Rmu_sc0001621.1_g000016

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001621.1
Physical Location & Seq
Reverse (-)
64196 .. 65998
1803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001621.1_g000016.1.cds

Sequence Viewer

Length: 1659 bp
atgtatggctttcatcaatccacaataggtggccatcatgagcagtttattcaacgacagacttcatctttggtcgatgtatctacgatatttggccgagaagaagaagaagagtatttgttgagcaagttgttgagagagagtaatcaagatggggggaggttccttgtcatccatattgtagggatgggagggatggggaaaactactcttgcccaactggcctataacaatgaaaagattacagcccatttcaacaagaaagtatgggtttgtgtctcagacccttttgatgaggttaagattgcgaaagcgattattgaaaatctagatggaacccaaagcagttcaaatgagttggaaattttattgcaatctatcaagagacaagttgaggatgagaagtttcttcttgtactagatgatgtgtggacggaagaccctaaaaagtgggaaaatttgaaactaccaattataatgcaaagttgtgctaagggcagtacaatactggtgaccacgcgaaaagaaggggttgctaaaatgatgagagcaaccaaaagcacaatccatttggacaagttgagcgatagggattgtctcgcattgttcaatagctttgcatttttggatagggaagaagatgaggctaacgggtttggagctattggtgaggaaattgtgaaaaagtgtaaaggtttgcctcttgctgcaaaaactttaggcagtctagtgtggtataagaaaacaagagaggaatggcgggatgttctgaatagtaagatatgggaactagaagaagttgaggaacaagttttccgaccactattactaagttattatgatttggcccctgcaattaaaagatgccttttgtattgtgctatatttcccaaagattatgagttaagaaaagaaaatttgattgagctttggatgtcacaaggttatcttaattcaaagggaaacaaagataagagaagaatagaagcagttgagggtgctaatcaaagaatggagctaccgggtgataaagttcgtcatttgaccctaacaagtgtacccgaaggtacactttcatttcctacttcatttgacaactgcaaaaatgtacgaaccctcacactccttgattcaagcattacaaccataatcccgggttcaattatgcaaatgaaatgcctcaggacattgaatttacgtcgtaacaagctcaatgaagttccaaaagagattggtgaattgattcatttgagatatatggatctgtcttataatcgtgatttcaaagaattaccggatgctgtgtgtgatttatacactctacaaactctggtcctggagttctgtaataaactagagaaactacccaaggcaatgggaaagttgattaacttgaagcatctatatgttgggggttgttctaagctgaggtacttaccaaaagggattgggagtttgaaaagtctgcaagtactggactgcttttatgtatgtgagggtgatgatgaagcattgaaattaggagatctcggaatcatggaccagctccaggggcgcctttggatacaaggattggggaaagatgatgcaagagagattgagaaagcacagttggggaataaggagcacctctcatttgggaatatggttcccaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

552

Amino Acids

62.89

Weight (kDa)

