Prupe.3G092700_v2.0.a1

disease resistance protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
6922911 .. 6927431
4521 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G092700.1

Sequence Viewer

Length: 2985 bp
ATGGCTGATGCACTCGTTTATGTAGTTCTACAACAATTGGCTTCAACAACATATCAGCAAATAGAAAAAGAGGTGAAATTGGTCTTGGATGTTAAGAAAGAAGTTGCAAAAATCACCAGCAATCTCAAAGCTATTCAAGCCGTTCTCGATGATGCAGAGAAGAGGCAAGTGAAGGAAGCCGTCGTGAGAGATTGGTTGGATAAGCTGACAGATGTATCGTACGAGATGGACGACGTGCTGGACGAGTGGAACACTAAAATTTTGATGCAACAAGTTGACAACCAAGAAAAAGAAGGTGATATAACTCTTCTTGTTACCAAGAAGAAGGTACGTTTGTTTATTCCCTTCGATTGCTTTTGTTTTGGCCATGTCAGTCGAGTAATTCTTCGTCGCGACATTAAGCTTAAGCTAAAAGATCTGAATAACAAGTTGACTGTGATTGCTAAAGAACGAAAAGCATATAAGTTTCAACACACAGAAGGAAGAGTTGAACAACCTGAACGGCAAAAAAGTTCATCGTTTGTTGATATATCTAAGACATTTGGCCGAGAAAATGAAAAAGATATTATAGTAAACAAGTTGTTGAGTGAGAGTAGTCAAGAAATTGTAACGGGTCCCCTTGTTATCCCCATTGTGGGGATGGGAGGAATGGGAAAGACAACTCTTGCACAACTAGCCTATAATGATGAAAATGTAAAAGCGCATTTCGAAAGGAGAATATGGGTTTGTGTCTCTGATCCTTTTGATGAGATAAAGATTGCCAAGGCCATCATTGATGGTAATGGAACCCCAAACTCAGATGAATTGGAAGCTTTCTTGCAATGTATGTCAAAATCTATAGAAGGGGAAAAGTTCCTCCTTGTCCTAGATGATGTGTGGACTCAAGACCACAGAAAGTGGGAACAATTAAAGTTACCTTTGCTGAAAGGTGCTATGGGTAGTAGAATACTGGTGACCACACGAAAAGAGGAAGTTGCTATTATGATGGGAGCAAAGAGGAGCCACATGATCCATTTGAAGCAATTGAGTGAAGAATCATGTTGGTCCTTATTTTATCACCTTGCATTCTTTGACAAGGAAGAAGATGAATCTAATGTGTTTGAAGCTATTGGTAAGGAAATTGTCAAAAAGTGTAAGGGTTTGCCTCTTGCTGCAAAGGCTTTAGGTAGTCTCATGCGCTTTAAGAAAACTAAGAAAGAATGGGAAGATGTCTTGCGCAGTGAGATATGGGAACTTGAAGAGGTTGAACAAGAAGTTTTTCAACCGTTATTGCTAAGTTATTATGATTTGGCGTCGGGGGTCAAACGTTGTCTTTTGTATTGTGTTATTTTTCCAAAAGATTATGAGTTCAATAAAGATAATTTGATTGAGTTGTGGATGTCACAAGATTATCTTAGTTTGGAAAGAAACCAAGAAAAGGAAATAGTAGGTGAAAACTATTTCAATAACTTAGTAATGCGGTCATGGTTTCAAGATTTTAAGAAAGATGACAACGGCAATACTACCGTCAAAATGCATGATATTGTGCATGACTTTGTGCAGTTTCTTAACCAAAGGGAATGTTACATCATGATTGTCAAGGATGCTAACAAGAGAATTGAGCTACCAAGTGATAAGGTCCGCCATTTGACCTTAATCCTTGCATCGGATAACCAAATTGCATGTTCTATTTCATTATCACCTCCTGTTTCATTTGACAATTGCAAAGTTCTGCGCACCCTGTCATGTTTTGATTCAAGAATCACTAGCTTAGACCCAGATCTCATTTTGCAATTGAAAGGCCTTAGGACATTAAATTTGAGTGGTAACATTTTCAATGAACTTCCAAAGGAGATTGGCGAATTGATACATTTGAGGTACATTGATTTGTCTGGTAATCATCATATGAATGAATTACCAAACACTATGTGTAATTTATACAATCTACAAACCTTGCACCTCACTGGGTGCAGGCAGCTTGCAAAACTACCTAAGGCCATAGGGAAGCTGATTAACTTAAGGCATCTTCATATTAAGAGCTGTTATGCGTTGAAGTACTTGCCAAAAGGGATTGGGAGATTAAGAAGTCTGCAGGTATTAGATGGGTTTAGTGTATGTGCTGCTGACAACAGTGAAACACTCCAGTTAGGTGATCTGGGAATCTTGGACAAGCTTCAGGGTAGCCTTTTTATCAAAGGGCTGGGGAATGTGAGAGACGCTAGTGAGGCTGAGAAAGCACAATTAGCGAATAAAAGACACATCCTTTGTTTGGAACTAGATTTTTCGAATGGAGATAAGCGACGACAAGGAGAAAGAGATGGAGAAATGCTGAGTTTCTTAGAACCACCTCAAAGTTTGGAATTTTTAAGCATTAGTTGTTACTGTGGCGGCACCTTCAGCTCTCCCAACTGGATGATTTCTCTACCTAATTTGAGAACCCTTGTTCTTCGTTCTTGGAAAAATTGTGATTTTTTGCCTCCTCTTGGGAAATTGCCGTCCCTTCAAATATTGAGCATAGATGATATGCCTAGTGTGAGAAAGGTTGGAGCTGAATTTTTGGGAATAAAAGAAACTTCAGCATTGTTAAAATCATCCTCACCAACTGTTTCATTCCCAAAATTGAAAAAGCTCAGCTTCTCTGGAATGTGTAGTTGGGAAGAATGGGAAGGAGTGGGAGGGTCTGCGGAAGAGGATTCTGAAGTTAGAATAATGCCATGCCTTTCTTCATTGGATATTCTTAAGGCAGACAGCCTACAAACACTGCCCGACTTCCTGCGAAAGACACCACTGCGCGATTTGACTATCTATAAATGCTCTGTATTTCTTGAACACAGTTGCCAAGAACGCAGAGGAGAGGAGCATCTCAAGATTTCTCACATCCCAAACATCGAAATTAACTATAAGAGTGTTCGAGAAGACGGAGTTTGGATCCAGCAAGAGGATGAAACCGAGGAAACGGATAGTTCTGACTCTGATGAGGATGATGATGGGATTGCACAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

995

Amino Acids

113.51

Weight (kDa)

5.62

Isoelectric Point (pI)

48.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 1217, 1715
Acc36I ACCTGC 1 cut(s) 2062
AccB1I GGYRCC 1 cut(s) 2369
AccII CGCG 2 cut(s) 393, 2772
AciI CCGC 4 cut(s) 1459, 1621, 2367, 2663
AclI AACGTT 1 cut(s) 1306
AclWI GGATC 4 cut(s) 731, 1003, 2902, 2915
AcoI YGGCCR 2 cut(s) 364, 544
AcsI RAATTY 4 cut(s) 258, 1795, 2339, 2531
AcuI CTGAAG 4 cut(s) 2138, 2359, 2538, 2697
AcyI GRCGYC 1 cut(s) 1292
AdeI CACNNNGTG 2 cut(s) 1908, 1947
AfaI GTAC 4 cut(s) 221, 330, 1859, 2036
AfiI CCNNNNNNNGG 8 cut(s) 634, 635, 636, 1417, 1645, 2248, 2462, 2917
AflII CTTAAG 3 cut(s) 404, 1996, 2717
AjiI CACGTC 1 cut(s) 235
AjuI GAANNNNNNNTTGG 4 cut(s) 68, 100, 2614, 2646
Alw26I GTCTC 3 cut(s) 736, 1175, 2187
AlwI GGATC 4 cut(s) 731, 1003, 2902, 2915
AoxI GGCC 5 cut(s) 364, 544, 765, 1780, 1974
ApeKI GCWGC 3 cut(s) 1151, 1954, 2099
ApoI RAATTY 4 cut(s) 258, 1795, 2339, 2531
