Rorug07G0268400

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
25326434 .. 25332626
6193 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0268400.1

Sequence Viewer

Length: 1566 bp
ATGGAAGGAAGGGGGCTTTCAGACTTCTATAGGAATACTAGTGAAGAGTTGATCCTGAGATCTTATATGGAGAGCTCAAATGGAACTCCTCTACCAACCATGGAGATGCTTGGCTTCAAGAATTTGTCACAAAATTTTCGTGCAGATAGCGAGGAGCTCTTCAAAAGCTGGCTCACAACTGGAGAGAACAATACCTACAATTCCTCAAGCATTGCACATCGAACTCGGTCAAGGAGGATATCCACCGAAATAGCTAGTTTGTCTGCTCACCAACATGTTGGTCTACTTCAAAAGAAAAGAAGCAATGAAGTTTTATTTCCTCAATATAACCCCATGCCTGATGAGAACTCAGCTGACCTCAATCAACATTCAAACAGACTTGGTGTTGAAAGAGGAATGCAAGCTAGTGACTTATATTTGGCTAAGGCCTGGTTTCACAGTTCCCAACCCATGACAAGAAGCCGGTCCTCTGAATTGCGGAAGAGATATGTTGCCATGCAAAATTCTCAACCAGCAATAGGTCTGGATGGCCTTCAAAATGCTTCAGGGAATTATAACAATGTAGTAAAAGAAGAATTTGCATTTTCAAATGGCTTTAATGTTCCCTCAATATGTGAGGTTTCTAACCAGTTGGGGACCTTCATTTCTCCATCCAATTCATCCTCATCCAATTTCGACGCTCCTCAAATGGGTGACATGGATAAAGTATCATCTGTTGTGAGCATGCTAAAGGGTACATTAGAGCGCAAAAAGCTTAGCAACCAGATTGAAAAAGGTGCAGAGGATGATAGCTCCACTAGGCTTTTCCCTGGTCAAGAAGTTATAGTCAATACTGGTTTTGATCAAGAGCAAGGTAATCAGCTTCAAGATATGGTGAGAACTTTTCAGGAAGTATCCACTATAGAAGTTAAGGATCATGCGGGTATGCAAAAAGCTGAAGGATCCCTGGATCTTGAGATGGAAGGTTTTGTAAATCTCACAAACCCTAACCCATTGAGCAGGAATTCTCAAGAACCTTCACAAAGTGAATCATCTGCTGCAGCACCAGTAGTTTCATCTGGGTTTGATGCATGTGATGGTCCCAGCAACTCAAGTCAAACTCTGAGCATATGTGAAAGTTCACTGAAACGAGCTGGAAATAGGAGTTCAGAAAATGGCTCTAGATCGAAAGATATCAGAGAACGTATTATTGGTAATTTGAAAGATGATCAAAAGAGGGGAGAACGTTTAGAGCGATATGGATCTGTGACATCAGCCACTTCAGGAGATAAGGAGGATGCCACAAAAAAGCGGAGGGTGGAGAGATCACGCAAAATGGCAGAGGCAAAGGAAAGGAATTCAACTCCAGTAATTCCATCAGATATACAATCTGTCTTAAAGCGGTGTGAAAATCTTGAAAAGGAAGTCCGGTCCCTCAAACTTAACTTGTCCTTCATGAATAGGAAGGATTCCGAGCAGACAAAGCAGATAGAGGAGCTTCAGCAGCAAAACGAAGAATTAACAGATGAAAAAGAGCGCCTTTTAGAAGAGATTGAAAGGATCCTTGCAGAAAATGGCAAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

521

Amino Acids

58.29

Weight (kDa)

5.54

Isoelectric Point (pI)

