Rorug04G0421400

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
58141094 .. 58144466
3373 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0421400.1

Sequence Viewer

Length: 1110 bp
ATGGCGCAGCAGCCACCCATAGGGCCACCAAAGCGTCCGGCCCAGAACAAGAAGGGCCATTCTTCCGATTGGGTCTCCGGGACAGATCCCTCAGACGCGTCGCGAAGATGGATGGGAGTAGGCCCATTCGATGTTTGCTCCTACATCAACCAAATCCCAAGCGGGGGGAGCTTCTTCACCAACCAGGTCCAACTTCATGATGTGGGTGCGAACACTCCGCGAAACGACGACCAGATTGGAAATGCTCATGGAGGTGTTGCTGCTACAAACCCAATTCAAGCATCGTTTGGAAATGCTCATGGCGGAGGCTCCGGCGCTACAAACCCAATTCAAGCATCGTTTGGAAATGCTCATGGCGGAGGCTCCGGCGCTACCAACCCAATTCAAGCATCGTTTGGAAATGCCAACAAAGATAATGAGATGCGTGATGCCACAAAGGTTGAAAAGCTCCGCCCAGACATGTCGGATGTCACTCTCACTGTAAAGGTTGTTAGTACTAAGATAGTAGGTATGCCATTTGCTGACTGCTTGGTTGGCGATGAAACTGGAATGATAATCTTCAGAGCTACAATCGATCAAGTGGACTTGATGAAAGAGGGTTTGACTGTAACTCTGCAAAATGCCAAAGTTGACATGTTCAATGATTCAATGAGGCTTGTTGTCGACGAAAGTGGCAGTGTTCAAGTTGCTGAGCCTGCCGGTTTTACTGTGAAGGAAGATAGCAACCTCTCACTCATTCAAGCATCGATTGGAAATGTCAACAAAGACAATGCCATAAAGGTTGAAAAGCTCCGCCCAGACATGTCAGATGTCACTCTCACTGTAAAGGTTGTTAGTACTAAGATAGTAGGTATGCAATTTGCTGACTACTTGGTTGGCGATGAAACTGGAATGATAGTCTTCAGAGCTACAAACGATCAAGTGGACTTGATGAAAGAGGGTTTGACTGTAACTCTGCAAAATGCCAAAGTTGACATGTTCGAAGATTCAATGAGGCTTGTTGTCGACGAAAGTGGCAGTGTTCAAGTTGCTGAGCCTGCCTGTTTTACTGTGAAGGAAGATAACAACCTCTCACTCATTGAATTTGAATGTGTCCAGGTTTATACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

369

Amino Acids

39.4

Weight (kDa)

4.7

Isoelectric Point (pI)

