Rroxscaffold_2G00110280

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
34509939 .. 34513967
4029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00110280.1

Sequence Viewer

Length: 1308 bp
ATGAGAAAGTTGATCAACTTAAAGCATCTTCACATTGAGGAATCCAATAGCGTAAAGTTACCAAAAGACATTGGAAAATTGACAAGTCTGCAGACACTACATGGGTTTACTGTCCAGCATTTCAACGTCGATCACTATAAAATATTCACCTTAGAAGATCTGGAGAAGTTGGACCAACTTCAGGGTAGTCTACGCATAAGTGATTTAGAAGGGGATGCAGATATGGCTGAAAAGGCACAATTGGTGAAAAAGAAACACCTACTTCATTTGTCTCTAGAATTTGGGGTTGCGGATAGTAAACACCAGGAACTATTGCTGAATGCGTTGCAACCACATACCAATTTAGAAGTATTAATGATCCAAGGTTACCGGGGAATGGTACATCCAAATTGGATGATGTCATTACACAATTTGAGAAGCCTTACTCTTAAAGGCAACAAAAATTGTGAGTTTTTGCCTCCTCTGGGGAAATTGCCATCGCTTGAAGTTTTGAGAATAACATGGTTGGAAAGGGTGAAAAATCTCGGAGTTGAGTTCTTGGGAATAGAAGAATTACCAAACAGGCAAACATCATCCATTACCATTGGCAATGCCGTTGCTTTCCCGAAATTGAAACAACTCGAGCTGCATTCACTGGATAGCTTGGAAGAATGGGAAGGAGTCACAGCTGGGTGGAGCGACGAAGAAGATGATTCAGAAATTTCAATAATGCCATCTCTTTCTTCCTTACAAATTGGGTACTGCAACAAGCTGAAAAAACTGCCGGACTTGGTGTGGAAGACACCGCTGCAGAAACTGAGCATTAAATCTTGTTCAATACTCACAGGAACAGGTAGACAGTGGGCCGAGATGTCTCACATCCCAAACATCGAAATCAATAATGTGTTTGTACAGAAAGGAGGAGTTCAGCTTGTGTCGGCAACTGACGAGGACGATGAACACGATGATGAGAGCGAGCTCAGCCGTACTGATTCACTTTACTGGATTTCAACAATGCCTGAGGATATATCGACACGGCAGGTGTCTGAGGAGAGATTGACGGGGAAGGTGAAGTGGTTCAACGACTCTAAAGGTTTCGGCTTCATCACCCCGGACGACGACGACAGAGAAGATTTGTTCGTTCACTTCTCGGCGATCAAATCCGACGGCTACCGCACTATCATGGATGGCCAGGCCGTCGAATTCCAAATCGGGGTAGGCCCTCGCGGCTCGACCCAGGCCATCAACGTCACTGGCCCCAATGGCGCTGCTATGCAGGGGCAACGGAAGGAGAGAGTGGGACGGTTCGGTTGGACGAGGCGGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

435

Amino Acids

49.22

Weight (kDa)

5.72

Isoelectric Point (pI)

39.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 3 - 245 1.2e-14 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 51 - 167 3.5e-29 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 133 - 271 2e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
CSD PF00313 347 - 412 4e-24 'Cold-shock' DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1009
Acc36I ACCTGC 1 cut(s) 1009
AccI GTMKAC 2 cut(s) 190, 835
AccII CGCG 1 cut(s) 1206
AciI CCGC 6 cut(s) 290, 785, 1153, 1206, 1300, 1303