6.28

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 476, 1272
AccB1I GGYRCC 1 cut(s) 1554
AccII CGCG 1 cut(s) 520
AciI CCGC 1 cut(s) 760
AclWI GGATC 1 cut(s) 1269
AcoI YGGCCR 2 cut(s) 31, 94
AcsI RAATTY 4 cut(s) 363, 457, 916, 1192
AcyI GRCGYC 1 cut(s) 1555
AfaI GTAC 7 cut(s) 417, 502, 1059, 1069, 1110, 1433, 1473
AfiI CCNNNNNNNGG 1 cut(s) 1549
AjnI CCWGG 2 cut(s) 1335, 1548
AjuI GAANNNNNNNTTGG 2 cut(s) 1595, 1627
AloI GAACNNNNNNTCC 2 cut(s) 798, 830
AluBI AGCT 7 cut(s) 615, 662, 928, 1018, 1210, 1426, 1546
AluI AGCT 7 cut(s) 615, 662, 928, 1018, 1210, 1426, 1546
Alw21I GWGCWC 1 cut(s) 1629
Alw26I GTCTC 3 cut(s) 283, 379, 602
AlwI GGATC 1 cut(s) 1269
Ama87I CYCGRG 1 cut(s) 1153
AoxI GGCC 4 cut(s) 31, 94, 222, 846
ApeKI GCWGC 1 cut(s) 707
ApoI RAATTY 4 cut(s) 363, 457, 916, 1192
ArsI GACNNNNNNTTYG 2 cut(s) 52, 84
Asp700I GAANNNNTTC 1 cut(s) 1242
AspLEI GCGC 1 cut(s) 1557
AspS9I GGNCC 3 cut(s) 847, 1333, 1540
AsuC2I CCSGG 3 cut(s) 1023, 1154, 1155
AsuHPI GGTGA 5 cut(s) 523, 680, 1037, 1247, 1511
AvaI CYCGRG 1 cut(s) 1153
AvaII GGWCC 2 cut(s) 1333, 1540
AxyI CCTNAGG 1 cut(s) 1181
BaeI ACNNNNGTAYC 2 cut(s) 1041, 1074
BalI TGGCCA 1 cut(s) 33
BanI GGYRCC 1 cut(s) 1554
BbsI GAAGAC 1 cut(s) 444
Bbv12I GWGCWC 1 cut(s) 1629
BbvCI CCTCAGC 1 cut(s) 1427
BbvI GCAGC 1 cut(s) 694
BccI CCATC 5 cut(s) 42, 146, 181, 190, 326
BciT130I CCWGG 2 cut(s) 1337, 1550
BciVI GTATCC 1 cut(s) 1557
BcnI CCSGG 3 cut(s) 1023, 1154, 1155
BcoDI GTCTC 3 cut(s) 283, 379, 602
BfaI CTAG 5 cut(s) 329, 419, 728, 791, 1355
BfoI RGCGCY 1 cut(s) 1558
BfuI GTATCC 1 cut(s) 1557
BglI GCCNNNNNGGC 1 cut(s) 221
BglII AGATCT 1 cut(s) 1525
BisI GCNGC 1 cut(s) 708
BlsI GCNGC 1 cut(s) 709
BmcAI AGTACT 1 cut(s) 1473
Bme1390I CCNGG 5 cut(s) 1023, 1154, 1155, 1337, 1550
Bme18I GGWCC 2 cut(s) 1333, 1540
BmeT110I CYCGRG 1 cut(s) 1153
BmgT120I GGNCC 3 cut(s) 847, 1333, 1540
BmiI GGNNCC 5 cut(s) 164, 337, 849, 1556, 1650
BmrFI CCNGG 5 cut(s) 1023, 1154, 1155, 1337, 1550
BmsI GCATC 4 cut(s) 854, 1288, 1408, 1576
BpiI GAAGAC 1 cut(s) 444
BplI GAGNNNNNCTC 2 cut(s) 1616, 1648
BpmI CTGGAG 2 cut(s) 1358, 1532
Bpu10I CCTNAGC 2 cut(s) 492, 1427
BpuMI CCSGG 3 cut(s) 1023, 1154, 1155
BsaHI GRCGYC 1 cut(s) 1555
BsaJI CCNNGG 3 cut(s) 1153, 1368, 1549
BsaWI WCCGGW 1 cut(s) 1294
Bsc4I CCNNNNNNNGG 1 cut(s) 1549
Bse1I ACTGG 3 cut(s) 225, 513, 1479
Bse21I CCTNAGG 1 cut(s) 1181
Bse3DI GCAATG 1 cut(s) 1380
