RchiOBHm_Chr5g0003421

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
2140784 .. 2143630
2847 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28473

Sequence Viewer

Length: 2847 bp
ATGGCTGAGGCACTCATTTTGATGCTTCTAGAGAAATTGGCTTCTGTAACTATTCAACTCACAGAAAAAAAGGTGAGACTGGTTTTGGATGTTGAGAAAGAAGTTGAAGAATTCACTGGAAATCTTGAAGCAATTCAAGCTGTGCTTGAGGATGCAGAGCAGAAGCAAGTCAAGGATGCAAGCGTGAGGAATTGGCTGGATAAGCTCAAGGAAGTGTCCTTTAAGATGGATGACGTGCTGGATGAGTGGAACACTGAAATTTTGAGACAAAAAGTTGAGAATCAAGAAACACACAATGAAACTGCTCTTGTTACCAAGAAGAAGGTATGGATCTCTATACCCTCCCATTGCTTTTGTTTTGGTCAAGTCAGTAGGGTAAGTCTTCGTCGTGATATTGCACTCATCATAAAAGATCTGAATGATAAGCTAACTGTCATTGCTAATCAAAGGCAAGCATATAACTTGCAATCCATAGAAAGAAGCGCGGAACAACCTGAGCGAAACAAGAGTTCATCTTTTGTTGATATATCCAAAGTTTTTGGTCGTGACAATGAAAAAGATATTTTGATAAGCAGATTGTTGAGTGAGAATAGTCAAGAAGAGAGGGCGCTCCTTGTCATCCCTATCATAGGCATGGGAGGAGTTGGTAAGACAACTCTTACCCAACTAGTGTATAATGATGAAAATGTTAAATCCCATTTTGAGATGAGAATATGGGTTTGTGTCTCCGACCCTTTTGATGAGATCAAGATTGCCAAAGCCATTACTGATGGTAATGGTGTTTCAAATTCAGATGAGTTAGAAGCTGTCTTGCAATGCATGTCTAAATCCATTGAGGGGAAAAAGTTTCTCCTTGTCCTAGATGATGTATGGACCCAAAATCATACAAAGTGGGAACAGTTAGAGTTACCTTTAATGAAGAATTGTGGTAAAGGTAGTAGAATAATTGTGACCACAAGAAAAGAGGAGGTCGCTATTATGATGGGAGCAACCCCTCAAATGATGCACTTGAACCAGTTGAGTATGCAAAATTGCTTGTCATTGTTCAATCACATTGCGTTTCTTGATAGGAAAGAGGATGTGTCTACTGTCTTCCGAGCTATTGGTGAGGGAATTGTGAAAAAATGTAAGGGTTTGCCACTTGCTGCAAAGACTTTGGCGAGCCTCATGCGCTATAGGAAGACGATGAAAGAGTGGCAAGATGTTTTGGACTGTAAGATTTGGGATATAGAAGGGTTTGAGCAACAAGTTTTTCAACCACTTTTTCTCAGTTATCATGATTTGGCCCCTGCTGTCAGACGTTGTCTGTTATACTGTGCTACTTTTCCAAAAGATTATGTGTTCGACAAAAATATCTTGATTGAGCTCTGGATGTCACAAGACTATCTTCATTCAAGAGGGAACCATGAAAAAGAAGTCGTTGGTCAGATCTTTTTTGATAACTTAGTAATGCGCTCTTTCTTCCAAGATCTTGTGGATGATGAATTTGACAAGCTTACTATGCGCTGCAAAATGCATGATATTGTTCATGACTTTGTGCAGTCCCTCACTGAGAAAGAGTGTGTCATTATGGAGTTATCTGGTGCTAGCGACAAAACAGAGCCACTAGTGAGTAATAAGTTGCGCCATTTCACCTTAATGTCTGCACCTGAGTTCCCATCTTCTATGCCATCTCAGAATTACAAGAATCTGCGTACTCTCACAACTTTTAATTGCAAAATTTCTGCCATAGACTCGAAGTTAATTTCAGAACTGAGATGTCTAAGAACATTAAATTTGTGTCACAATGGCCTCCAAGAGCTTCCAGAGAACATTGGTGATTTGCTACATTTGAGGTATCTTGACTTGTCTTTTAATCGTTCTTTGAAGAAATTACCCACCACTTTAGGTAATTTATTCAATCTGCAAACCTTGCGCCTTCTGCGCTGCAGGGCACTTAAAGAACTCCCTAAGAGCATGGGAAAGCTGATTAGCCTGAGACATCTTTACATTCAGTTTTGTGATCAGCTGAAGTACTTGCCAAAAGGGATTGGCAGATTAACAAGCTTGCAAACACTAGACATGTGCCCTGTTTATGGCAGTGAAGATGATGAAGCATTCAAGTTGGGGGATTTGGGAAGCTTGGATCAGCTTCAGGGTGCTCTCACCATAAAAGTTTTGGGGGATTGGAAGCATGCAAATGAGGCTGAGAATGCCCGTTTGTGGAATAAAAAACAACTTTTTTATTTGGGAGTTGATACTTCCGATGACAACATGAGTAGAAAAAGCAATGTGAAGATTTTGAATCTCTTACGACCACATCAAGATTTAAATTCTTTAGAGATTTCTGTGTATAATGGCACCACCTGGCCTCATTGGATAATGTCTTTGTACAATTTGAGAGTACTTAGTCTTGATTCTTGTGAGTGTGAGTTTTTGCCTCCTCTTGGGAAATTGCCATTCCTTGAGAAGCTGTCAGTGAGCTATATGGCAAGACTGAAAAAGGTTGGAGTTGAATTTCTGGGAATAGAAGAAGCTCAAACATCAATGAAATCATCTAAACGTACTGTTTTGTTCCCAAAATTAAAACAACTCCTGTTTTGGCGATTGGTGGAGTTGGAAGAGTGGAACGGAATGGAAGGGTGGAAAGAAGAAGATTCTGACATTACAATAATGCCATGCCTTTCTAGCTTAAGAATTATGGACTGCAGCAATTTGAGGCTTCTGCCAGACTTCTTGCAAAGATCCCAACTGCAGAGTCTTGAAATCATTGGAAGTTGGATTCTTGCCAGATGTTGTGAAGAAGGCAGAGGAAGGGAGTGGCCCAAGATCTCTCATATCCGAAACATCAAAGTTGAATACCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

948

Amino Acids

109.18

Weight (kDa)

6.34

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 96 1.2e-21 Rx N-terminal domain
NB-ARC PF00931 185 - 355 4.4e-33 NB-ARC domain
WHD_DRP PF23559 442 - 513 3.7e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 564 - 896 8.2e-34 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 702 - 823 2.1e-26 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 789 - 916 3.2e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2339
AccI GTMKAC 1 cut(s) 1085
AccII CGCG 1 cut(s) 485
AciI CCGC 1 cut(s) 485
AclWI GGATC 3 cut(s) 338, 2133, 2718
AcsI RAATTY 8 cut(s) 110, 258, 787, 1484, 1719, 1774, 2311, 2495
AcuI CTGAAG 2 cut(s) 2030, 2117
AfaI GTAC 5 cut(s) 1696, 2015, 2372, 2385, 2545
AfiI CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
AflII CTTAAG 1 cut(s) 2671
AflIII ACRYGT 1 cut(s) 2061
AhlI ACTAGT 2 cut(s) 667, 1606
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 2345
Alw21I GWGCWC 2 cut(s) 1368, 2143
Alw26I GTCTC 4 cut(s) 70, 259, 730, 1972
AlwI GGATC 3 cut(s) 338, 2133, 2718
AoxI GGCC 4 cut(s) 1284, 1789, 2348, 2801
ApeKI GCWGC 4 cut(s) 1145, 1506, 1926, 2688
ApoI RAATTY 8 cut(s) 110, 258, 787, 1484, 1719, 1774, 2311, 2495
Asp700I GAANNNNTTC 1 cut(s) 132
AspLEI GCGC 8 cut(s) 485, 610, 1173, 1455, 1506, 1626, 1917, 1926
AspS9I GGNCC 3 cut(s) 873, 1285, 2802
AsuHPI GGTGA 5 cut(s) 85, 1118, 1624, 1829, 2137
AsuNHI GCTAGC 1 cut(s) 1586
AvaII GGWCC 1 cut(s) 873
BaeGI GKGCMC 2 cut(s) 1936, 2069
BanI GGYRCC 1 cut(s) 2339
BanII GRGCYC 1 cut(s) 1368
BbsI GAAGAC 3 cut(s) 374, 1084, 1187
Bbv12I GWGCWC 2 cut(s) 1368, 2143
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 4 cut(s) 1132, 1493, 1913, 2700
BccI CCATC 5 cut(s) 220, 764, 976, 1666, 1678