58.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 555
AccI GTMKAC 1 cut(s) 283
AciI CCGC 4 cut(s) 478, 920, 1291, 1381
AclI AACGTT 1 cut(s) 1225
AclWI GGATC 8 cut(s) 46, 921, 936, 949, 957, 1249, 1534, 1547
AcsI RAATTY 6 cut(s) 121, 133, 502, 575, 1003, 1336
AcuI CTGAAG 4 cut(s) 528, 957, 1245, 1463
AdeI CACNNNGTG 1 cut(s) 1025
AfaI GTAC 1 cut(s) 736
AfiI CCNNNNNNNGG 2 cut(s) 518, 689
AflIII ACRYGT 1 cut(s) 274
AhlI ACTAGT 1 cut(s) 38
AjnI CCWGG 3 cut(s) 428, 808, 945
AjuI GAANNNNNNNTTGG 2 cut(s) 1173, 1205
Alw21I GWGCWC 2 cut(s) 77, 159
AlwI GGATC 8 cut(s) 46, 921, 936, 949, 957, 1249, 1534, 1547
AoxI GGCC 2 cut(s) 426, 529
ApeKI GCWGC 3 cut(s) 1037, 1040, 1483
ApoI RAATTY 6 cut(s) 121, 133, 502, 575, 1003, 1336
AspLEI GCGC 2 cut(s) 747, 1518
AspS9I GGNCC 4 cut(s) 465, 636, 1079, 1410
AsuHPI GGTGA 3 cut(s) 260, 704, 886
AvaII GGWCC 4 cut(s) 465, 636, 1079, 1410
BamHI GGATCC 2 cut(s) 941, 1539
BanII GRGCYC 2 cut(s) 77, 159
Bbv12I GWGCWC 2 cut(s) 77, 159
BbvI GCAGC 3 cut(s) 1024, 1052, 1495
BccI CCATC 5 cut(s) 521, 658, 952, 1070, 1363
BciT130I CCWGG 3 cut(s) 430, 810, 947
BciVI GTATCC 1 cut(s) 904
BclI TGATCA 2 cut(s) 841, 1207
BcuI ACTAGT 1 cut(s) 38
BfaI CTAG 5 cut(s) 39, 255, 405, 798, 1161
BfmI CTRYAG 3 cut(s) 28, 900, 1038
BfoI RGCGCY 1 cut(s) 1519
BfuI GTATCC 1 cut(s) 904
BglII AGATCT 1 cut(s) 59
BisI GCNGC 3 cut(s) 1038, 1041, 1484
BlpI GCTNAGC 1 cut(s) 755
BlsI GCNGC 3 cut(s) 1039, 1042, 1485
Bme1390I CCNGG 3 cut(s) 430, 810, 947
Bme18I GGWCC 4 cut(s) 465, 636, 1079, 1410
BmgT120I GGNCC 4 cut(s) 465, 636, 1079, 1410
BmiI GGNNCC 5 cut(s) 637, 943, 1081, 1412, 1541
BmrFI CCNGG 3 cut(s) 430, 810, 947
BmsI GCATC 3 cut(s) 96, 1057, 1267
BpmI CTGGAG 2 cut(s) 201, 1329
Bpu10I CCTNAGC 1 cut(s) 423
Bpu1102I GCTNAGC 1 cut(s) 755
BpuEI CTTGAG 4 cut(s) 190, 974, 993, 1075
BsaBI GATNNNNATC 1 cut(s) 1240
BsaJI CCNNGG 3 cut(s) 99, 808, 945
BsaWI WCCGGW 1 cut(s) 1407
Bsc4I CCNNNNNNNGG 2 cut(s) 518, 689
Bse118I RCCGGY 1 cut(s) 462
Bse1I ACTGG 5 cut(s) 184, 628, 838, 1046, 1346
Bse3DI GCAATG 2 cut(s) 210, 310
Bse8I GATNNNNATC 1 cut(s) 1240
BseBI CCWGG 3 cut(s) 430, 810, 947
BseDI CCNNGG 3 cut(s) 99, 808, 945
BseGI GGATG 6 cut(s) 532, 650, 659, 665, 790, 1282
BseJI GATNNNNATC 1 cut(s) 1240
BseLI CCNNNNNNNGG 2 cut(s) 518, 689
BseMI GCAATG 2 cut(s) 210, 310
BseMII CTCAG 3 cut(s) 47, 363, 1094
BseNI ACTGG 5 cut(s) 184, 628, 838, 1046, 1346
BseRI GAGGAG 4 cut(s) 78, 167, 672, 1487
BseXI GCAGC 3 cut(s) 1024, 1052, 1495