ArsI GACNNNNNNTTYG 4 cut(s) 1780, 1812, 2226, 2258
Asp700I GAANNNNTTC 1 cut(s) 1257
AspLEI GCGC 5 cut(s) 703, 1179, 1218, 1716, 2772
AspS9I GGNCC 3 cut(s) 614, 1044, 1618
AsuHPI GGTGA 9 cut(s) 85, 106, 308, 964, 1049, 1442, 1671, 2141, 2568
AsuII TTCGAA 2 cut(s) 708, 2264
AvaII GGWCC 3 cut(s) 614, 1044, 1618
AxyI CCTNAGG 2 cut(s) 1784, 1971
BaeI ACNNNNGTAYC 4 cut(s) 198, 231, 320, 353
BalI TGGCCA 1 cut(s) 366
BamHI GGATCC 1 cut(s) 2907
BanI GGYRCC 1 cut(s) 2369
BbsI GAAGAC 1 cut(s) 2901
BbvI GCAGC 3 cut(s) 1138, 1966, 2086
BccI CCATC 8 cut(s) 220, 634, 770, 776, 979, 2075, 2291, 2960
BceAI ACGGC 5 cut(s) 125, 164, 518, 1510, 2458
BcoDI GTCTC 3 cut(s) 736, 1175, 2187
BfaI CTAG 6 cut(s) 674, 866, 1746, 2199, 2255, 2508
BfmI CTRYAG 2 cut(s) 837, 2069
BfrI CTTAAG 3 cut(s) 404, 1996, 2717
BfuAI ACCTGC 1 cut(s) 2062
BglII AGATCT 2 cut(s) 415, 1759
BisI GCNGC 4 cut(s) 1152, 1955, 2100, 2368
BlpI GCTNAGC 1 cut(s) 2609
BlsI GCNGC 4 cut(s) 1153, 1956, 2101, 2369
BmcAI AGTACT 1 cut(s) 2036
Bme18I GGWCC 3 cut(s) 614, 1044, 1618
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 3 cut(s) 614, 1044, 1618
BmiI GGNNCC 6 cut(s) 615, 616, 787, 1001, 2371, 2909
BmrI ACTGGG 1 cut(s) 1953
BmsI GCATC 6 cut(s) 142, 255, 1573, 1652, 2011, 2848
BmuI ACTGGG 1 cut(s) 1953
BpiI GAAGAC 1 cut(s) 2901
BpmI CTGGAG 1 cut(s) 2105
Bpu1102I GCTNAGC 1 cut(s) 2609
Bpu14I TTCGAA 2 cut(s) 708, 2264
BpuEI CTTGAG 2 cut(s) 867, 2828
BsaHI GRCGYC 1 cut(s) 1292
BsaJI CCNNGG 2 cut(s) 762, 2928
Bsc4I CCNNNNNNNGG 8 cut(s) 634, 635, 636, 1417, 1645, 2248, 2462, 2917
Bse1I ACTGG 4 cut(s) 954, 1948, 2122, 2393
Bse21I CCTNAGG 2 cut(s) 1784, 1971
Bse3DI GCAATG 1 cut(s) 827
BseDI CCNNGG 2 cut(s) 762, 2928
BseLI CCNNNNNNNGG 8 cut(s) 634, 635, 636, 1417, 1645, 2248, 2462, 2917
BseMI GCAATG 1 cut(s) 827
BseMII CTCAG 4 cut(s) 810, 2199, 2300, 2623
BseNI ACTGG 4 cut(s) 954, 1948, 2122, 2393
BseRI GAGGAG 4 cut(s) 1012, 2448, 2844, 2849
BseXI GCAGC 3 cut(s) 1138, 1966, 2086
BseYI CCCAGC 1 cut(s) 2179
BsgI GTGCAG 2 cut(s) 1559, 1969
Bsh1236I CGCG 2 cut(s) 393, 2772
BshFI GGCC 5 cut(s) 366, 546, 767, 1782, 1976
BshNI GGYRCC 1 cut(s) 2369
