RchiOBHm_Chr2g0139881

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
57317314 .. 57320003
2690 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51037

Sequence Viewer

Length: 2607 bp
ATGGCGGATGCACTCATTTCCGTGCTTCTTGAACAACTGGCTTCACTAACTTATGAGTTAATAAAAGGGCAGGTGACATTGGTTTTGGATGTGGAGAAAGACGTTGCAGAGTTCATCAACAATCTCAGAGCAATCCAAGCTGTACTTGAGGATGCAGAGAAGAGGCAAGTGAAGGAAGCTGTCGTGCGAGATTGGTTGGACAAGCTCAAAGATGTCTCCTACAAGATGGATAACGTGGTTGATGAGTGGAACACGGAAATTCTGAAACAGCAAGTTGAGAAACAAGAAAATGAAGGTGAAAATGCTCTTGTTAACAAGAGAAAGGTGCGTTTCTCCATTCCCTCTCCCTGTAAATGCTTTGGTTTCGGCCAAGTCAGTCGGGTTATTGTTAATCGTGCTATTGCTCTGAAAATAAAAGAACTGAATAGTAGGCTAACTTCGATTGCTGAGGAAAGAACAAGGTACCACTTTCAATCCACAACAACAAGTGGCATTGAACAACCTGAACGACCAAAGAGTTCATCTTTGGTCGATGTTTCTAACATATTTGGTAGAGAAGATGAAAAGGAAACCTTGATTAGCATGTTGTTGGGTAAGAGTAGCGGTAAAGAAGGGAGGGGCCCCCTAGTCATCCCTATTATAGGGATGGGGGGCATAGGCAAGACCACTCTTGCACAACTAGCCTACAACAATGAACATGTTAAAGCCCATTTTCAGAAGAGAAAATGGGTTTGTGTCTCAGATCCTTTCGATGGGATCAAGATTGCCAAAACCATCATTGATAAGAATGATACCCCAACTTCAGATGAGTTGGAAGATTTCATGCAATCTGTGTCTAAATCTGTCGGGGGAAAGAGGTTTCTTCTTGTCCTAGATGACATGTGGACCGAAGATGATACAAAGTGGGAACCATTAAGGTTAGCTTTAATGTCTGGTGCTGAAGGCAGTAGAATATTAGTGACCACACGAAACGAATCAGTTGCTCGTATGATGGGAGCAACCACTCAAATTATCCATTTGGAAAAGTTGAATGATCAGCATTGTTTCTCATTATTCTATCATCTTGCATTTCTAAATAGGGAAAAAGATAAGTCTGATTTGTTTGAAGTCATTGGTAAGGAAATTGTTGAGAAGTGTAAGGGTTCGCCACTTGCTGCAAAGACTTTAGGTAGTCTTATGTGGAATAAGAAAACAACGAAAGAATGGTGTGATGTTTTGGAGAGTGAGATATGGGATTTAGAAGAGGTTGAGAAGAAAATTTTTCATCTGTTATTACTAAGTTATTATGATTTGGGATCAGAAATCAAGCGTTGTCTTATATTTTGTGCATGTTTTCCACAAGATTATGAATTCGATAAAAACACATTGATTGAGATGTGGATGTCACAAAATTATCTCAACTCAAAAAAAAACAAGGAGAGGAGAACCATAGGTCAAAATTATTTTGATAACTTAGTAACGCGGTCTTTTTTTCAAGACTTTAAATTAGATGTTAAAGGGAACATTGAAACTTGCAAGATGCATGATATTGTGCATGAGTTTGTAAAGTTTCTTGCCCGGAATGAATCTTTGATTATTGAGGCTGATGGTGCTAACCGATCAACAGAGCTCTCAATTGATAAGGTGTGCCATTTATCTCTAGTGTCAGTAGAGACTGTAGAGGGTCGAATTTCAGTTCCTATTTCATTTCACAAATGCACAAATCTGCGAACCCTCACAACTTATAATTCAGAAATCACAACAATGGGTGGGGATTTAGTTTTGCAATTGAAATGTCTTAGGACGTTAAATTTGAGTGATAGCGAGGTCGATGAACTTCCCAAGGAGATTGGTGAACTGTTACATTTGAGGTATATTGATTTGTCTCATAATAACAGTCTAGAGGAATTACCTGACGCCATGTGTAATTTGTTCAATCTTGAAACCTTGCACATTGAGTATTGCGAATCACTTACAAAACTGCCCAAGGCTATGGGAAAGTTGATCAACTTAAAGCATCTTTATGTTGCTGAATGTGATGAGCTAAAGTACTTGCCGAAAGGGATTGGGAGAATAAGAGGTCTACGTATACTAGATAGGTACACTGTTGTATGTGGTGGTGGTGGTGACGACGACGACAATGAAATACTGAGGTTGGGAGATCTGGCAATCTTTGACCAGCTTCAGGGCAAGATTGTAATTCGAGATTTGGGGGAAGTGATCGATGCTAGTGAGGCTCAGAAAGCACAATTGGAGAAGAAGAAACACCTCCTTGATTTGGTATTAGATTTTGGTGGAGGAGAAGAGGAGCGCCGAAGAAAAAGCGATGTAGAGGTACTGAATGCCTTGCAACCACATCAAAATTTGGAATATTTGGGGATTTCTGACTATGAAGGCACCACGGTGTCTCCAAAATGGTTGATGTCTTTACACCATTTGAGATTTCTTACTCTTATGTCCTGCATGAATTGTGAATGTTTGCCTCCTCTGGGGAGATTACAATCTCTTGAAGTTCTGAGAATAGAAGGCATGAGAGTGGAAAAGGTTGGAATTGAATTCTTAGTGGGAAGGAGTGCGAGGTTGCATGGAAGAAGATTGTCAAGTTGCAATAATGCCGCATCTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

868

Amino Acids

98.69

Weight (kDa)

5.72

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 95 4.7e-20 Rx N-terminal domain
NB-ARC PF00931 187 - 359 4.8e-32 NB-ARC domain
WHD_DRP PF23559 445 - 515 6e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 569 - 842 4.7e-26 Leucine-rich repeat region
LRR_8 PF13855 593 - 648 1e-05 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 713 - 837 3.1e-33 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1725
AarI CACCTGC 1 cut(s) 61
Acc36I ACCTGC 1 cut(s) 61
Acc65I GGTACC 1 cut(s) 462
AccB1I GGYRCC 2 cut(s) 462, 2375
AccI GTMKAC 2 cut(s) 2062, 2068
AccII CGCG 1 cut(s) 1462
AciI CCGC 4 cut(s) 5, 603, 1462, 2595
AclWI GGATC 3 cut(s) 737, 764, 1303
AcoI YGGCCR 1 cut(s) 367
AcsI RAATTY 7 cut(s) 258, 1257, 1349, 1668, 1789, 2341, 2534
AcuI CTGAAG 3 cut(s) 786, 960, 2147
AcyI GRCGYC 1 cut(s) 1896
AfaI GTAC 5 cut(s) 144, 464, 2030, 2081, 2316
AfiI CCNNNNNNNGG 5 cut(s) 641, 752, 2164, 2257, 2468
AflIII ACRYGT 2 cut(s) 697, 879
AjuI GAANNNNNNNTTGG 2 cut(s) 2213, 2245
AleI CACNNNNGTG 1 cut(s) 2381
AluBI AGCT 7 cut(s) 140, 179, 205, 923, 1609, 2023, 2161
AluI AGCT 7 cut(s) 140, 179, 205, 923, 1609, 2023, 2161
Alw21I GWGCWC 1 cut(s) 1611
Alw26I GTCTC 5 cut(s) 220, 742, 1646, 1869, 2391
AlwI GGATC 3 cut(s) 737, 764, 1303
AoxI GGCC 2 cut(s) 367, 619
ApaI GGGCCC 1 cut(s) 623
ApeKI GCWGC 1 cut(s) 1154
ApoI RAATTY 7 cut(s) 258, 1257, 1349, 1668, 1789, 2341, 2534
ArsI GACNNNNNNTTYG 4 cut(s) 67, 99, 1774, 1806
Asp718I GGTACC 1 cut(s) 462
AspLEI GCGC 1 cut(s) 2292
AspS9I GGNCC 3 cut(s) 619, 620, 885
AsuC2I CCSGG 1 cut(s) 1558
AsuHPI GGTGA 4 cut(s) 85, 308, 1844, 2117
AvaII GGWCC 1 cut(s) 885
BaeGI GKGCMC 1 cut(s) 623
BanI GGYRCC 2 cut(s) 462, 2375
BanII GRGCYC 2 cut(s) 623, 1611
