disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 101 | 1.6e-22 | Rx N-terminal domain |
| NB-ARC | PF00931 | 155 - 312 | 1.1e-34 | NB-ARC domain |
| WHD_DRP | PF23559 | 400 - 471 | 3.6e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 521 - 767 | 4.8e-21 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 521 - 577 | 1.6e-06 | Leucine rich repeat |
| LRR_8 | PF13855 | 544 - 599 | 2.4e-07 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 662 - 769 | 6.3e-16 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 327, 1953 |
| AccB1I | GGYRCC | 3 cut(s) | 797, 1958, 2131 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 61 |
| AccII | CGCG | 2 cut(s) | 149, 829 |
| AciI | CCGC | 4 cut(s) | 149, 1045, 1564, 2204 |
| AclI | AACGTT | 2 cut(s) | 1174, 2222 |
| AclWI | GGATC | 3 cut(s) | 1154, 1233, 2279 |
| AcsI | RAATTY | 4 cut(s) | 320, 350, 813, 1814 |
| AcuI | CTGAAG | 2 cut(s) | 27, 1757 |
| AcyI | GRCGYC | 1 cut(s) | 1959 |
| AdeI | CACNNNGTG | 1 cut(s) | 2138 |
| AfaI | GTAC | 4 cut(s) | 221, 303, 609, 1192 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 61, 1426, 2104, 2315, 2381 |
| AgeI | ACCGGT | 1 cut(s) | 1913 |
| AhlI | ACTAGT | 3 cut(s) | 79, 433, 863 |
| AleI | CACNNNNGTG | 1 cut(s) | 795 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 704, 736 |
| AluBI | AGCT | 7 cut(s) | 131, 140, 836, 1577, 1843, 1927, 2245 |
| AluI | AGCT | 7 cut(s) | 131, 140, 836, 1577, 1843, 1927, 2245 |
| Alw21I | GWGCWC | 2 cut(s) | 147, 254 |
| Alw26I | GTCTC | 7 cut(s) | 70, 170, 181, 395, 408, 598, 1889 |
| AlwI | GGATC | 3 cut(s) | 1154, 1233, 2279 |
| AoxI | GGCC | 2 cut(s) | 2167, 2383 |
| ApeKI | GCWGC | 1 cut(s) | 1019 |
| ApoI | RAATTY | 4 cut(s) | 320, 350, 813, 1814 |
| AsiGI | ACCGGT | 1 cut(s) | 1913 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 132, 1125 |
| AspLEI | GCGC | 1 cut(s) | 1961 |
| AspS9I | GGNCC | 4 cut(s) | 1492, 1526, 2167, 2383 |
| AsuC2I | CCSGG | 2 cut(s) | 1482, 2310 |
| AsuHPI | GGTGA | 5 cut(s) | 299, 908, 956, 1496, 1772 |
| AvaII | GGWCC | 2 cut(s) | 1492, 1526 |
| AxyI | CCTNAGG | 1 cut(s) | 802 |
| BanI | GGYRCC | 3 cut(s) | 797, 1958, 2131 |
| BanII | GRGCYC | 1 cut(s) | 774 |
| BauI | CACGAG | 1 cut(s) | 2433 |
| BbsI | GAAGAC | 1 cut(s) | 1061 |
| Bbv12I | GWGCWC | 2 cut(s) | 147, 254 |
| BbvI | GCAGC | 1 cut(s) | 1006 |
| BccI | CCATC | 4 cut(s) | 53, 638, 935, 2379 |
| BciVI | GTATCC | 1 cut(s) | 28 |
| BcnI | CCSGG | 2 cut(s) | 1482, 2310 |
| BcoDI | GTCTC | 7 cut(s) | 70, 170, 181, 395, 408, 598, 1889 |
| BcuI | ACTAGT | 3 cut(s) | 79, 433, 863 |
| BfaI | CTAG | 9 cut(s) | 80, 434, 536, 734, 846, 864, 1596, 1928, 2111 |
