disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 95 | 4.4e-22 | Rx N-terminal domain |
| NB-ARC | PF00931 | 184 - 357 | 4.2e-33 | NB-ARC domain |
| WHD_DRP | PF23559 | 445 - 516 | 1.2e-17 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 570 - 862 | 6.7e-31 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 577 - 626 | 1.2e-07 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 707 - 830 | 1.7e-20 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2384 |
| Acc65I | GGTACC | 1 cut(s) | 1592 |
| AccB1I | GGYRCC | 1 cut(s) | 1592 |
| AccII | CGCG | 1 cut(s) | 2308 |
| AccIII | TCCGGA | 1 cut(s) | 1297 |
| AciI | CCGC | 4 cut(s) | 180, 1896, 2424, 2586 |
| AclWI | GGATC | 3 cut(s) | 170, 183, 207 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 8 cut(s) | 796, 948, 1362, 1704, 1792, 2056, 2320, 2516 |
| AcuI | CTGAAG | 1 cut(s) | 1178 |
| AcyI | GRCGYC | 2 cut(s) | 2047, 2381 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 543, 620, 621, 2447, 2566 |
| AflIII | ACRYGT | 3 cut(s) | 213, 763, 1902 |
| AgeI | ACCGGT | 1 cut(s) | 998 |
| AhlI | ACTAGT | 1 cut(s) | 62 |
| AjiI | CACGTC | 2 cut(s) | 214, 235 |
| AjnI | CCWGG | 1 cut(s) | 1716 |
| Alw21I | GWGCWC | 1 cut(s) | 240 |
| Alw26I | GTCTC | 6 cut(s) | 183, 251, 721, 1178, 1601, 2466 |
| AlwI | GGATC | 3 cut(s) | 170, 183, 207 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2288 |
| Ama87I | CYCGRG | 2 cut(s) | 1658, 2447 |
| Aor13HI | TCCGGA | 1 cut(s) | 1297 |
| AoxI | GGCC | 5 cut(s) | 3, 503, 596, 601, 2363 |
| ApeKI | GCWGC | 4 cut(s) | 470, 1515, 2189, 2786 |
| ApoI | RAATTY | 8 cut(s) | 796, 948, 1362, 1704, 1792, 2056, 2320, 2516 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1777, 1809 |
| AsiGI | ACCGGT | 1 cut(s) | 998 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1212, 2845 |
| Asp718I | GGTACC | 1 cut(s) | 1592 |
| AspS9I | GGNCC | 5 cut(s) | 597, 1045, 1664, 1785, 2364 |
| AsuC2I | CCSGG | 1 cut(s) | 600 |
| AsuHPI | GGTGA | 5 cut(s) | 85, 583, 967, 1013, 1847 |
| AvaI | CYCGRG | 2 cut(s) | 1658, 2447 |
| AvaII | GGWCC | 3 cut(s) | 1045, 1664, 1785 |
| AxyI | CCTNAGG | 1 cut(s) | 1781 |
| BamHI | GGATCC | 1 cut(s) | 175 |
| BanI | GGYRCC | 1 cut(s) | 1592 |
| BanII | GRGCYC | 1 cut(s) | 2081 |
| BauI | CACGAG | 1 cut(s) | 675 |
| BbsI | GAAGAC | 4 cut(s) | 596, 888, 1166, 1307 |
| Bbv12I | GWGCWC | 1 cut(s) | 240 |
| BbvI | GCAGC | 4 cut(s) | 457, 1502, 2176, 2773 |
| BccI | CCATC | 6 cut(s) | 220, 619, 1592, 1681, 2089, 2366 |
| BceAI | ACGGC | 3 cut(s) | 518, 1822, 2136 |
| BciT130I | CCWGG | 1 cut(s) | 1718 |
| BclI | TGATCA | 1 cut(s) | 1008 |
| BcnI | CCSGG | 1 cut(s) | 600 |
| BcoDI | GTCTC | 6 cut(s) | 183, 251, 721, 1178, 1601, 2466 |