BcgI CGANNNNNNTGC 2 cut(s) 1150, 1184
BciT130I CCWGG 1 cut(s) 2347
BclI TGATCA 1 cut(s) 2002
BcoDI GTCTC 4 cut(s) 70, 259, 730, 1972
BcuI ACTAGT 2 cut(s) 667, 1606
BfaI CTAG 7 cut(s) 29, 668, 860, 1587, 1607, 2057, 2667
BfmI CTRYAG 4 cut(s) 1174, 1927, 2686, 2732
BfoI RGCGCY 1 cut(s) 611
BfrI CTTAAG 1 cut(s) 2671
BglII AGATCT 4 cut(s) 412, 1428, 1468, 2808
BisI GCNGC 4 cut(s) 1146, 1507, 1927, 2689
BlsI GCNGC 4 cut(s) 1147, 1508, 1928, 2690
BmcAI AGTACT 2 cut(s) 2015, 2385
Bme1390I CCNGG 1 cut(s) 2347
Bme18I GGWCC 1 cut(s) 873
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 3 cut(s) 873, 1285, 2802
BmiI GGNNCC 4 cut(s) 875, 1287, 1403, 2341
BmrFI CCNGG 1 cut(s) 2347
BmsI GCATC 4 cut(s) 12, 142, 166, 993
BmtI GCTAGC 1 cut(s) 1590
BpiI GAAGAC 3 cut(s) 374, 1084, 1187
Bpu10I CCTNAGC 2 cut(s) 6, 495
BpuEI CTTGAG 3 cut(s) 167, 191, 2465
Bsc4I CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
Bse1I ACTGG 3 cut(s) 84, 121, 1015
Bse3DI GCAATG 5 cut(s) 346, 435, 821, 1053, 2275
BseBI CCWGG 1 cut(s) 2347
BseGI GGATG 9 cut(s) 94, 157, 181, 235, 247, 618, 1084, 1377, 1483
BseLI CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
BseMI GCAATG 5 cut(s) 346, 435, 821, 1053, 2275
BseMII CTCAG 8 cut(s) 486, 1282, 1542, 1641, 1688, 1745, 1967, 2178
BseNI ACTGG 3 cut(s) 84, 121, 1015
BseRI GAGGAG 3 cut(s) 654, 980, 2412
BseSI GKGCMC 2 cut(s) 1936, 2069
BseXI GCAGC 4 cut(s) 1132, 1493, 1913, 2700
BsgI GTGCAG 2 cut(s) 1559, 1629
Bsh1236I CGCG 1 cut(s) 485
BshFI GGCC 4 cut(s) 1286, 1791, 2350, 2803
BshNI GGYRCC 1 cut(s) 2339
BsiHKAI GWGCWC 2 cut(s) 1368, 2143
BslFI GGGAC 1 cut(s) 1528
BslI CCNNNNNNNGG 5 cut(s) 629, 837, 2075, 2202, 2426
BsmAI GTCTC 4 cut(s) 70, 259, 730, 1972
BsmFI GGGAC 1 cut(s) 1528
BsmI GAATGC 2 cut(s) 2096, 2197
BsnI GGCC 4 cut(s) 1286, 1791, 2350, 2803
Bsp1286I GDGCHC 4 cut(s) 1368, 1936, 2069, 2143
Bsp1407I TGTACA 1 cut(s) 2370
Bsp143I GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
BspACI CCGC 1 cut(s) 485
BspANI GGCC 4 cut(s) 1286, 1791, 2350, 2803
BspCNI CTCAG 8 cut(s) 487, 1281, 1543, 1642, 1687, 1746, 1968, 2179
BspFNI CGCG 1 cut(s) 485
BspHI TCATGA 2 cut(s) 1276, 1528
BspLI GGNNCC 4 cut(s) 875, 1287, 1403, 2341
BspMAI CTGCAG 3 cut(s) 1931, 2690, 2736
BspOI GCTAGC 1 cut(s) 1590
BspPI GGATC 3 cut(s) 338, 2133, 2718
BspT107I GGYRCC 1 cut(s) 2339
BspTI CTTAAG 1 cut(s) 2671
BsrDI GCAATG 5 cut(s) 346, 435, 821, 1053, 2275
