Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 308, 1894 |
| AciI | CCGC | 5 cut(s) | 126, 726, 823, 1592, 2339 |
| AclWI | GGATC | 3 cut(s) | 151, 898, 2200 |
| AcoI | YGGCCR | 1 cut(s) | 1211 |
| AcsI | RAATTY | 1 cut(s) | 1359 |
| AcuI | CTGAAG | 3 cut(s) | 935, 1056, 1343 |
| AdeI | CACNNNGTG | 1 cut(s) | 287 |
| AfaI | GTAC | 9 cut(s) | 401, 488, 1071, 1194, 1664, 1694, 2087, 2279, 2399 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 113, 238, 761, 1344, 1422, 1755, 1778, 1824, 2272 |
| AhlI | ACTAGT | 2 cut(s) | 391, 833 |
| AjnI | CCWGG | 3 cut(s) | 1771, 2040, 2266 |
| Alw21I | GWGCWC | 3 cut(s) | 1430, 1578, 2286 |
| Alw26I | GTCTC | 1 cut(s) | 608 |
| AlwI | GGATC | 3 cut(s) | 151, 898, 2200 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1034 |
| AoxI | GGCC | 3 cut(s) | 736, 1211, 1354 |
| ApeKI | GCWGC | 5 cut(s) | 1139, 1238, 1624, 2228, 2432 |
| ApoI | RAATTY | 1 cut(s) | 1359 |
| AspS9I | GGNCC | 1 cut(s) | 1354 |
| AsuC2I | CCSGG | 2 cut(s) | 756, 1892 |
| AsuHPI | GGTGA | 5 cut(s) | 311, 361, 758, 1507, 2000 |
| AxyI | CCTNAGG | 2 cut(s) | 935, 1908 |
| BaeGI | GKGCMC | 2 cut(s) | 260, 311 |
| BalI | TGGCCA | 1 cut(s) | 1213 |
| BanI | GGYRCC | 2 cut(s) | 308, 1894 |
| BanII | GRGCYC | 2 cut(s) | 1578, 2286 |
| BauI | CACGAG | 1 cut(s) | 800 |
| BbsI | GAAGAC | 2 cut(s) | 1939, 2268 |
| Bbv12I | GWGCWC | 3 cut(s) | 1430, 1578, 2286 |
| BbvCI | CCTCAGC | 1 cut(s) | 1461 |
| BbvI | GCAGC | 5 cut(s) | 1126, 1250, 1611, 2240, 2419 |
| BccI | CCATC | 9 cut(s) | 71, 125, 661, 686, 1345, 1384, 1424, 1822, 2135 |
| BceAI | ACGGC | 1 cut(s) | 2221 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1920, 1954 |
| BciT130I | CCWGG | 3 cut(s) | 1773, 2042, 2268 |
| BcnI | CCSGG | 2 cut(s) | 756, 1892 |
| BcoDI | GTCTC | 1 cut(s) | 608 |
| BcuI | ACTAGT | 2 cut(s) | 391, 833 |
| BfaI | CTAG | 5 cut(s) | 392, 834, 1488, 1865, 2241 |
| BfmI | CTRYAG | 1 cut(s) | 740 |
| BglII | AGATCT | 1 cut(s) | 2071 |
| BisI | GCNGC | 5 cut(s) | 1140, 1239, 1625, 2229, 2433 |
| BlsI | GCNGC | 5 cut(s) | 1141, 1240, 1626, 2230, 2434 |
| BmcAI | AGTACT | 1 cut(s) | 2087 |
| Bme1390I | CCNGG | 5 cut(s) | 756, 1773, 1892, 2042, 2268 |
| BmgT120I | GGNCC | 1 cut(s) | 1354 |
| BmiI | GGNNCC | 5 cut(s) | 310, 1747, 1896, 1905, 2129 |
| BmrFI | CCNGG | 5 cut(s) | 756, 1773, 1892, 2042, 2268 |
| BmsI | GCATC | 4 cut(s) | 1298, 1818, 1887, 2160 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2268 |