BseBI CCWGG 2 cut(s) 1337, 1550
BseDI CCNNGG 3 cut(s) 1153, 1368, 1549
BseGI GGATG 7 cut(s) 171, 192, 201, 403, 769, 939, 1303
BseLI CCNNNNNNNGG 1 cut(s) 1549
BseMI GCAATG 1 cut(s) 1380
BseMII CTCAG 3 cut(s) 294, 1195, 1418
BseNI ACTGG 3 cut(s) 225, 513, 1479
BseXI GCAGC 1 cut(s) 694
Bsh1236I CGCG 1 cut(s) 520
BshFI GGCC 4 cut(s) 33, 96, 224, 848
BshNI GGYRCC 1 cut(s) 1554
BsiHKAI GWGCWC 1 cut(s) 1629
BsiHKCI CYCGRG 1 cut(s) 1153
BsiSI CCGG 3 cut(s) 1022, 1154, 1295
BslI CCNNNNNNNGG 1 cut(s) 1549
BsmAI GTCTC 3 cut(s) 283, 379, 602
BsnI GGCC 4 cut(s) 33, 96, 224, 848
BsoBI CYCGRG 1 cut(s) 1153
Bsp1286I GDGCHC 1 cut(s) 1629
Bsp143I GATC 2 cut(s) 1261, 1525
BspACI CCGC 1 cut(s) 760
BspANI GGCC 4 cut(s) 33, 96, 224, 848
BspCNI CTCAG 3 cut(s) 293, 1194, 1419
BspFNI CGCG 1 cut(s) 520
BspHI TCATGA 1 cut(s) 37
BspLI GGNNCC 5 cut(s) 164, 337, 849, 1556, 1650
BspPI GGATC 1 cut(s) 1269
BspT107I GGYRCC 1 cut(s) 1554
BsrDI GCAATG 1 cut(s) 1380
BsrI ACTGG 3 cut(s) 225, 513, 1479
BssECI CCNNGG 3 cut(s) 1153, 1368, 1549
BssMI GATC 2 cut(s) 1261, 1525
BssNI GRCGYC 1 cut(s) 1555
BssT1I CCWWGG 1 cut(s) 1368
Bst2UI CCWGG 2 cut(s) 1337, 1550
Bst4CI ACNGT 1 cut(s) 1611
Bst6I CTCTTC 1 cut(s) 105
BstACI GRCGYC 1 cut(s) 1555
BstDEI CTNAG 6 cut(s) 280, 492, 830, 1181, 1422, 1427
BstEII GGTNACC 1 cut(s) 511
BstF5I GGATG 7 cut(s) 171, 192, 201, 403, 769, 939, 1303
BstFNI CGCG 1 cut(s) 520
BstH2I RGCGCY 1 cut(s) 1558
BstHHI GCGC 1 cut(s) 1557
BstKTI GATC 2 cut(s) 1264, 1528
BstMAI GTCTC 3 cut(s) 283, 379, 602
BstMBI GATC 2 cut(s) 1261, 1525
BstMWI GCNNNNNNNGC 2 cut(s) 221, 1552
BstNI CCWGG 2 cut(s) 1337, 1550
BstPI GGTNACC 1 cut(s) 511
BstSCI CCNGG 5 cut(s) 1021, 1152, 1153, 1335, 1548
BstUI CGCG 1 cut(s) 520
BstV1I GCAGC 1 cut(s) 694
BstV2I GAAGAC 1 cut(s) 444
BstX2I RGATCY 2 cut(s) 1261, 1525
BstXI CCANNNNNNTGG 1 cut(s) 1375
BstYI RGATCY 2 cut(s) 1261, 1525
Bsu36I CCTNAGG 1 cut(s) 1181
BsuI GTATCC 1 cut(s) 1557
BsuRI GGCC 4 cut(s) 33, 96, 224, 848
BtsCI GGATG 7 cut(s) 171, 192, 201, 403, 769, 939, 1303
CciI TCATGA 1 cut(s) 37
CfoI GCGC 1 cut(s) 1557
Cfr13I GGNCC 3 cut(s) 847, 1333, 1540
Cfr9I CCCGGG 1 cut(s) 1153
Csp6I GTAC 7 cut(s) 416, 501, 1058, 1068, 1109, 1432, 1472
CviAII CATG 2 cut(s) 38, 1537
CviQI GTAC 7 cut(s) 416, 501, 1058, 1068, 1109, 1432, 1472
DdeI CTNAG 6 cut(s) 280, 492, 830, 1181, 1422, 1427
DinI GGCGCC 1 cut(s) 1556
