Rmu_sc0005400.1_g000012

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005400.1
Physical Location & Seq
Reverse (-)
94775 .. 96214
1440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005400.1_g000012.1.cds

Sequence Viewer

Length: 1440 bp
atgcatgatattgtgcatgactttgtgcagttcctcacaaaaaatgaatgttttatgatggaggctaaagatgataatgatgagatagagtcagtccctgctaacaacattgcagagcaagtgaatgacaagcttcatcattttactttaatgtttgcaccttatggtccctttccatcttctgtttcatttgaccattgcaaaaatttgcgcagtctcgcaacttttgagtccaaaatcactgtcatagactcaaatttagtttcacaattgaaatgtcttcggacattaaatttgagtcaaaatgacttaaaagaagttccaaaggaaattggtgaattaatacatttgaggtatcttgacttgactaaaaatcattctttagaggaactacctaacacactgggtaacttatgcaacttgcagaccttgcgccttctttcgtgtcataaacttagaaaactacctgagaccatgggaaagctggtaagcttgaagcatctttatatttggggttgtagtcttctgatgcacttgccaaaagggattgggagattaacaagtatgcaaacactagatgagtgtcctctttatggtagtgactctgaggaagcttgcacatttggagatctgggaaggttgaaccagcttcagggtagatttaagataaaagttttgggggattggatggatgacagtgaggctgagaaggcacatcttggtaagaaaaaacaacttttccatgtggaactagattttgcaaacttggaaagcaagagaagaaaaagcaatgtagaaattgtagatgtcttacaactaccacaacatttggagtctttaaccatcgcttggtatgagggtgtctgtacctggcccacttcgttgatgtcattaaacagtttgagaatcctttctctttttcgttggactgtctgtgaaattttgcctccacttgggaagttgaattcccttgaagaactggaagtatacgatacgaaagtcaaaaaggttggagttgaatttttgggaatagaatctcaaacatcttcctcatcatgtattttattcccaaaattgaagaaacttaaacttgaacaaatgccagagtgggaagaatgggaaggagtggaagggtggaaagaggattctaacatttcgataatgccatgcctttcttccttacaaattgatagctgccatcaacttaaaacactaccagacttcttgcggaagacatcactactgcagaatcttaccatcagtggatgtaggacacttgctgaaaattgtcaagaaggcagcggaaaggagtggcccaagatctctcacgtctcaaacattgatattgaagcccagtcatggtttgagaaattttatgctatgtattatggtggtcatgatgatggtgacaatgttgataataaggatgaggatcaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

479

Amino Acids

54.74

Weight (kDa)

5.35

Isoelectric Point (pI)