| BcuI | ACTAGT | 1 cut(s) | 62 |
| BfaI | CTAG | 3 cut(s) | 63, 863, 2069 |
| BfmI | CTRYAG | 3 cut(s) | 474, 1219, 2750 |
| BglII | AGATCT | 2 cut(s) | 400, 2125 |
| BisI | GCNGC | 5 cut(s) | 471, 1516, 2190, 2425, 2787 |
| BlsI | GCNGC | 5 cut(s) | 472, 1517, 2191, 2426, 2788 |
| BmcAI | AGTACT | 1 cut(s) | 918 |
| Bme1390I | CCNGG | 2 cut(s) | 600, 1718 |
| Bme18I | GGWCC | 3 cut(s) | 1045, 1664, 1785 |
| BmeT110I | CYCGRG | 2 cut(s) | 1658, 2447 |
| BmgBI | CACGTC | 2 cut(s) | 214, 235 |
| BmgT120I | GGNCC | 5 cut(s) | 597, 1045, 1664, 1785, 2364 |
| BmiI | GGNNCC | 8 cut(s) | 177, 1296, 1594, 1665, 2078, 2356, 2428, 2842 |
| BmrFI | CCNGG | 2 cut(s) | 600, 1718 |
| BmrI | ACTGGG | 1 cut(s) | 270 |
| BmsI | GCATC | 5 cut(s) | 142, 661, 1818, 2092, 2826 |
| BmuI | ACTGGG | 1 cut(s) | 270 |
| BpiI | GAAGAC | 4 cut(s) | 596, 888, 1166, 1307 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2795, 2827 |
| BpmI | CTGGAG | 1 cut(s) | 2310 |
| BpuEI | CTTGAG | 1 cut(s) | 768 |
| BpuMI | CCSGG | 1 cut(s) | 600 |
| BsaHI | GRCGYC | 2 cut(s) | 2047, 2381 |
| BsaJI | CCNNGG | 4 cut(s) | 6, 500, 1659, 1716 |
| BsaWI | WCCGGW | 2 cut(s) | 998, 1297 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2339, 2369 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 543, 620, 621, 2447, 2566 |
| Bse118I | RCCGGY | 1 cut(s) | 998 |
| Bse1I | ACTGG | 4 cut(s) | 197, 265, 914, 1948 |
| Bse21I | CCTNAGG | 1 cut(s) | 1781 |
| BseAI | TCCGGA | 1 cut(s) | 1297 |
| BseBI | CCWGG | 1 cut(s) | 1718 |
| BseDI | CCNNGG | 4 cut(s) | 6, 500, 1659, 1716 |
| BseGI | GGATG | 8 cut(s) | 235, 609, 630, 1386, 2160, 2379, 2552, 2817 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 543, 620, 621, 2447, 2566 |
| BseMII | CTCAG | 8 cut(s) | 147, 246, 434, 732, 1107, 1268, 1767, 2120 |
| BseNI | ACTGG | 4 cut(s) | 197, 265, 914, 1948 |
| BseRI | GAGGAG | 3 cut(s) | 1900, 2419, 2433 |
| BseXI | GCAGC | 4 cut(s) | 457, 1502, 2176, 2773 |
| Bsh1236I | CGCG | 1 cut(s) | 2308 |
| BshFI | GGCC | 5 cut(s) | 5, 505, 598, 603, 2365 |
| BshNI | GGYRCC | 1 cut(s) | 1592 |
| BshTI | ACCGGT | 1 cut(s) | 998 |
| BsiHKAI | GWGCWC | 1 cut(s) | 240 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1658, 2447 |
| BsiSI | CCGG | 3 cut(s) | 600, 999, 1298 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 543, 620, 621, 2447, 2566 |
| BsmAI | GTCTC | 6 cut(s) | 183, 251, 721, 1178, 1601, 2466 |
| BsmBI | CGTCTC | 1 cut(s) | 2466 |
| BsmI | GAATGC | 3 cut(s) | 94, 2266, 2305 |
| BsnI | GGCC | 5 cut(s) | 5, 505, 598, 603, 2365 |
| BsoBI | CYCGRG | 2 cut(s) | 1658, 2447 |
| Bsp1286I | GDGCHC | 2 cut(s) | 240, 2081 |
| Bsp13I | TCCGGA | 1 cut(s) | 1297 |