| BfoI | RGCGCY | 1 cut(s) | 1962 |
| BfuI | GTATCC | 1 cut(s) | 28 |
| BisI | GCNGC | 1 cut(s) | 1020 |
| BlsI | GCNGC | 1 cut(s) | 1021 |
| Bme1390I | CCNGG | 2 cut(s) | 1482, 2310 |
| Bme18I | GGWCC | 2 cut(s) | 1492, 1526 |
| BmgT120I | GGNCC | 4 cut(s) | 1492, 1526, 2167, 2383 |
| BmiI | GGNNCC | 7 cut(s) | 43, 771, 799, 1527, 1960, 2133, 2168 |
| BmrFI | CCNGG | 2 cut(s) | 1482, 2310 |
| BmrI | ACTGGG | 1 cut(s) | 1159 |
| BmsI | GCATC | 2 cut(s) | 142, 1867 |
| BmuI | ACTGGG | 1 cut(s) | 1159 |
| BpiI | GAAGAC | 1 cut(s) | 1061 |
| Bpu10I | CCTNAGC | 1 cut(s) | 837 |
| BpuEI | CTTGAG | 2 cut(s) | 656, 1669 |
| BpuMI | CCSGG | 2 cut(s) | 1482, 2310 |
| Bsa29I | ATCGAT | 1 cut(s) | 1232 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1158 |
| BsaHI | GRCGYC | 1 cut(s) | 1959 |
| BsaI | GGTCTC | 1 cut(s) | 170 |
| BsaJI | CCNNGG | 2 cut(s) | 1425, 1521 |
| BsaWI | WCCGGW | 1 cut(s) | 1913 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 61, 1426, 2104, 2315, 2381 |
| Bse118I | RCCGGY | 1 cut(s) | 1913 |
| Bse1I | ACTGG | 2 cut(s) | 442, 1165 |
| Bse21I | CCTNAGG | 1 cut(s) | 802 |
| Bse3DI | GCAATG | 4 cut(s) | 858, 927, 1839, 2028 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1158 |
| BseCI | ATCGAT | 1 cut(s) | 1232 |
| BseDI | CCNNGG | 2 cut(s) | 1425, 1521 |
| BseGI | GGATG | 5 cut(s) | 157, 630, 1251, 1435, 2371 |
| BseJI | GATNNNNATC | 1 cut(s) | 1158 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 61, 1426, 2104, 2315, 2381 |
| BseMI | GCAATG | 4 cut(s) | 858, 927, 1839, 2028 |
| BseMII | CTCAG | 6 cut(s) | 390, 609, 765, 816, 851, 2390 |
| BseNI | ACTGG | 2 cut(s) | 442, 1165 |
| BseRI | GAGGAG | 1 cut(s) | 175 |
| BseXI | GCAGC | 1 cut(s) | 1006 |
| BsgI | GTGCAG | 1 cut(s) | 1819 |
| Bsh1236I | CGCG | 2 cut(s) | 149, 829 |
| BshFI | GGCC | 2 cut(s) | 2169, 2385 |
| BshNI | GGYRCC | 3 cut(s) | 797, 1958, 2131 |
| BshTI | ACCGGT | 1 cut(s) | 1913 |
| BshVI | ATCGAT | 1 cut(s) | 1232 |
| BsiHKAI | GWGCWC | 2 cut(s) | 147, 254 |
| BsiSI | CCGG | 3 cut(s) | 1481, 1914, 2309 |
| BsiWI | CGTACG | 1 cut(s) | 219 |
| BslFI | GGGAC | 3 cut(s) | 761, 1987, 2247 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 61, 1426, 2104, 2315, 2381 |
| BsmAI | GTCTC | 7 cut(s) | 70, 170, 181, 395, 408, 598, 1889 |
| BsmBI | CGTCTC | 2 cut(s) | 181, 1889 |
| BsmFI | GGGAC | 3 cut(s) | 761, 1987, 2247 |
| BsmI | GAATGC | 3 cut(s) | 1439, 2229, 2369 |
| BsnI | GGCC | 2 cut(s) | 2169, 2385 |
| Bso31I | GGTCTC | 1 cut(s) | 170 |
| Bsp1286I | GDGCHC | 3 cut(s) | 147, 254, 774 |
| Bsp1407I | TGTACA | 1 cut(s) | 607 |
