Rw0G022140

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01027
Physical Location & Seq
Forward (+)
30777 .. 32978
2202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G022140.1

Sequence Viewer

Length: 2157 bp
ATGGCTGAGGCACTCATCTCTGTGCTTCTGGAGCAATTGGCTTCAGTAGTATATCAACACACAAATGAAGCGGTGAAACTGGTTTTGAATGCTGACAAAGATGTTAAAAGTTTCAGCAGCAAGCTCAAAGCCATCCAGGCTGTGCTTGAGGATGCCGAGAAGAAACAAGTGACAGAGGCCAGCGTGGGCGACTGGTTGCAGAAGCTCAAAGATGTGTCGTACGAGATGGACGACGTGCTAGATGAGTGGAACACTGAACTTCTCAGACAACAAGCGGAGGAGAAGCAAGAGGTGGAAGGAGATAATGCTCTTGTTACCAAGAAGAAGGTACGTTTCCCCACGTCCTCCGGTTGCTTTTGTTTTGGTCAAGTCAATAAGGTCATTCATCATCATAACATAGCTAGAAGGATAAAGGAACTGAATGAGAAGTTAACTTTGATTGCTGCTGAAAGAGAAATGTATGGCTTTCATCAATCCACAATAGGTGGCCATCATGAGCAGTTTATTCAACGACAGACTTCATCTTTGGTCGATGTATCTACGATATTTGGCCGAGAAGAAGAAGAAGAGTATTTGTTGAGCAAGTTGTTGAGAGAGAGTAATCAAGATGGGGGGAGGTTCCTTGTCATCCCTATTGTAGGGATGGGAGGGATGGGGAAAACTACTCTTGCCCAACTGGCCTATAACAATGAAAAGATTACAGCCCATTTCAACAAGAAAGTATGGGTTTGTGTCTCAGACCCTTTTGATGAGGTTAAGATTGCGAAAGCGATCATTGAAAATCTAGATGGAACCCAAAGCAGTTCAAATGAGTTGGAAATTTTATTGCAATCTATCAAGAGACATGTTGAGGATGAGAAGTTTCTTCTTGTACTAGATGATGTGTGGACGGAAGACCCTAAAAAGTGGGAAAATTTGAAACTACCAATTATAATGCAAAGTTGTGCTAAGGGCAGTACAATACTGGTGACCACGCGAAAAGAAGGGGTTGCTAAAATGATGAGAGCAACCAAAAGCACGATCCATTTGGACAAGTTGAGCGATAGGGATTATGAGGCTAACGGGTTTGGAGCTATTGGTGAGGAAATTGTGAAAAAGTGTAAAGGTTTGCCTCTTGCTGCAAAGACTTTAGGCAGTCTAGTGTGGTATAAGAAAACAAGAGAGGAATGGCGGGATGTTCTGAATAGTAAGATATGGGAACTAGAAGAAGTTGAGGAACAAGTTTTCCGACCACTATTACTAAGTTATTATGATTTGGCCCCTGCAATTAAAAGATGCCTTTTGTATTGTGCTATATTTCCCAAAGATTATGAGTTAAGAAAAGAAAATTTGATTGAGCTTTGGATGTCACAAGGTTATCTTAATTCAAAGGGAAACAAAGATAAGAGAAGAATAGGTCAATATTATTTTGAGAGTCTAGTAATGCGGTCTTTCTTTCAAGATTTTAGAAAAGATAAGAGGGGACTTGTTAGGTGCAAAATGCATGATATTGTGCATGACTTTGTGCAGTTTCTTACTAAAAAAGAGTGCATTTTTATAGAAGCAGTTGAGGGTGCTAATCAAAGAATGGAGCTACCGGGTGATAAAGTTCGTCATTTGACCCTAACAAGTGTACCCGAAGGTACACTTTCATTTCCTACTTCATTTGACAACTGCAAAAATGTACGAACCCTCACACTCCTTGATTCAAGCATTACAACCATAAGCCCGGGTTCAATTATGCAAATGAAATGCCTCAGGACATTGAATTTACGTCGTAACAAGCTCAATGAAGTTCCAAAAGAGATTGGTGAATTGATTCATTTGAGATATATGGATCTGTCTTATAATCGTGATTTCAAAGAATTACCGGATGCTGTGTGTGATTTATACACTCTACAAACTCTGGTCCTGGAGTTCTGTAATAAACTAGAGAAACTACCCAAGGCAATGGGAAAGTTGATTAACTTGAAGCATCTATATGTTGGGGGTTGTTCTAAGCTGAGGTACTTACCAAAAGGGATTGGGAGTTTGAAAAGTCTGCAAGTGCTGGACTGCTTTTATGTATGTGAGGGTGATGATGAAGCATTGAAATTAGGAGATCTCGGAATCATGGACCAGCTCCAGGGGCGCCTTTGGATACAAGGATTGGGGAAAGATGATGCAGAGAGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

