disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 96 | 3.6e-21 | Rx N-terminal domain |
| NB-ARC | PF00931 | 184 - 357 | 6e-36 | NB-ARC domain |
| WHD_DRP | PF23559 | 445 - 515 | 5.9e-16 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 560 - 645 | 4.7e-11 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 567 - 624 | 5.3e-07 | Leucine rich repeat |
| LRR_14 | PF23598 | 568 - 848 | 2.9e-30 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 707 - 837 | 6.4e-24 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 378 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1645 |
| Acc65I | GGTACC | 1 cut(s) | 1589 |
| AccB1I | GGYRCC | 2 cut(s) | 1589, 2076 |
| AccII | CGCG | 4 cut(s) | 150, 352, 2289, 2832 |
| AccIII | TCCGGA | 1 cut(s) | 1297 |
| AciI | CCGC | 3 cut(s) | 182, 2287, 2326 |
| AclWI | GGATC | 2 cut(s) | 2520, 2867 |
| AcoI | YGGCCR | 1 cut(s) | 2327 |
| AcuI | CTGAAG | 1 cut(s) | 1178 |
| AcyI | GRCGYC | 1 cut(s) | 2077 |
| AfaI | GTAC | 7 cut(s) | 221, 315, 1545, 1591, 1708, 1910, 2027 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 543, 620, 621, 1098, 2293, 2468, 2581 |
| AflIII | ACRYGT | 1 cut(s) | 213 |
| AjiI | CACGTC | 2 cut(s) | 214, 235 |
| AjnI | CCWGG | 2 cut(s) | 969, 2378 |
| Alw21I | GWGCWC | 1 cut(s) | 207 |
| Alw26I | GTCTC | 4 cut(s) | 183, 721, 1178, 1598 |
| AlwI | GGATC | 2 cut(s) | 2520, 2867 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2916 |
| Aor13HI | TCCGGA | 1 cut(s) | 1297 |
| AoxI | GGCC | 5 cut(s) | 601, 2199, 2327, 2381, 2400 |
| ApeKI | GCWGC | 5 cut(s) | 470, 473, 1512, 2189, 2805 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1049, 1212, 1260, 2777 |
| Asp718I | GGTACC | 1 cut(s) | 1589 |
| AspLEI | GCGC | 2 cut(s) | 352, 2079 |
| AspS9I | GGNCC | 3 cut(s) | 1295, 1658, 2382 |
| AsuC2I | CCSGG | 1 cut(s) | 600 |
| AsuHPI | GGTGA | 6 cut(s) | 85, 196, 583, 967, 1699, 1841 |
| AvaII | GGWCC | 2 cut(s) | 1295, 1658 |
| BanI | GGYRCC | 2 cut(s) | 1589, 2076 |
| BanII | GRGCYC | 1 cut(s) | 207 |
| BauI | CACGAG | 1 cut(s) | 675 |
| BbsI | GAAGAC | 1 cut(s) | 1166 |
| Bbv12I | GWGCWC | 1 cut(s) | 207 |
| BbvCI | CCTCAGC | 1 cut(s) | 6 |
| BbvI | GCAGC | 5 cut(s) | 457, 460, 1499, 2176, 2817 |
| BccI | CCATC | 4 cut(s) | 220, 619, 1649, 2439 |
| BceAI | ACGGC | 4 cut(s) | 2136, 2241, 2415, 2464 |
| BciT130I | CCWGG | 2 cut(s) | 971, 2380 |
| BciVI | GTATCC | 1 cut(s) | 143 |
| BclI | TGATCA | 1 cut(s) | 1008 |
| BcnI | CCSGG | 1 cut(s) | 600 |
| BcoDI | GTCTC | 4 cut(s) | 183, 721, 1178, 1598 |
| BfaI | CTAG | 2 cut(s) | 863, 2069 |
| BfmI | CTRYAG | 2 cut(s) | 474, 2768 |
| BfoI | RGCGCY | 1 cut(s) | 2080 |