| Bsp143I | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| BspACI | CCGC | 4 cut(s) | 149, 1045, 1564, 2204 |
| BspANI | GGCC | 2 cut(s) | 2169, 2385 |
| BspCNI | CTCAG | 6 cut(s) | 391, 608, 764, 815, 850, 2389 |
| BspDI | ATCGAT | 1 cut(s) | 1232 |
| BspFNI | CGCG | 2 cut(s) | 149, 829 |
| BspLI | GGNNCC | 7 cut(s) | 43, 771, 799, 1527, 1960, 2133, 2168 |
| BspPI | GGATC | 3 cut(s) | 1154, 1233, 2279 |
| BspT107I | GGYRCC | 3 cut(s) | 797, 1958, 2131 |
| BspTNI | GGTCTC | 1 cut(s) | 170 |
| BsrDI | GCAATG | 4 cut(s) | 858, 927, 1839, 2028 |
| BsrFI | RCCGGY | 1 cut(s) | 1913 |
| BsrGI | TGTACA | 1 cut(s) | 607 |
| BsrI | ACTGG | 2 cut(s) | 442, 1165 |
| BssAI | RCCGGY | 1 cut(s) | 1913 |
| BssECI | CCNNGG | 2 cut(s) | 1425, 1521 |
| BssMI | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| BssNI | GRCGYC | 1 cut(s) | 1959 |
| BssSI | CACGAG | 1 cut(s) | 2433 |
| BssT1I | CCWWGG | 2 cut(s) | 1425, 1521 |
| Bst2BI | CACGAG | 1 cut(s) | 2433 |
| Bst4CI | ACNGT | 9 cut(s) | 118, 619, 794, 1060, 1134, 1332, 1553, 1754, 2240 |
| Bst6I | CTCTTC | 2 cut(s) | 1821, 2310 |
| BstACI | GRCGYC | 1 cut(s) | 1959 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1783 |
| BstAUI | TGTACA | 1 cut(s) | 607 |
| BstC8I | GCNNGC | 4 cut(s) | 147, 194, 1010, 2247 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1424 |
| BstF5I | GGATG | 5 cut(s) | 157, 630, 1251, 1435, 2371 |
| BstFNI | CGCG | 2 cut(s) | 149, 829 |
| BstH2I | RGCGCY | 1 cut(s) | 1962 |
| BstHHI | GCGC | 1 cut(s) | 1961 |
| BstKTI | GATC | 5 cut(s) | 1162, 1210, 1228, 2274, 2303 |
| BstMAI | GTCTC | 7 cut(s) | 70, 170, 181, 395, 408, 598, 1889 |
| BstMBI | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 137, 146, 536, 842, 1783, 2242 |
| BstNSI | RCATGY | 1 cut(s) | 2079 |
| BstSCI | CCNGG | 2 cut(s) | 1480, 2308 |
| BstUI | CGCG | 2 cut(s) | 149, 829 |
| BstV1I | GCAGC | 1 cut(s) | 1006 |
| BstV2I | GAAGAC | 1 cut(s) | 1061 |
| BstX2I | RGATCY | 2 cut(s) | 1159, 2271 |
| BstYI | RGATCY | 2 cut(s) | 1159, 2271 |
| Bsu15I | ATCGAT | 1 cut(s) | 1232 |
| Bsu36I | CCTNAGG | 1 cut(s) | 802 |
| BsuI | GTATCC | 1 cut(s) | 28 |
| BsuRI | GGCC | 2 cut(s) | 2169, 2385 |
| BsuTUI | ATCGAT | 1 cut(s) | 1232 |
| BtsCI | GGATG | 5 cut(s) | 157, 630, 1251, 1435, 2371 |
| BtsIMutI | CAGTG | 4 cut(s) | 252, 799, 1065, 2236 |
| Cac8I | GCNNGC | 4 cut(s) | 147, 194, 1010, 2247 |
| CfoI | GCGC | 1 cut(s) | 1961 |
| Cfr10I | RCCGGY | 1 cut(s) | 1913 |
| Cfr13I | GGNCC | 4 cut(s) | 1492, 1526, 2167, 2383 |
| ClaI | ATCGAT | 1 cut(s) | 1232 |
| CseI | GACGC | 2 cut(s) | 198, 835 |
| Csp6I | GTAC | 4 cut(s) | 220, 302, 608, 1191 |
| CspAI | ACCGGT | 1 cut(s) | 1913 |