718

Amino Acids

82.18

Weight (kDa)

6.49

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 2.1e-21 Rx N-terminal domain
NB-ARC PF00931 188 - 348 5.5e-32 NB-ARC domain
WHD_DRP PF23559 432 - 502 1.7e-24 Disease resistance protein Winged helix domain
LRR_8 PF13855 546 - 589 1e-07 Leucine rich repeat
LRR_14 PF23598 555 - 702 8.4e-23 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 932, 1827
AccB1I GGYRCC 1 cut(s) 2109
AccII CGCG 1 cut(s) 976
AciI CCGC 4 cut(s) 71, 275, 1171, 1426
AclWI GGATC 2 cut(s) 1015, 1824
AcoI YGGCCR 2 cut(s) 487, 550
AcsI RAATTY 4 cut(s) 819, 913, 1327, 1747
AcuI CTGAAG 1 cut(s) 27
AcyI GRCGYC 1 cut(s) 2110
AfaI GTAC 8 cut(s) 221, 330, 873, 958, 1614, 1624, 1665, 1988
AfiI CCNNNNNNNGG 2 cut(s) 638, 2104
AflIII ACRYGT 1 cut(s) 844
AjiI CACGTC 2 cut(s) 235, 342
AjnI CCWGG 3 cut(s) 135, 1890, 2103
AloI GAACNNNNNNTCC 2 cut(s) 1209, 1241
AluBI AGCT 9 cut(s) 124, 205, 401, 1073, 1339, 1573, 1765, 1981, 2101
AluI AGCT 9 cut(s) 124, 205, 401, 1073, 1339, 1573, 1765, 1981, 2101
Alw26I GTCTC 2 cut(s) 739, 835
AlwI GGATC 2 cut(s) 1015, 1824
Ama87I CYCGRG 1 cut(s) 1708
AoxI GGCC 5 cut(s) 177, 487, 550, 678, 1257
ApeKI GCWGC 3 cut(s) 117, 443, 1118
ApoI RAATTY 4 cut(s) 819, 913, 1327, 1747
ArsI GACNNNNNNTTYG 2 cut(s) 508, 540
Asp700I GAANNNNTTC 1 cut(s) 1797
AspLEI GCGC 1 cut(s) 2112
AspS9I GGNCC 3 cut(s) 1258, 1888, 2095
AsuC2I CCSGG 3 cut(s) 1578, 1709, 1710
AsuHPI GGTGA 6 cut(s) 85, 979, 1091, 1592, 1802, 2066
AvaI CYCGRG 1 cut(s) 1708
AvaII GGWCC 2 cut(s) 1888, 2095
AxyI CCTNAGG 1 cut(s) 1736
BaeI ACNNNNGTAYC 2 cut(s) 1596, 1629
BalI TGGCCA 1 cut(s) 489
BanI GGYRCC 1 cut(s) 2109
BbsI GAAGAC 1 cut(s) 900
BbvCI CCTCAGC 2 cut(s) 6, 1982
BbvI GCAGC 3 cut(s) 129, 430, 1105
BccI CCATC 7 cut(s) 140, 220, 498, 602, 637, 646, 782
BciT130I CCWGG 3 cut(s) 137, 1892, 2105
BciVI GTATCC 1 cut(s) 2112
BcnI CCSGG 3 cut(s) 1578, 1709, 1710
BcoDI GTCTC 2 cut(s) 739, 835
BfaI CTAG 8 cut(s) 239, 402, 785, 875, 1139, 1202, 1418, 1910
BfoI RGCGCY 1 cut(s) 2113
BfuI GTATCC 1 cut(s) 2112
BglI GCCNNNNNGGC 2 cut(s) 137, 677
BglII AGATCT 1 cut(s) 2080
BisI GCNGC 3 cut(s) 118, 444, 1119
BlsI GCNGC 3 cut(s) 119, 445, 1120
Bme1390I CCNGG 6 cut(s) 137, 1578, 1709, 1710, 1892, 2105
Bme18I GGWCC 2 cut(s) 1888, 2095
BmeT110I CYCGRG 1 cut(s) 1708