BsrGI TGTACA 1 cut(s) 2370
BsrI ACTGG 3 cut(s) 84, 121, 1015
BssMI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
Bst2UI CCWGG 1 cut(s) 2347
Bst4CI ACNGT 6 cut(s) 433, 900, 1090, 1214, 1316, 2548
Bst6I CTCTTC 2 cut(s) 594, 2595
BstAFI CTTAAG 1 cut(s) 2671
BstAPI GCANNNNNTGC 1 cut(s) 1912
BstAUI TGTACA 1 cut(s) 2370
BstC8I GCNNGC 6 cut(s) 181, 453, 1162, 1588, 2048, 2175
BstENI CCTNNNNNAGG 1 cut(s) 627
BstF5I GGATG 9 cut(s) 94, 157, 181, 235, 247, 618, 1084, 1377, 1483
BstFNI CGCG 1 cut(s) 485
BstH2I RGCGCY 1 cut(s) 611
BstHHI GCGC 8 cut(s) 485, 610, 1173, 1455, 1506, 1626, 1917, 1926
BstKTI GATC 9 cut(s) 333, 415, 747, 1431, 1471, 2005, 2128, 2726, 2811
BstMAI GTCTC 4 cut(s) 70, 259, 730, 1972
BstMBI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
BstNI CCWGG 1 cut(s) 2347
BstNSI RCATGY 3 cut(s) 823, 2065, 2177
BstSCI CCNGG 1 cut(s) 2345
BstSFI CTRYAG 4 cut(s) 1174, 1927, 2686, 2732
BstSLI GKGCMC 2 cut(s) 1936, 2069
BstUI CGCG 1 cut(s) 485
BstV1I GCAGC 4 cut(s) 1132, 1493, 1913, 2700
BstV2I GAAGAC 3 cut(s) 374, 1084, 1187
BstX2I RGATCY 6 cut(s) 330, 412, 1428, 1468, 2723, 2808
BstYI RGATCY 6 cut(s) 330, 412, 1428, 1468, 2723, 2808
BsuRI GGCC 4 cut(s) 1286, 1791, 2350, 2803
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 9 cut(s) 94, 157, 181, 235, 247, 618, 1084, 1377, 1483
BtsI GCAGTG 1 cut(s) 2086
BtsIMutI CAGTG 5 cut(s) 114, 252, 1548, 2086, 2463
Cac8I GCNNGC 6 cut(s) 181, 453, 1162, 1588, 2048, 2175
CciI TCATGA 2 cut(s) 1276, 1528
CfoI GCGC 8 cut(s) 485, 610, 1173, 1455, 1506, 1626, 1917, 1926
Cfr13I GGNCC 3 cut(s) 873, 1285, 2802
Csp6I GTAC 5 cut(s) 1695, 2014, 2371, 2384, 2544
CviQI GTAC 5 cut(s) 1695, 2014, 2371, 2384, 2544
DpnI GATC 9 cut(s) 332, 414, 746, 1430, 1470, 2004, 2127, 2725, 2810
DpnII GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
DraI TTTAAA 1 cut(s) 2310
Eam1104I CTCTTC 2 cut(s) 594, 2595
EarI CTCTTC 2 cut(s) 594, 2595
Ecl136II GAGCTC 1 cut(s) 1366
Eco24I GRGCYC 1 cut(s) 1368
Eco47I GGWCC 1 cut(s) 873
Eco53kI GAGCTC 1 cut(s) 1366
Eco57I CTGAAG 2 cut(s) 2030, 2117
EcoICRI GAGCTC 1 cut(s) 1366
EcoNI CCTNNNNNAGG 1 cut(s) 627
EcoRI GAATTC 1 cut(s) 110
EcoRII CCWGG 1 cut(s) 2345
EcoT22I ATGCAT 2 cut(s) 821, 1518
EcoT38I GRGCYC 1 cut(s) 1368
FalI AAGNNNNNCTT 4 cut(s) 129, 161, 1371, 1403
FaqI GGGAC 1 cut(s) 1528
FbaI TGATCA 1 cut(s) 2002
FblI GTMKAC 1 cut(s) 1085
Fnu4HI GCNGC 4 cut(s) 1146, 1507, 1927, 2689