DpnI GATC 2 cut(s) 1263, 1527
DpnII GATC 2 cut(s) 1261, 1525
EaeI YGGCCR 2 cut(s) 31, 94
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 1368
Eco47I GGWCC 2 cut(s) 1333, 1540
Eco81I CCTNAGG 1 cut(s) 1181
Eco88I CYCGRG 1 cut(s) 1153
Eco91I GGTNACC 1 cut(s) 511
EcoO65I GGTNACC 1 cut(s) 511
EcoRII CCWGG 2 cut(s) 1335, 1548
EcoT14I CCWWGG 1 cut(s) 1368
EgeI GGCGCC 1 cut(s) 1556
EheI GGCGCC 1 cut(s) 1556
ErhI CCWWGG 1 cut(s) 1368
FaeI CATG 2 cut(s) 41, 1540
FalI AAGNNNNNCTT 4 cut(s) 933, 965, 1056, 1088
FatI CATG 2 cut(s) 37, 1536
FauI CCCGC 1 cut(s) 753
Fnu4HI GCNGC 1 cut(s) 708
FokI GGATG 7 cut(s) 158, 199, 208, 410, 776, 946, 1310
Fsp4HI GCNGC 1 cut(s) 708
FspBI CTAG 5 cut(s) 329, 419, 728, 791, 1355
GlaI GCGC 1 cut(s) 1556
GluI GCNGC 1 cut(s) 708
GsuI CTGGAG 2 cut(s) 1358, 1532
HaeII RGCGCY 1 cut(s) 1558
HaeIII GGCC 4 cut(s) 33, 96, 224, 848
HapII CCGG 3 cut(s) 1022, 1154, 1295
HhaI GCGC 1 cut(s) 1557
Hin1I GRCGYC 1 cut(s) 1555
Hin1II CATG 2 cut(s) 41, 1540
Hin6I GCGC 1 cut(s) 1555
HinP1I GCGC 1 cut(s) 1555
HinfI GANTC 3 cut(s) 1130, 1243, 1533
HpaII CCGG 3 cut(s) 1022, 1154, 1295
HphI GGTGA 5 cut(s) 523, 680, 1037, 1247, 1511
Hpy166II GTNNAC 3 cut(s) 432, 1058, 1070
Hpy188I TCNGA 4 cut(s) 283, 771, 818, 1532
Hpy188III TCNNGA 6 cut(s) 38, 149, 329, 382, 1183, 1277
Hpy8I GTNNAC 3 cut(s) 432, 1058, 1070
Hpy99I CGWCG 1 cut(s) 1203
HpyAV CCTTC 2 cut(s) 521, 1058
HpyCH4III ACNGT 1 cut(s) 1611
HpyCH4IV ACGT 1 cut(s) 1198
HpyCH4V TGCA 9 cut(s) 373, 481, 620, 710, 854, 1101, 1168, 1468, 1589
HpyF10VI GCNNNNNNNGC 2 cut(s) 221, 1552
HpyF3I CTNAG 6 cut(s) 280, 492, 830, 1181, 1422, 1427
HpySE526I ACGT 1 cut(s) 1198
Hsp92I GRCGYC 1 cut(s) 1555
Hsp92II CATG 2 cut(s) 41, 1540
HspAI GCGC 1 cut(s) 1555
KasI GGCGCC 1 cut(s) 1554
Kzo9I GATC 2 cut(s) 1261, 1525
LmnI GCTCC 4 cut(s) 659, 1015, 1551, 1624
Lsp1109I GCAGC 1 cut(s) 694
LweI GCATC 4 cut(s) 854, 1288, 1408, 1576
MaeI CTAG 5 cut(s) 329, 419, 728, 791, 1355
MaeII ACGT 1 cut(s) 1198
MaeIII GTNAC 3 cut(s) 511, 936, 1202
MalI GATC 2 cut(s) 1263, 1527
MboI GATC 2 cut(s) 1261, 1525
MfeI CAATTG 1 cut(s) 1654
MflI RGATCY 2 cut(s) 1261, 1525
MhlI GDGCHC 1 cut(s) 1629
MlsI TGGCCA 1 cut(s) 33
MluNI TGGCCA 1 cut(s) 33
Mly113I GGCGCC 1 cut(s) 1555
MmeI TCCRAC 2 cut(s) 339, 841
Mox20I TGGCCA 1 cut(s) 33
MroXI GAANNNNTTC 1 cut(s) 1242
MscI TGGCCA 1 cut(s) 33
MseI TTAA 5 cut(s) 300, 858, 905, 951, 1389