23.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OB_Ssb-like PF21473 150 - 229 3.6e-23 Single-stranded DNA binding protein Ssb-like, OB fold
OB_Ssb-like PF21473 264 - 343 1.7e-23 Single-stranded DNA binding protein Ssb-like, OB fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 663, 1005
AccII CGCG 3 cut(s) 98, 103, 220
AciI CCGC 6 cut(s) 162, 218, 303, 357, 451, 793
AclWI GGATC 1 cut(s) 80
AcsI RAATTY 1 cut(s) 1082
AcuI CTGAAG 2 cut(s) 544, 886
AfaI GTAC 2 cut(s) 496, 838
AfiI CCNNNNNNNGG 3 cut(s) 20, 163, 164
AflIII ACRYGT 5 cut(s) 96, 459, 633, 801, 975
AjnI CCWGG 2 cut(s) 183, 1095
AluBI AGCT 5 cut(s) 171, 448, 566, 790, 908
AluI AGCT 5 cut(s) 171, 448, 566, 790, 908
Alw26I GTCTC 1 cut(s) 79
AlwI GGATC 1 cut(s) 80
AoxI GGCC 4 cut(s) 23, 39, 55, 121
ApeKI GCWGC 3 cut(s) 7, 10, 260
ApoI RAATTY 1 cut(s) 1082
AspLEI GCGC 3 cut(s) 7, 317, 371
AspS9I GGNCC 5 cut(s) 23, 40, 55, 122, 187
AsuC2I CCSGG 1 cut(s) 79
AsuHPI GGTGA 1 cut(s) 169
AsuII TTCGAA 1 cut(s) 981
AvaII GGWCC 1 cut(s) 187
BbsI GAAGAC 1 cut(s) 892
BbvI GCAGC 3 cut(s) 19, 22, 247
BccI CCATC 2 cut(s) 102, 106
BciT130I CCWGG 2 cut(s) 185, 1097
BcnI CCSGG 1 cut(s) 79
BcoDI GTCTC 1 cut(s) 79
BfoI RGCGCY 2 cut(s) 318, 372
BisI GCNGC 3 cut(s) 8, 11, 261
BlpI GCTNAGC 2 cut(s) 690, 1032
BlsI GCNGC 3 cut(s) 9, 12, 262
BmcAI AGTACT 2 cut(s) 496, 838
Bme1390I CCNGG 3 cut(s) 79, 185, 1097
Bme18I GGWCC 1 cut(s) 187
BmgT120I GGNCC 5 cut(s) 23, 40, 55, 122, 187
BmiI GGNNCC 2 cut(s) 310, 364
BmrFI CCNGG 3 cut(s) 79, 185, 1097
BmsI GCATC 6 cut(s) 290, 344, 398, 411, 418, 752
BpiI GAAGAC 1 cut(s) 892
Bpu1102I GCTNAGC 2 cut(s) 690, 1032
Bpu14I TTCGAA 1 cut(s) 981
BpuMI CCSGG 1 cut(s) 79
Bsa29I ATCGAT 2 cut(s) 573, 746
BsaI GGTCTC 1 cut(s) 79
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 163, 164
Bse118I RCCGGY 1 cut(s) 698
Bse1I ACTGG 2 cut(s) 550, 892
BseBI CCWGG 2 cut(s) 185, 1097
BseCI ATCGAT 2 cut(s) 573, 746
BseGI GGATG 2 cut(s) 117, 472
BseLI CCNNNNNNNGG 3 cut(s) 20, 163, 164
BseMII CTCAG 3 cut(s) 105, 681, 1023
BseNI ACTGG 2 cut(s) 550, 892
BseXI GCAGC 3 cut(s) 19, 22, 247
Bsh1236I CGCG 3 cut(s) 98, 103, 220
BshFI GGCC 4 cut(s) 25, 41, 57, 123
BshVI ATCGAT 2 cut(s) 573, 746
BsiSI CCGG 5 cut(s) 38, 78, 312, 366, 699
BslFI GGGAC 1 cut(s) 94
BslI CCNNNNNNNGG 3 cut(s) 20, 163, 164
BsmAI GTCTC 1 cut(s) 79
BsmFI GGGAC 1 cut(s) 94
BsnI GGCC 4 cut(s) 25, 41, 57, 123
Bso31I GGTCTC 1 cut(s) 79
Bsp119I TTCGAA 1 cut(s) 981
Bsp143I GATC 3 cut(s) 85, 574, 916
Bsp1720I GCTNAGC 2 cut(s) 690, 1032
Bsp68I TCGCGA 1 cut(s) 103
BspACI CCGC 6 cut(s) 162, 218, 303, 357, 451, 793
BspANI GGCC 4 cut(s) 25, 41, 57, 123
BspCNI CTCAG 3 cut(s) 104, 682, 1024
BspDI ATCGAT 2 cut(s) 573, 746
BspFNI CGCG 3 cut(s) 98, 103, 220
BspHI TCATGA 1 cut(s) 196
BspLI GGNNCC 2 cut(s) 310, 364
BspPI GGATC 1 cut(s) 80
BspT104I TTCGAA 1 cut(s) 981
BspTNI GGTCTC 1 cut(s) 79
BsrFI RCCGGY 1 cut(s) 698