| Bsp1407I | TGTACA | 2 cut(s) | 1546, 1914 |
| Bsp143I | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| Bsp68I | TCGCGA | 1 cut(s) | 2308 |
| BspACI | CCGC | 4 cut(s) | 180, 1896, 2424, 2586 |
| BspANI | GGCC | 5 cut(s) | 5, 505, 598, 603, 2365 |
| BspCNI | CTCAG | 8 cut(s) | 148, 247, 433, 731, 1108, 1269, 1766, 2121 |
| BspEI | TCCGGA | 1 cut(s) | 1297 |
| BspFNI | CGCG | 1 cut(s) | 2308 |
| BspLI | GGNNCC | 8 cut(s) | 177, 1296, 1594, 1665, 2078, 2356, 2428, 2842 |
| BspMAI | CTGCAG | 1 cut(s) | 2754 |
| BspPI | GGATC | 3 cut(s) | 170, 183, 207 |
| BspT107I | GGYRCC | 1 cut(s) | 1592 |
| BsrFI | RCCGGY | 1 cut(s) | 998 |
| BsrGI | TGTACA | 2 cut(s) | 1546, 1914 |
| BsrI | ACTGG | 4 cut(s) | 197, 265, 914, 1948 |
| BssAI | RCCGGY | 1 cut(s) | 998 |
| BssECI | CCNNGG | 4 cut(s) | 6, 500, 1659, 1716 |
| BssMI | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| BssNI | GRCGYC | 2 cut(s) | 2047, 2381 |
| BssSI | CACGAG | 1 cut(s) | 675 |
| Bst2BI | CACGAG | 1 cut(s) | 675 |
| Bst2UI | CCWGG | 1 cut(s) | 1718 |
| Bst4CI | ACNGT | 4 cut(s) | 1142, 1534, 2404, 2460 |
| Bst6I | CTCTTC | 5 cut(s) | 405, 1413, 1821, 1953, 2496 |
| BstACI | GRCGYC | 2 cut(s) | 2047, 2381 |
| BstAUI | TGTACA | 2 cut(s) | 1546, 1914 |
| BstC8I | GCNNGC | 3 cut(s) | 452, 468, 2791 |
| BstDSI | CCRYGG | 1 cut(s) | 500 |
| BstEII | GGTNACC | 2 cut(s) | 909, 955 |
| BstF5I | GGATG | 8 cut(s) | 235, 609, 630, 1386, 2160, 2379, 2552, 2817 |
| BstFNI | CGCG | 1 cut(s) | 2308 |
| BstKTI | GATC | 6 cut(s) | 178, 202, 403, 1011, 2128, 2508 |
| BstMAI | GTCTC | 6 cut(s) | 183, 251, 721, 1178, 1601, 2466 |
| BstMBI | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1641 |
| BstNI | CCWGG | 1 cut(s) | 1718 |
| BstNSI | RCATGY | 1 cut(s) | 767 |
| BstPI | GGTNACC | 2 cut(s) | 909, 955 |
| BstSCI | CCNGG | 2 cut(s) | 598, 1716 |
| BstSFI | CTRYAG | 3 cut(s) | 474, 1219, 2750 |
| BstUI | CGCG | 1 cut(s) | 2308 |
| BstV1I | GCAGC | 4 cut(s) | 457, 1502, 2176, 2773 |
| BstV2I | GAAGAC | 4 cut(s) | 596, 888, 1166, 1307 |
| BstX2I | RGATCY | 3 cut(s) | 175, 400, 2125 |
| BstYI | RGATCY | 3 cut(s) | 175, 400, 2125 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1781 |
| BsuRI | GGCC | 5 cut(s) | 5, 505, 598, 603, 2365 |
| BtgI | CCRYGG | 1 cut(s) | 500 |
| BtgZI | GCGATG | 1 cut(s) | 1477 |
| BtrI | CACGTC | 2 cut(s) | 214, 235 |
| BtsCI | GGATG | 8 cut(s) | 235, 609, 630, 1386, 2160, 2379, 2552, 2817 |
| BtsI | GCAGTG | 2 cut(s) | 1382, 2747 |
| BtsIMutI | CAGTG | 4 cut(s) | 252, 775, 1382, 2747 |
| BtuMI | TCGCGA | 1 cut(s) | 2308 |
| Cac8I | GCNNGC | 3 cut(s) | 452, 468, 2791 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2288 |