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 2 cut(s) 600, 2461
BslI CCNNNNNNNGG 8 cut(s) 634, 635, 636, 1417, 1645, 2248, 2462, 2917
BsmAI GTCTC 3 cut(s) 736, 1175, 2187
BsmBI CGTCTC 1 cut(s) 2187
BsmFI GGGAC 2 cut(s) 600, 2461
BsmI GAATGC 1 cut(s) 1064
BsnI GGCC 5 cut(s) 366, 546, 767, 1782, 1976
Bsp119I TTCGAA 2 cut(s) 708, 2264
Bsp143I GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
Bsp1720I GCTNAGC 1 cut(s) 2609
Bsp68I TCGCGA 1 cut(s) 393
BspACI CCGC 4 cut(s) 1459, 1621, 2367, 2663
BspANI GGCC 5 cut(s) 366, 546, 767, 1782, 1976
BspCNI CTCAG 4 cut(s) 809, 2200, 2301, 2622
BspFNI CGCG 2 cut(s) 393, 2772
BspHI TCATGA 1 cut(s) 1569
BspLI GGNNCC 6 cut(s) 615, 616, 787, 1001, 2371, 2909
BspMAI CTGCAG 1 cut(s) 2073
BspMI ACCTGC 1 cut(s) 2062
BspPI GGATC 4 cut(s) 731, 1003, 2902, 2915
BspT104I TTCGAA 2 cut(s) 708, 2264
BspT107I GGYRCC 1 cut(s) 2369
BspTI CTTAAG 3 cut(s) 404, 1996, 2717
BsrDI GCAATG 1 cut(s) 827
BsrI ACTGG 4 cut(s) 954, 1948, 2122, 2393
BssECI CCNNGG 2 cut(s) 762, 2928
BssMI GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
BssNI GRCGYC 1 cut(s) 1292
BssT1I CCWWGG 1 cut(s) 762
Bst4CI ACNGT 7 cut(s) 436, 1266, 1507, 2111, 2363, 2584, 2813
Bst6I CTCTTC 5 cut(s) 155, 312, 478, 1233, 2661
BstACI GRCGYC 1 cut(s) 1292
BstAFI CTTAAG 3 cut(s) 404, 1996, 2717
BstBI TTCGAA 2 cut(s) 708, 2264
BstC8I GCNNGC 2 cut(s) 1952, 1959
BstEII GGTNACC 1 cut(s) 952
BstFNI CGCG 2 cut(s) 393, 2772
BstHHI GCGC 5 cut(s) 703, 1179, 1218, 1716, 2772
BstKTI GATC 6 cut(s) 418, 739, 1011, 1762, 2134, 2910
BstMAI GTCTC 3 cut(s) 736, 1175, 2187
BstMBI GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
BstMWI GCNNNNNNNGC 8 cut(s) 137, 674, 1157, 2204, 2213, 2222, 2376, 2823
BstNSI RCATGY 1 cut(s) 1665
BstPI GGTNACC 1 cut(s) 952
BstSFI CTRYAG 2 cut(s) 837, 2069
BstUI CGCG 2 cut(s) 393, 2772
BstV1I GCAGC 3 cut(s) 1138, 1966, 2086
BstV2I GAAGAC 1 cut(s) 2901
BstX2I RGATCY 3 cut(s) 415, 1759, 2907
BstYI RGATCY 3 cut(s) 415, 1759, 2907
Bsu36I CCTNAGG 2 cut(s) 1784, 1971
BsuRI GGCC 5 cut(s) 366, 546, 767, 1782, 1976
BtrI CACGTC 1 cut(s) 235