BarI GAAGNNNNNNTAC 2 cut(s) 421, 453
Bbv12I GWGCWC 1 cut(s) 1611
BbvCI CCTCAGC 1 cut(s) 447
BbvI GCAGC 1 cut(s) 1141
BccI CCATC 6 cut(s) 220, 640, 746, 782, 985, 1580
BcgI CGANNNNNNTGC 2 cut(s) 962, 996
BclI TGATCA 2 cut(s) 1033, 1983
BcnI CCSGG 1 cut(s) 1558
BcoDI GTCTC 5 cut(s) 220, 742, 1646, 1869, 2391
BfaI CTAG 7 cut(s) 626, 680, 872, 1640, 1880, 2072, 2208
BfmI CTRYAG 1 cut(s) 1656
BfoI RGCGCY 1 cut(s) 2293
BfuAI ACCTGC 1 cut(s) 61
BglII AGATCT 1 cut(s) 2140
BisI GCNGC 2 cut(s) 1155, 2595
BlsI GCNGC 2 cut(s) 1156, 2596
BmcAI AGTACT 1 cut(s) 2030
Bme1390I CCNGG 1 cut(s) 1558
Bme18I GGWCC 1 cut(s) 885
BmgT120I GGNCC 3 cut(s) 619, 620, 885
BmiI GGNNCC 6 cut(s) 464, 620, 621, 622, 909, 2377
BmrFI CCNGG 1 cut(s) 1558
BmsI GCATC 4 cut(s) 142, 1509, 2005, 2194
Bpu10I CCTNAGC 1 cut(s) 447
BpuEI CTTGAG 1 cut(s) 167
BpuMI CCSGG 1 cut(s) 1558
Bsa29I ATCGAT 1 cut(s) 2202
BsaAI YACGTR 1 cut(s) 2066
BsaBI GATNNNNATC 1 cut(s) 2479
BsaHI GRCGYC 1 cut(s) 1896
BsaJI CCNNGG 3 cut(s) 1821, 1965, 2379
BsaXI ACNNNNNCTCC 2 cut(s) 2371, 2401
Bsc4I CCNNNNNNNGG 5 cut(s) 641, 752, 2164, 2257, 2468
Bse1I ACTGG 1 cut(s) 42
Bse8I GATNNNNATC 1 cut(s) 2479
BseCI ATCGAT 1 cut(s) 2202
BseDI CCNNGG 3 cut(s) 1821, 1965, 2379
BseGI GGATG 6 cut(s) 13, 94, 157, 630, 651, 1386
BseJI GATNNNNATC 1 cut(s) 2479
BseLI CCNNNNNNNGG 5 cut(s) 641, 752, 2164, 2257, 2468
BseMII CTCAG 6 cut(s) 139, 438, 753, 2120, 2231, 2486
BseNI ACTGG 1 cut(s) 42
BseRI GAGGAG 4 cut(s) 1435, 2292, 2300, 2454
BseSI GKGCMC 1 cut(s) 623
BseXI GCAGC 1 cut(s) 1141
Bsh1236I CGCG 1 cut(s) 1462
BshFI GGCC 2 cut(s) 369, 621
BshNI GGYRCC 2 cut(s) 462, 2375
BshVI ATCGAT 1 cut(s) 2202
BsiHKAI GWGCWC 1 cut(s) 1611
BsiSI CCGG 1 cut(s) 1558
BslI CCNNNNNNNGG 5 cut(s) 641, 752, 2164, 2257, 2468
BsmAI GTCTC 5 cut(s) 220, 742, 1646, 1869, 2391
BsmI GAATGC 1 cut(s) 2326
BsnI GGCC 2 cut(s) 369, 621
Bsp120I GGGCCC 1 cut(s) 619
Bsp1286I GDGCHC 2 cut(s) 623, 1611
Bsp143I GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
BspACI CCGC 4 cut(s) 5, 603, 1462, 2595
BspANI GGCC 2 cut(s) 369, 621
BspCNI CTCAG 6 cut(s) 138, 439, 752, 2121, 2230, 2487
BspDI ATCGAT 1 cut(s) 2202
BspFNI CGCG 1 cut(s) 1462
BspLI GGNNCC 6 cut(s) 464, 620, 621, 622, 909, 2377
BspMI ACCTGC 1 cut(s) 61
BspPI GGATC 3 cut(s) 737, 764, 1303
BspT107I GGYRCC 2 cut(s) 462, 2375
BsrI ACTGG 1 cut(s) 42
