Rorug07G0254700

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
23762665 .. 23767937
5273 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0254700.1

Sequence Viewer

Length: 1251 bp
ATGGAGTTGTTCCCAGCACAGCCAGATTTGTCTCTGCAAATTAGCCCTCCAAACACCAAACCCACATCATCAGGTAGTTGGAGGAGAAGTGCAGAAGAAGAAGAGGCGGCAGAGGTGGATTTGGGGTTCTGGAAAAGAGCCTTCGACTCCAGAAACTCATCCATCTCCTCCGACACCTTCTCCGACCTCTCGCTATCGAATCCAACTCGCCTCTCTCATGATCAGTACTCCAACACCAACAGGATCAACCATTTCCATCACCAAAACCACTTCGGCCTCCAAAATGGCCATAATGGTAACACTAATGGTCTCCTTTTCCATGCCTTTCAGCAAAACCAGTTCCTAAACCCTCAACACCAACTCCATCATCACCAAAGGGTATTCGAGCAACAGCACCAGCAAGAACAACAAGGAGGGTACCTAGGCCCAGAGCTTGGGTTCTTGAGACCCATAAGAGGAATTCCAGTGTACCAAAACCCTCCTCCACCAAATCCTCATCTTCATCACCATCATCCTCCTCCTAATTTGTTCCCATTTTCTGCACAAAATATTAAGCCTAATCTAAATTTGGACACTACCGCTACTTCTCTATCCTCATCCAACAGTACATTAAGCTCACCCTCCAGTAACCCATTTCTCCGGTCTAGGTTCTTGTCCCGTTTTCCTGCCAAACGTAGCATGAGAGCCCCTCGGATGCGGTGGACTACCACTCTACACGCTCGATTCGTTCACGCCGTTGAGCTGTTGGGTGGCCATGAAAGGGCTACACCAAAGTCAGTTCTTGAGCTCATGGATGTGAAAGATCTCACCTTGGCACATGTTAAATCTCATCTGCAGATGTACCGGACGGTGAAAACTACCGATAAAGCAGCGGCAACTTCAGGACAATCTGAACTGTATGAAAATGCATCATCTGGGGATACCACTGAAGATATAATGTTCGACAATATTAATCAGAACCCAACAAGGTCTTCCGAGCAGGGAAGACCAAATCATGCTCAAGATAAGGAGTACTATGGTGGCCTATGGAGCAATTCTTCAAGAGAAGCTTGGTTGCATGGAAATAAACCAAAGGATGATTCTGCTGGAAATATGCCATCTCTTCTTGATGATGAGGACATGATGGATCCCAAAGGCTTAAGAAGCAGCTTTGAGAGAATATCAGATGTAAGCTCCTCAACAAACCATTCAGGGACAAGCCCCATGAAGCCTAATTTGGAATTCACTTTGGGGAGAGGCCACGTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

416

Amino Acids

46.84

Weight (kDa)

6.82

Isoelectric Point (pI)