BmgBI CACGTC 2 cut(s) 235, 342
BmgT120I GGNCC 3 cut(s) 1258, 1888, 2095
BmiI GGNNCC 4 cut(s) 620, 793, 1260, 2111
BmrFI CCNGG 6 cut(s) 137, 1578, 1709, 1710, 1892, 2105
BmsI GCATC 5 cut(s) 142, 1265, 1843, 1963, 2131
BpiI GAAGAC 1 cut(s) 900
BpmI CTGGAG 3 cut(s) 50, 1913, 2087
Bpu10I CCTNAGC 3 cut(s) 6, 948, 1982
BpuEI CTTGAG 1 cut(s) 167
BpuMI CCSGG 3 cut(s) 1578, 1709, 1710
BsaHI GRCGYC 1 cut(s) 2110
BsaJI CCNNGG 3 cut(s) 1708, 1923, 2104
BsaWI WCCGGW 2 cut(s) 347, 1849
Bsc4I CCNNNNNNNGG 2 cut(s) 638, 2104
Bse1I ACTGG 4 cut(s) 84, 197, 681, 969
Bse21I CCTNAGG 1 cut(s) 1736
Bse3DI GCAATG 1 cut(s) 1935
BseBI CCWGG 3 cut(s) 137, 1892, 2105
BseDI CCNNGG 3 cut(s) 1708, 1923, 2104
BseGI GGATG 9 cut(s) 132, 157, 627, 648, 657, 859, 1180, 1350, 1858
BseLI CCNNNNNNNGG 2 cut(s) 638, 2104
BseMI GCAATG 1 cut(s) 1935
BseMII CTCAG 4 cut(s) 277, 750, 1750, 1973
BseNI ACTGG 4 cut(s) 84, 197, 681, 969
BseRI GAGGAG 1 cut(s) 293
BseXI GCAGC 3 cut(s) 129, 430, 1105
BsgI GTGCAG 1 cut(s) 1526
Bsh1236I CGCG 1 cut(s) 976
BshFI GGCC 5 cut(s) 179, 489, 552, 680, 1259
BshNI GGYRCC 1 cut(s) 2109
BsiHKCI CYCGRG 1 cut(s) 1708
BsiSI CCGG 4 cut(s) 348, 1577, 1709, 1850
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 1 cut(s) 1476
BslI CCNNNNNNNGG 2 cut(s) 638, 2104
BsmAI GTCTC 2 cut(s) 739, 835
BsmFI GGGAC 1 cut(s) 1476
BsmI GAATGC 1 cut(s) 94
BsnI GGCC 5 cut(s) 179, 489, 552, 680, 1259
BsoBI CYCGRG 1 cut(s) 1708
Bsp143I GATC 4 cut(s) 771, 1020, 1816, 2080
BspACI CCGC 4 cut(s) 71, 275, 1171, 1426
BspANI GGCC 5 cut(s) 179, 489, 552, 680, 1259
BspCNI CTCAG 4 cut(s) 276, 749, 1749, 1974
BspFNI CGCG 1 cut(s) 976
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 4 cut(s) 620, 793, 1260, 2111
BspPI GGATC 2 cut(s) 1015, 1824
BspT107I GGYRCC 1 cut(s) 2109
BsrDI GCAATG 1 cut(s) 1935
BsrI ACTGG 4 cut(s) 84, 197, 681, 969
BssECI CCNNGG 3 cut(s) 1708, 1923, 2104
BssMI GATC 4 cut(s) 771, 1020, 1816, 2080
BssNI GRCGYC 1 cut(s) 2110
BssT1I CCWWGG 1 cut(s) 1923
Bst2UI CCWGG 3 cut(s) 137, 1892, 2105
Bst6I CTCTTC 1 cut(s) 561
BstACI GRCGYC 1 cut(s) 2110
BstC8I GCNNGC 2 cut(s) 122, 181
BstDEI CTNAG 8 cut(s) 6, 263, 736, 948, 1241, 1736, 1977, 1982
BstEII GGTNACC 1 cut(s) 967
BstENI CCTNNNNNAGG 1 cut(s) 636
BstF5I GGATG 9 cut(s) 132, 157, 627, 648, 657, 859, 1180, 1350, 1858
BstFNI CGCG 1 cut(s) 976
BstH2I RGCGCY 1 cut(s) 2113
BstHHI GCGC 1 cut(s) 2112