BseYI CCCAGC 1 cut(s) 1082
BsgI GTGCAG 2 cut(s) 162, 798
BshFI GGCC 2 cut(s) 428, 531
BsiHKAI GWGCWC 2 cut(s) 77, 159
BsiSI CCGG 2 cut(s) 463, 1408
BslFI GGGAC 3 cut(s) 649, 1065, 1396
BslI CCNNNNNNNGG 2 cut(s) 518, 689
BsmFI GGGAC 3 cut(s) 649, 1065, 1396
BsmI GAATGC 1 cut(s) 402
BsnI GGCC 2 cut(s) 428, 531
Bsp1286I GDGCHC 2 cut(s) 77, 159
Bsp1720I GCTNAGC 1 cut(s) 755
Bsp19I CCATGG 1 cut(s) 99
BspACI CCGC 4 cut(s) 478, 920, 1291, 1381
BspANI GGCC 2 cut(s) 428, 531
BspCNI CTCAG 3 cut(s) 48, 362, 1095
BspHI TCATGA 1 cut(s) 1434
BspLI GGNNCC 5 cut(s) 637, 943, 1081, 1412, 1541
BspMAI CTGCAG 1 cut(s) 1042
BspPI GGATC 8 cut(s) 46, 921, 936, 949, 957, 1249, 1534, 1547
BspQI GCTCTTC 1 cut(s) 164
BsrDI GCAATG 2 cut(s) 210, 310
BsrFI RCCGGY 1 cut(s) 462
BsrI ACTGG 5 cut(s) 184, 628, 838, 1046, 1346
BssAI RCCGGY 1 cut(s) 462
BssECI CCNNGG 3 cut(s) 99, 808, 945
BssT1I CCWWGG 1 cut(s) 99
Bst2UI CCWGG 3 cut(s) 430, 810, 947
Bst4CI ACNGT 1 cut(s) 440
Bst6I CTCTTC 4 cut(s) 39, 164, 476, 1521
BstC8I GCNNGC 3 cut(s) 170, 402, 725
BstDEI CTNAG 5 cut(s) 56, 349, 423, 755, 1103
BstDSI CCRYGG 1 cut(s) 99
BstF5I GGATG 6 cut(s) 532, 650, 659, 665, 790, 1282
BstH2I RGCGCY 1 cut(s) 1519
BstHHI GCGC 2 cut(s) 747, 1518
BstMWI GCNNNNNNNGC 3 cut(s) 751, 1462, 1483
BstNI CCWGG 3 cut(s) 430, 810, 947
BstNSI RCATGY 3 cut(s) 278, 727, 1074
BstSCI CCNGG 3 cut(s) 428, 808, 945
BstSFI CTRYAG 3 cut(s) 28, 900, 1038
BstV1I GCAGC 3 cut(s) 1024, 1052, 1495
BstX2I RGATCY 5 cut(s) 59, 941, 949, 1241, 1539
BstXI CCANNNNNNTGG 1 cut(s) 278
BstYI RGATCY 5 cut(s) 59, 941, 949, 1241, 1539
BsuI GTATCC 1 cut(s) 904
BsuRI GGCC 2 cut(s) 428, 531
BtgI CCRYGG 1 cut(s) 99
BtsCI GGATG 6 cut(s) 532, 650, 659, 665, 790, 1282
BtsIMutI CAGTG 1 cut(s) 1121
Cac8I GCNNGC 3 cut(s) 170, 402, 725
CciI TCATGA 1 cut(s) 1434
CfoI GCGC 2 cut(s) 747, 1518
Cfr10I RCCGGY 1 cut(s) 462
Cfr13I GGNCC 4 cut(s) 465, 636, 1079, 1410
CseI GACGC 1 cut(s) 686
Csp6I GTAC 1 cut(s) 735
CviQI GTAC 1 cut(s) 735
DdeI CTNAG 5 cut(s) 56, 349, 423, 755, 1103
DraIII CACNNNGTG 1 cut(s) 1025
Eam1104I CTCTTC 4 cut(s) 39, 164, 476, 1521
EarI CTCTTC 4 cut(s) 39, 164, 476, 1521
Ecl136II GAGCTC 2 cut(s) 75, 157
Eco130I CCWWGG 1 cut(s) 99
Eco147I AGGCCT 1 cut(s) 428
Eco24I GRGCYC 2 cut(s) 77, 159
Eco32I GATATC 2 cut(s) 240, 1174
Eco47I GGWCC 4 cut(s) 465, 636, 1079, 1410
Eco53kI GAGCTC 2 cut(s) 75, 157
Eco57I CTGAAG 4 cut(s) 528, 957, 1245, 1463
EcoICRI GAGCTC 2 cut(s) 75, 157