BtsI GCAGTG 3 cut(s) 1225, 2738, 2765
BtsIMutI CAGTG 5 cut(s) 1225, 1941, 2116, 2738, 2765
BtuMI TCGCGA 1 cut(s) 393
BveI ACCTGC 1 cut(s) 2062
Cac8I GCNNGC 2 cut(s) 1952, 1959
CciI TCATGA 1 cut(s) 1569
CfoI GCGC 5 cut(s) 703, 1179, 1218, 1716, 2772
Cfr13I GGNCC 3 cut(s) 614, 1044, 1618
CseI GACGC 2 cut(s) 1281, 2204
Csp6I GTAC 4 cut(s) 220, 329, 1858, 2035
CviQI GTAC 4 cut(s) 220, 329, 1858, 2035
DpnI GATC 6 cut(s) 417, 738, 1010, 1761, 2133, 2909
DpnII GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
DraIII CACNNNGTG 2 cut(s) 1908, 1947
EaeI YGGCCR 2 cut(s) 364, 544
Eam1104I CTCTTC 5 cut(s) 155, 312, 478, 1233, 2661
EarI CTCTTC 5 cut(s) 155, 312, 478, 1233, 2661
EciI GGCGGA 1 cut(s) 1610
Eco130I CCWWGG 1 cut(s) 762
Eco147I AGGCCT 1 cut(s) 1782
Eco47I GGWCC 3 cut(s) 614, 1044, 1618
Eco57I CTGAAG 4 cut(s) 2138, 2359, 2538, 2697
Eco81I CCTNAGG 2 cut(s) 1784, 1971
Eco91I GGTNACC 1 cut(s) 952
EcoO109I RGGNCCY 1 cut(s) 614
EcoO65I GGTNACC 1 cut(s) 952
EcoT14I CCWWGG 1 cut(s) 762
EcoT22I ATGCAT 1 cut(s) 1518
ErhI CCWWGG 1 cut(s) 762
Esp3I CGTCTC 1 cut(s) 2187
FalI AAGNNNNNCTT 4 cut(s) 1377, 1409, 2597, 2629
FaqI GGGAC 2 cut(s) 600, 2461
FauNDI CATATG 1 cut(s) 1884
Fnu4HI GCNGC 4 cut(s) 1152, 1955, 2100, 2368
Fsp4HI GCNGC 4 cut(s) 1152, 1955, 2100, 2368
FspBI CTAG 6 cut(s) 674, 866, 1746, 2199, 2255, 2508
FspI TGCGCA 2 cut(s) 1217, 1715
GlaI GCGC 5 cut(s) 702, 1178, 1217, 1715, 2771
GluI GCNGC 4 cut(s) 1152, 1955, 2100, 2368
GsaI CCCAGC 1 cut(s) 2183
GsuI CTGGAG 1 cut(s) 2105
HaeIII GGCC 5 cut(s) 366, 546, 767, 1782, 1976
HgaI GACGC 2 cut(s) 1281, 2204
HhaI GCGC 5 cut(s) 703, 1179, 1218, 1716, 2772
Hin1I GRCGYC 1 cut(s) 1292
Hin6I GCGC 5 cut(s) 701, 1177, 1216, 1714, 2770
HinP1I GCGC 5 cut(s) 701, 1177, 1216, 1714, 2770
HincII GTYRAC 2 cut(s) 277, 432
HindII GTYRAC 2 cut(s) 277, 432
HindIII AAGCTT 3 cut(s) 401, 810, 2150
HinfI GANTC 8 cut(s) 880, 1034, 1088, 1733, 1740, 2139, 2672, 2948
HphI GGTGA 9 cut(s) 85, 106, 308, 964, 1049, 1442, 1671, 2141, 2568
Hpy166II GTNNAC 4 cut(s) 277, 432, 574, 879
Hpy188I TCNGA 7 cut(s) 420, 736, 799, 1648, 2677, 2947, 2953
Hpy8I GTNNAC 4 cut(s) 277, 432, 574, 879