| BfuI | GTATCC | 1 cut(s) | 143 |
| BglII | AGATCT | 2 cut(s) | 400, 2125 |
| BisI | GCNGC | 7 cut(s) | 471, 474, 1513, 2190, 2287, 2327, 2806 |
| BlpI | GCTNAGC | 1 cut(s) | 2147 |
| BlsI | GCNGC | 7 cut(s) | 472, 475, 1514, 2191, 2288, 2328, 2807 |
| Bme1390I | CCNGG | 3 cut(s) | 600, 971, 2380 |
| Bme18I | GGWCC | 2 cut(s) | 1295, 1658 |
| BmgBI | CACGTC | 2 cut(s) | 214, 235 |
| BmgT120I | GGNCC | 3 cut(s) | 1295, 1658, 2382 |
| BmiI | GGNNCC | 5 cut(s) | 1296, 1591, 2078, 2374, 2857 |
| BmrFI | CCNGG | 3 cut(s) | 600, 971, 2380 |
| BmrI | ACTGGG | 1 cut(s) | 649 |
| BmsI | GCATC | 5 cut(s) | 142, 661, 831, 2092, 2575 |
| BmuI | ACTGGG | 1 cut(s) | 649 |
| BoxI | GACNNNNGTC | 1 cut(s) | 80 |
| BpiI | GAAGAC | 1 cut(s) | 1166 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2810, 2842 |
| BpmI | CTGGAG | 1 cut(s) | 2328 |
| Bpu10I | CCTNAGC | 2 cut(s) | 6, 1584 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2147 |
| BpuMI | CCSGG | 1 cut(s) | 600 |
| BsaHI | GRCGYC | 1 cut(s) | 2077 |
| BsaJI | CCNNGG | 4 cut(s) | 970, 1497, 1594, 2508 |
| BsaWI | WCCGGW | 1 cut(s) | 1297 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 543, 620, 621, 1098, 2293, 2468, 2581 |
| Bse1I | ACTGG | 5 cut(s) | 84, 197, 333, 655, 999 |
| BseAI | TCCGGA | 1 cut(s) | 1297 |
| BseBI | CCWGG | 2 cut(s) | 971, 2380 |
| BseDI | CCNNGG | 4 cut(s) | 970, 1497, 1594, 2508 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 543, 620, 621, 1098, 2293, 2468, 2581 |
| BseMII | CTCAG | 8 cut(s) | 147, 267, 434, 732, 1016, 1107, 2120, 2279 |
| BseNI | ACTGG | 5 cut(s) | 84, 197, 333, 655, 999 |
| BseRI | GAGGAG | 3 cut(s) | 1835, 1894, 2454 |
| BseXI | GCAGC | 5 cut(s) | 457, 460, 1499, 2176, 2817 |
| Bsh1236I | CGCG | 4 cut(s) | 150, 352, 2289, 2832 |
| BshFI | GGCC | 5 cut(s) | 603, 2201, 2329, 2383, 2402 |
| BshNI | GGYRCC | 2 cut(s) | 1589, 2076 |
| BsiHKAI | GWGCWC | 1 cut(s) | 207 |
| BsiSI | CCGG | 3 cut(s) | 600, 1298, 2741 |
| BslFI | GGGAC | 3 cut(s) | 607, 2467, 2819 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 543, 620, 621, 1098, 2293, 2468, 2581 |
| BsmAI | GTCTC | 4 cut(s) | 183, 721, 1178, 1598 |
| BsmFI | GGGAC | 3 cut(s) | 607, 2467, 2819 |
| BsmI | GAATGC | 2 cut(s) | 94, 2323 |
| BsnI | GGCC | 5 cut(s) | 603, 2201, 2329, 2383, 2402 |
| Bsp1286I | GDGCHC | 1 cut(s) | 207 |
| Bsp13I | TCCGGA | 1 cut(s) | 1297 |
| Bsp1407I | TGTACA | 2 cut(s) | 1543, 1908 |
| Bsp143I | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2147 |
| Bsp19I | CCATGG | 2 cut(s) | 1594, 2508 |
| Bsp68I | TCGCGA | 1 cut(s) | 150 |
| BspACI | CCGC | 3 cut(s) | 182, 2287, 2326 |