| BpiI | GAAGAC | 2 cut(s) | 1939, 2268 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1730, 1762, 2050, 2082 |
| BpmI | CTGGAG | 3 cut(s) | 567, 2063, 2294 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1461 |
| BpuEI | CTTGAG | 4 cut(s) | 541, 1324, 2052, 2428 |
| BpuMI | CCSGG | 2 cut(s) | 756, 1892 |
| BsaJI | CCNNGG | 8 cut(s) | 204, 1316, 1722, 1753, 1804, 2188, 2205, 2266 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2404, 2434 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 113, 238, 761, 1344, 1422, 1755, 1778, 1824, 2272 |
| Bse1I | ACTGG | 3 cut(s) | 1214, 2093, 2221 |
| Bse21I | CCTNAGG | 2 cut(s) | 935, 1908 |
| Bse3DI | GCAATG | 2 cut(s) | 1266, 2231 |
| BseBI | CCWGG | 3 cut(s) | 1773, 2042, 2268 |
| BseDI | CCNNGG | 8 cut(s) | 204, 1316, 1722, 1753, 1804, 2188, 2205, 2266 |
| BseGI | GGATG | 6 cut(s) | 1313, 1353, 1365, 1809, 1814, 2347 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 113, 238, 761, 1344, 1422, 1755, 1778, 1824, 2272 |
| BseMI | GCAATG | 2 cut(s) | 1266, 2231 |
| BseMII | CTCAG | 7 cut(s) | 87, 140, 926, 1452, 1728, 1922, 2301 |
| BseNI | ACTGG | 3 cut(s) | 1214, 2093, 2221 |
| BseRI | GAGGAG | 5 cut(s) | 166, 169, 638, 2071, 2425 |
| BseSI | GKGCMC | 2 cut(s) | 260, 311 |
| BseXI | GCAGC | 5 cut(s) | 1126, 1250, 1611, 2240, 2419 |
| BsgI | GTGCAG | 1 cut(s) | 2247 |
| BshFI | GGCC | 3 cut(s) | 738, 1213, 1356 |
| BshNI | GGYRCC | 2 cut(s) | 308, 1894 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1430, 1578, 2286 |
| BsiSI | CCGG | 2 cut(s) | 756, 1892 |
| BslFI | GGGAC | 3 cut(s) | 844, 1771, 1874 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 113, 238, 761, 1344, 1422, 1755, 1778, 1824, 2272 |
| BsmAI | GTCTC | 1 cut(s) | 608 |
| BsmBI | CGTCTC | 1 cut(s) | 608 |
| BsmFI | GGGAC | 3 cut(s) | 844, 1771, 1874 |
| BsmI | GAATGC | 2 cut(s) | 272, 941 |
| BsnI | GGCC | 3 cut(s) | 738, 1213, 1356 |
| Bsp1286I | GDGCHC | 5 cut(s) | 260, 311, 1430, 1578, 2286 |
| Bsp1407I | TGTACA | 2 cut(s) | 399, 1662 |
| Bsp143I | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| Bsp19I | CCATGG | 2 cut(s) | 204, 1722 |
| BspACI | CCGC | 5 cut(s) | 126, 726, 823, 1592, 2339 |
| BspANI | GGCC | 3 cut(s) | 738, 1213, 1356 |
| BspCNI | CTCAG | 7 cut(s) | 88, 141, 927, 1453, 1729, 1921, 2300 |
| BspHI | TCATGA | 1 cut(s) | 1731 |
| BspLI | GGNNCC | 5 cut(s) | 310, 1747, 1896, 1905, 2129 |
| BspMAI | CTGCAG | 1 cut(s) | 744 |