EcoO109I RGGNCCY 1 cut(s) 636
EcoRI GAATTC 2 cut(s) 1003, 1336
EcoRII CCWGG 3 cut(s) 428, 808, 945
EcoRV GATATC 2 cut(s) 240, 1174
EcoT14I CCWWGG 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 1072
EcoT38I GRGCYC 2 cut(s) 77, 159
ErhI CCWWGG 1 cut(s) 99
FalI AAGNNNNNCTT 2 cut(s) 1503, 1535
FaqI GGGAC 3 cut(s) 649, 1065, 1396
FauI CCCGC 1 cut(s) 913
FauNDI CATATG 1 cut(s) 1109
FbaI TGATCA 2 cut(s) 841, 1207
FblI GTMKAC 1 cut(s) 283
Fnu4HI GCNGC 3 cut(s) 1038, 1041, 1484
FokI GGATG 6 cut(s) 539, 637, 646, 652, 797, 1289
FriOI GRGCYC 2 cut(s) 77, 159
Fsp4HI GCNGC 3 cut(s) 1038, 1041, 1484
FspBI CTAG 5 cut(s) 39, 255, 405, 798, 1161
GlaI GCGC 2 cut(s) 746, 1517
GluI GCNGC 3 cut(s) 1038, 1041, 1484
GsaI CCCAGC 1 cut(s) 1086
GsuI CTGGAG 2 cut(s) 201, 1329
HaeII RGCGCY 1 cut(s) 1519
HaeIII GGCC 2 cut(s) 428, 531
HapII CCGG 2 cut(s) 463, 1408
HgaI GACGC 1 cut(s) 686
HhaI GCGC 2 cut(s) 747, 1518
Hin6I GCGC 2 cut(s) 745, 1516
HinP1I GCGC 2 cut(s) 745, 1516
HindIII AAGCTT 1 cut(s) 752
HinfI GANTC 2 cut(s) 1028, 1448
HpaII CCGG 2 cut(s) 463, 1408
HphI GGTGA 3 cut(s) 260, 704, 886
Hpy166II GTNNAC 2 cut(s) 284, 1121
Hpy188I TCNGA 7 cut(s) 22, 472, 1104, 1150, 1178, 1360, 1453
Hpy8I GTNNAC 2 cut(s) 284, 1121
Hpy99I CGWCG 1 cut(s) 680
HpyAV CCTTC 8 cut(s) 3, 542, 649, 932, 956, 1026, 1438, 1441
HpyCH4III ACNGT 1 cut(s) 440
HpyCH4IV ACGT 2 cut(s) 1183, 1225
HpyF10VI GCNNNNNNNGC 3 cut(s) 751, 1462, 1483
HpyF3I CTNAG 5 cut(s) 56, 349, 423, 755, 1103
HpySE526I ACGT 2 cut(s) 1183, 1225
HspAI GCGC 2 cut(s) 745, 1516
Ksp22I TGATCA 2 cut(s) 841, 1207
LguI GCTCTTC 1 cut(s) 164
LmnI GCTCC 4 cut(s) 154, 685, 797, 1474
Lsp1109I GCAGC 3 cut(s) 1024, 1052, 1495
LweI GCATC 3 cut(s) 96, 1057, 1267
MaeI CTAG 5 cut(s) 39, 255, 405, 798, 1161
MaeII ACGT 2 cut(s) 1183, 1225
MaeIII GTNAC 4 cut(s) 126, 407, 692, 1246
MboII GAAGA 6 cut(s) 56, 151, 493, 584, 1505, 1538
MflI RGATCY 5 cut(s) 59, 941, 949, 1241, 1539
MhlI GDGCHC 2 cut(s) 77, 159
Mph1103I ATGCAT 1 cut(s) 1072
MseI TTAA 5 cut(s) 597, 909, 1376, 1422, 1499
MslI CAYNNNNRTG 2 cut(s) 104, 273
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 2 cut(s) 463, 1408
MspR9I CCNGG 3 cut(s) 430, 810, 947
Mva1269I GAATGC 1 cut(s) 402
MvaI CCWGG 3 cut(s) 430, 810, 947
MwoI GCNNNNNNNGC 3 cut(s) 751, 1462, 1483
NcoI CCATGG 1 cut(s) 99
NdeI CATATG 1 cut(s) 1109
NlaIV GGNNCC 5 cut(s) 637, 943, 1081, 1412, 1541
NmuCI GTSAC 4 cut(s) 126, 407, 692, 1246
NsiI ATGCAT 1 cut(s) 1072