AclWI GGATC 1 cut(s) 352
AcoI YGGCCR 1 cut(s) 1168
AcsI RAATTY 3 cut(s) 278, 699, 1181
AcuI CTGAAG 1 cut(s) 164
AfaI GTAC 4 cut(s) 381, 740, 891, 967
AfiI CCNNNNNNNGG 4 cut(s) 181, 376, 464, 1192
AgsI TTSAA 7 cut(s) 124, 485, 613, 705, 816, 990, 1060
AjnI CCWGG 3 cut(s) 303, 1170, 1215
AluBI AGCT 6 cut(s) 625, 642, 668, 751, 910, 958
AluI AGCT 6 cut(s) 625, 642, 668, 751, 910, 958
Alw21I GWGCWC 1 cut(s) 960
Alw26I GTCTC 2 cut(s) 276, 858
AlwI GGATC 1 cut(s) 352
AlwNI CAGNNNCTG 1 cut(s) 796
Ama87I CYCGRG 1 cut(s) 620
AoxI GGCC 6 cut(s) 843, 1168, 1173, 1198, 1218, 1234
ApeKI GCWGC 3 cut(s) 625, 787, 1247
ApoI RAATTY 3 cut(s) 278, 699, 1181
AseI ATTAAT 1 cut(s) 353
Asp700I GAANNNNTTC 1 cut(s) 1055
AspLEI GCGC 1 cut(s) 1247
AspS9I GGNCC 4 cut(s) 172, 843, 1199, 1235
AsuC2I CCSGG 2 cut(s) 371, 1091
AsuHPI GGTGA 5 cut(s) 139, 256, 526, 1060, 1078
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 1 cut(s) 172
AxyI CCTNAGG 1 cut(s) 999
BalI TGGCCA 1 cut(s) 1170
BanII GRGCYC 1 cut(s) 960
BbsI GAAGAC 1 cut(s) 785
Bbv12I GWGCWC 1 cut(s) 960
BbvI GCAGC 3 cut(s) 612, 774, 1234
BccI CCATC 4 cut(s) 484, 721, 1160, 1229
BceAI ACGGC 5 cut(s) 578, 948, 1031, 1160, 1162
BciT130I CCWGG 3 cut(s) 305, 1172, 1217
BclI TGATCA 1 cut(s) 12
BcnI CCSGG 2 cut(s) 371, 1091
BcoDI GTCTC 2 cut(s) 276, 858
BfaI CTAG 1 cut(s) 275
BfmI CTRYAG 2 cut(s) 89, 788
BfoI RGCGCY 1 cut(s) 1248
BfuAI ACCTGC 1 cut(s) 1009
BglI GCCNNNNNGGC 2 cut(s) 1206, 1242
BglII AGATCT 1 cut(s) 157
BisI GCNGC 5 cut(s) 626, 788, 1207, 1248, 1301
BlpI GCTNAGC 1 cut(s) 959
BlsI GCNGC 5 cut(s) 627, 789, 1208, 1249, 1302
Bme1390I CCNGG 5 cut(s) 305, 371, 1091, 1172, 1217
Bme18I GGWCC 1 cut(s) 172
BmeT110I CYCGRG 1 cut(s) 620
BmgT120I GGNCC 4 cut(s) 172, 843, 1199, 1235
BmiI GGNNCC 1 cut(s) 1237
BmrFI CCNGG 5 cut(s) 305, 371, 1091, 1172, 1217
BmsI GCATC 2 cut(s) 34, 205
BpiI GAAGAC 1 cut(s) 785
BpmI CTGGAG 1 cut(s) 182
Bpu1102I GCTNAGC 1 cut(s) 959
BpuMI CCSGG 2 cut(s) 371, 1091
BsaJI CCNNGG 4 cut(s) 361, 370, 1089, 1215
Bsc4I CCNNNNNNNGG 4 cut(s) 181, 376, 464, 1192
Bse1I ACTGG 3 cut(s) 639, 986, 1237
Bse21I CCTNAGG 1 cut(s) 999
Bse3DI GCAATG 1 cut(s) 595