| BspPI | GGATC | 3 cut(s) | 151, 898, 2200 |
| BspT107I | GGYRCC | 2 cut(s) | 308, 1894 |
| BsrDI | GCAATG | 2 cut(s) | 1266, 2231 |
| BsrGI | TGTACA | 2 cut(s) | 399, 1662 |
| BsrI | ACTGG | 3 cut(s) | 1214, 2093, 2221 |
| BssECI | CCNNGG | 8 cut(s) | 204, 1316, 1722, 1753, 1804, 2188, 2205, 2266 |
| BssMI | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| BssSI | CACGAG | 1 cut(s) | 800 |
| BssT1I | CCWWGG | 6 cut(s) | 204, 1316, 1722, 1753, 1804, 2188 |
| Bst2BI | CACGAG | 1 cut(s) | 800 |
| Bst2UI | CCWGG | 3 cut(s) | 1773, 2042, 2268 |
| Bst4CI | ACNGT | 5 cut(s) | 931, 1762, 2105, 2420, 2446 |
| Bst6I | CTCTTC | 2 cut(s) | 587, 1908 |
| BstAUI | TGTACA | 2 cut(s) | 399, 1662 |
| BstC8I | GCNNGC | 4 cut(s) | 540, 740, 1252, 2331 |
| BstDEI | CTNAG | 7 cut(s) | 96, 149, 935, 1461, 1737, 1908, 2287 |
| BstDSI | CCRYGG | 2 cut(s) | 204, 1722 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1342 |
| BstF5I | GGATG | 6 cut(s) | 1313, 1353, 1365, 1809, 1814, 2347 |
| BstKTI | GATC | 6 cut(s) | 146, 632, 893, 2008, 2074, 2195 |
| BstMAI | GTCTC | 1 cut(s) | 608 |
| BstMBI | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 998, 1046, 1235, 1247, 1256, 2432 |
| BstNI | CCWGG | 3 cut(s) | 1773, 2042, 2268 |
| BstNSI | RCATGY | 1 cut(s) | 2339 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2268 |
| BstSCI | CCNGG | 5 cut(s) | 754, 1771, 1890, 2040, 2266 |
| BstSFI | CTRYAG | 1 cut(s) | 740 |
| BstSLI | GKGCMC | 2 cut(s) | 260, 311 |
| BstV1I | GCAGC | 5 cut(s) | 1126, 1250, 1611, 2240, 2419 |
| BstV2I | GAAGAC | 2 cut(s) | 1939, 2268 |
| BstX2I | RGATCY | 4 cut(s) | 143, 890, 2071, 2192 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1492 |
| BstYI | RGATCY | 4 cut(s) | 143, 890, 2071, 2192 |
| Bsu36I | CCTNAGG | 2 cut(s) | 935, 1908 |
| BsuRI | GGCC | 3 cut(s) | 738, 1213, 1356 |
| BtgI | CCRYGG | 2 cut(s) | 204, 1722 |
| BtgZI | GCGATG | 2 cut(s) | 1256, 2154 |
| BtsCI | GGATG | 6 cut(s) | 1313, 1353, 1365, 1809, 1814, 2347 |
| BtsIMutI | CAGTG | 6 cut(s) | 491, 723, 739, 2110, 2230, 2442 |
| Cac8I | GCNNGC | 4 cut(s) | 540, 740, 1252, 2331 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1034 |
| CciI | TCATGA | 1 cut(s) | 1731 |
| Cfr13I | GGNCC | 1 cut(s) | 1354 |
| Csp6I | GTAC | 9 cut(s) | 400, 487, 1070, 1193, 1663, 1693, 2086, 2278, 2398 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1420, 1455 |
| CviQI | GTAC | 9 cut(s) | 400, 487, 1070, 1193, 1663, 1693, 2086, 2278, 2398 |
