI TTSAA 5 cut(s) 88, 265, 598, 744, 758
AjnI CCWGG 1 cut(s) 309
AluBI AGCT 5 cut(s) 79, 160, 205, 710, 797
AluI AGCT 5 cut(s) 79, 160, 205, 710, 797
Alw21I GWGCWC 1 cut(s) 294
AoxI GGCC 5 cut(s) 117, 177, 373, 622, 675
ApeKI GCWGC 1 cut(s) 25
ApoI RAATTY 3 cut(s) 110, 436, 808
AseI ATTAAT 1 cut(s) 935
Asp700I GAANNNNTTC 1 cut(s) 304
AspS9I GGNCC 2 cut(s) 622, 676
AsuHPI GGTGA 1 cut(s) 85
BaeGI GKGCMC 1 cut(s) 952
BanI GGYRCC 1 cut(s) 947
BbsI GAAGAC 2 cut(s) 671, 906
Bbv12I GWGCWC 1 cut(s) 294
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 1 cut(s) 12
BccI CCATC 2 cut(s) 220, 643
BciT130I CCWGG 1 cut(s) 311
BclI TGATCA 1 cut(s) 495
BfaI CTAG 1 cut(s) 881
BfrI CTTAAG 1 cut(s) 413
BglI GCCNNNNNGGC 1 cut(s) 683
BisI GCNGC 1 cut(s) 26
BlsI GCNGC 1 cut(s) 27
Bme1390I CCNGG 1 cut(s) 311
BmgT120I GGNCC 2 cut(s) 622, 676
BmiI GGNNCC 2 cut(s) 623, 949
BmrFI CCNGG 1 cut(s) 311
BmsI GCATC 2 cut(s) 142, 786
BpiI GAAGAC 2 cut(s) 671, 906
Bpu10I CCTNAGC 3 cut(s) 6, 161, 510
BpuEI CTTGAG 1 cut(s) 167
BsaJI CCNNGG 2 cut(s) 309, 952
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 1 cut(s) 644
Bse1I ACTGG 1 cut(s) 687
Bse3DI GCAATG 1 cut(s) 842
BseBI CCWGG 1 cut(s) 311
BseDI CCNNGG 2 cut(s) 309, 952
BseGI GGATG 3 cut(s) 157, 247, 654
BseLI CCNNNNNNNGG 1 cut(s) 644
BseMI GCAATG 1 cut(s) 842
BseMII CTCAG 2 cut(s) 309, 501
BseNI ACTGG 1 cut(s) 687
BseRI GAGGAG 2 cut(s) 215, 346
BseSI GKGCMC 1 cut(s) 952
BseXI GCAGC 1 cut(s) 12
BshFI GGCC 5 cut(s) 119, 179, 375, 624, 677
BshNI GGYRCC 1 cut(s) 947
BsiHKAI GWGCWC 1 cut(s) 294
BslI CCNNNNNNNGG 1 cut(s) 644
BsmI GAATGC 1 cut(s) 94
BsnI GGCC 5 cut(s) 119, 179, 375, 624, 677
Bsp1286I GDGCHC 2 cut(s) 294, 952
Bsp143I GATC 4 cut(s) 409, 417, 495, 720
Bsp19I CCATGG 1 cut(s) 952
BspACI CCGC 3 cut(s) 92, 155, 335
BspANI GGCC 5 cut(s) 119, 179, 375, 624, 677
BspCNI CTCAG 2 cut(s) 310, 502
BspLI GGNNCC 2 cut(s) 623, 949
BspQI GCTCTTC 1 cut(s) 282
BspT107I GGYRCC 1 cut(s) 947
BspTI CTTAAG 1 cut(s) 413
BsrDI GCAATG 1 cut(s) 842
BsrI ACTGG 1 cut(s) 687
BssECI CCNNGG 2 cut(s) 309, 952
BssMI GATC 4 cut(s) 409, 417, 495, 720
BssT1I CCWWGG 1 cut(s) 952
Bst2UI CCWGG 1 cut(s) 311
Bst4CI ACNGT 1 cut(s) 46
Bst6I CTCTTC 3 cut(s) 63, 282, 609
BstAFI CTTAAG 1 cut(s) 413
BstC8I GCNNGC 1 cut(s) 181
BstDEI CTNAG 4 cut(s) 6, 161, 318, 510
BstDSI CCRYGG 1 cut(s) 952