| Cfr10I | RCCGGY | 1 cut(s) | 998 |
| Cfr13I | GGNCC | 5 cut(s) | 597, 1045, 1664, 1785, 2364 |
| CseI | GACGC | 3 cut(s) | 251, 2036, 2288 |
| CspAI | ACCGGT | 1 cut(s) | 998 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 875, 910, 2818, 2853 |
| CviAII | CATG | 9 cut(s) | 463, 705, 764, 1006, 1526, 1538, 2006, 2315, 2488 |
| DpnI | GATC | 6 cut(s) | 177, 201, 402, 1010, 2127, 2507 |
| DpnII | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 5 cut(s) | 405, 1413, 1821, 1953, 2496 |
| EarI | CTCTTC | 5 cut(s) | 405, 1413, 1821, 1953, 2496 |
| EciI | GGCGGA | 1 cut(s) | 2601 |
| Eco24I | GRGCYC | 1 cut(s) | 2081 |
| Eco32I | GATATC | 2 cut(s) | 1683, 1856 |
| Eco47I | GGWCC | 3 cut(s) | 1045, 1664, 1785 |
| Eco57I | CTGAAG | 1 cut(s) | 1178 |
| Eco81I | CCTNAGG | 1 cut(s) | 1781 |
| Eco88I | CYCGRG | 2 cut(s) | 1658, 2447 |
| Eco91I | GGTNACC | 2 cut(s) | 909, 955 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1785 |
| EcoO65I | GGTNACC | 2 cut(s) | 909, 955 |
| EcoRI | GAATTC | 1 cut(s) | 948 |
| EcoRII | CCWGG | 1 cut(s) | 1716 |
| EcoRV | GATATC | 2 cut(s) | 1683, 1856 |
| EcoT22I | ATGCAT | 1 cut(s) | 1527 |
| EcoT38I | GRGCYC | 1 cut(s) | 2081 |
| Esp3I | CGTCTC | 1 cut(s) | 2466 |
| FaeI | CATG | 9 cut(s) | 466, 708, 767, 1009, 1529, 1541, 2009, 2318, 2491 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 434, 466, 741, 773, 1350, 1382, 2217, 2249 |
| FatI | CATG | 9 cut(s) | 462, 704, 763, 1005, 1525, 1537, 2005, 2314, 2487 |
| FauI | CCCGC | 2 cut(s) | 187, 1903 |
| FbaI | TGATCA | 1 cut(s) | 1008 |
| Fnu4HI | GCNGC | 5 cut(s) | 471, 1516, 2190, 2425, 2787 |
| FokI | GGATG | 8 cut(s) | 242, 596, 637, 1393, 2147, 2386, 2539, 2804 |
| FriOI | GRGCYC | 1 cut(s) | 2081 |
| Fsp4HI | GCNGC | 5 cut(s) | 471, 1516, 2190, 2425, 2787 |
| FspBI | CTAG | 3 cut(s) | 63, 863, 2069 |
| GluI | GCNGC | 5 cut(s) | 471, 1516, 2190, 2425, 2787 |
| GsuI | CTGGAG | 1 cut(s) | 2310 |
| HaeIII | GGCC | 5 cut(s) | 5, 505, 598, 603, 2365 |
| HapII | CCGG | 3 cut(s) | 600, 999, 1298 |
| HgaI | GACGC | 3 cut(s) | 251, 2036, 2288 |
| Hin1I | GRCGYC | 2 cut(s) | 2047, 2381 |
| Hin1II | CATG | 9 cut(s) | 466, 708, 767, 1009, 1529, 1541, 2009, 2318, 2491 |
| HincII | GTYRAC | 4 cut(s) | 19, 106, 417, 433 |
| HindII | GTYRAC | 4 cut(s) | 19, 106, 417, 433 |
| HpaI | GTTAAC | 2 cut(s) | 106, 417 |
| HpaII | CCGG | 3 cut(s) | 600, 999, 1298 |
| HphI | GGTGA | 5 cut(s) | 85, 583, 967, 1013, 1847 |
| Hpy166II | GTNNAC | 5 cut(s) | 19, 106, 417, 433, 876 |
| Hpy8I | GTNNAC | 5 cut(s) | 19, 106, 417, 433, 876 |
| Hpy99I | CGWCG | 5 cut(s) | 245, 527, 827, 2282, 2386 |
| HpyAV | CCTTC | 6 cut(s) | 62, 91, 1228, 2012, 2566, 2804 |