BssECI CCNNGG 3 cut(s) 1821, 1965, 2379
BssMI GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
BssNAI GTATAC 1 cut(s) 2069
BssNI GRCGYC 1 cut(s) 1896
BssT1I CCWWGG 2 cut(s) 1821, 1965
Bst1107I GTATAC 1 cut(s) 2069
Bst4CI ACNGT 5 cut(s) 1657, 1839, 1877, 2086, 2383
Bst6I CTCTTC 4 cut(s) 155, 713, 1236, 2277
BstACI GRCGYC 1 cut(s) 1896
BstBAI YACGTR 1 cut(s) 2066
BstDSI CCRYGG 1 cut(s) 2379
BstENI CCTNNNNNAGG 1 cut(s) 639
BstF5I GGATG 6 cut(s) 13, 94, 157, 630, 651, 1386
BstFNI CGCG 1 cut(s) 1462
BstH2I RGCGCY 1 cut(s) 2293
BstHHI GCGC 1 cut(s) 2292
BstKTI GATC 8 cut(s) 745, 759, 1036, 1298, 1601, 1986, 2143, 2202
BstMAI GTCTC 5 cut(s) 220, 742, 1646, 1869, 2391
BstMBI GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
BstMWI GCNNNNNNNGC 5 cut(s) 137, 680, 1589, 2213, 2222
BstNSI RCATGY 4 cut(s) 586, 701, 883, 1332
BstSCI CCNGG 1 cut(s) 1556
BstSFI CTRYAG 1 cut(s) 1656
BstSLI GKGCMC 1 cut(s) 623
BstSNI TACGTA 1 cut(s) 2066
BstUI CGCG 1 cut(s) 1462
BstV1I GCAGC 1 cut(s) 1141
BstX2I RGATCY 2 cut(s) 742, 2140
BstXI CCANNNNNNTGG 1 cut(s) 1972
BstYI RGATCY 2 cut(s) 742, 2140
BstZ17I GTATAC 1 cut(s) 2069
Bsu15I ATCGAT 1 cut(s) 2202
BsuRI GGCC 2 cut(s) 369, 621
BsuTUI ATCGAT 1 cut(s) 2202
BtgI CCRYGG 1 cut(s) 2379
BtgZI GCGATG 1 cut(s) 2319
BtsCI GGATG 6 cut(s) 13, 94, 157, 630, 651, 1386
BtsIMutI CAGTG 1 cut(s) 2082
BveI ACCTGC 1 cut(s) 61
CfoI GCGC 1 cut(s) 2292
Cfr13I GGNCC 3 cut(s) 619, 620, 885
ClaI ATCGAT 1 cut(s) 2202
CseI GACGC 1 cut(s) 1904
Csp6I GTAC 5 cut(s) 143, 463, 2029, 2080, 2315
CviQI GTAC 5 cut(s) 143, 463, 2029, 2080, 2315
DpnI GATC 8 cut(s) 744, 758, 1035, 1297, 1600, 1985, 2142, 2201
DpnII GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
DraI TTTAAA 1 cut(s) 1483
EaeI YGGCCR 1 cut(s) 367
Eam1104I CTCTTC 4 cut(s) 155, 713, 1236, 2277
EarI CTCTTC 4 cut(s) 155, 713, 1236, 2277
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 1609
Eco105I TACGTA 1 cut(s) 2066
Eco130I CCWWGG 2 cut(s) 1821, 1965
Eco24I GRGCYC 2 cut(s) 623, 1611
Eco47I GGWCC 1 cut(s) 885
Eco53kI GAGCTC 1 cut(s) 1609
Eco57I CTGAAG 3 cut(s) 786, 960, 2147
EcoICRI GAGCTC 1 cut(s) 1609
EcoNI CCTNNNNNAGG 1 cut(s) 639
EcoO109I RGGNCCY 2 cut(s) 619, 620
EcoRI GAATTC 2 cut(s) 1349, 2534
EcoT14I CCWWGG 2 cut(s) 1821, 1965
EcoT22I ATGCAT 1 cut(s) 1524
EcoT38I GRGCYC 2 cut(s) 623, 1611