BsrI ACTGG 2 cut(s) 550, 892
BssAI RCCGGY 1 cut(s) 698
BssMI GATC 3 cut(s) 85, 574, 916
Bst2UI CCWGG 2 cut(s) 185, 1097
Bst4CI ACNGT 6 cut(s) 481, 607, 709, 823, 949, 1051
BstBI TTCGAA 1 cut(s) 981
BstC8I GCNNGC 2 cut(s) 696, 1038
BstDEI CTNAG 5 cut(s) 91, 498, 690, 840, 1032
BstF5I GGATG 2 cut(s) 117, 472
BstFNI CGCG 3 cut(s) 98, 103, 220
BstH2I RGCGCY 2 cut(s) 318, 372
BstHHI GCGC 3 cut(s) 7, 317, 371
BstKTI GATC 3 cut(s) 88, 577, 919
BstMAI GTCTC 1 cut(s) 79
BstMBI GATC 3 cut(s) 85, 574, 916
BstMWI GCNNNNNNNGC 5 cut(s) 31, 168, 534, 695, 1037
BstNI CCWGG 2 cut(s) 185, 1097
BstNSI RCATGY 4 cut(s) 463, 637, 805, 979
BstSCI CCNGG 3 cut(s) 77, 183, 1095
BstUI CGCG 3 cut(s) 98, 103, 220
BstV1I GCAGC 3 cut(s) 19, 22, 247
BstV2I GAAGAC 1 cut(s) 892
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
Bsu15I ATCGAT 2 cut(s) 573, 746
BsuRI GGCC 4 cut(s) 25, 41, 57, 123
BsuTUI ATCGAT 2 cut(s) 573, 746
BtgZI GCGATG 2 cut(s) 552, 894
BtsCI GGATG 2 cut(s) 117, 472
BtsI GCAGTG 2 cut(s) 682, 1024
BtsIMutI CAGTG 4 cut(s) 477, 682, 819, 1024
BtuMI TCGCGA 1 cut(s) 103
Cac8I GCNNGC 2 cut(s) 696, 1038
CciI TCATGA 1 cut(s) 196
CfoI GCGC 3 cut(s) 7, 317, 371
Cfr10I RCCGGY 1 cut(s) 698
Cfr13I GGNCC 5 cut(s) 23, 40, 55, 122, 187
ClaI ATCGAT 2 cut(s) 573, 746
CseI GACGC 3 cut(s) 23, 87, 104
CsiI ACCWGGT 1 cut(s) 183
Csp6I GTAC 2 cut(s) 495, 837
CspCI CAANNNNNGTGG 2 cut(s) 421, 456
CviAII CATG 9 cut(s) 197, 248, 299, 353, 460, 634, 802, 976, 1107
CviQI GTAC 2 cut(s) 495, 837
DdeI CTNAG 5 cut(s) 91, 498, 690, 840, 1032
DpnI GATC 3 cut(s) 87, 576, 918
DpnII GATC 3 cut(s) 85, 574, 916
EciI GGCGGA 4 cut(s) 318, 372, 440, 782
Eco31I GGTCTC 1 cut(s) 79
Eco47I GGWCC 1 cut(s) 187
Eco57I CTGAAG 2 cut(s) 544, 886
EcoRII CCWGG 2 cut(s) 183, 1095
FaeI CATG 9 cut(s) 200, 251, 302, 356, 463, 637, 805, 979, 1110
FaqI GGGAC 1 cut(s) 94
FatI CATG 9 cut(s) 196, 247, 298, 352, 459, 633, 801, 975, 1106
FauI CCCGC 1 cut(s) 155
FblI GTMKAC 2 cut(s) 663, 1005
Fnu4HI GCNGC 3 cut(s) 8, 11, 261
FokI GGATG 2 cut(s) 124, 479
Fsp4HI GCNGC 3 cut(s) 8, 11, 261
GlaI GCGC 3 cut(s) 6, 316, 370
GluI GCNGC 3 cut(s) 8, 11, 261
HaeII RGCGCY 2 cut(s) 318, 372
HaeIII GGCC 4 cut(s) 25, 41, 57, 123
HapII CCGG 5 cut(s) 38, 78, 312, 366, 699
HgaI GACGC 3 cut(s) 23, 87, 104
HhaI GCGC 3 cut(s) 7, 317, 371
Hin1II CATG 9 cut(s) 200, 251, 302, 356, 463, 637, 805, 979, 1110
Hin6I GCGC 3 cut(s) 5, 315, 369
HinP1I GCGC 3 cut(s) 5, 315, 369
HincII GTYRAC 5 cut(s) 631, 664, 760, 973, 1006
HindII GTYRAC 5 cut(s) 631, 664, 760, 973, 1006
HinfI GANTC 2 cut(s) 644, 986
HpaII CCGG 5 cut(s) 38, 78, 312, 366, 699
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 7 cut(s) 583, 631, 664, 760, 925, 973, 1006
Hpy188I TCNGA 6 cut(s) 67, 94, 466, 563, 808, 905
Hpy188III TCNNGA 2 cut(s) 102, 197
Hpy8I GTNNAC 7 cut(s) 583, 631, 664, 760, 925, 973, 1006
Hpy99I CGWCG 4 cut(s) 103, 230, 668, 1010