| CviAII | CATG | 7 cut(s) | 698, 1118, 1151, 1403, 2076, 2136, 2207 |
| CviQI | GTAC | 4 cut(s) | 220, 302, 608, 1191 |
| DinI | GGCGCC | 1 cut(s) | 1960 |
| DpnI | GATC | 5 cut(s) | 1161, 1209, 1227, 2273, 2302 |
| DpnII | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| DraI | TTTAAA | 1 cut(s) | 961 |
| DraIII | CACNNNGTG | 1 cut(s) | 2138 |
| Eam1104I | CTCTTC | 2 cut(s) | 1821, 2310 |
| EarI | CTCTTC | 2 cut(s) | 1821, 2310 |
| Eco130I | CCWWGG | 2 cut(s) | 1425, 1521 |
| Eco24I | GRGCYC | 1 cut(s) | 774 |
| Eco31I | GGTCTC | 1 cut(s) | 170 |
| Eco32I | GATATC | 1 cut(s) | 1709 |
| Eco47I | GGWCC | 2 cut(s) | 1492, 1526 |
| Eco57I | CTGAAG | 2 cut(s) | 27, 1757 |
| Eco81I | CCTNAGG | 1 cut(s) | 802 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1424 |
| EcoRV | GATATC | 1 cut(s) | 1709 |
| EcoT14I | CCWWGG | 2 cut(s) | 1425, 1521 |
| EcoT38I | GRGCYC | 1 cut(s) | 774 |
| EgeI | GGCGCC | 1 cut(s) | 1960 |
| EheI | GGCGCC | 1 cut(s) | 1960 |
| ErhI | CCWWGG | 2 cut(s) | 1425, 1521 |
| Esp3I | CGTCTC | 2 cut(s) | 181, 1889 |
| FaeI | CATG | 7 cut(s) | 701, 1121, 1154, 1406, 2079, 2139, 2210 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 618, 650, 1245, 1277, 2007, 2039 |
| FaqI | GGGAC | 3 cut(s) | 761, 1987, 2247 |
| FatI | CATG | 7 cut(s) | 697, 1117, 1150, 1402, 2075, 2135, 2206 |
| Fnu4HI | GCNGC | 1 cut(s) | 1020 |
| FokI | GGATG | 5 cut(s) | 164, 617, 1258, 1442, 2358 |
| FriOI | GRGCYC | 1 cut(s) | 774 |
| Fsp4HI | GCNGC | 1 cut(s) | 1020 |
| FspBI | CTAG | 9 cut(s) | 80, 434, 536, 734, 846, 864, 1596, 1928, 2111 |
| GlaI | GCGC | 1 cut(s) | 1960 |
| GluI | GCNGC | 1 cut(s) | 1020 |
| HaeII | RGCGCY | 1 cut(s) | 1962 |
| HaeIII | GGCC | 2 cut(s) | 2169, 2385 |
| HapII | CCGG | 3 cut(s) | 1481, 1914, 2309 |
| HgaI | GACGC | 2 cut(s) | 198, 835 |
| HhaI | GCGC | 1 cut(s) | 1961 |
| Hin1I | GRCGYC | 1 cut(s) | 1959 |
| Hin1II | CATG | 7 cut(s) | 701, 1121, 1154, 1406, 2079, 2139, 2210 |
| Hin6I | GCGC | 1 cut(s) | 1959 |
| HinP1I | GCGC | 1 cut(s) | 1959 |
| HincII | GTYRAC | 2 cut(s) | 1805, 1911 |
| HindII | GTYRAC | 2 cut(s) | 1805, 1911 |
| HpaI | GTTAAC | 1 cut(s) | 1911 |
| HpaII | CCGG | 3 cut(s) | 1481, 1914, 2309 |
| HphI | GGTGA | 5 cut(s) | 299, 908, 956, 1496, 1772 |
| Hpy166II | GTNNAC | 5 cut(s) | 109, 241, 1805, 1911, 2050 |
| Hpy188I | TCNGA | 6 cut(s) | 7, 207, 400, 598, 754, 1723 |
| Hpy8I | GTNNAC | 5 cut(s) | 109, 241, 1805, 1911, 2050 |
| Hpy99I | CGWCG | 1 cut(s) | 829 |
| HpyCH4III | ACNGT | 9 cut(s) | 118, 619, 794, 1060, 1134, 1332, 1553, 1754, 2240 |
| HpyCH4IV | ACGT | 4 cut(s) | 72, 183, 1174, 2222 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 137, 146, 536, 842, 1783, 2242 |