BstKTI GATC 4 cut(s) 774, 1023, 1819, 2083
BstMAI GTCTC 2 cut(s) 739, 835
BstMBI GATC 4 cut(s) 771, 1020, 1816, 2080
BstMWI GCNNNNNNNGC 4 cut(s) 31, 137, 677, 2107
BstNI CCWGG 3 cut(s) 137, 1892, 2105
BstNSI RCATGY 1 cut(s) 848
BstPI GGTNACC 1 cut(s) 967
BstSCI CCNGG 6 cut(s) 135, 1576, 1707, 1708, 1890, 2103
BstUI CGCG 1 cut(s) 976
BstV1I GCAGC 3 cut(s) 129, 430, 1105
BstV2I GAAGAC 1 cut(s) 900
BstX2I RGATCY 2 cut(s) 1816, 2080
BstXI CCANNNNNNTGG 1 cut(s) 1930
BstYI RGATCY 2 cut(s) 1816, 2080
Bsu36I CCTNAGG 1 cut(s) 1736
BsuI GTATCC 1 cut(s) 2112
BsuRI GGCC 5 cut(s) 179, 489, 552, 680, 1259
BtrI CACGTC 2 cut(s) 235, 342
BtsCI GGATG 9 cut(s) 132, 157, 627, 648, 657, 859, 1180, 1350, 1858
BtsIMutI CAGTG 1 cut(s) 252
Cac8I GCNNGC 2 cut(s) 122, 181
CciI TCATGA 1 cut(s) 493
CfoI GCGC 1 cut(s) 2112
Cfr13I GGNCC 3 cut(s) 1258, 1888, 2095
Cfr9I CCCGGG 1 cut(s) 1708
Csp6I GTAC 8 cut(s) 220, 329, 872, 957, 1613, 1623, 1664, 1987
CviAII CATG 5 cut(s) 494, 845, 1484, 1496, 2092
CviQI GTAC 8 cut(s) 220, 329, 872, 957, 1613, 1623, 1664, 1987
DdeI CTNAG 8 cut(s) 6, 263, 736, 948, 1241, 1736, 1977, 1982
DinI GGCGCC 1 cut(s) 2111
DpnI GATC 4 cut(s) 773, 1022, 1818, 2082
DpnII GATC 4 cut(s) 771, 1020, 1816, 2080
EaeI YGGCCR 2 cut(s) 487, 550
Eam1104I CTCTTC 1 cut(s) 561
EarI CTCTTC 1 cut(s) 561
Eco130I CCWWGG 1 cut(s) 1923
Eco47I GGWCC 2 cut(s) 1888, 2095
Eco57I CTGAAG 1 cut(s) 27
Eco81I CCTNAGG 1 cut(s) 1736
Eco88I CYCGRG 1 cut(s) 1708
Eco91I GGTNACC 1 cut(s) 967
EcoNI CCTNNNNNAGG 1 cut(s) 636
EcoO65I GGTNACC 1 cut(s) 967
EcoRII CCWGG 3 cut(s) 135, 1890, 2103
EcoT14I CCWWGG 1 cut(s) 1923
EcoT22I ATGCAT 1 cut(s) 1485
EgeI GGCGCC 1 cut(s) 2111
EheI GGCGCC 1 cut(s) 2111
ErhI CCWWGG 1 cut(s) 1923
FaeI CATG 5 cut(s) 497, 848, 1487, 1499, 2095
FalI AAGNNNNNCTT 4 cut(s) 1344, 1376, 1611, 1643
FaqI GGGAC 1 cut(s) 1476
FatI CATG 5 cut(s) 493, 844, 1483, 1495, 2091
FauI CCCGC 1 cut(s) 1164
Fnu4HI GCNGC 3 cut(s) 118, 444, 1119
FokI GGATG 9 cut(s) 119, 164, 614, 655, 664, 866, 1187, 1357, 1865
Fsp4HI GCNGC 3 cut(s) 118, 444, 1119
FspBI CTAG 8 cut(s) 239, 402, 785, 875, 1139, 1202, 1418, 1910
GlaI GCGC 1 cut(s) 2111
GluI GCNGC 3 cut(s) 118, 444, 1119
GsuI CTGGAG 3 cut(s) 50, 1913, 2087
HaeII RGCGCY 1 cut(s) 2113
HaeIII GGCC 5 cut(s) 179, 489, 552, 680, 1259
HapII CCGG 4 cut(s) 348, 1577, 1709, 1850
HhaI GCGC 1 cut(s) 2112