51.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 231 - 282 3e-06 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 417
AccB1I GGYRCC 1 cut(s) 417
AccB7I CCANNNNNTGG 1 cut(s) 434
AciI CCGC 4 cut(s) 107, 579, 697, 872
AclWI GGATC 3 cut(s) 251, 1121, 1134
AcoI YGGCCR 2 cut(s) 286, 751
AcsI RAATTY 3 cut(s) 459, 565, 1220
AcuI CTGAAG 2 cut(s) 864, 948
AfaI GTAC 6 cut(s) 227, 419, 470, 607, 842, 1013
AfiI CCNNNNNNNGG 3 cut(s) 434, 455, 760
AflII CTTAAG 1 cut(s) 1138
AflIII ACRYGT 1 cut(s) 817
AgsI TTSAA 1 cut(s) 1041
AjuI GAANNNNNNNTTGG 6 cut(s) 955, 987, 1063, 1095, 1199, 1231
AloI GAACNNNNNNTCC 2 cut(s) 110, 142
AluBI AGCT 7 cut(s) 433, 615, 742, 787, 1049, 1149, 1173
AluI AGCT 7 cut(s) 433, 615, 742, 787, 1049, 1149, 1173
Alw21I GWGCWC 1 cut(s) 789
Alw26I GTCTC 3 cut(s) 36, 314, 439
AlwI GGATC 3 cut(s) 251, 1121, 1134
AoxI GGCC 6 cut(s) 274, 286, 424, 751, 1021, 1237
ApeKI GCWGC 2 cut(s) 869, 1146
ApoI RAATTY 3 cut(s) 459, 565, 1220
AseI ATTAAT 1 cut(s) 951
Asp718I GGTACC 1 cut(s) 417
AspA2I CCTAGG 1 cut(s) 421
AspS9I GGNCC 1 cut(s) 425
AsuHPI GGTGA 6 cut(s) 251, 362, 497, 609, 799, 862
AvrII CCTAGG 1 cut(s) 421
BalI TGGCCA 2 cut(s) 288, 753
BamHI GGATCC 1 cut(s) 1126
BanI GGYRCC 1 cut(s) 417
BanII GRGCYC 2 cut(s) 688, 789
BbsI GAAGAC 2 cut(s) 963, 991
Bbv12I GWGCWC 1 cut(s) 789
BbvI GCAGC 2 cut(s) 881, 1158
BccI CCATC 6 cut(s) 170, 264, 372, 516, 1105, 1117
BceAI ACGGC 1 cut(s) 719
BciVI GTATCC 1 cut(s) 913
BclI TGATCA 1 cut(s) 220
BcoDI GTCTC 3 cut(s) 36, 314, 439
BfaI CTAG 2 cut(s) 422, 645
BfmI CTRYAG 1 cut(s) 833
BfrI CTTAAG 1 cut(s) 1138
BfuI GTATCC 1 cut(s) 913
BglII AGATCT 1 cut(s) 802
BisI GCNGC 4 cut(s) 108, 870, 873, 1147
BlnI CCTAGG 1 cut(s) 421
BlsI GCNGC 4 cut(s) 109, 871, 874, 1148
BmcAI AGTACT 2 cut(s) 227, 1013
BmgT120I GGNCC 1 cut(s) 425
BmiI GGNNCC 2 cut(s) 419, 1128
BmsI GCATC 2 cut(s) 684, 917
BpiI GAAGAC 2 cut(s) 963, 991
BplI GAGNNNNNCTC 2 cut(s) 673, 705
BpmI CTGGAG 2 cut(s) 133, 607
BpuEI CTTGAG 3 cut(s) 463, 803, 984
BsaI GGTCTC 2 cut(s) 314, 439
BsaJI CCNNGG 3 cut(s) 421, 689, 810
BsaWI WCCGGW 2 cut(s) 639, 843
BsaXI ACNNNNNCTCC 6 cut(s) 73, 103, 164, 194, 345, 375
Bsc4I CCNNNNNNNGG 3 cut(s) 434, 455, 760
Bse1I ACTGG 3 cut(s) 337, 464, 624
BseDI CCNNGG 3 cut(s) 421, 689, 810