FokI GGATG 9 cut(s) 101, 164, 188, 242, 254, 605, 1091, 1384, 1490
FriOI GRGCYC 1 cut(s) 1368
Fsp4HI GCNGC 4 cut(s) 1146, 1507, 1927, 2689
FspBI CTAG 7 cut(s) 29, 668, 860, 1587, 1607, 2057, 2667
GlaI GCGC 8 cut(s) 484, 609, 1172, 1454, 1505, 1625, 1916, 1925
GluI GCNGC 4 cut(s) 1146, 1507, 1927, 2689
HaeII RGCGCY 1 cut(s) 611
HaeIII GGCC 4 cut(s) 1286, 1791, 2350, 2803
HhaI GCGC 8 cut(s) 485, 610, 1173, 1455, 1506, 1626, 1917, 1926
Hin6I GCGC 8 cut(s) 483, 608, 1171, 1453, 1504, 1624, 1915, 1924
HinP1I GCGC 8 cut(s) 483, 608, 1171, 1453, 1504, 1624, 1915, 1924
HindIII AAGCTT 3 cut(s) 1493, 2044, 2119
HinfI GANTC 8 cut(s) 280, 1687, 1733, 2284, 2396, 2636, 2737, 2761
HphI GGTGA 5 cut(s) 85, 1118, 1624, 1829, 2137
Hpy166II GTNNAC 1 cut(s) 1086
Hpy8I GTNNAC 1 cut(s) 1086
Hpy99I CGWCG 1 cut(s) 390
HpyAV CCTTC 6 cut(s) 316, 1226, 1928, 2612, 2777, 2787
HpyCH4III ACNGT 6 cut(s) 433, 900, 1090, 1214, 1316, 2548
HpyCH4IV ACGT 3 cut(s) 234, 1300, 2542
HpySE526I ACGT 3 cut(s) 234, 1300, 2542
HspAI GCGC 8 cut(s) 483, 608, 1171, 1453, 1504, 1624, 1915, 1924
Ksp22I TGATCA 1 cut(s) 2002
Kzo9I GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
LmnI GCTCC 2 cut(s) 615, 986
Lsp1109I GCAGC 4 cut(s) 1132, 1493, 1913, 2700
LweI GCATC 4 cut(s) 12, 142, 166, 993
MaeI CTAG 7 cut(s) 29, 668, 860, 1587, 1607, 2057, 2667
MaeII ACGT 3 cut(s) 234, 1300, 2542
MaeIII GTNAC 7 cut(s) 46, 310, 545, 906, 949, 1374, 1781
MalI GATC 9 cut(s) 332, 414, 746, 1430, 1470, 2004, 2127, 2725, 2810
MboI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
MflI RGATCY 6 cut(s) 330, 412, 1428, 1468, 2723, 2808
MhlI GDGCHC 4 cut(s) 1368, 1936, 2069, 2143
MlyI GAGTC 2 cut(s) 1727, 2746
MmeI TCCRAC 4 cut(s) 753, 2467, 2577, 2738
Mph1103I ATGCAT 2 cut(s) 821, 1518
MroXI GAANNNNTTC 1 cut(s) 132
MslI CAYNNNNRTG 4 cut(s) 20, 632, 1637, 2178
MspA1I CMGCKG 1 cut(s) 2008
MspCI CTTAAG 1 cut(s) 2671
MspR9I CCNGG 1 cut(s) 2347
Mva1269I GAATGC 2 cut(s) 2096, 2197
MvaI CCWGG 1 cut(s) 2347
MvnI CGCG 1 cut(s) 485
NdeII GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
NheI GCTAGC 1 cut(s) 1586
NlaIV GGNNCC 4 cut(s) 875, 1287, 1403, 2341
NmuCI GTSAC 4 cut(s) 545, 949, 1374, 1781
NsiI ATGCAT 2 cut(s) 821, 1518
NspI RCATGY 3 cut(s) 823, 2065, 2177
PaeI GCATGC 1 cut(s) 2177
PagI TCATGA 2 cut(s) 1276, 1528
PciI ACATGT 1 cut(s) 2061
PctI GAATGC 2 cut(s) 2096, 2197
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 6 cut(s) 280, 1687, 2284, 2396, 2636, 2761