ErhI CCWWGG 2 cut(s) 1821, 1965
FalI AAGNNNNNCTT 6 cut(s) 129, 161, 557, 589, 907, 939
FbaI TGATCA 2 cut(s) 1033, 1983
FblI GTMKAC 2 cut(s) 2062, 2068
Fnu4HI GCNGC 2 cut(s) 1155, 2595
FokI GGATG 6 cut(s) 20, 101, 164, 617, 658, 1393
FriOI GRGCYC 2 cut(s) 623, 1611
Fsp4HI GCNGC 2 cut(s) 1155, 2595
FspBI CTAG 7 cut(s) 626, 680, 872, 1640, 1880, 2072, 2208
GlaI GCGC 1 cut(s) 2291
GluI GCNGC 2 cut(s) 1155, 2595
HaeII RGCGCY 1 cut(s) 2293
HaeIII GGCC 2 cut(s) 369, 621
HapII CCGG 1 cut(s) 1558
HgaI GACGC 1 cut(s) 1904
HhaI GCGC 1 cut(s) 2292
Hin1I GRCGYC 1 cut(s) 1896
Hin6I GCGC 1 cut(s) 2290
HinP1I GCGC 1 cut(s) 2290
HincII GTYRAC 1 cut(s) 313
HindII GTYRAC 1 cut(s) 313
HinfI GANTC 3 cut(s) 974, 1565, 1946
HpaI GTTAAC 1 cut(s) 313
HpaII CCGG 1 cut(s) 1558
HphI GGTGA 4 cut(s) 85, 308, 1844, 2117
Hpy166II GTNNAC 6 cut(s) 313, 885, 1835, 2063, 2069, 2082
Hpy188III TCNNGA 7 cut(s) 29, 760, 1475, 1880, 1919, 2183, 2486
Hpy8I GTNNAC 6 cut(s) 313, 885, 1835, 2063, 2069, 2082
Hpy99I CGWCG 2 cut(s) 2114, 2117
HpyAV CCTTC 7 cut(s) 166, 287, 605, 935, 2366, 2498, 2541
HpyCH4III ACNGT 5 cut(s) 1657, 1839, 1877, 2086, 2383
HpyCH4IV ACGT 4 cut(s) 102, 234, 1784, 2065
HpyF10VI GCNNNNNNNGC 5 cut(s) 137, 680, 1589, 2213, 2222
HpySE526I ACGT 4 cut(s) 102, 234, 1784, 2065
Hsp92I GRCGYC 1 cut(s) 1896
HspAI GCGC 1 cut(s) 2290
KpnI GGTACC 1 cut(s) 466
Ksp22I TGATCA 2 cut(s) 1033, 1983
KspAI GTTAAC 1 cut(s) 313
Kzo9I GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
LmnI GCTCC 2 cut(s) 995, 2287
Lsp1109I GCAGC 1 cut(s) 1141
LweI GCATC 4 cut(s) 142, 1509, 2005, 2194
MaeI CTAG 7 cut(s) 626, 680, 872, 1640, 1880, 2072, 2208
MaeII ACGT 4 cut(s) 102, 234, 1784, 2065
MaeIII GTNAC 6 cut(s) 73, 958, 1383, 1456, 1839, 2105
MalI GATC 8 cut(s) 744, 758, 1035, 1297, 1600, 1985, 2142, 2201
MboI GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
MfeI CAATTG 3 cut(s) 1614, 1766, 2228
MflI RGATCY 2 cut(s) 742, 2140
MhlI GDGCHC 2 cut(s) 623, 1611
MmeI TCCRAC 3 cut(s) 177, 792, 2506
Mph1103I ATGCAT 1 cut(s) 1524
MslI CAYNNNNRTG 5 cut(s) 20, 1742, 2001, 2381, 2513
MspI CCGG 1 cut(s) 1558
MspR9I CCNGG 1 cut(s) 1558
MunI CAATTG 3 cut(s) 1614, 1766, 2228
Mva1269I GAATGC 1 cut(s) 2326
MvnI CGCG 1 cut(s) 1462
MwoI GCNNNNNNNGC 5 cut(s) 137, 680, 1589, 2213, 2222
NciI CCSGG 1 cut(s) 1558