BseBI CCWGG 3 cut(s) 305, 1172, 1217
BseDI CCNNGG 4 cut(s) 361, 370, 1089, 1215
BseGI GGATG 6 cut(s) 220, 382, 399, 572, 858, 1171
BseLI CCNNNNNNNGG 4 cut(s) 181, 376, 464, 1192
BseMI GCAATG 1 cut(s) 595
BseMII CTCAG 4 cut(s) 788, 973, 990, 1017
BseNI ACTGG 3 cut(s) 639, 986, 1237
BseRI GAGGAG 3 cut(s) 450, 915, 1043
BseXI GCAGC 3 cut(s) 612, 774, 1234
BseYI CCCAGC 1 cut(s) 668
Bsh1236I CGCG 1 cut(s) 1206
BshFI GGCC 6 cut(s) 845, 1170, 1175, 1200, 1220, 1236
BsiHKAI GWGCWC 1 cut(s) 960
BsiHKCI CYCGRG 1 cut(s) 620
BsiSI CCGG 3 cut(s) 370, 764, 1091
BslFI GGGAC 1 cut(s) 1293
BslI CCNNNNNNNGG 4 cut(s) 181, 376, 464, 1192
BsmAI GTCTC 2 cut(s) 276, 858
BsmFI GGGAC 1 cut(s) 1293
BsmI GAATGC 2 cut(s) 325, 628
BsnI GGCC 6 cut(s) 845, 1170, 1175, 1200, 1220, 1236
BsoBI CYCGRG 1 cut(s) 620
Bsp1286I GDGCHC 1 cut(s) 960
Bsp1407I TGTACA 1 cut(s) 889
Bsp143I GATC 5 cut(s) 12, 130, 157, 357, 1134
Bsp1720I GCTNAGC 1 cut(s) 959
BspACI CCGC 6 cut(s) 290, 785, 1153, 1206, 1300, 1303
BspANI GGCC 6 cut(s) 845, 1170, 1175, 1200, 1220, 1236
BspCNI CTCAG 4 cut(s) 789, 972, 991, 1018
BspFNI CGCG 1 cut(s) 1206
BspLI GGNNCC 1 cut(s) 1237
BspMAI CTGCAG 2 cut(s) 93, 792
BspMI ACCTGC 1 cut(s) 1009
BspPI GGATC 1 cut(s) 352
BsrDI GCAATG 1 cut(s) 595
BsrGI TGTACA 1 cut(s) 889
BsrI ACTGG 3 cut(s) 639, 986, 1237
BssECI CCNNGG 4 cut(s) 361, 370, 1089, 1215
BssMI GATC 5 cut(s) 12, 130, 157, 357, 1134
BssT1I CCWWGG 1 cut(s) 361
Bst2UI CCWGG 3 cut(s) 305, 1172, 1217
Bst4CI ACNGT 3 cut(s) 112, 840, 1284
BstAUI TGTACA 1 cut(s) 889
BstC8I GCNNGC 1 cut(s) 956
BstDEI CTNAG 5 cut(s) 151, 797, 959, 999, 1026
BstEII GGTNACC 1 cut(s) 365
BstF5I GGATG 6 cut(s) 220, 382, 399, 572, 858, 1171
BstFNI CGCG 1 cut(s) 1206
BstH2I RGCGCY 1 cut(s) 1248
BstHHI GCGC 1 cut(s) 1247
BstKTI GATC 5 cut(s) 15, 133, 160, 360, 1137
BstMAI GTCTC 2 cut(s) 276, 858
BstMBI GATC 5 cut(s) 12, 130, 157, 357, 1134
BstMWI GCNNNNNNNGC 5 cut(s) 224, 233, 960, 1206, 1242
BstNI CCWGG 3 cut(s) 305, 1172, 1217
BstPI GGTNACC 1 cut(s) 365
BstSCI CCNGG 5 cut(s) 303, 369, 1089, 1170, 1215
BstSFI CTRYAG 2 cut(s) 89, 788
BstUI CGCG 1 cut(s) 1206
BstV1I GCAGC 3 cut(s) 612, 774, 1234