| HpyCH4III | ACNGT | 4 cut(s) | 1142, 1534, 2404, 2460 |
| HpyCH4IV | ACGT | 9 cut(s) | 102, 213, 234, 316, 429, 822, 1902, 2381, 2826 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1641 |
| HpySE526I | ACGT | 9 cut(s) | 102, 213, 234, 316, 429, 822, 1902, 2381, 2826 |
| Hsp92I | GRCGYC | 2 cut(s) | 2047, 2381 |
| Hsp92II | CATG | 9 cut(s) | 466, 708, 767, 1009, 1529, 1541, 2009, 2318, 2491 |
| Kpn2I | TCCGGA | 1 cut(s) | 1297 |
| KpnI | GGTACC | 1 cut(s) | 1596 |
| Ksp22I | TGATCA | 1 cut(s) | 1008 |
| KspAI | GTTAAC | 2 cut(s) | 106, 417 |
| Kzo9I | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| LmnI | GCTCC | 5 cut(s) | 1300, 2076, 2360, 2432, 2510 |
| Lsp1109I | GCAGC | 4 cut(s) | 457, 1502, 2176, 2773 |
| LweI | GCATC | 5 cut(s) | 142, 661, 1818, 2092, 2826 |
| MaeI | CTAG | 3 cut(s) | 63, 863, 2069 |
| MaeII | ACGT | 9 cut(s) | 102, 213, 234, 316, 429, 822, 1902, 2381, 2826 |
| MaeIII | GTNAC | 9 cut(s) | 364, 374, 909, 955, 1001, 1136, 1383, 1799, 1907 |
| MalI | GATC | 6 cut(s) | 177, 201, 402, 1010, 2127, 2507 |
| MboI | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| MfeI | CAATTG | 5 cut(s) | 35, 334, 353, 1817, 2368 |
| MflI | RGATCY | 3 cut(s) | 175, 400, 2125 |
| MhlI | GDGCHC | 2 cut(s) | 240, 2081 |
| MlyI | GAGTC | 5 cut(s) | 1745, 1807, 2227, 2262, 2321 |
| MmeI | TCCRAC | 4 cut(s) | 153, 177, 783, 1116 |
| Mph1103I | ATGCAT | 1 cut(s) | 1527 |
| MroI | TCCGGA | 1 cut(s) | 1297 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1212, 2845 |
| MslI | CAYNNNNRTG | 3 cut(s) | 768, 2004, 2415 |
| MspA1I | CMGCKG | 1 cut(s) | 182 |
| MspI | CCGG | 3 cut(s) | 600, 999, 1298 |
| MspR9I | CCNGG | 2 cut(s) | 600, 1718 |
| MunI | CAATTG | 5 cut(s) | 35, 334, 353, 1817, 2368 |
| Mva1269I | GAATGC | 3 cut(s) | 94, 2266, 2305 |
| MvaI | CCWGG | 1 cut(s) | 1718 |
| MvnI | CGCG | 1 cut(s) | 2308 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1641 |
| NciI | CCSGG | 1 cut(s) | 600 |
| NdeII | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| NlaIII | CATG | 9 cut(s) | 466, 708, 767, 1009, 1529, 1541, 2009, 2318, 2491 |
| NlaIV | GGNNCC | 8 cut(s) | 177, 1296, 1594, 1665, 2078, 2356, 2428, 2842 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 5 cut(s) | 955, 1001, 1136, 1383, 1799 |
| NruI | TCGCGA | 1 cut(s) | 2308 |
| NsiI | ATGCAT | 1 cut(s) | 1527 |
| NspI | RCATGY | 1 cut(s) | 767 |
| PciI | ACATGT | 1 cut(s) | 763 |
| PctI | GAATGC | 3 cut(s) | 94, 2266, 2305 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1212, 2845 |
| PfeI | GAWTC | 6 cut(s) | 850, 1037, 1630, 2140, 2633, 2755 |
| PinAI | ACCGGT | 1 cut(s) | 998 |
| PkrI | GCNGC | 5 cut(s) | 472, 1517, 2191, 2426, 2788 |