56.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 212
AccB7I CCANNNNNTGG 1 cut(s) 849
AccI GTMKAC 1 cut(s) 987
AciI CCGC 2 cut(s) 1228, 1302
AcsI RAATTY 7 cut(s) 205, 256, 292, 939, 964, 1019, 1370
AcuI CTGAAG 1 cut(s) 635
AfaI GTAC 1 cut(s) 868
AfiI CCNNNNNNNGG 5 cut(s) 593, 652, 849, 953, 1359
AgsI TTSAA 9 cut(s) 274, 496, 643, 964, 974, 1019, 1078, 1094, 1349
AjiI CACGTC 1 cut(s) 1330
AjnI CCWGG 1 cut(s) 869
AluBI AGCT 6 cut(s) 133, 484, 492, 614, 649, 1194
AluI AGCT 6 cut(s) 133, 484, 492, 614, 649, 1194
Alw26I GTCTC 3 cut(s) 221, 464, 1336
AlwNI CAGNNNCTG 1 cut(s) 98
AoxI GGCC 2 cut(s) 872, 1313
ApeKI GCWGC 2 cut(s) 1194, 1299
ApoI RAATTY 7 cut(s) 205, 256, 292, 939, 964, 1019, 1370
ArsI GACNNNNNNTTYG 4 cut(s) 228, 260, 277, 309
AseI ATTAAT 1 cut(s) 341
Asp700I GAANNNNTTC 1 cut(s) 910
AspLEI GCGC 2 cut(s) 213, 435
AspS9I GGNCC 3 cut(s) 167, 873, 1314
AsuHPI GGTGA 2 cut(s) 347, 1418
AvaII GGWCC 1 cut(s) 167
BaeI ACNNNNGTAYC 2 cut(s) 984, 1017
BbsI GAAGAC 3 cut(s) 272, 515, 1238
BbvI GCAGC 2 cut(s) 1181, 1311
BccI CCATC 7 cut(s) 52, 184, 682, 851, 1206, 1265, 1397
BciT130I CCWGG 1 cut(s) 871
BcoDI GTCTC 3 cut(s) 221, 464, 1336
BfaI CTAG 2 cut(s) 575, 752
BfmI CTRYAG 1 cut(s) 1244
BglII AGATCT 2 cut(s) 628, 1320
BisI GCNGC 2 cut(s) 1195, 1300
BlsI GCNGC 2 cut(s) 1196, 1301
Bme1390I CCNGG 1 cut(s) 871
Bme18I GGWCC 1 cut(s) 167
BmgBI CACGTC 1 cut(s) 1330
BmgT120I GGNCC 3 cut(s) 167, 873, 1314
BmiI GGNNCC 1 cut(s) 169
BmrFI CCNGG 1 cut(s) 871
BmrI ACTGGG 2 cut(s) 413, 1348
BmsI GCATC 2 cut(s) 508, 519
BmuI ACTGGG 2 cut(s) 413, 1348
BpiI GAAGAC 3 cut(s) 272, 515, 1238
BsaBI GATNNNNATC 1 cut(s) 1431
BsaI GGTCTC 1 cut(s) 464
BsaJI CCNNGG 1 cut(s) 474
Bsc4I CCNNNNNNNGG 5 cut(s) 593, 652, 849, 953, 1359
Bse1I ACTGG 3 cut(s) 408, 984, 1354
Bse3DI GCAATG 3 cut(s) 108, 196, 796
Bse8I GATNNNNATC 1 cut(s) 1431
BseBI CCWGG 1 cut(s) 871
BseDI CCNNGG 1 cut(s) 474
BseGI GGATG 4 cut(s) 693, 697, 1271, 1432
BseJI GATNNNNATC 1 cut(s) 1431
BseLI CCNNNNNNNGG 5 cut(s) 593, 652, 849, 953, 1359
BseMI GCAATG 3 cut(s) 108, 196, 796
BseMII CTCAG 3 cut(s) 459, 597, 696
BseNI ACTGG 3 cut(s) 408, 984, 1354
BseXI GCAGC 2 cut(s) 1181, 1311
BsgI GTGCAG 1 cut(s) 47
BshFI GGCC 2 cut(s) 874, 1315
BslFI GGGAC 2 cut(s) 80, 153
BslI CCNNNNNNNGG 5 cut(s) 593, 652, 849, 953, 1359
BsmAI GTCTC 3 cut(s) 221, 464, 1336
BsmBI CGTCTC 1 cut(s) 1336
BsmFI GGGAC 2 cut(s) 80, 153
BsnI GGCC 2 cut(s) 874, 1315
Bso31I GGTCTC 1 cut(s) 464
Bsp143I GATC 3 cut(s) 628, 1320, 1432
Bsp19I CCATGG 1 cut(s) 474
BspACI CCGC 2 cut(s) 1228, 1302
BspANI GGCC 2 cut(s) 874, 1315
BspCNI CTCAG 3 cut(s) 460, 598, 697
BspHI TCATGA 1 cut(s) 1396
BspLI GGNNCC 1 cut(s) 169