BstV2I GAAGAC 1 cut(s) 785
BstX2I RGATCY 1 cut(s) 157
BstYI RGATCY 1 cut(s) 157
Bsu36I CCTNAGG 1 cut(s) 999
BsuRI GGCC 6 cut(s) 845, 1170, 1175, 1200, 1220, 1236
BtgZI GCGATG 1 cut(s) 462
BtsCI GGATG 6 cut(s) 220, 382, 399, 572, 858, 1171
BtsIMutI CAGTG 3 cut(s) 632, 845, 1230
BveI ACCTGC 1 cut(s) 1009
Cac8I GCNNGC 1 cut(s) 956
CaiI CAGNNNCTG 1 cut(s) 796
CfoI GCGC 1 cut(s) 1247
Cfr13I GGNCC 4 cut(s) 172, 843, 1199, 1235
Csp6I GTAC 4 cut(s) 380, 739, 890, 966
CviAII CATG 3 cut(s) 101, 501, 1162
CviQI GTAC 4 cut(s) 380, 739, 890, 966
DdeI CTNAG 5 cut(s) 151, 797, 959, 999, 1026
DpnI GATC 5 cut(s) 14, 132, 159, 359, 1136
DpnII GATC 5 cut(s) 12, 130, 157, 357, 1134
EaeI YGGCCR 1 cut(s) 1168
Ecl136II GAGCTC 1 cut(s) 958
Eco130I CCWWGG 1 cut(s) 361
Eco24I GRGCYC 1 cut(s) 960
Eco47I GGWCC 1 cut(s) 172
Eco53kI GAGCTC 1 cut(s) 958
Eco57I CTGAAG 1 cut(s) 164
Eco81I CCTNAGG 1 cut(s) 999
Eco88I CYCGRG 1 cut(s) 620
Eco91I GGTNACC 1 cut(s) 365
EcoICRI GAGCTC 1 cut(s) 958
EcoO109I RGGNCCY 1 cut(s) 1199
EcoO65I GGTNACC 1 cut(s) 365
EcoRI GAATTC 1 cut(s) 1181
EcoRII CCWGG 3 cut(s) 303, 1170, 1215
EcoT14I CCWWGG 1 cut(s) 361
EcoT38I GRGCYC 1 cut(s) 960
ErhI CCWWGG 1 cut(s) 361
FaeI CATG 3 cut(s) 104, 504, 1165
FaiI YATR 9 cut(s) 102, 138, 197, 224, 336, 502, 1007, 1163, 1253
FaqI GGGAC 1 cut(s) 1293
FatI CATG 3 cut(s) 100, 500, 1161
FbaI TGATCA 1 cut(s) 12
FblI GTMKAC 2 cut(s) 190, 835
Fnu4HI GCNGC 5 cut(s) 626, 788, 1207, 1248, 1301
FokI GGATG 6 cut(s) 227, 369, 406, 559, 845, 1178
FriOI GRGCYC 1 cut(s) 960
Fsp4HI GCNGC 5 cut(s) 626, 788, 1207, 1248, 1301
FspBI CTAG 1 cut(s) 275
GlaI GCGC 1 cut(s) 1246
GluI GCNGC 5 cut(s) 626, 788, 1207, 1248, 1301
GsaI CCCAGC 1 cut(s) 672
GsuI CTGGAG 1 cut(s) 182
HaeII RGCGCY 1 cut(s) 1248
HaeIII GGCC 6 cut(s) 845, 1170, 1175, 1200, 1220, 1236
HapII CCGG 3 cut(s) 370, 764, 1091
HhaI GCGC 1 cut(s) 1247
Hin1II CATG 3 cut(s) 104, 504, 1165
Hin6I GCGC 1 cut(s) 1245
HinP1I GCGC 1 cut(s) 1245
HinfI GANTC 5 cut(s) 41, 660, 692, 971, 1064
HpaII CCGG 3 cut(s) 370, 764, 1091
HphI GGTGA 5 cut(s) 139, 256, 526, 1060, 1078
Hpy166II GTNNAC 5 cut(s) 108, 191, 299, 836, 1123