| PleI | GAGTC | 5 cut(s) | 1745, 1806, 2226, 2262, 2321 |
| PpsI | GAGTC | 5 cut(s) | 1745, 1806, 2226, 2262, 2321 |
| PpuMI | RGGWCCY | 1 cut(s) | 1785 |
| PscI | ACATGT | 1 cut(s) | 763 |
| Psp5II | RGGWCCY | 1 cut(s) | 1785 |
| Psp6I | CCWGG | 1 cut(s) | 1716 |
| PspEI | GGTNACC | 2 cut(s) | 909, 955 |
| PspGI | CCWGG | 1 cut(s) | 1716 |
| PspN4I | GGNNCC | 8 cut(s) | 177, 1296, 1594, 1665, 2078, 2356, 2428, 2842 |
| PspPI | GGNCC | 5 cut(s) | 597, 1045, 1664, 1785, 2364 |
| PspPPI | RGGWCCY | 1 cut(s) | 1785 |
| PstI | CTGCAG | 1 cut(s) | 2754 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2288 |
| PsuI | RGATCY | 3 cut(s) | 175, 400, 2125 |
| RruI | TCGCGA | 1 cut(s) | 2308 |
| RseI | CAYNNNNRTG | 3 cut(s) | 768, 2004, 2415 |
| SatI | GCNGC | 5 cut(s) | 471, 1516, 2190, 2425, 2787 |
| Sau3AI | GATC | 6 cut(s) | 175, 199, 400, 1008, 2125, 2505 |
| Sau96I | GGNCC | 5 cut(s) | 597, 1045, 1664, 1785, 2364 |
| ScaI | AGTACT | 1 cut(s) | 918 |
| SchI | GAGTC | 5 cut(s) | 1745, 1807, 2227, 2262, 2321 |
| ScrFI | CCNGG | 2 cut(s) | 600, 1718 |
| SduI | GDGCHC | 2 cut(s) | 240, 2081 |
| SfaNI | GCATC | 5 cut(s) | 142, 661, 1818, 2092, 2826 |
| SfcI | CTRYAG | 3 cut(s) | 474, 1219, 2750 |
| SinI | GGWCC | 3 cut(s) | 1045, 1664, 1785 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 768, 2004, 2415 |
| SmlI | CTYRAG | 1 cut(s) | 783 |
| SmoI | CTYRAG | 1 cut(s) | 783 |
| SpeI | ACTAGT | 1 cut(s) | 62 |
| SsiI | CCGC | 4 cut(s) | 180, 1896, 2424, 2586 |
| SspI | AATATT | 1 cut(s) | 1402 |
| SspMI | CTAG | 3 cut(s) | 63, 863, 2069 |
| StyD4I | CCNGG | 2 cut(s) | 598, 1716 |
| TaaI | ACNGT | 4 cut(s) | 1142, 1534, 2404, 2460 |
| TaiI | ACGT | 9 cut(s) | 105, 216, 237, 319, 432, 825, 1905, 2384, 2829 |
| TatI | WGTACW | 4 cut(s) | 916, 1546, 1914, 2227 |
| TauI | GCSGC | 1 cut(s) | 2427 |
| TfiI | GAWTC | 6 cut(s) | 850, 1037, 1630, 2140, 2633, 2755 |
| TscAI | CASTG | 4 cut(s) | 259, 775, 1382, 2754 |
| TseFI | GTSAC | 5 cut(s) | 955, 1001, 1136, 1383, 1799 |
| TseI | GCWGC | 4 cut(s) | 470, 1515, 2189, 2786 |
| Tsp45I | GTSAC | 5 cut(s) | 955, 1001, 1136, 1383, 1799 |
| TspGWI | ACGGA | 3 cut(s) | 893, 2153, 2538 |
| TspRI | CASTG | 4 cut(s) | 259, 775, 1382, 2754 |
| VpaK11BI | GGWCC | 3 cut(s) | 1045, 1664, 1785 |
| XapI | RAATTY | 8 cut(s) | 796, 948, 1362, 1704, 1792, 2056, 2320, 2516 |
| XbaI | TCTAGA | 1 cut(s) | 862 |
| XceI | RCATGY | 1 cut(s) | 767 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2494 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1212, 2845 |
| XspI | CTAG | 3 cut(s) | 63, 863, 2069 |
| ZraI | GACGTC | 1 cut(s) | 2382 |
| ZrmI | AGTACT | 1 cut(s) | 918 |
| Zsp2I | ATGCAT | 1 cut(s) | 1527 |