NdeII GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
NlaIV GGNNCC 6 cut(s) 464, 620, 621, 622, 909, 2377
NmuCI GTSAC 4 cut(s) 73, 958, 1383, 2105
NsiI ATGCAT 1 cut(s) 1524
NspI RCATGY 4 cut(s) 586, 701, 883, 1332
OliI CACNNNNGTG 1 cut(s) 2381
PaqCI CACCTGC 1 cut(s) 61
PciI ACATGT 2 cut(s) 697, 879
PctI GAATGC 1 cut(s) 2326
PfeI GAWTC 3 cut(s) 974, 1565, 1946
PkrI GCNGC 2 cut(s) 1156, 2596
Ppu21I YACGTR 1 cut(s) 2066
PscI ACATGT 2 cut(s) 697, 879
PsiI TTATAA 1 cut(s) 1725
Psp124BI GAGCTC 1 cut(s) 1611
PspN4I GGNNCC 6 cut(s) 464, 620, 621, 622, 909, 2377
PspOMI GGGCCC 1 cut(s) 619
PspPI GGNCC 3 cut(s) 619, 620, 885
PsuI RGATCY 2 cut(s) 742, 2140
RsaI GTAC 5 cut(s) 144, 464, 2030, 2081, 2316
RsaNI GTAC 5 cut(s) 143, 463, 2029, 2080, 2315
RseI CAYNNNNRTG 5 cut(s) 20, 1742, 2001, 2381, 2513
SacI GAGCTC 1 cut(s) 1611
SatI GCNGC 2 cut(s) 1155, 2595
Sau3AI GATC 8 cut(s) 742, 756, 1033, 1295, 1598, 1983, 2140, 2199
Sau96I GGNCC 3 cut(s) 619, 620, 885
ScaI AGTACT 1 cut(s) 2030
ScrFI CCNGG 1 cut(s) 1558
SduI GDGCHC 2 cut(s) 623, 1611
SfaNI GCATC 4 cut(s) 142, 1509, 2005, 2194
SfcI CTRYAG 1 cut(s) 1656
SinI GGWCC 1 cut(s) 885
SmiMI CAYNNNNRTG 5 cut(s) 20, 1742, 2001, 2381, 2513
SmlI CTYRAG 1 cut(s) 146
SmoI CTYRAG 1 cut(s) 146
SnaBI TACGTA 1 cut(s) 2066
SsiI CCGC 4 cut(s) 5, 603, 1462, 2595
SspI AATATT 2 cut(s) 954, 2351
SspMI CTAG 7 cut(s) 626, 680, 872, 1640, 1880, 2072, 2208
SstI GAGCTC 1 cut(s) 1611
StyD4I CCNGG 1 cut(s) 1556
StyI CCWWGG 2 cut(s) 1821, 1965
TaaI ACNGT 5 cut(s) 1657, 1839, 1877, 2086, 2383
TaiI ACGT 4 cut(s) 105, 237, 1787, 2068
TaqI TCGA 8 cut(s) 440, 531, 750, 1353, 1666, 1809, 2182, 2202
TaqII GACCGA 1 cut(s) 902
TatI WGTACW 2 cut(s) 142, 2028
TauI GCSGC 1 cut(s) 2597
TfiI GAWTC 3 cut(s) 974, 1565, 1946
TscAI CASTG 1 cut(s) 2089
TseFI GTSAC 4 cut(s) 73, 958, 1383, 2105
TseI GCWGC 1 cut(s) 1154
Tsp45I GTSAC 4 cut(s) 73, 958, 1383, 2105
TspGWI ACGGA 2 cut(s) 10, 269
TspRI CASTG 1 cut(s) 2089
VpaK11BI GGWCC 1 cut(s) 885
XagI CCTNNNNNAGG 1 cut(s) 639
XapI RAATTY 7 cut(s) 258, 1257, 1349, 1668, 1789, 2341, 2534
XbaI TCTAGA 1 cut(s) 1879
XceI RCATGY 4 cut(s) 586, 701, 883, 1332
XmiI GTMKAC 2 cut(s) 2062, 2068
XspI CTAG 7 cut(s) 626, 680, 872, 1640, 1880, 2072, 2208
ZrmI AGTACT 1 cut(s) 2030
Zsp2I ATGCAT 1 cut(s) 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.