BstEII GGTNACC 1 cut(s) 970
BstF5I GGATG 3 cut(s) 157, 247, 654
BstKTI GATC 4 cut(s) 412, 420, 498, 723
BstMBI GATC 4 cut(s) 409, 417, 495, 720
BstMWI GCNNNNNNNGC 2 cut(s) 137, 683
BstNI CCWGG 1 cut(s) 311
BstPI GGTNACC 1 cut(s) 970
BstSCI CCNGG 1 cut(s) 309
BstSLI GKGCMC 1 cut(s) 952
BstV1I GCAGC 1 cut(s) 12
BstV2I GAAGAC 2 cut(s) 671, 906
BsuRI GGCC 5 cut(s) 119, 179, 375, 624, 677
BtgI CCRYGG 1 cut(s) 952
BtsCI GGATG 3 cut(s) 157, 247, 654
BtsIMutI CAGTG 1 cut(s) 252
Cac8I GCNNGC 1 cut(s) 181
Cfr13I GGNCC 2 cut(s) 622, 676
CseI GACGC 1 cut(s) 172
Csp6I GTAC 1 cut(s) 220
CspCI CAANNNNNGTGG 2 cut(s) 893, 928
CviAII CATG 1 cut(s) 953
CviQI GTAC 1 cut(s) 220
DdeI CTNAG 4 cut(s) 6, 161, 318, 510
DpnI GATC 4 cut(s) 411, 419, 497, 722
DpnII GATC 4 cut(s) 409, 417, 495, 720
DrdI GACNNNNNNGTC 1 cut(s) 214
DseDI GACNNNNNNGTC 1 cut(s) 214
EaeI YGGCCR 1 cut(s) 373
Eam1104I CTCTTC 3 cut(s) 63, 282, 609
EarI CTCTTC 3 cut(s) 63, 282, 609
Eco130I CCWWGG 1 cut(s) 952
Eco57I CTGAAG 2 cut(s) 918, 944
Eco91I GGTNACC 1 cut(s) 970
EcoO109I RGGNCCY 1 cut(s) 622
EcoO65I GGTNACC 1 cut(s) 970
EcoRI GAATTC 1 cut(s) 110
EcoRII CCWGG 1 cut(s) 309
EcoT14I CCWWGG 1 cut(s) 952
ErhI CCWWGG 1 cut(s) 952
FaeI CATG 1 cut(s) 956
FaiI YATR 8 cut(s) 21, 340, 469, 471, 551, 730, 842, 954
FatI CATG 1 cut(s) 952
FbaI TGATCA 1 cut(s) 495
Fnu4HI GCNGC 1 cut(s) 26
FokI GGATG 3 cut(s) 164, 254, 661
Fsp4HI GCNGC 1 cut(s) 26
FspBI CTAG 1 cut(s) 881
GluI GCNGC 1 cut(s) 26
HaeIII GGCC 5 cut(s) 119, 179, 375, 624, 677
HgaI GACGC 1 cut(s) 172
Hin1II CATG 1 cut(s) 956
HindIII AAGCTT 1 cut(s) 708
HinfI GANTC 3 cut(s) 133, 480, 542
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 894
Hpy188I TCNGA 5 cut(s) 188, 387, 429, 794, 814
Hpy188III TCNNGA 3 cut(s) 401, 611, 646
Hpy8I GTNNAC 1 cut(s) 894
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 2 cut(s) 166, 325
HpyCH4III ACNGT 1 cut(s) 46
HpyCH4IV ACGT 2 cut(s) 60, 234
HpyCH4V TGCA 2 cut(s) 452, 835
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 683
HpyF3I CTNAG 4 cut(s) 6, 161, 318, 510
HpySE526I ACGT 2 cut(s) 60, 234
Hsp92II CATG 1 cut(s) 956
Ksp22I TGATCA 1 cut(s) 495
Kzo9I GATC 4 cut(s) 409, 417, 495, 720
LguI GCTCTTC 1 cut(s) 282
LmnI GCTCC 3 cut(s) 157, 202, 794
Lsp1109I GCAGC 1 cut(s) 12
LweI GCATC 2 cut(s) 142, 786
MaeI CTAG 1 cut(s) 881