BseGI GGATG 6 cut(s) 158, 511, 596, 699, 799, 1081
BseLI CCNNNNNNNGG 3 cut(s) 434, 455, 760
BseNI ACTGG 3 cut(s) 337, 464, 624
BseRI GAGGAG 5 cut(s) 97, 157, 471, 507, 1165
BseXI GCAGC 2 cut(s) 881, 1158
BseYI CCCAGC 1 cut(s) 13
BsgI GTGCAG 2 cut(s) 111, 525
BshFI GGCC 6 cut(s) 276, 288, 426, 753, 1023, 1239
BshNI GGYRCC 1 cut(s) 417
BsiHKAI GWGCWC 1 cut(s) 789
BsiSI CCGG 2 cut(s) 640, 844
BslFI GGGAC 2 cut(s) 640, 1207
BslI CCNNNNNNNGG 3 cut(s) 434, 455, 760
BsmAI GTCTC 3 cut(s) 36, 314, 439
BsmFI GGGAC 2 cut(s) 640, 1207
BsnI GGCC 6 cut(s) 276, 288, 426, 753, 1023, 1239
Bso31I GGTCTC 2 cut(s) 314, 439
Bsp1286I GDGCHC 2 cut(s) 688, 789
Bsp143I GATC 4 cut(s) 220, 243, 802, 1126
BspACI CCGC 4 cut(s) 107, 579, 697, 872
BspANI GGCC 6 cut(s) 276, 288, 426, 753, 1023, 1239
BspHI TCATGA 1 cut(s) 217
BspLI GGNNCC 2 cut(s) 419, 1128
BspMAI CTGCAG 1 cut(s) 837
BspPI GGATC 3 cut(s) 251, 1121, 1134
BspT107I GGYRCC 1 cut(s) 417
BspTI CTTAAG 1 cut(s) 1138
BspTNI GGTCTC 2 cut(s) 314, 439
BsrI ACTGG 3 cut(s) 337, 464, 624
BssECI CCNNGG 3 cut(s) 421, 689, 810
BssMI GATC 4 cut(s) 220, 243, 802, 1126
BssT1I CCWWGG 2 cut(s) 421, 810
Bst4CI ACNGT 3 cut(s) 605, 850, 897
Bst6I CTCTTC 2 cut(s) 96, 1107
BstAFI CTTAAG 1 cut(s) 1138
BstF5I GGATG 6 cut(s) 158, 511, 596, 699, 799, 1081
BstKTI GATC 4 cut(s) 223, 246, 805, 1129
BstMAI GTCTC 3 cut(s) 36, 314, 439
BstMBI GATC 4 cut(s) 220, 243, 802, 1126
BstMWI GCNNNNNNNGC 2 cut(s) 1029, 1143
BstNSI RCATGY 1 cut(s) 821
BstSFI CTRYAG 1 cut(s) 833
BstV1I GCAGC 2 cut(s) 881, 1158
BstV2I GAAGAC 2 cut(s) 963, 991
BstX2I RGATCY 2 cut(s) 802, 1126
BstYI RGATCY 2 cut(s) 802, 1126
BsuI GTATCC 1 cut(s) 913
BsuRI GGCC 6 cut(s) 276, 288, 426, 753, 1023, 1239
BtsCI GGATG 6 cut(s) 158, 511, 596, 699, 799, 1081
BtsIMutI CAGTG 2 cut(s) 471, 924
CciI TCATGA 1 cut(s) 217
Cfr13I GGNCC 1 cut(s) 425
Csp6I GTAC 6 cut(s) 226, 418, 469, 606, 841, 1012
CviQI GTAC 6 cut(s) 226, 418, 469, 606, 841, 1012
DpnI GATC 4 cut(s) 222, 245, 804, 1128
DpnII GATC 4 cut(s) 220, 243, 802, 1126
EaeI YGGCCR 2 cut(s) 286, 751
Eam1104I CTCTTC 2 cut(s) 96, 1107
EarI CTCTTC 2 cut(s) 96, 1107
Ecl136II GAGCTC 1 cut(s) 787
Eco130I CCWWGG 2 cut(s) 421, 810
Eco24I GRGCYC 2 cut(s) 688, 789
Eco31I GGTCTC 2 cut(s) 314, 439