BspMAI CTGCAG 1 cut(s) 1248
BspTNI GGTCTC 1 cut(s) 464
BsrDI GCAATG 3 cut(s) 108, 196, 796
BsrI ACTGG 3 cut(s) 408, 984, 1354
BssECI CCNNGG 1 cut(s) 474
BssMI GATC 3 cut(s) 628, 1320, 1432
BssNAI GTATAC 1 cut(s) 988
BssT1I CCWWGG 1 cut(s) 474
Bst1107I GTATAC 1 cut(s) 988
Bst2UI CCWGG 1 cut(s) 871
Bst4CI ACNGT 4 cut(s) 244, 698, 899, 931
BstAPI GCANNNNNTGC 1 cut(s) 430
BstC8I GCNNGC 1 cut(s) 616
BstDEI CTNAG 4 cut(s) 455, 468, 606, 705
BstDSI CCRYGG 1 cut(s) 474
BstF5I GGATG 4 cut(s) 693, 697, 1271, 1432
BstHHI GCGC 2 cut(s) 213, 435
BstKTI GATC 3 cut(s) 631, 1323, 1435
BstMAI GTCTC 3 cut(s) 221, 464, 1336
BstMBI GATC 3 cut(s) 628, 1320, 1432
BstMWI GCNNNNNNNGC 2 cut(s) 430, 710
BstNI CCWGG 1 cut(s) 871
BstSCI CCNGG 1 cut(s) 869
BstSFI CTRYAG 1 cut(s) 1244
BstV1I GCAGC 2 cut(s) 1181, 1311
BstV2I GAAGAC 3 cut(s) 272, 515, 1238
BstX2I RGATCY 2 cut(s) 628, 1320
BstYI RGATCY 2 cut(s) 628, 1320
BstZ17I GTATAC 1 cut(s) 988
BsuRI GGCC 2 cut(s) 874, 1315
BtgI CCRYGG 1 cut(s) 474
BtgZI GCGATG 1 cut(s) 829
BtrI CACGTC 1 cut(s) 1330
BtsCI GGATG 4 cut(s) 693, 697, 1271, 1432
BtsIMutI CAGTG 4 cut(s) 240, 401, 703, 1267
Cac8I GCNNGC 1 cut(s) 616
CaiI CAGNNNCTG 1 cut(s) 98
CciI TCATGA 1 cut(s) 1396
CfoI GCGC 2 cut(s) 213, 435
Cfr13I GGNCC 3 cut(s) 167, 873, 1314
Csp6I GTAC 1 cut(s) 867
CspCI CAANNNNNGTGG 2 cut(s) 810, 845
CviAII CATG 8 cut(s) 5, 17, 475, 743, 1056, 1167, 1359, 1397
CviQI GTAC 1 cut(s) 867
DdeI CTNAG 4 cut(s) 455, 468, 606, 705
DpnI GATC 3 cut(s) 630, 1322, 1434
DpnII GATC 3 cut(s) 628, 1320, 1432
Eco130I CCWWGG 1 cut(s) 474
Eco31I GGTCTC 1 cut(s) 464
Eco47I GGWCC 1 cut(s) 167
Eco57I CTGAAG 1 cut(s) 635
EcoRI GAATTC 1 cut(s) 964
EcoRII CCWGG 1 cut(s) 869
EcoT14I CCWWGG 1 cut(s) 474
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 474
Esp3I CGTCTC 1 cut(s) 1336
FaeI CATG 8 cut(s) 8, 20, 478, 746, 1059, 1170, 1362, 1400
FaqI GGGAC 2 cut(s) 80, 153
FatI CATG 8 cut(s) 4, 16, 474, 742, 1055, 1166, 1358, 1396
FblI GTMKAC 1 cut(s) 987
Fnu4HI GCNGC 2 cut(s) 1195, 1300
FokI GGATG 3 cut(s) 700, 704, 1278
Fsp4HI GCNGC 2 cut(s) 1195, 1300
FspBI CTAG 2 cut(s) 575, 752
FspI TGCGCA 1 cut(s) 212
GlaI GCGC 2 cut(s) 212, 434
GluI GCNGC 2 cut(s) 1195, 1300
HaeIII GGCC 2 cut(s) 874, 1315
HhaI GCGC 2 cut(s) 213, 435
Hin1II CATG 8 cut(s) 8, 20, 478, 746, 1059, 1170, 1362, 1400
Hin6I GCGC 2 cut(s) 211, 433
HinP1I GCGC 2 cut(s) 211, 433
HindIII AAGCTT 3 cut(s) 131, 490, 612
HphI GGTGA 2 cut(s) 347, 1418
Hpy166II GTNNAC 1 cut(s) 988
Hpy188I TCNGA 3 cut(s) 285, 528, 607
Hpy188III TCNNGA 3 cut(s) 359, 1292, 1397
Hpy8I GTNNAC 1 cut(s) 988
HpyAV CCTTC 6 cut(s) 446, 630, 703, 1115, 1124, 1289
HpyCH4III ACNGT 4 cut(s) 244, 698, 899, 931
HpyCH4IV ACGT 1 cut(s) 1329