| BspANI | GGCC | 5 cut(s) | 603, 2201, 2329, 2383, 2402 |
| BspCNI | CTCAG | 8 cut(s) | 148, 268, 433, 731, 1017, 1108, 2121, 2278 |
| BspEI | TCCGGA | 1 cut(s) | 1297 |
| BspFNI | CGCG | 4 cut(s) | 150, 352, 2289, 2832 |
| BspLI | GGNNCC | 5 cut(s) | 1296, 1591, 2078, 2374, 2857 |
| BspMAI | CTGCAG | 2 cut(s) | 478, 2772 |
| BspPI | GGATC | 2 cut(s) | 2520, 2867 |
| BspT107I | GGYRCC | 2 cut(s) | 1589, 2076 |
| BsrGI | TGTACA | 2 cut(s) | 1543, 1908 |
| BsrI | ACTGG | 5 cut(s) | 84, 197, 333, 655, 999 |
| BssECI | CCNNGG | 4 cut(s) | 970, 1497, 1594, 2508 |
| BssMI | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| BssNI | GRCGYC | 1 cut(s) | 2077 |
| BssSI | CACGAG | 1 cut(s) | 675 |
| BssT1I | CCWWGG | 3 cut(s) | 1497, 1594, 2508 |
| Bst2BI | CACGAG | 1 cut(s) | 675 |
| Bst2UI | CCWGG | 2 cut(s) | 971, 2380 |
| Bst4CI | ACNGT | 4 cut(s) | 1142, 1531, 1764, 2425 |
| Bst6I | CTCTTC | 3 cut(s) | 405, 1947, 2640 |
| BstACI | GRCGYC | 1 cut(s) | 2077 |
| BstAUI | TGTACA | 2 cut(s) | 1543, 1908 |
| BstC8I | GCNNGC | 1 cut(s) | 468 |
| BstDSI | CCRYGG | 2 cut(s) | 1594, 2508 |
| BstEII | GGTNACC | 1 cut(s) | 955 |
| BstFNI | CGCG | 4 cut(s) | 150, 352, 2289, 2832 |
| BstH2I | RGCGCY | 1 cut(s) | 2080 |
| BstHHI | GCGC | 2 cut(s) | 352, 2079 |
| BstKTI | GATC | 6 cut(s) | 403, 1011, 2084, 2128, 2515, 2875 |
| BstMAI | GTCTC | 4 cut(s) | 183, 721, 1178, 1598 |
| BstMBI | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 2198, 2207, 2805 |
| BstNI | CCWGG | 2 cut(s) | 971, 2380 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 80 |
| BstPI | GGTNACC | 1 cut(s) | 955 |
| BstSCI | CCNGG | 3 cut(s) | 598, 969, 2378 |
| BstSFI | CTRYAG | 2 cut(s) | 474, 2768 |
| BstUI | CGCG | 4 cut(s) | 150, 352, 2289, 2832 |
| BstV1I | GCAGC | 5 cut(s) | 457, 460, 1499, 2176, 2817 |
| BstV2I | GAAGAC | 1 cut(s) | 1166 |
| BstX2I | RGATCY | 2 cut(s) | 400, 2125 |
| BstYI | RGATCY | 2 cut(s) | 400, 2125 |
| BsuI | GTATCC | 1 cut(s) | 143 |
| BsuRI | GGCC | 5 cut(s) | 603, 2201, 2329, 2383, 2402 |
| BtgI | CCRYGG | 2 cut(s) | 1594, 2508 |
| BtgZI | GCGATG | 1 cut(s) | 165 |
| BtrI | CACGTC | 2 cut(s) | 214, 235 |
| BtsI | GCAGTG | 2 cut(s) | 1382, 2765 |
| BtsIMutI | CAGTG | 5 cut(s) | 77, 252, 775, 1382, 2765 |
| BtuMI | TCGCGA | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 1 cut(s) | 468 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2916 |
| CfoI | GCGC | 2 cut(s) | 352, 2079 |
| Cfr13I | GGNCC | 3 cut(s) | 1295, 1658, 2382 |
| CseI | GACGC | 3 cut(s) | 126, 251, 2821 |
| Csp6I | GTAC | 7 cut(s) | 220, 314, 1544, 1590, 1707, 1909, 2026 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 875, 910 |