Eco53kI GAGCTC 1 cut(s) 787
Eco57I CTGAAG 2 cut(s) 864, 948
EcoICRI GAGCTC 1 cut(s) 787
EcoRI GAATTC 2 cut(s) 459, 1220
EcoT14I CCWWGG 2 cut(s) 421, 810
EcoT22I ATGCAT 1 cut(s) 910
EcoT38I GRGCYC 2 cut(s) 688, 789
ErhI CCWWGG 2 cut(s) 421, 810
FalI AAGNNNNNCTT 2 cut(s) 1033, 1065
FaqI GGGAC 2 cut(s) 640, 1207
FbaI TGATCA 1 cut(s) 220
Fnu4HI GCNGC 4 cut(s) 108, 870, 873, 1147
FokI GGATG 6 cut(s) 145, 498, 583, 706, 806, 1088
FriOI GRGCYC 2 cut(s) 688, 789
Fsp4HI GCNGC 4 cut(s) 108, 870, 873, 1147
FspBI CTAG 2 cut(s) 422, 645
GluI GCNGC 4 cut(s) 108, 870, 873, 1147
GsaI CCCAGC 1 cut(s) 17
GsuI CTGGAG 2 cut(s) 133, 607
HaeIII GGCC 6 cut(s) 276, 288, 426, 753, 1023, 1239
HapII CCGG 2 cut(s) 640, 844
HindIII AAGCTT 1 cut(s) 1047
HinfI GANTC 4 cut(s) 146, 199, 723, 1079
HpaII CCGG 2 cut(s) 640, 844
HphI GGTGA 6 cut(s) 251, 362, 497, 609, 799, 862
Hpy166II GTNNAC 3 cut(s) 469, 702, 730
Hpy188I TCNGA 7 cut(s) 172, 184, 693, 892, 957, 976, 1165
Hpy188III TCNNGA 9 cut(s) 130, 150, 218, 442, 782, 882, 1001, 1041, 1106
Hpy8I GTNNAC 3 cut(s) 469, 702, 730
HpyAV CCTTC 2 cut(s) 151, 187
HpyCH4III ACNGT 3 cut(s) 605, 850, 897
HpyCH4IV ACGT 2 cut(s) 673, 1242
HpyCH4V TGCA 6 cut(s) 37, 92, 542, 835, 908, 1057
HpyF10VI GCNNNNNNNGC 2 cut(s) 1029, 1143
HpySE526I ACGT 2 cut(s) 673, 1242
KpnI GGTACC 1 cut(s) 421
Ksp22I TGATCA 1 cut(s) 220
Kzo9I GATC 4 cut(s) 220, 243, 802, 1126
LmnI GCTCC 2 cut(s) 1029, 1178
Lsp1109I GCAGC 2 cut(s) 881, 1158
LweI GCATC 2 cut(s) 684, 917
MaeI CTAG 2 cut(s) 422, 645
MaeII ACGT 2 cut(s) 673, 1242
MaeIII GTNAC 2 cut(s) 296, 626
MalI GATC 4 cut(s) 222, 245, 804, 1128
MboI GATC 4 cut(s) 220, 243, 802, 1126
MboII GAAGA 9 cut(s) 107, 110, 113, 491, 941, 963, 996, 1029, 1094
MflI RGATCY 2 cut(s) 802, 1126
MhlI GDGCHC 2 cut(s) 688, 789
MlsI TGGCCA 2 cut(s) 288, 753
MluCI AATT 8 cut(s) 39, 459, 523, 565, 1033, 1213, 1220, 1246
MluNI TGGCCA 2 cut(s) 288, 753
MlyI GAGTC 1 cut(s) 140
MmeI TCCRAC 6 cut(s) 59, 195, 207, 227, 255, 624
Mox20I TGGCCA 2 cut(s) 288, 753
Mph1103I ATGCAT 1 cut(s) 910
MscI TGGCCA 2 cut(s) 288, 753
MseI TTAA 7 cut(s) 552, 611, 822, 951, 1139, 1245, 1249
MslI CAYNNNNRTG 1 cut(s) 794
Msp20I TGGCCA 2 cut(s) 288, 753
MspA1I CMGCKG 1 cut(s) 872
MspCI CTTAAG 1 cut(s) 1138
MspI CCGG 2 cut(s) 640, 844