HpyF10VI GCNNNNNNNGC 2 cut(s) 430, 710
HpyF3I CTNAG 4 cut(s) 455, 468, 606, 705
HpySE526I ACGT 1 cut(s) 1329
Hsp92II CATG 8 cut(s) 8, 20, 478, 746, 1059, 1170, 1362, 1400
HspAI GCGC 2 cut(s) 211, 433
Kzo9I GATC 3 cut(s) 628, 1320, 1432
Lsp1109I GCAGC 2 cut(s) 1181, 1311
LweI GCATC 2 cut(s) 508, 519
MaeI CTAG 2 cut(s) 575, 752
MaeII ACGT 1 cut(s) 1329
MaeIII GTNAC 3 cut(s) 407, 599, 1406
MalI GATC 3 cut(s) 630, 1322, 1434
MboI GATC 3 cut(s) 628, 1320, 1432
MfeI CAATTG 1 cut(s) 269
MflI RGATCY 2 cut(s) 628, 1320
MlyI GAGTC 6 cut(s) 98, 239, 245, 307, 596, 842
MmeI TCCRAC 2 cut(s) 905, 991
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 910
MslI CAYNNNNRTG 1 cut(s) 1401
MspA1I CMGCKG 1 cut(s) 1302
MspR9I CCNGG 1 cut(s) 871
MunI CAATTG 1 cut(s) 269
MvaI CCWGG 1 cut(s) 871
MwoI GCNNNNNNNGC 2 cut(s) 430, 710
NcoI CCATGG 1 cut(s) 474
NdeII GATC 3 cut(s) 628, 1320, 1432
NlaIII CATG 8 cut(s) 8, 20, 478, 746, 1059, 1170, 1362, 1400
NlaIV GGNNCC 1 cut(s) 169
NmuCI GTSAC 2 cut(s) 599, 1406
NsbI TGCGCA 1 cut(s) 212
NsiI ATGCAT 1 cut(s) 6
PagI TCATGA 1 cut(s) 1396
PdmI GAANNNNTTC 1 cut(s) 910
PfeI GAWTC 4 cut(s) 906, 1034, 1145, 1249
PflMI CCANNNNNTGG 1 cut(s) 849
PkrI GCNGC 2 cut(s) 1196, 1301
PleI GAGTC 6 cut(s) 97, 238, 245, 306, 596, 841
PpsI GAGTC 6 cut(s) 97, 238, 245, 306, 596, 841
PshBI ATTAAT 1 cut(s) 341
Psp6I CCWGG 1 cut(s) 869
PspGI CCWGG 1 cut(s) 869
PspN4I GGNNCC 1 cut(s) 169
PspPI GGNCC 3 cut(s) 167, 873, 1314
PstI CTGCAG 1 cut(s) 1248
PstNI CAGNNNCTG 1 cut(s) 98
PsuI RGATCY 2 cut(s) 628, 1320
RsaI GTAC 1 cut(s) 868
RsaNI GTAC 1 cut(s) 867
RseI CAYNNNNRTG 1 cut(s) 1401
SatI GCNGC 2 cut(s) 1195, 1300
Sau3AI GATC 3 cut(s) 628, 1320, 1432
Sau96I GGNCC 3 cut(s) 167, 873, 1314
SchI GAGTC 6 cut(s) 98, 239, 245, 307, 596, 842
ScrFI CCNGG 1 cut(s) 871
SfaNI GCATC 2 cut(s) 508, 519
SfcI CTRYAG 1 cut(s) 1244
SinI GGWCC 1 cut(s) 167
SmiMI CAYNNNNRTG 1 cut(s) 1401
SsiI CCGC 2 cut(s) 1228, 1302
SspMI CTAG 2 cut(s) 575, 752
StyD4I CCNGG 1 cut(s) 869
StyI CCWWGG 1 cut(s) 474
TaaI ACNGT 4 cut(s) 244, 698, 899, 931
TaiI ACGT 1 cut(s) 1332
TaqI TCGA 1 cut(s) 1157
TfiI GAWTC 4 cut(s) 906, 1034, 1145, 1249
TscAI CASTG 4 cut(s) 247, 408, 703, 1267
TseFI GTSAC 2 cut(s) 599, 1406
TseI GCWGC 2 cut(s) 1194, 1299
Tsp45I GTSAC 2 cut(s) 599, 1406
TspDTI ATGAA 3 cut(s) 60, 125, 177
TspRI CASTG 4 cut(s) 247, 408, 703, 1267
Van91I CCANNNNNTGG 1 cut(s) 849
VpaK11BI GGWCC 1 cut(s) 167
VspI ATTAAT 1 cut(s) 341
XapI RAATTY 7 cut(s) 205, 256, 292, 939, 964, 1019, 1370
XcmI CCANNNNNNNNNTGG 1 cut(s) 481
XmiI GTMKAC 1 cut(s) 987
XmnI GAANNNNTTC 1 cut(s) 910
XspI CTAG 2 cut(s) 575, 752
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.