PflFI GACNNNGTC 1 cut(s) 1302
PkrI GCNGC 4 cut(s) 1147, 1508, 1928, 2690
PleI GAGTC 2 cut(s) 1727, 2745
PpsI GAGTC 2 cut(s) 1727, 2745
PscI ACATGT 1 cut(s) 2061
Psp124BI GAGCTC 1 cut(s) 1368
Psp6I CCWGG 1 cut(s) 2345
PspGI CCWGG 1 cut(s) 2345
PspN4I GGNNCC 4 cut(s) 875, 1287, 1403, 2341
PspPI GGNCC 3 cut(s) 873, 1285, 2802
PstI CTGCAG 3 cut(s) 1931, 2690, 2736
PsuI RGATCY 6 cut(s) 330, 412, 1428, 1468, 2723, 2808
PsyI GACNNNGTC 1 cut(s) 1302
PvuII CAGCTG 1 cut(s) 2008
RsaI GTAC 5 cut(s) 1696, 2015, 2372, 2385, 2545
RsaNI GTAC 5 cut(s) 1695, 2014, 2371, 2384, 2544
RseI CAYNNNNRTG 4 cut(s) 20, 632, 1637, 2178
SacI GAGCTC 1 cut(s) 1368
SatI GCNGC 4 cut(s) 1146, 1507, 1927, 2689
Sau3AI GATC 9 cut(s) 330, 412, 744, 1428, 1468, 2002, 2125, 2723, 2808
Sau96I GGNCC 3 cut(s) 873, 1285, 2802
ScaI AGTACT 2 cut(s) 2015, 2385
SchI GAGTC 2 cut(s) 1727, 2746
ScrFI CCNGG 1 cut(s) 2347
SduI GDGCHC 4 cut(s) 1368, 1936, 2069, 2143
SfaNI GCATC 4 cut(s) 12, 142, 166, 993
SfcI CTRYAG 4 cut(s) 1174, 1927, 2686, 2732
SinI GGWCC 1 cut(s) 873
SmiI ATTTAAAT 1 cut(s) 2310
SmiMI CAYNNNNRTG 4 cut(s) 20, 632, 1637, 2178
SmlI CTYRAG 4 cut(s) 146, 206, 2444, 2671
SmoI CTYRAG 4 cut(s) 146, 206, 2444, 2671
SpeI ACTAGT 2 cut(s) 667, 1606
SphI GCATGC 1 cut(s) 2177
SsiI CCGC 1 cut(s) 485
SspMI CTAG 7 cut(s) 29, 668, 860, 1587, 1607, 2057, 2667
SstI GAGCTC 1 cut(s) 1368
StyD4I CCNGG 1 cut(s) 2345
SwaI ATTTAAAT 1 cut(s) 2310
TaaI ACNGT 6 cut(s) 433, 900, 1090, 1214, 1316, 2548
TaiI ACGT 3 cut(s) 237, 1303, 2545
TaqI TCGA 2 cut(s) 1344, 1736
TatI WGTACW 3 cut(s) 2013, 2370, 2383
TfiI GAWTC 6 cut(s) 280, 1687, 2284, 2396, 2636, 2761
TscAI CASTG 5 cut(s) 121, 259, 1555, 2086, 2463
TseFI GTSAC 4 cut(s) 545, 949, 1374, 1781
TseI GCWGC 4 cut(s) 1145, 1506, 1926, 2688
Tsp45I GTSAC 4 cut(s) 545, 949, 1374, 1781
TspGWI ACGGA 1 cut(s) 2625
TspRI CASTG 5 cut(s) 121, 259, 1555, 2086, 2463
Tth111I GACNNNGTC 1 cut(s) 1302
Vha464I CTTAAG 1 cut(s) 2671
VpaK11BI GGWCC 1 cut(s) 873
XagI CCTNNNNNAGG 1 cut(s) 627
XapI RAATTY 8 cut(s) 110, 258, 787, 1484, 1719, 1774, 2311, 2495
XbaI TCTAGA 1 cut(s) 28
XceI RCATGY 3 cut(s) 823, 2065, 2177
XcmI CCANNNNNNNNNTGG 1 cut(s) 2155
XmiI GTMKAC 1 cut(s) 1085
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 7 cut(s) 29, 668, 860, 1587, 1607, 2057, 2667
ZrmI AGTACT 2 cut(s) 2015, 2385
Zsp2I ATGCAT 2 cut(s) 821, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.