| CviAII | CATG | 8 cut(s) | 463, 705, 1006, 1523, 1535, 1595, 2333, 2509 |
| CviQI | GTAC | 7 cut(s) | 220, 314, 1544, 1590, 1707, 1909, 2026 |
| DinI | GGCGCC | 1 cut(s) | 2078 |
| DpnI | GATC | 6 cut(s) | 402, 1010, 2083, 2127, 2514, 2874 |
| DpnII | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| DraI | TTTAAA | 2 cut(s) | 2004, 2244 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1645 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1645 |
| EaeI | YGGCCR | 1 cut(s) | 2327 |
| Eam1104I | CTCTTC | 3 cut(s) | 405, 1947, 2640 |
| EarI | CTCTTC | 3 cut(s) | 405, 1947, 2640 |
| Ecl136II | GAGCTC | 1 cut(s) | 205 |
| Eco130I | CCWWGG | 3 cut(s) | 1497, 1594, 2508 |
| Eco24I | GRGCYC | 1 cut(s) | 207 |
| Eco32I | GATATC | 1 cut(s) | 697 |
| Eco47I | GGWCC | 2 cut(s) | 1295, 1658 |
| Eco53kI | GAGCTC | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 1 cut(s) | 1178 |
| Eco91I | GGTNACC | 1 cut(s) | 955 |
| EcoICRI | GAGCTC | 1 cut(s) | 205 |
| EcoO65I | GGTNACC | 1 cut(s) | 955 |
| EcoRII | CCWGG | 2 cut(s) | 969, 2378 |
| EcoRV | GATATC | 1 cut(s) | 697 |
| EcoT14I | CCWWGG | 3 cut(s) | 1497, 1594, 2508 |
| EcoT22I | ATGCAT | 1 cut(s) | 1524 |
| EcoT38I | GRGCYC | 1 cut(s) | 207 |
| EgeI | GGCGCC | 1 cut(s) | 2078 |
| EheI | GGCGCC | 1 cut(s) | 2078 |
| ErhI | CCWWGG | 3 cut(s) | 1497, 1594, 2508 |
| FaeI | CATG | 8 cut(s) | 466, 708, 1009, 1526, 1538, 1598, 2336, 2512 |
| FaqI | GGGAC | 3 cut(s) | 607, 2467, 2819 |
| FatI | CATG | 8 cut(s) | 462, 704, 1005, 1522, 1534, 1594, 2332, 2508 |
| FauNDI | CATATG | 1 cut(s) | 2863 |
| FbaI | TGATCA | 1 cut(s) | 1008 |
| Fnu4HI | GCNGC | 7 cut(s) | 471, 474, 1513, 2190, 2287, 2327, 2806 |
| FriOI | GRGCYC | 1 cut(s) | 207 |
| Fsp4HI | GCNGC | 7 cut(s) | 471, 474, 1513, 2190, 2287, 2327, 2806 |
| FspBI | CTAG | 2 cut(s) | 863, 2069 |
| GlaI | GCGC | 2 cut(s) | 351, 2078 |
| GluI | GCNGC | 7 cut(s) | 471, 474, 1513, 2190, 2287, 2327, 2806 |
| GsuI | CTGGAG | 1 cut(s) | 2328 |
| HaeII | RGCGCY | 1 cut(s) | 2080 |
| HaeIII | GGCC | 5 cut(s) | 603, 2201, 2329, 2383, 2402 |
| HapII | CCGG | 3 cut(s) | 600, 1298, 2741 |
| HgaI | GACGC | 3 cut(s) | 126, 251, 2821 |
| HhaI | GCGC | 2 cut(s) | 352, 2079 |
| Hin1I | GRCGYC | 1 cut(s) | 2077 |
| Hin1II | CATG | 8 cut(s) | 466, 708, 1009, 1526, 1538, 1598, 2336, 2512 |
| Hin6I | GCGC | 2 cut(s) | 350, 2077 |
| HinP1I | GCGC | 2 cut(s) | 350, 2077 |
| HincII | GTYRAC | 3 cut(s) | 106, 417, 433 |
| HindII | GTYRAC | 3 cut(s) | 106, 417, 433 |
| HpaI | GTTAAC | 1 cut(s) | 417 |
| HpaII | CCGG | 3 cut(s) | 600, 1298, 2741 |
| HphI | GGTGA | 6 cut(s) | 85, 196, 583, 967, 1699, 1841 |