Hpy99I CGWCG 5 cut(s) 185, 236, 393, 1297, 2283
HpyAV CCTTC 9 cut(s) 166, 287, 319, 355, 473, 836, 2383, 2489, 2639
HpyCH4III ACNGT 7 cut(s) 436, 1266, 1507, 2111, 2363, 2584, 2813
HpyCH4IV ACGT 3 cut(s) 234, 331, 1306
HpyF10VI GCNNNNNNNGC 8 cut(s) 137, 674, 1157, 2204, 2213, 2222, 2376, 2823
HpySE526I ACGT 3 cut(s) 234, 331, 1306
Hsp92I GRCGYC 1 cut(s) 1292
HspAI GCGC 5 cut(s) 701, 1177, 1216, 1714, 2770
KflI GGGWCCC 1 cut(s) 614
Kzo9I GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
LmnI GCTCC 4 cut(s) 989, 999, 2525, 2836
Lsp1109I GCAGC 3 cut(s) 1138, 1966, 2086
LweI GCATC 6 cut(s) 142, 255, 1573, 1652, 2011, 2848
MaeI CTAG 6 cut(s) 674, 866, 1746, 2199, 2255, 2508
MaeII ACGT 3 cut(s) 234, 331, 1306
MaeIII GTNAC 8 cut(s) 313, 607, 912, 952, 1380, 1562, 1805, 2357
MalI GATC 6 cut(s) 417, 738, 1010, 1761, 2133, 2909
MboI GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
MfeI CAATTG 4 cut(s) 35, 1022, 1699, 1772
MflI RGATCY 3 cut(s) 415, 1759, 2907
MlsI TGGCCA 1 cut(s) 366
MluNI TGGCCA 1 cut(s) 366
MlyI GAGTC 2 cut(s) 874, 2942
MmeI TCCRAC 2 cut(s) 177, 2503
Mox20I TGGCCA 1 cut(s) 366
Mph1103I ATGCAT 1 cut(s) 1518
MroXI GAANNNNTTC 1 cut(s) 1257
MscI TGGCCA 1 cut(s) 366
MslI CAYNNNNRTG 1 cut(s) 1887
Msp20I TGGCCA 1 cut(s) 366
MspCI CTTAAG 3 cut(s) 404, 1996, 2717
MunI CAATTG 4 cut(s) 35, 1022, 1699, 1772
Mva1269I GAATGC 1 cut(s) 1064
MvnI CGCG 2 cut(s) 393, 2772
MwoI GCNNNNNNNGC 8 cut(s) 137, 674, 1157, 2204, 2213, 2222, 2376, 2823
NdeI CATATG 1 cut(s) 1884
NdeII GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
NlaIV GGNNCC 6 cut(s) 615, 616, 787, 1001, 2371, 2909
NmeAIII GCCGAG 1 cut(s) 572
NmuCI GTSAC 2 cut(s) 952, 1380
NruI TCGCGA 1 cut(s) 393
NsbI TGCGCA 2 cut(s) 1217, 1715
NsiI ATGCAT 1 cut(s) 1518
NspI RCATGY 1 cut(s) 1665
NspV TTCGAA 2 cut(s) 708, 2264
PagI TCATGA 1 cut(s) 1569
PceI AGGCCT 1 cut(s) 1782
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 240
PctI GAATGC 1 cut(s) 1064
PdmI GAANNNNTTC 1 cut(s) 1257
PfeI GAWTC 6 cut(s) 1034, 1088, 1733, 1740, 2139, 2672
Pfl23II CGTACG 1 cut(s) 219
PkrI GCNGC 4 cut(s) 1153, 1956, 2101, 2369