| HpySE526I | ACGT | 4 cut(s) | 72, 183, 1174, 2222 |
| Hsp92I | GRCGYC | 1 cut(s) | 1959 |
| Hsp92II | CATG | 7 cut(s) | 701, 1121, 1154, 1406, 2079, 2139, 2210 |
| HspAI | GCGC | 1 cut(s) | 1959 |
| KasI | GGCGCC | 1 cut(s) | 1958 |
| KspAI | GTTAAC | 1 cut(s) | 1911 |
| Kzo9I | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| LmnI | GCTCC | 2 cut(s) | 249, 769 |
| Lsp1109I | GCAGC | 1 cut(s) | 1006 |
| LweI | GCATC | 2 cut(s) | 142, 1867 |
| MaeI | CTAG | 9 cut(s) | 80, 434, 536, 734, 846, 864, 1596, 1928, 2111 |
| MaeII | ACGT | 4 cut(s) | 72, 183, 1174, 2222 |
| MaeIII | GTNAC | 6 cut(s) | 820, 866, 1145, 1248, 1324, 1476 |
| MalI | GATC | 5 cut(s) | 1161, 1209, 1227, 2273, 2302 |
| MboI | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| MfeI | CAATTG | 2 cut(s) | 384, 2266 |
| MflI | RGATCY | 2 cut(s) | 1159, 2271 |
| MhlI | GDGCHC | 3 cut(s) | 147, 254, 774 |
| Mly113I | GGCGCC | 1 cut(s) | 1959 |
| MlyI | GAGTC | 6 cut(s) | 671, 695, 743, 1561, 2029, 2051 |
| MmeI | TCCRAC | 3 cut(s) | 79, 654, 2391 |
| MroXI | GAANNNNTTC | 2 cut(s) | 132, 1125 |
| MseI | TTAA | 6 cut(s) | 645, 960, 1452, 1508, 1853, 1910 |
| MslI | CAYNNNNRTG | 3 cut(s) | 795, 1863, 1944 |
| MspA1I | CMGCKG | 1 cut(s) | 2245 |
| MspI | CCGG | 3 cut(s) | 1481, 1914, 2309 |
| MspR9I | CCNGG | 2 cut(s) | 1482, 2310 |
| MunI | CAATTG | 2 cut(s) | 384, 2266 |
| Mva1269I | GAATGC | 3 cut(s) | 1439, 2229, 2369 |
| MvnI | CGCG | 2 cut(s) | 149, 829 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 137, 146, 536, 842, 1783, 2242 |
| NarI | GGCGCC | 1 cut(s) | 1959 |
| NciI | CCSGG | 2 cut(s) | 1482, 2310 |
| NdeII | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| NlaIII | CATG | 7 cut(s) | 701, 1121, 1154, 1406, 2079, 2139, 2210 |
| NlaIV | GGNNCC | 7 cut(s) | 43, 771, 799, 1527, 1960, 2133, 2168 |
| NmuCI | GTSAC | 3 cut(s) | 820, 866, 1248 |
| NspI | RCATGY | 1 cut(s) | 2079 |
| OliI | CACNNNNGTG | 1 cut(s) | 795 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 228 |
| PctI | GAATGC | 3 cut(s) | 1439, 2229, 2369 |
| PdmI | GAANNNNTTC | 2 cut(s) | 132, 1125 |
| PfeI | GAWTC | 6 cut(s) | 395, 1358, 1583, 1874, 2054, 2349 |
| Pfl23II | CGTACG | 1 cut(s) | 219 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 61 |
| PinAI | ACCGGT | 1 cut(s) | 1913 |
| PkrI | GCNGC | 1 cut(s) | 1021 |
| PleI | GAGTC | 6 cut(s) | 670, 695, 743, 1561, 2028, 2050 |
| PluTI | GGCGCC | 1 cut(s) | 1962 |
| PpsI | GAGTC | 6 cut(s) | 670, 695, 743, 1561, 2028, 2050 |
| PsiI | TTATAA | 2 cut(s) | 327, 1953 |
| Psp1406I | AACGTT | 2 cut(s) | 1174, 2222 |