| Hpy166II | GTNNAC | 6 cut(s) | 52, 106, 417, 433, 876, 2726 |
| Hpy8I | GTNNAC | 6 cut(s) | 52, 106, 417, 433, 876, 2726 |
| Hpy99I | CGWCG | 3 cut(s) | 375, 527, 2401 |
| HpyAV | CCTTC | 9 cut(s) | 62, 91, 583, 824, 932, 1228, 2006, 2581, 2819 |
| HpyCH4III | ACNGT | 4 cut(s) | 1142, 1531, 1764, 2425 |
| HpyCH4IV | ACGT | 6 cut(s) | 102, 130, 213, 234, 316, 429 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 2198, 2207, 2805 |
| HpySE526I | ACGT | 6 cut(s) | 102, 130, 213, 234, 316, 429 |
| Hsp92I | GRCGYC | 1 cut(s) | 2077 |
| Hsp92II | CATG | 8 cut(s) | 466, 708, 1009, 1526, 1538, 1598, 2336, 2512 |
| HspAI | GCGC | 2 cut(s) | 350, 2077 |
| KasI | GGCGCC | 1 cut(s) | 2076 |
| Kpn2I | TCCGGA | 1 cut(s) | 1297 |
| KpnI | GGTACC | 1 cut(s) | 1593 |
| Ksp22I | TGATCA | 1 cut(s) | 1008 |
| KspAI | GTTAAC | 1 cut(s) | 417 |
| Kzo9I | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| LmnI | GCTCC | 3 cut(s) | 2378, 2531, 2546 |
| Lsp1109I | GCAGC | 5 cut(s) | 457, 460, 1499, 2176, 2817 |
| LweI | GCATC | 5 cut(s) | 142, 661, 831, 2092, 2575 |
| MaeI | CTAG | 2 cut(s) | 863, 2069 |
| MaeII | ACGT | 6 cut(s) | 102, 130, 213, 234, 316, 429 |
| MaeIII | GTNAC | 9 cut(s) | 73, 364, 955, 1001, 1136, 1383, 1647, 1901, 2438 |
| MalI | GATC | 6 cut(s) | 402, 1010, 2083, 2127, 2514, 2874 |
| MboI | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| MflI | RGATCY | 2 cut(s) | 400, 2125 |
| MhlI | GDGCHC | 1 cut(s) | 207 |
| Mly113I | GGCGCC | 1 cut(s) | 2077 |
| MlyI | GAGTC | 2 cut(s) | 1036, 2339 |
| MmeI | TCCRAC | 3 cut(s) | 153, 177, 1116 |
| Mph1103I | ATGCAT | 1 cut(s) | 1524 |
| MroI | TCCGGA | 1 cut(s) | 1297 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1049, 1212, 1260, 2777 |
| MspI | CCGG | 3 cut(s) | 600, 1298, 2741 |
| MspR9I | CCNGG | 3 cut(s) | 600, 971, 2380 |
| Mva1269I | GAATGC | 2 cut(s) | 94, 2323 |
| MvaI | CCWGG | 2 cut(s) | 971, 2380 |
| MvnI | CGCG | 4 cut(s) | 150, 352, 2289, 2832 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 2198, 2207, 2805 |
| NarI | GGCGCC | 1 cut(s) | 2077 |
| NciI | CCSGG | 1 cut(s) | 600 |
| NcoI | CCATGG | 2 cut(s) | 1594, 2508 |
| NdeI | CATATG | 1 cut(s) | 2863 |
| NdeII | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| NlaIII | CATG | 8 cut(s) | 466, 708, 1009, 1526, 1538, 1598, 2336, 2512 |
| NlaIV | GGNNCC | 5 cut(s) | 1296, 1591, 2078, 2374, 2857 |
| NmeAIII | GCCGAG | 1 cut(s) | 2227 |
| NmuCI | GTSAC | 6 cut(s) | 73, 955, 1001, 1136, 1383, 1647 |
| NruI | TCGCGA | 1 cut(s) | 150 |
| NsiI | ATGCAT | 1 cut(s) | 1524 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2402 |