HpyAV CCTTC 3 cut(s) 46, 706, 1048
HpyCH4III ACNGT 6 cut(s) 481, 607, 709, 823, 949, 1051
HpyCH4V TGCA 3 cut(s) 616, 856, 958
HpyF10VI GCNNNNNNNGC 5 cut(s) 31, 168, 534, 695, 1037
HpyF3I CTNAG 5 cut(s) 91, 498, 690, 840, 1032
Hsp92II CATG 9 cut(s) 200, 251, 302, 356, 463, 637, 805, 979, 1110
HspAI GCGC 3 cut(s) 5, 315, 369
Kzo9I GATC 3 cut(s) 85, 574, 916
LmnI GCTCC 6 cut(s) 143, 168, 314, 368, 453, 795
Lsp1109I GCAGC 3 cut(s) 19, 22, 247
LweI GCATC 6 cut(s) 290, 344, 398, 411, 418, 752
MabI ACCWGGT 1 cut(s) 183
MaeIII GTNAC 4 cut(s) 469, 607, 811, 949
MalI GATC 3 cut(s) 87, 576, 918
MboI GATC 3 cut(s) 85, 574, 916
MboII GAAGA 8 cut(s) 54, 117, 166, 550, 728, 892, 995, 1070
MflI RGATCY 1 cut(s) 85
MluCI AATT 5 cut(s) 273, 327, 381, 857, 1082
MluI ACGCGT 1 cut(s) 96
MmeI TCCRAC 2 cut(s) 214, 444
MslI CAYNNNNRTG 1 cut(s) 252
MspI CCGG 5 cut(s) 38, 78, 312, 366, 699
MspR9I CCNGG 3 cut(s) 79, 185, 1097
MvaI CCWGG 2 cut(s) 185, 1097
MvnI CGCG 3 cut(s) 98, 103, 220
MwoI GCNNNNNNNGC 5 cut(s) 31, 168, 534, 695, 1037
NciI CCSGG 1 cut(s) 79
NdeII GATC 3 cut(s) 85, 574, 916
NlaIII CATG 9 cut(s) 200, 251, 302, 356, 463, 637, 805, 979, 1110
NlaIV GGNNCC 2 cut(s) 310, 364
NmuCI GTSAC 2 cut(s) 469, 811
NruI TCGCGA 1 cut(s) 103
NspI RCATGY 4 cut(s) 463, 637, 805, 979
NspV TTCGAA 1 cut(s) 981
PagI TCATGA 1 cut(s) 196
PciI ACATGT 4 cut(s) 459, 633, 801, 975
PfeI GAWTC 2 cut(s) 644, 986
PfoI TCCNGGA 1 cut(s) 77
PkrI GCNGC 3 cut(s) 9, 12, 262
PscI ACATGT 4 cut(s) 459, 633, 801, 975
Psp6I CCWGG 2 cut(s) 183, 1095
PspGI CCWGG 2 cut(s) 183, 1095
PspN4I GGNNCC 2 cut(s) 310, 364
PspPI GGNCC 5 cut(s) 23, 40, 55, 122, 187
PsuI RGATCY 1 cut(s) 85
RruI TCGCGA 1 cut(s) 103
RsaI GTAC 2 cut(s) 496, 838
RsaNI GTAC 2 cut(s) 495, 837
RseI CAYNNNNRTG 1 cut(s) 252
SalI GTCGAC 2 cut(s) 662, 1004
SatI GCNGC 3 cut(s) 8, 11, 261
Sau3AI GATC 3 cut(s) 85, 574, 916
Sau96I GGNCC 5 cut(s) 23, 40, 55, 122, 187
ScaI AGTACT 2 cut(s) 496, 838
ScrFI CCNGG 3 cut(s) 79, 185, 1097
SexAI ACCWGGT 1 cut(s) 183
SfaNI GCATC 6 cut(s) 290, 344, 398, 411, 418, 752
SfuI TTCGAA 1 cut(s) 981
SinI GGWCC 1 cut(s) 187
SmiMI CAYNNNNRTG 1 cut(s) 252
Sse9I AATT 5 cut(s) 273, 327, 381, 857, 1082
SsiI CCGC 6 cut(s) 162, 218, 303, 357, 451, 793
StyD4I CCNGG 3 cut(s) 77, 183, 1095
TaaI ACNGT 6 cut(s) 481, 607, 709, 823, 949, 1051
TaqI TCGA 6 cut(s) 129, 573, 663, 746, 981, 1005
TasI AATT 5 cut(s) 273, 327, 381, 857, 1082
TatI WGTACW 2 cut(s) 494, 836
TfiI GAWTC 2 cut(s) 644, 986
TscAI CASTG 4 cut(s) 484, 682, 826, 1024
TseFI GTSAC 2 cut(s) 469, 811
TseI GCWGC 3 cut(s) 7, 10, 260
Tsp45I GTSAC 2 cut(s) 469, 811
TspDTI ATGAA 5 cut(s) 185, 555, 605, 897, 947
TspRI CASTG 4 cut(s) 484, 682, 826, 1024
VpaK11BI GGWCC 1 cut(s) 187
XapI RAATTY 1 cut(s) 1082
XceI RCATGY 4 cut(s) 463, 637, 805, 979
XmiI GTMKAC 2 cut(s) 663, 1005
ZrmI AGTACT 2 cut(s) 496, 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.