MslI CAYNNNNRTG 1 cut(s) 1404
Msp20I TGGCCA 1 cut(s) 33
MspI CCGG 3 cut(s) 1022, 1154, 1295
MspR9I CCNGG 5 cut(s) 1023, 1154, 1155, 1337, 1550
MunI CAATTG 1 cut(s) 1654
MvaI CCWGG 2 cut(s) 1337, 1550
MvnI CGCG 1 cut(s) 520
MwoI GCNNNNNNNGC 2 cut(s) 221, 1552
NarI GGCGCC 1 cut(s) 1555
NciI CCSGG 3 cut(s) 1023, 1154, 1155
NdeII GATC 2 cut(s) 1261, 1525
NlaIII CATG 2 cut(s) 41, 1540
NlaIV GGNNCC 5 cut(s) 164, 337, 849, 1556, 1650
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 2 cut(s) 511, 936
PagI TCATGA 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 3 cut(s) 1130, 1243, 1533
PfoI TCCNGGA 1 cut(s) 1335
PkrI GCNGC 1 cut(s) 709
PluTI GGCGCC 1 cut(s) 1558
PsiI TTATAA 2 cut(s) 476, 1272
Psp6I CCWGG 2 cut(s) 1335, 1548
PspEI GGTNACC 1 cut(s) 511
PspGI CCWGG 2 cut(s) 1335, 1548
PspN4I GGNNCC 5 cut(s) 164, 337, 849, 1556, 1650
PspPI GGNCC 3 cut(s) 847, 1333, 1540
PsuI RGATCY 2 cut(s) 1261, 1525
RsaI GTAC 7 cut(s) 417, 502, 1059, 1069, 1110, 1433, 1473
RsaNI GTAC 7 cut(s) 416, 501, 1058, 1068, 1109, 1432, 1472
RseI CAYNNNNRTG 1 cut(s) 1404
SaqAI TTAA 5 cut(s) 300, 858, 905, 951, 1389
SatI GCNGC 1 cut(s) 708
Sau3AI GATC 2 cut(s) 1261, 1525
Sau96I GGNCC 3 cut(s) 847, 1333, 1540
ScaI AGTACT 1 cut(s) 1473
ScrFI CCNGG 5 cut(s) 1023, 1154, 1155, 1337, 1550
SduI GDGCHC 1 cut(s) 1629
SfaNI GCATC 4 cut(s) 854, 1288, 1408, 1576
SfoI GGCGCC 1 cut(s) 1556
SinI GGWCC 2 cut(s) 1333, 1540
SmaI CCCGGG 1 cut(s) 1155
SmiMI CAYNNNNRTG 1 cut(s) 1404
SsiI CCGC 1 cut(s) 760
SspDI GGCGCC 1 cut(s) 1554
SspMI CTAG 5 cut(s) 329, 419, 728, 791, 1355
StyD4I CCNGG 5 cut(s) 1021, 1152, 1153, 1335, 1548
StyI CCWWGG 1 cut(s) 1368
TaaI ACNGT 1 cut(s) 1611
TaiI ACGT 1 cut(s) 1201
TaqI TCGA 1 cut(s) 75
TatI WGTACW 3 cut(s) 415, 500, 1471
TfiI GAWTC 3 cut(s) 1130, 1243, 1533
Tru1I TTAA 5 cut(s) 300, 858, 905, 951, 1389
Tru9I TTAA 5 cut(s) 300, 858, 905, 951, 1389
TseFI GTSAC 2 cut(s) 511, 936
TseI GCWGC 1 cut(s) 707
Tsp45I GTSAC 2 cut(s) 511, 936
TspDTI ATGAA 8 cut(s) 54, 249, 1065, 1077, 1187, 1230, 1235, 1521
TspGWI ACGGA 1 cut(s) 449
TspMI CCCGGG 1 cut(s) 1153
VpaK11BI GGWCC 2 cut(s) 1333, 1540
XapI RAATTY 4 cut(s) 363, 457, 916, 1192
XbaI TCTAGA 1 cut(s) 328
XmaI CCCGGG 1 cut(s) 1153
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 5 cut(s) 329, 419, 728, 791, 1355
ZrmI AGTACT 1 cut(s) 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.