Hin1I GRCGYC 1 cut(s) 2110
Hin1II CATG 5 cut(s) 497, 848, 1487, 1499, 2095
Hin6I GCGC 1 cut(s) 2110
HinP1I GCGC 1 cut(s) 2110
HincII GTYRAC 1 cut(s) 432
HindII GTYRAC 1 cut(s) 432
HinfI GANTC 4 cut(s) 1414, 1685, 1798, 2088
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 4 cut(s) 348, 1577, 1709, 1850
HphI GGTGA 6 cut(s) 85, 979, 1091, 1592, 1802, 2066
Hpy166II GTNNAC 4 cut(s) 432, 888, 1613, 1625
Hpy188I TCNGA 5 cut(s) 266, 739, 1182, 1229, 2087
Hpy188III TCNNGA 8 cut(s) 29, 494, 605, 785, 838, 1439, 1738, 1832
Hpy8I GTNNAC 4 cut(s) 432, 888, 1613, 1625
Hpy99I CGWCG 2 cut(s) 236, 1758
HpyAV CCTTC 5 cut(s) 290, 319, 399, 977, 1613
HpyCH4IV ACGT 4 cut(s) 234, 331, 341, 1753
HpyF10VI GCNNNNNNNGC 4 cut(s) 31, 137, 677, 2107
HpyF3I CTNAG 8 cut(s) 6, 263, 736, 948, 1241, 1736, 1977, 1982
HpySE526I ACGT 4 cut(s) 234, 331, 341, 1753
Hsp92I GRCGYC 1 cut(s) 2110
Hsp92II CATG 5 cut(s) 497, 848, 1487, 1499, 2095
HspAI GCGC 1 cut(s) 2110
KasI GGCGCC 1 cut(s) 2109
KspAI GTTAAC 1 cut(s) 432
Kzo9I GATC 4 cut(s) 771, 1020, 1816, 2080
LmnI GCTCC 4 cut(s) 31, 1070, 1570, 2106
Lsp1109I GCAGC 3 cut(s) 129, 430, 1105
LweI GCATC 5 cut(s) 142, 1265, 1843, 1963, 2131
MaeI CTAG 8 cut(s) 239, 402, 785, 875, 1139, 1202, 1418, 1910
MaeII ACGT 4 cut(s) 234, 331, 341, 1753
MaeIII GTNAC 5 cut(s) 169, 313, 967, 1347, 1757
MalI GATC 4 cut(s) 773, 1022, 1818, 2082
MboI GATC 4 cut(s) 771, 1020, 1816, 2080
MfeI CAATTG 1 cut(s) 35
MflI RGATCY 2 cut(s) 1816, 2080
MlsI TGGCCA 1 cut(s) 489
MluNI TGGCCA 1 cut(s) 489
Mly113I GGCGCC 1 cut(s) 2110
MlyI GAGTC 1 cut(s) 1423
MmeI TCCRAC 2 cut(s) 795, 1252
Mox20I TGGCCA 1 cut(s) 489
Mph1103I ATGCAT 1 cut(s) 1485
MroXI GAANNNNTTC 1 cut(s) 1797
MscI TGGCCA 1 cut(s) 489
MseI TTAA 7 cut(s) 105, 431, 756, 1269, 1316, 1362, 1944
MslI CAYNNNNRTG 3 cut(s) 20, 63, 1959
Msp20I TGGCCA 1 cut(s) 489
MspI CCGG 4 cut(s) 348, 1577, 1709, 1850
MspR9I CCNGG 6 cut(s) 137, 1578, 1709, 1710, 1892, 2105
MunI CAATTG 1 cut(s) 35
Mva1269I GAATGC 1 cut(s) 94
MvaI CCWGG 3 cut(s) 137, 1892, 2105
MvnI CGCG 1 cut(s) 976
MwoI GCNNNNNNNGC 4 cut(s) 31, 137, 677, 2107
NarI GGCGCC 1 cut(s) 2110
NciI CCSGG 3 cut(s) 1578, 1709, 1710
NdeII GATC 4 cut(s) 771, 1020, 1816, 2080
NlaIII CATG 5 cut(s) 497, 848, 1487, 1499, 2095
NlaIV GGNNCC 4 cut(s) 620, 793, 1260, 2111
NmeAIII GCCGAG 2 cut(s) 181, 578
NmuCI GTSAC 3 cut(s) 169, 967, 1347