NspI RCATGY 3 cut(s) 278, 727, 1074
PaeI GCATGC 1 cut(s) 727
PagI TCATGA 1 cut(s) 1434
PceI AGGCCT 1 cut(s) 428
PciI ACATGT 1 cut(s) 274
PciSI GCTCTTC 1 cut(s) 164
PcsI WCGNNNNNNNCGW 1 cut(s) 1231
PctI GAATGC 1 cut(s) 402
PfeI GAWTC 2 cut(s) 1028, 1448
PkrI GCNGC 3 cut(s) 1039, 1042, 1485
PpuMI RGGWCCY 1 cut(s) 636
PscI ACATGT 1 cut(s) 274
PsiI TTATAA 1 cut(s) 555
Psp124BI GAGCTC 2 cut(s) 77, 159
Psp1406I AACGTT 1 cut(s) 1225
Psp5II RGGWCCY 1 cut(s) 636
Psp6I CCWGG 3 cut(s) 428, 808, 945
PspFI CCCAGC 1 cut(s) 1082
PspGI CCWGG 3 cut(s) 428, 808, 945
PspN4I GGNNCC 5 cut(s) 637, 943, 1081, 1412, 1541
PspPI GGNCC 4 cut(s) 465, 636, 1079, 1410
PspPPI RGGWCCY 1 cut(s) 636
PsrI GAACNNNNNNTAC 2 cut(s) 179, 211
PstI CTGCAG 1 cut(s) 1042
PsuI RGATCY 5 cut(s) 59, 941, 949, 1241, 1539
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 1 cut(s) 736
RsaNI GTAC 1 cut(s) 735
RseI CAYNNNNRTG 2 cut(s) 104, 273
SacI GAGCTC 2 cut(s) 77, 159
SapI GCTCTTC 1 cut(s) 164
SaqAI TTAA 5 cut(s) 597, 909, 1376, 1422, 1499
SatI GCNGC 3 cut(s) 1038, 1041, 1484
Sau96I GGNCC 4 cut(s) 465, 636, 1079, 1410
ScrFI CCNGG 3 cut(s) 430, 810, 947
SduI GDGCHC 2 cut(s) 77, 159
SfaNI GCATC 3 cut(s) 96, 1057, 1267
SfcI CTRYAG 3 cut(s) 28, 900, 1038
SinI GGWCC 4 cut(s) 465, 636, 1079, 1410
SmiMI CAYNNNNRTG 2 cut(s) 104, 273
SmlI CTYRAG 4 cut(s) 205, 953, 1008, 1090
SmoI CTYRAG 4 cut(s) 205, 953, 1008, 1090
SpeI ACTAGT 1 cut(s) 38
SphI GCATGC 1 cut(s) 727
SseBI AGGCCT 1 cut(s) 428
SsiI CCGC 4 cut(s) 478, 920, 1291, 1381
SspMI CTAG 5 cut(s) 39, 255, 405, 798, 1161
SstI GAGCTC 2 cut(s) 77, 159
StuI AGGCCT 1 cut(s) 428
StyD4I CCNGG 3 cut(s) 428, 808, 945
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 1 cut(s) 440
TaiI ACGT 2 cut(s) 1186, 1228
TaqI TCGA 3 cut(s) 220, 675, 1166
TaqII GACCGA 1 cut(s) 216
TfiI GAWTC 2 cut(s) 1028, 1448
Tru1I TTAA 5 cut(s) 597, 909, 1376, 1422, 1499
Tru9I TTAA 5 cut(s) 597, 909, 1376, 1422, 1499
TscAI CASTG 1 cut(s) 1128
TseFI GTSAC 4 cut(s) 126, 407, 692, 1246
TseI GCWGC 3 cut(s) 1037, 1040, 1483
Tsp45I GTSAC 4 cut(s) 126, 407, 692, 1246
TspDTI ATGAA 7 cut(s) 321, 631, 648, 1044, 1423, 1451, 1521
TspRI CASTG 1 cut(s) 1128
VpaK11BI GGWCC 4 cut(s) 465, 636, 1079, 1410
XapI RAATTY 6 cut(s) 121, 133, 502, 575, 1003, 1336
XbaI TCTAGA 1 cut(s) 1160
XceI RCATGY 3 cut(s) 278, 727, 1074
XmiI GTMKAC 1 cut(s) 283
XspI CTAG 5 cut(s) 39, 255, 405, 798, 1161
Zsp2I ATGCAT 1 cut(s) 1072
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.