MwoI GCNNNNNNNGC 2 cut(s) 1029, 1143
NdeII GATC 4 cut(s) 220, 243, 802, 1126
NlaIV GGNNCC 2 cut(s) 419, 1128
NsiI ATGCAT 1 cut(s) 910
NspI RCATGY 1 cut(s) 821
PacI TTAATTAA 1 cut(s) 1249
PagI TCATGA 1 cut(s) 217
PciI ACATGT 1 cut(s) 817
PcsI WCGNNNNNNNCGW 2 cut(s) 723, 732
PfeI GAWTC 3 cut(s) 199, 723, 1079
PflMI CCANNNNNTGG 1 cut(s) 434
PkrI GCNGC 4 cut(s) 109, 871, 874, 1148
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
PscI ACATGT 1 cut(s) 817
PshBI ATTAAT 1 cut(s) 951
Psp124BI GAGCTC 1 cut(s) 789
PspFI CCCAGC 1 cut(s) 13
PspN4I GGNNCC 2 cut(s) 419, 1128
PspPI GGNCC 1 cut(s) 425
PstI CTGCAG 1 cut(s) 837
PsuI RGATCY 2 cut(s) 802, 1126
RsaI GTAC 6 cut(s) 227, 419, 470, 607, 842, 1013
RsaNI GTAC 6 cut(s) 226, 418, 469, 606, 841, 1012
RseI CAYNNNNRTG 1 cut(s) 794
SacI GAGCTC 1 cut(s) 789
SaqAI TTAA 7 cut(s) 552, 611, 822, 951, 1139, 1245, 1249
SatI GCNGC 4 cut(s) 108, 870, 873, 1147
Sau3AI GATC 4 cut(s) 220, 243, 802, 1126
Sau96I GGNCC 1 cut(s) 425
ScaI AGTACT 2 cut(s) 227, 1013
SchI GAGTC 1 cut(s) 140
SduI GDGCHC 2 cut(s) 688, 789
SfaNI GCATC 2 cut(s) 684, 917
SfcI CTRYAG 1 cut(s) 833
SmiMI CAYNNNNRTG 1 cut(s) 794
SmlI CTYRAG 4 cut(s) 442, 782, 999, 1138
SmoI CTYRAG 4 cut(s) 442, 782, 999, 1138
Sse9I AATT 8 cut(s) 39, 459, 523, 565, 1033, 1213, 1220, 1246
SsiI CCGC 4 cut(s) 107, 579, 697, 872
SspI AATATT 2 cut(s) 550, 949
SspMI CTAG 2 cut(s) 422, 645
SstI GAGCTC 1 cut(s) 789
StyI CCWWGG 2 cut(s) 421, 810
TaaI ACNGT 3 cut(s) 605, 850, 897
TaiI ACGT 2 cut(s) 676, 1245
TaqI TCGA 5 cut(s) 144, 197, 384, 721, 942
TasI AATT 8 cut(s) 39, 459, 523, 565, 1033, 1213, 1220, 1246
TatI WGTACW 3 cut(s) 225, 605, 1011
TauI GCSGC 2 cut(s) 110, 875
TfiI GAWTC 3 cut(s) 199, 723, 1079
Tru1I TTAA 7 cut(s) 552, 611, 822, 951, 1139, 1245, 1249
Tru9I TTAA 7 cut(s) 552, 611, 822, 951, 1139, 1245, 1249
TscAI CASTG 2 cut(s) 471, 931
TseI GCWGC 2 cut(s) 869, 1146
TspDTI ATGAA 4 cut(s) 491, 771, 915, 1220
TspRI CASTG 2 cut(s) 471, 931
Van91I CCANNNNNTGG 1 cut(s) 434
Vha464I CTTAAG 1 cut(s) 1138
VspI ATTAAT 1 cut(s) 951
XapI RAATTY 3 cut(s) 459, 565, 1220
XceI RCATGY 1 cut(s) 821
XmaJI CCTAGG 1 cut(s) 421
XspI CTAG 2 cut(s) 422, 645
ZrmI AGTACT 2 cut(s) 227, 1013
Zsp2I ATGCAT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.