| DdeI | CTNAG | 7 cut(s) | 96, 149, 935, 1461, 1737, 1908, 2287 |
| DpnI | GATC | 6 cut(s) | 145, 631, 892, 2007, 2073, 2194 |
| DpnII | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| DraIII | CACNNNGTG | 1 cut(s) | 287 |
| EaeI | YGGCCR | 1 cut(s) | 1211 |
| Eam1104I | CTCTTC | 2 cut(s) | 587, 1908 |
| EarI | CTCTTC | 2 cut(s) | 587, 1908 |
| EciI | GGCGGA | 1 cut(s) | 141 |
| Ecl136II | GAGCTC | 2 cut(s) | 1576, 2284 |
| Eco130I | CCWWGG | 6 cut(s) | 204, 1316, 1722, 1753, 1804, 2188 |
| Eco24I | GRGCYC | 2 cut(s) | 1578, 2286 |
| Eco32I | GATATC | 2 cut(s) | 1266, 1719 |
| Eco53kI | GAGCTC | 2 cut(s) | 1576, 2284 |
| Eco57I | CTGAAG | 3 cut(s) | 935, 1056, 1343 |
| Eco81I | CCTNAGG | 2 cut(s) | 935, 1908 |
| EcoICRI | GAGCTC | 2 cut(s) | 1576, 2284 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1342 |
| EcoRII | CCWGG | 3 cut(s) | 1771, 2040, 2266 |
| EcoRV | GATATC | 2 cut(s) | 1266, 1719 |
| EcoT14I | CCWWGG | 6 cut(s) | 204, 1316, 1722, 1753, 1804, 2188 |
| EcoT22I | ATGCAT | 2 cut(s) | 1025, 1450 |
| EcoT38I | GRGCYC | 2 cut(s) | 1578, 2286 |
| ErhI | CCWWGG | 6 cut(s) | 204, 1316, 1722, 1753, 1804, 2188 |
| Esp3I | CGTCTC | 1 cut(s) | 608 |
| FaqI | GGGAC | 3 cut(s) | 844, 1771, 1874 |
| FauNDI | CATATG | 2 cut(s) | 1450, 1956 |
| Fnu4HI | GCNGC | 5 cut(s) | 1140, 1239, 1625, 2229, 2433 |
| FokI | GGATG | 6 cut(s) | 1320, 1352, 1360, 1796, 1801, 2354 |
| FriOI | GRGCYC | 2 cut(s) | 1578, 2286 |
| Fsp4HI | GCNGC | 5 cut(s) | 1140, 1239, 1625, 2229, 2433 |
| FspBI | CTAG | 5 cut(s) | 392, 834, 1488, 1865, 2241 |
| GluI | GCNGC | 5 cut(s) | 1140, 1239, 1625, 2229, 2433 |
| GsuI | CTGGAG | 3 cut(s) | 567, 2063, 2294 |
| HaeIII | GGCC | 3 cut(s) | 738, 1213, 1356 |
| HapII | CCGG | 2 cut(s) | 756, 1892 |
| HindIII | AAGCTT | 1 cut(s) | 559 |
| HpaII | CCGG | 2 cut(s) | 756, 1892 |
| HphI | GGTGA | 5 cut(s) | 311, 361, 758, 1507, 2000 |
| Hpy166II | GTNNAC | 2 cut(s) | 402, 1333 |
| Hpy188I | TCNGA | 9 cut(s) | 150, 364, 1425, 1781, 1931, 1998, 2101, 2209, 2257 |
| Hpy8I | GTNNAC | 2 cut(s) | 402, 1333 |
| HpyAV | CCTTC | 6 cut(s) | 117, 461, 1099, 1844, 1993, 2129 |
| HpyCH4III | ACNGT | 5 cut(s) | 931, 1762, 2105, 2420, 2446 |
| HpyCH4IV | ACGT | 1 cut(s) | 617 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 998, 1046, 1235, 1247, 1256, 2432 |
| HpyF3I | CTNAG | 7 cut(s) | 96, 149, 935, 1461, 1737, 1908, 2287 |