Hpy188I TCNGA 4 cut(s) 527, 697, 1027, 1144
Hpy188III TCNNGA 3 cut(s) 161, 275, 604
Hpy8I GTNNAC 5 cut(s) 108, 191, 299, 836, 1123
Hpy99I CGWCG 6 cut(s) 131, 683, 1100, 1103, 1148, 1181
HpyAV CCTTC 4 cut(s) 203, 650, 1039, 1261
HpyCH4III ACNGT 3 cut(s) 112, 840, 1284
HpyCH4IV ACGT 2 cut(s) 126, 1227
HpyCH4V TGCA 7 cut(s) 91, 218, 328, 628, 744, 790, 1255
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 233, 960, 1206, 1242
HpyF3I CTNAG 5 cut(s) 151, 797, 959, 999, 1026
HpySE526I ACGT 2 cut(s) 126, 1227
Hsp92II CATG 3 cut(s) 104, 504, 1165
HspAI GCGC 1 cut(s) 1245
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 5 cut(s) 12, 130, 157, 357, 1134
LmnI GCTCC 1 cut(s) 675
Lsp1109I GCAGC 3 cut(s) 612, 774, 1234
LweI GCATC 2 cut(s) 34, 205
MaeI CTAG 1 cut(s) 275
MaeII ACGT 2 cut(s) 126, 1227
MaeIII GTNAC 4 cut(s) 57, 365, 661, 1228
MalI GATC 5 cut(s) 14, 132, 159, 359, 1136
MboI GATC 5 cut(s) 12, 130, 157, 357, 1134
MboII GAAGA 9 cut(s) 20, 167, 560, 659, 695, 698, 714, 790, 1121
MfeI CAATTG 1 cut(s) 239
MflI RGATCY 1 cut(s) 157
MhlI GDGCHC 1 cut(s) 960
MlsI TGGCCA 1 cut(s) 1170
MluNI TGGCCA 1 cut(s) 1170
MlyI GAGTC 2 cut(s) 669, 1058
MmeI TCCRAC 4 cut(s) 150, 486, 1167, 1271
MnlI CCTC 9 cut(s) 31, 468, 471, 893, 922, 994, 1021, 1212, 1290
Mox20I TGGCCA 1 cut(s) 1170
MroXI GAANNNNTTC 1 cut(s) 1055
MscI TGGCCA 1 cut(s) 1170
MseI TTAA 4 cut(s) 20, 353, 429, 804
MslI CAYNNNNRTG 2 cut(s) 945, 1160
Msp20I TGGCCA 1 cut(s) 1170
MspA1I CMGCKG 2 cut(s) 668, 787
MspI CCGG 3 cut(s) 370, 764, 1091
MspR9I CCNGG 5 cut(s) 305, 371, 1091, 1172, 1217
MunI CAATTG 1 cut(s) 239
Mva1269I GAATGC 2 cut(s) 325, 628
MvaI CCWGG 3 cut(s) 305, 1172, 1217
MvnI CGCG 1 cut(s) 1206
MwoI GCNNNNNNNGC 5 cut(s) 224, 233, 960, 1206, 1242
NciI CCSGG 2 cut(s) 371, 1091
NdeII GATC 5 cut(s) 12, 130, 157, 357, 1134
NlaIII CATG 3 cut(s) 104, 504, 1165
NlaIV GGNNCC 1 cut(s) 1237
NmeAIII GCCGAG 2 cut(s) 871, 1109
NmuCI GTSAC 2 cut(s) 661, 1228
PaeR7I CTCGAG 1 cut(s) 620
PaqCI CACCTGC 1 cut(s) 1009
PcsI WCGNNNNNNNCGW 1 cut(s) 939
PctI GAATGC 2 cut(s) 325, 628
PdmI GAANNNNTTC 1 cut(s) 1055
PfeI GAWTC 3 cut(s) 41, 692, 971