PleI GAGTC 2 cut(s) 874, 2942
PpsI GAGTC 2 cut(s) 874, 2942
PpuMI RGGWCCY 1 cut(s) 614
Psp1406I AACGTT 1 cut(s) 1306
Psp5II RGGWCCY 1 cut(s) 614
PspEI GGTNACC 1 cut(s) 952
PspFI CCCAGC 1 cut(s) 2179
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 6 cut(s) 615, 616, 787, 1001, 2371, 2909
PspPI GGNCC 3 cut(s) 614, 1044, 1618
PspPPI RGGWCCY 1 cut(s) 614
PstI CTGCAG 1 cut(s) 2073
PsuI RGATCY 3 cut(s) 415, 1759, 2907
RruI TCGCGA 1 cut(s) 393
RsaI GTAC 4 cut(s) 221, 330, 1859, 2036
RsaNI GTAC 4 cut(s) 220, 329, 1858, 2035
RseI CAYNNNNRTG 1 cut(s) 1887
SatI GCNGC 4 cut(s) 1152, 1955, 2100, 2368
Sau3AI GATC 6 cut(s) 415, 736, 1008, 1759, 2131, 2907
Sau96I GGNCC 3 cut(s) 614, 1044, 1618
ScaI AGTACT 1 cut(s) 2036
SchI GAGTC 2 cut(s) 874, 2942
SfaNI GCATC 6 cut(s) 142, 255, 1573, 1652, 2011, 2848
SfcI CTRYAG 2 cut(s) 837, 2069
SfuI TTCGAA 2 cut(s) 708, 2264
SinI GGWCC 3 cut(s) 614, 1044, 1618
SmiMI CAYNNNNRTG 1 cut(s) 1887
SmlI CTYRAG 5 cut(s) 404, 882, 1996, 2717, 2843
SmoI CTYRAG 5 cut(s) 404, 882, 1996, 2717, 2843
SseBI AGGCCT 1 cut(s) 1782
SsiI CCGC 4 cut(s) 1459, 1621, 2367, 2663
SspI AATATT 1 cut(s) 2487
SspMI CTAG 6 cut(s) 674, 866, 1746, 2199, 2255, 2508
StuI AGGCCT 1 cut(s) 1782
StyI CCWWGG 1 cut(s) 762
TaaI ACNGT 7 cut(s) 436, 1266, 1507, 2111, 2363, 2584, 2813
TaiI ACGT 3 cut(s) 237, 334, 1309
TaqI TCGA 7 cut(s) 147, 348, 376, 708, 2264, 2868, 2890
TatI WGTACW 1 cut(s) 2034
TauI GCSGC 1 cut(s) 2370
TfiI GAWTC 6 cut(s) 1034, 1088, 1733, 1740, 2139, 2672
TscAI CASTG 5 cut(s) 1225, 1948, 2116, 2745, 2772
TseFI GTSAC 2 cut(s) 952, 1380
TseI GCWGC 3 cut(s) 1151, 1954, 2099
Tsp45I GTSAC 2 cut(s) 952, 1380
TspGWI ACGGA 2 cut(s) 2913, 2951
TspRI CASTG 5 cut(s) 1225, 1948, 2116, 2745, 2772
Vha464I CTTAAG 3 cut(s) 404, 1996, 2717
VpaK11BI GGWCC 3 cut(s) 614, 1044, 1618
XapI RAATTY 4 cut(s) 258, 1795, 2339, 2531
XceI RCATGY 1 cut(s) 1665
XcmI CCANNNNNNNNNTGG 1 cut(s) 637
XmnI GAANNNNTTC 1 cut(s) 1257
XspI CTAG 6 cut(s) 674, 866, 1746, 2199, 2255, 2508
ZrmI AGTACT 1 cut(s) 2036
Zsp2I ATGCAT 1 cut(s) 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.