| HpySE526I | ACGT | 1 cut(s) | 617 |
| Kzo9I | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| LmnI | GCTCC | 3 cut(s) | 1031, 1425, 1751 |
| Lsp1109I | GCAGC | 5 cut(s) | 1126, 1250, 1611, 2240, 2419 |
| LweI | GCATC | 4 cut(s) | 1298, 1818, 1887, 2160 |
| MaeI | CTAG | 5 cut(s) | 392, 834, 1488, 1865, 2241 |
| MaeII | ACGT | 1 cut(s) | 617 |
| MaeIII | GTNAC | 4 cut(s) | 299, 1480, 1495, 1982 |
| MalI | GATC | 6 cut(s) | 145, 631, 892, 2007, 2073, 2194 |
| MboI | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| MfeI | CAATTG | 2 cut(s) | 405, 1378 |
| MflI | RGATCY | 4 cut(s) | 143, 890, 2071, 2192 |
| MhlI | GDGCHC | 5 cut(s) | 260, 311, 1430, 1578, 2286 |
| MlsI | TGGCCA | 1 cut(s) | 1213 |
| MluNI | TGGCCA | 1 cut(s) | 1213 |
| MlyI | GAGTC | 2 cut(s) | 91, 2178 |
| Mox20I | TGGCCA | 1 cut(s) | 1213 |
| Mph1103I | ATGCAT | 2 cut(s) | 1025, 1450 |
| MscI | TGGCCA | 1 cut(s) | 1213 |
| MseI | TTAA | 1 cut(s) | 516 |
| MslI | CAYNNNNRTG | 4 cut(s) | 496, 1279, 2340, 2468 |
| Msp20I | TGGCCA | 1 cut(s) | 1213 |
| MspA1I | CMGCKG | 3 cut(s) | 542, 728, 823 |
| MspI | CCGG | 2 cut(s) | 756, 1892 |
| MspR9I | CCNGG | 5 cut(s) | 756, 1773, 1892, 2042, 2268 |
| MunI | CAATTG | 2 cut(s) | 405, 1378 |
| Mva1269I | GAATGC | 2 cut(s) | 272, 941 |
| MvaI | CCWGG | 3 cut(s) | 1773, 2042, 2268 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 998, 1046, 1235, 1247, 1256, 2432 |
| NciI | CCSGG | 2 cut(s) | 756, 1892 |
| NcoI | CCATGG | 2 cut(s) | 204, 1722 |
| NdeI | CATATG | 2 cut(s) | 1450, 1956 |
| NdeII | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| NlaIV | GGNNCC | 5 cut(s) | 310, 1747, 1896, 1905, 2129 |
| NmuCI | GTSAC | 2 cut(s) | 299, 1495 |
| NsiI | ATGCAT | 2 cut(s) | 1025, 1450 |
| NspI | RCATGY | 1 cut(s) | 2339 |
| PagI | TCATGA | 1 cut(s) | 1731 |
| PctI | GAATGC | 2 cut(s) | 272, 941 |
| PfoI | TCCNGGA | 1 cut(s) | 754 |
| PkrI | GCNGC | 5 cut(s) | 1141, 1240, 1626, 2230, 2434 |
| PleI | GAGTC | 2 cut(s) | 90, 2178 |
| PpsI | GAGTC | 2 cut(s) | 90, 2178 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2268 |
| Psp124BI | GAGCTC | 2 cut(s) | 1578, 2286 |
| Psp6I | CCWGG | 3 cut(s) | 1771, 2040, 2266 |
| PspGI | CCWGG | 3 cut(s) | 1771, 2040, 2266 |
| PspN4I | GGNNCC | 5 cut(s) | 310, 1747, 1896, 1905, 2129 |
| PspPI | GGNCC | 1 cut(s) | 1354 |
| PstI | CTGCAG | 1 cut(s) | 744 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1034 |
| PsuI | RGATCY | 4 cut(s) | 143, 890, 2071, 2192 |