| PspLI | CGTACG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 7 cut(s) | 43, 771, 799, 1527, 1960, 2133, 2168 |
| PspPI | GGNCC | 4 cut(s) | 1492, 1526, 2167, 2383 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 591, 623 |
| PsuI | RGATCY | 2 cut(s) | 1159, 2271 |
| PvuII | CAGCTG | 1 cut(s) | 2245 |
| RsaI | GTAC | 4 cut(s) | 221, 303, 609, 1192 |
| RsaNI | GTAC | 4 cut(s) | 220, 302, 608, 1191 |
| RseI | CAYNNNNRTG | 3 cut(s) | 795, 1863, 1944 |
| SaqAI | TTAA | 6 cut(s) | 645, 960, 1452, 1508, 1853, 1910 |
| SatI | GCNGC | 1 cut(s) | 1020 |
| Sau3AI | GATC | 5 cut(s) | 1159, 1207, 1225, 2271, 2300 |
| Sau96I | GGNCC | 4 cut(s) | 1492, 1526, 2167, 2383 |
| SchI | GAGTC | 6 cut(s) | 671, 695, 743, 1561, 2029, 2051 |
| ScrFI | CCNGG | 2 cut(s) | 1482, 2310 |
| SduI | GDGCHC | 3 cut(s) | 147, 254, 774 |
| SfaNI | GCATC | 2 cut(s) | 142, 1867 |
| SfoI | GGCGCC | 1 cut(s) | 1960 |
| SinI | GGWCC | 2 cut(s) | 1492, 1526 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 795, 1863, 1944 |
| SmlI | CTYRAG | 2 cut(s) | 635, 1648 |
| SmoI | CTYRAG | 2 cut(s) | 635, 1648 |
| SpeI | ACTAGT | 3 cut(s) | 79, 433, 863 |
| SsiI | CCGC | 4 cut(s) | 149, 1045, 1564, 2204 |
| SspDI | GGCGCC | 1 cut(s) | 1958 |
| SspI | AATATT | 1 cut(s) | 1372 |
| SspMI | CTAG | 9 cut(s) | 80, 434, 536, 734, 846, 864, 1596, 1928, 2111 |
| StyD4I | CCNGG | 2 cut(s) | 1480, 2308 |
| StyI | CCWWGG | 2 cut(s) | 1425, 1521 |
| TaaI | ACNGT | 9 cut(s) | 118, 619, 794, 1060, 1134, 1332, 1553, 1754, 2240 |
| TaiI | ACGT | 4 cut(s) | 75, 186, 1177, 2225 |
| TaqI | TCGA | 8 cut(s) | 126, 390, 1232, 1586, 1661, 2057, 2299, 2324 |
| TaqII | GACCGA | 1 cut(s) | 900 |
| TatI | WGTACW | 2 cut(s) | 607, 1190 |
| TfiI | GAWTC | 6 cut(s) | 395, 1358, 1583, 1874, 2054, 2349 |
| Tru1I | TTAA | 6 cut(s) | 645, 960, 1452, 1508, 1853, 1910 |
| Tru9I | TTAA | 6 cut(s) | 645, 960, 1452, 1508, 1853, 1910 |
| TscAI | CASTG | 4 cut(s) | 259, 799, 1065, 2243 |
| TseFI | GTSAC | 3 cut(s) | 820, 866, 1248 |
| TseI | GCWGC | 1 cut(s) | 1019 |
| Tsp45I | GTSAC | 3 cut(s) | 820, 866, 1248 |
| TspGWI | ACGGA | 1 cut(s) | 1484 |
| TspRI | CASTG | 4 cut(s) | 259, 799, 1065, 2243 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 61 |
| VpaK11BI | GGWCC | 2 cut(s) | 1492, 1526 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1424 |
| XapI | RAATTY | 4 cut(s) | 320, 350, 813, 1814 |
| XbaI | TCTAGA | 1 cut(s) | 733 |
| XceI | RCATGY | 1 cut(s) | 2079 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2035, 2142 |
| XmnI | GAANNNNTTC | 2 cut(s) | 132, 1125 |
| XspI | CTAG | 9 cut(s) | 80, 434, 536, 734, 846, 864, 1596, 1928, 2111 |