| PctI | GAATGC | 2 cut(s) | 94, 2323 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1049, 1212, 1260, 2777 |
| PkrI | GCNGC | 7 cut(s) | 472, 475, 1514, 2191, 2288, 2328, 2807 |
| PleI | GAGTC | 2 cut(s) | 1035, 2339 |
| PluTI | GGCGCC | 1 cut(s) | 2080 |
| PpsI | GAGTC | 2 cut(s) | 1035, 2339 |
| PshAI | GACNNNNGTC | 1 cut(s) | 80 |
| PsiI | TTATAA | 1 cut(s) | 378 |
| Psp124BI | GAGCTC | 1 cut(s) | 207 |
| Psp6I | CCWGG | 2 cut(s) | 969, 2378 |
| PspEI | GGTNACC | 1 cut(s) | 955 |
| PspGI | CCWGG | 2 cut(s) | 969, 2378 |
| PspN4I | GGNNCC | 5 cut(s) | 1296, 1591, 2078, 2374, 2857 |
| PspPI | GGNCC | 3 cut(s) | 1295, 1658, 2382 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1230, 1262 |
| PstI | CTGCAG | 2 cut(s) | 478, 2772 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2916 |
| PsuI | RGATCY | 2 cut(s) | 400, 2125 |
| RruI | TCGCGA | 1 cut(s) | 150 |
| RsaI | GTAC | 7 cut(s) | 221, 315, 1545, 1591, 1708, 1910, 2027 |
| RsaNI | GTAC | 7 cut(s) | 220, 314, 1544, 1590, 1707, 1909, 2026 |
| SacI | GAGCTC | 1 cut(s) | 207 |
| SatI | GCNGC | 7 cut(s) | 471, 474, 1513, 2190, 2287, 2327, 2806 |
| Sau3AI | GATC | 6 cut(s) | 400, 1008, 2081, 2125, 2512, 2872 |
| Sau96I | GGNCC | 3 cut(s) | 1295, 1658, 2382 |
| SchI | GAGTC | 2 cut(s) | 1036, 2339 |
| ScrFI | CCNGG | 3 cut(s) | 600, 971, 2380 |
| SduI | GDGCHC | 1 cut(s) | 207 |
| SfaNI | GCATC | 5 cut(s) | 142, 661, 831, 2092, 2575 |
| SfcI | CTRYAG | 2 cut(s) | 474, 2768 |
| SfoI | GGCGCC | 1 cut(s) | 2078 |
| SinI | GGWCC | 2 cut(s) | 1295, 1658 |
| SsiI | CCGC | 3 cut(s) | 182, 2287, 2326 |
| SspDI | GGCGCC | 1 cut(s) | 2076 |
| SspI | AATATT | 2 cut(s) | 810, 1402 |
| SspMI | CTAG | 2 cut(s) | 863, 2069 |
| SstI | GAGCTC | 1 cut(s) | 207 |
| StyD4I | CCNGG | 3 cut(s) | 598, 969, 2378 |
| StyI | CCWWGG | 3 cut(s) | 1497, 1594, 2508 |
| TaaI | ACNGT | 4 cut(s) | 1142, 1531, 1764, 2425 |
| TaiI | ACGT | 6 cut(s) | 105, 133, 216, 237, 319, 432 |
| TatI | WGTACW | 2 cut(s) | 1543, 1908 |
| TauI | GCSGC | 2 cut(s) | 2289, 2329 |
| TscAI | CASTG | 5 cut(s) | 84, 259, 775, 1382, 2772 |
| TseFI | GTSAC | 6 cut(s) | 73, 955, 1001, 1136, 1383, 1647 |
| TseI | GCWGC | 5 cut(s) | 470, 473, 1512, 2189, 2805 |
| Tsp45I | GTSAC | 6 cut(s) | 73, 955, 1001, 1136, 1383, 1647 |
| TspGWI | ACGGA | 2 cut(s) | 905, 2623 |
| TspRI | CASTG | 5 cut(s) | 84, 259, 775, 1382, 2772 |
| VpaK11BI | GGWCC | 2 cut(s) | 1295, 1658 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 622 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1049, 1212, 1260, 2777 |
| XspI | CTAG | 2 cut(s) | 863, 2069 |
| Zsp2I | ATGCAT | 1 cut(s) | 1524 |