NsiI ATGCAT 1 cut(s) 1485
NspI RCATGY 1 cut(s) 848
PagI TCATGA 1 cut(s) 493
PciI ACATGT 1 cut(s) 844
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 1797
PfeI GAWTC 3 cut(s) 1685, 1798, 2088
Pfl23II CGTACG 1 cut(s) 219
PfoI TCCNGGA 1 cut(s) 1890
PkrI GCNGC 3 cut(s) 119, 445, 1120
PleI GAGTC 1 cut(s) 1422
PluTI GGCGCC 1 cut(s) 2113
PpsI GAGTC 1 cut(s) 1422
PscI ACATGT 1 cut(s) 844
PsiI TTATAA 2 cut(s) 932, 1827
Psp6I CCWGG 3 cut(s) 135, 1890, 2103
PspEI GGTNACC 1 cut(s) 967
PspGI CCWGG 3 cut(s) 135, 1890, 2103
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 4 cut(s) 620, 793, 1260, 2111
PspPI GGNCC 3 cut(s) 1258, 1888, 2095
PsuI RGATCY 2 cut(s) 1816, 2080
RsaI GTAC 8 cut(s) 221, 330, 873, 958, 1614, 1624, 1665, 1988
RsaNI GTAC 8 cut(s) 220, 329, 872, 957, 1613, 1623, 1664, 1987
RseI CAYNNNNRTG 3 cut(s) 20, 63, 1959
SaqAI TTAA 7 cut(s) 105, 431, 756, 1269, 1316, 1362, 1944
SatI GCNGC 3 cut(s) 118, 444, 1119
Sau3AI GATC 4 cut(s) 771, 1020, 1816, 2080
Sau96I GGNCC 3 cut(s) 1258, 1888, 2095
SchI GAGTC 1 cut(s) 1423
ScrFI CCNGG 6 cut(s) 137, 1578, 1709, 1710, 1892, 2105
SfaNI GCATC 5 cut(s) 142, 1265, 1843, 1963, 2131
SfoI GGCGCC 1 cut(s) 2111
SinI GGWCC 2 cut(s) 1888, 2095
SmaI CCCGGG 1 cut(s) 1710
SmiMI CAYNNNNRTG 3 cut(s) 20, 63, 1959
SmlI CTYRAG 1 cut(s) 146
SmoI CTYRAG 1 cut(s) 146
SsiI CCGC 4 cut(s) 71, 275, 1171, 1426
SspDI GGCGCC 1 cut(s) 2109
SspI AATATT 1 cut(s) 1403
SspMI CTAG 8 cut(s) 239, 402, 785, 875, 1139, 1202, 1418, 1910
StyD4I CCNGG 6 cut(s) 135, 1576, 1707, 1708, 1890, 2103
StyI CCWWGG 1 cut(s) 1923
TaiI ACGT 4 cut(s) 237, 334, 344, 1756
TaqI TCGA 1 cut(s) 531
TatI WGTACW 2 cut(s) 871, 956
TfiI GAWTC 3 cut(s) 1685, 1798, 2088
Tru1I TTAA 7 cut(s) 105, 431, 756, 1269, 1316, 1362, 1944
Tru9I TTAA 7 cut(s) 105, 431, 756, 1269, 1316, 1362, 1944
TscAI CASTG 1 cut(s) 259
TseFI GTSAC 3 cut(s) 169, 967, 1347
TseI GCWGC 3 cut(s) 117, 443, 1118
Tsp45I GTSAC 3 cut(s) 169, 967, 1347
TspGWI ACGGA 1 cut(s) 905
TspMI CCCGGG 1 cut(s) 1708
TspRI CASTG 1 cut(s) 259
VpaK11BI GGWCC 2 cut(s) 1888, 2095
XagI CCTNNNNNAGG 1 cut(s) 636
XapI RAATTY 4 cut(s) 819, 913, 1327, 1747
XbaI TCTAGA 1 cut(s) 784
XceI RCATGY 1 cut(s) 848
XmaI CCCGGG 1 cut(s) 1708
XmnI GAANNNNTTC 1 cut(s) 1797
XspI CTAG 8 cut(s) 239, 402, 785, 875, 1139, 1202, 1418, 1910
Zsp2I ATGCAT 1 cut(s) 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.