MaeII ACGT 2 cut(s) 60, 234
MaeIII GTNAC 4 cut(s) 46, 313, 401, 970
MalI GATC 4 cut(s) 411, 419, 497, 722
MboI GATC 4 cut(s) 409, 417, 495, 720
MhlI GDGCHC 2 cut(s) 294, 952
MluCI AATT 8 cut(s) 35, 110, 190, 390, 436, 765, 808, 818
MmeI TCCRAC 2 cut(s) 177, 772
MroXI GAANNNNTTC 1 cut(s) 304
MseI TTAA 6 cut(s) 105, 126, 414, 690, 705, 935
MslI CAYNNNNRTG 1 cut(s) 20
MspCI CTTAAG 1 cut(s) 413
MspR9I CCNGG 1 cut(s) 311
Mva1269I GAATGC 1 cut(s) 94
MvaI CCWGG 1 cut(s) 311
MwoI GCNNNNNNNGC 2 cut(s) 137, 683
NcoI CCATGG 1 cut(s) 952
NdeII GATC 4 cut(s) 409, 417, 495, 720
NlaIII CATG 1 cut(s) 956
NlaIV GGNNCC 2 cut(s) 623, 949
NmuCI GTSAC 2 cut(s) 401, 970
PciSI GCTCTTC 1 cut(s) 282
PcsI WCGNNNNNNNCGW 1 cut(s) 215
PctI GAATGC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 304
PfeI GAWTC 3 cut(s) 133, 480, 542
PkrI GCNGC 1 cut(s) 27
PshBI ATTAAT 1 cut(s) 935
Psp6I CCWGG 1 cut(s) 309
PspEI GGTNACC 1 cut(s) 970
PspGI CCWGG 1 cut(s) 309
PspN4I GGNNCC 2 cut(s) 623, 949
PspPI GGNCC 2 cut(s) 622, 676
RsaI GTAC 1 cut(s) 221
RsaNI GTAC 1 cut(s) 220
RseI CAYNNNNRTG 1 cut(s) 20
SapI GCTCTTC 1 cut(s) 282
SaqAI TTAA 6 cut(s) 105, 126, 414, 690, 705, 935
SatI GCNGC 1 cut(s) 26
Sau3AI GATC 4 cut(s) 409, 417, 495, 720
Sau96I GGNCC 2 cut(s) 622, 676
ScrFI CCNGG 1 cut(s) 311
SduI GDGCHC 2 cut(s) 294, 952
SfaNI GCATC 2 cut(s) 142, 786
SmiMI CAYNNNNRTG 1 cut(s) 20
SmlI CTYRAG 2 cut(s) 146, 413
SmoI CTYRAG 2 cut(s) 146, 413
Sse9I AATT 8 cut(s) 35, 110, 190, 390, 436, 765, 808, 818
SsiI CCGC 3 cut(s) 92, 155, 335
SspI AATATT 2 cut(s) 261, 966
SspMI CTAG 1 cut(s) 881
StyD4I CCNGG 1 cut(s) 309
StyI CCWWGG 1 cut(s) 952
TaaI ACNGT 1 cut(s) 46
TaiI ACGT 2 cut(s) 63, 237
TaqI TCGA 4 cut(s) 30, 63, 114, 478
TasI AATT 8 cut(s) 35, 110, 190, 390, 436, 765, 808, 818
TfiI GAWTC 3 cut(s) 133, 480, 542
Tru1I TTAA 6 cut(s) 105, 126, 414, 690, 705, 935
Tru9I TTAA 6 cut(s) 105, 126, 414, 690, 705, 935
TscAI CASTG 1 cut(s) 259
TseFI GTSAC 2 cut(s) 401, 970
TseI GCWGC 1 cut(s) 25
Tsp45I GTSAC 2 cut(s) 401, 970
TspDTI ATGAA 7 cut(s) 344, 386, 447, 516, 555, 711, 831
TspGWI ACGGA 2 cut(s) 224, 371
TspRI CASTG 1 cut(s) 259
Vha464I CTTAAG 1 cut(s) 413
VspI ATTAAT 1 cut(s) 935
XapI RAATTY 3 cut(s) 110, 436, 808
XmnI GAANNNNTTC 1 cut(s) 304
XspI CTAG 1 cut(s) 881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.