PkrI GCNGC 5 cut(s) 627, 789, 1208, 1249, 1302
PleI GAGTC 2 cut(s) 668, 1058
PpsI GAGTC 2 cut(s) 668, 1058
PshBI ATTAAT 1 cut(s) 353
Psp124BI GAGCTC 1 cut(s) 960
Psp6I CCWGG 3 cut(s) 303, 1170, 1215
PspEI GGTNACC 1 cut(s) 365
PspFI CCCAGC 1 cut(s) 668
PspGI CCWGG 3 cut(s) 303, 1170, 1215
PspN4I GGNNCC 1 cut(s) 1237
PspPI GGNCC 4 cut(s) 172, 843, 1199, 1235
PspXI VCTCGAGB 1 cut(s) 620
PstI CTGCAG 2 cut(s) 93, 792
PstNI CAGNNNCTG 1 cut(s) 796
PsuI RGATCY 1 cut(s) 157
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 4 cut(s) 381, 740, 891, 967
RsaNI GTAC 4 cut(s) 380, 739, 890, 966
RseI CAYNNNNRTG 2 cut(s) 945, 1160
SacI GAGCTC 1 cut(s) 960
SaqAI TTAA 4 cut(s) 20, 353, 429, 804
SatI GCNGC 5 cut(s) 626, 788, 1207, 1248, 1301
Sau3AI GATC 5 cut(s) 12, 130, 157, 357, 1134
Sau96I GGNCC 4 cut(s) 172, 843, 1199, 1235
SchI GAGTC 2 cut(s) 669, 1058
ScrFI CCNGG 5 cut(s) 305, 371, 1091, 1172, 1217
SduI GDGCHC 1 cut(s) 960
SfaNI GCATC 2 cut(s) 34, 205
SfcI CTRYAG 2 cut(s) 89, 788
Sfr274I CTCGAG 1 cut(s) 620
SinI GGWCC 1 cut(s) 172
SlaI CTCGAG 1 cut(s) 620
SmiMI CAYNNNNRTG 2 cut(s) 945, 1160
SmlI CTYRAG 1 cut(s) 620
SmoI CTYRAG 1 cut(s) 620
SsiI CCGC 6 cut(s) 290, 785, 1153, 1206, 1300, 1303
SspI AATATT 1 cut(s) 144
SspMI CTAG 1 cut(s) 275
SstI GAGCTC 1 cut(s) 960
StyD4I CCNGG 5 cut(s) 303, 369, 1089, 1170, 1215
StyI CCWWGG 1 cut(s) 361
TaaI ACNGT 3 cut(s) 112, 840, 1284
TaiI ACGT 2 cut(s) 129, 1230
TaqI TCGA 6 cut(s) 129, 621, 870, 1010, 1179, 1211
TatI WGTACW 1 cut(s) 889
TauI GCSGC 2 cut(s) 1209, 1303
TfiI GAWTC 3 cut(s) 41, 692, 971
Tru1I TTAA 4 cut(s) 20, 353, 429, 804
Tru9I TTAA 4 cut(s) 20, 353, 429, 804
TscAI CASTG 3 cut(s) 639, 845, 1237
TseFI GTSAC 2 cut(s) 661, 1228
TseI GCWGC 3 cut(s) 625, 787, 1247
Tsp45I GTSAC 2 cut(s) 661, 1228
TspDTI ATGAA 3 cut(s) 254, 951, 1072
TspGWI ACGGA 1 cut(s) 1279
TspRI CASTG 3 cut(s) 639, 845, 1237
VpaK11BI GGWCC 1 cut(s) 172
VspI ATTAAT 1 cut(s) 353
XapI RAATTY 3 cut(s) 278, 699, 1181
XbaI TCTAGA 1 cut(s) 274
XhoI CTCGAG 1 cut(s) 620
XmiI GTMKAC 2 cut(s) 190, 835
XmnI GAANNNNTTC 1 cut(s) 1055
XspI CTAG 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.