| PvuII | CAGCTG | 1 cut(s) | 542 |
| RsaI | GTAC | 9 cut(s) | 401, 488, 1071, 1194, 1664, 1694, 2087, 2279, 2399 |
| RsaNI | GTAC | 9 cut(s) | 400, 487, 1070, 1193, 1663, 1693, 2086, 2278, 2398 |
| RseI | CAYNNNNRTG | 4 cut(s) | 496, 1279, 2340, 2468 |
| SacI | GAGCTC | 2 cut(s) | 1578, 2286 |
| SaqAI | TTAA | 1 cut(s) | 516 |
| SatI | GCNGC | 5 cut(s) | 1140, 1239, 1625, 2229, 2433 |
| Sau3AI | GATC | 6 cut(s) | 143, 629, 890, 2005, 2071, 2192 |
| Sau96I | GGNCC | 1 cut(s) | 1354 |
| SbfI | CCTGCAGG | 1 cut(s) | 744 |
| ScaI | AGTACT | 1 cut(s) | 2087 |
| SchI | GAGTC | 2 cut(s) | 91, 2178 |
| ScrFI | CCNGG | 5 cut(s) | 756, 1773, 1892, 2042, 2268 |
| SdaI | CCTGCAGG | 1 cut(s) | 744 |
| SduI | GDGCHC | 5 cut(s) | 260, 311, 1430, 1578, 2286 |
| SfaNI | GCATC | 4 cut(s) | 1298, 1818, 1887, 2160 |
| SfcI | CTRYAG | 1 cut(s) | 740 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 496, 1279, 2340, 2468 |
| SmlI | CTYRAG | 4 cut(s) | 556, 1339, 2067, 2407 |
| SmoI | CTYRAG | 4 cut(s) | 556, 1339, 2067, 2407 |
| SpeI | ACTAGT | 2 cut(s) | 391, 833 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 744 |
| SsiI | CCGC | 5 cut(s) | 126, 726, 823, 1592, 2339 |
| SspI | AATATT | 1 cut(s) | 1179 |
| SspMI | CTAG | 5 cut(s) | 392, 834, 1488, 1865, 2241 |
| SstI | GAGCTC | 2 cut(s) | 1578, 2286 |
| StyD4I | CCNGG | 5 cut(s) | 754, 1771, 1890, 2040, 2266 |
| StyI | CCWWGG | 6 cut(s) | 204, 1316, 1722, 1753, 1804, 2188 |
| TaaI | ACNGT | 5 cut(s) | 931, 1762, 2105, 2420, 2446 |
| TaiI | ACGT | 1 cut(s) | 620 |
| TaqI | TCGA | 3 cut(s) | 47, 65, 2422 |
| TatI | WGTACW | 4 cut(s) | 399, 486, 1662, 2085 |
| Tru1I | TTAA | 1 cut(s) | 516 |
| Tru9I | TTAA | 1 cut(s) | 516 |
| TscAI | CASTG | 6 cut(s) | 498, 723, 739, 2110, 2230, 2449 |
| TseFI | GTSAC | 2 cut(s) | 299, 1495 |
| TseI | GCWGC | 5 cut(s) | 1139, 1238, 1624, 2228, 2432 |
| Tsp45I | GTSAC | 2 cut(s) | 299, 1495 |
| TspDTI | ATGAA | 9 cut(s) | 561, 1166, 1269, 1720, 2004, 2109, 2166, 2274, 2471 |
| TspGWI | ACGGA | 2 cut(s) | 1952, 2415 |
| TspRI | CASTG | 6 cut(s) | 498, 723, 739, 2110, 2230, 2449 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1342 |
| XapI | RAATTY | 1 cut(s) | 1359 |
| XceI | RCATGY | 1 cut(s) | 2339 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1534 |
| XspI | CTAG | 5 cut(s) | 392, 834, 1488, 1865, 2241 |
| ZrmI | AGTACT | 1 cut(s) | 2087 |
| Zsp2I | ATGCAT | 2 cut(s) | 1025, 1450 |