Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0017722

Physical Location & Seq

Genomic Coordinates Reverse (-)

24979444 .. 24981172

Gene Structure 1729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1159200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGGTTGACGTCGACGGAGAGAAACAATGGAAGAAGGTTGAGGTGAAGCTCACAGATCATGTTCACGTCCCTATTTTTCCATCTGGAGTATTGCCACCTGAGTCTTACGACCTTTATCTCGGTGACTACATATCAAAAGTAGTACTGGAAAAATACCCAGAAGACAAACCACTGTGGGAAGTTCACATAATCAAATATCCAACTTCCACTGCAGCGGGTAACCTAATATTCAAGCTTCACCATGCACTTGGCGATGGCTACTCCTTCATGAGTGCTTTTCTTTCTTGTCTGCAAAGAGCTGACGATCCTTCTCTTCCTCTAACTTTTCCGTCGCGCCGAGGTTCCGAGAGAAAGGGACTTGACAATTATTATAAGAGTGCTTTGAGGTGGGTGTCTCAGAAATTGACCTCAGCTTTTTATGCTGTGAAGGATTTGGGTTGGAGCGCTTTCGTTGAAGATGATCGAACACCGATAAGATCTGGGAATTCAGGAGTTGAGTTTCTTCCAATGGATATATCAAGCTTGATATTCTCCCTTGATGAAATCAAACTAATCAAGAACAAGCTCAACGTGACGATAAATGATGTGACATGTGGAATAGTGTTCTTTGCTACTAGACTGTACATGCAAGAGATTATTAATAATAACCAAAAATCAAGCAGCGCAGCAAGCTGCCGAGCGCTGGTGTTGGTCAATACTAGGATCACTCATGGTGATTACAAGCCGGTGAAGCAGATGATCGGACCCAATTCTGAGATGCCATGGGGGAACCGAATCGCTTTCATGCCGGTTTCCATGCCCAATTTAACTGAAATCTCGAACCCGCTGGACTTCGTCTTCGAAGCACAAAAGCGTATTAAGAGGAAGAGGAGTTCTTTTTCTGTTTATTTCTATAACAAGCTATTTGAAATTGTGAGCAAGCTTAGAGGCCATGAGGCAGCATCAAGATACATGCACAACAGACTGATGAAGTCGAGCCTCATGATATCAAATATGATAGGGCCTGTCGAGAAAATAGCTTTGGCTGATCATCCAATCAAGGGTGTATACTTTATGGTTTTAGGTATACCTCAGGACATTATCATAACAATAGTCAGTTATATGGGTGACTTGAGGATTTCCTTTGGAACTCAGAAGGGTTTTATTGATCCTCAAAAGTTCAAGTCATGCTTGAAAAATGCGTTTGAGATGATACTAGAAGTGACAGACAAAATTCCTATACAGACGAAGGCATCTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1298 WES_acyltransf

Protein Analysis

414

Amino Acids

46.83

Weight (kDa)

9.12

Isoelectric Point (pI)

44.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WS_DGAT_cat	PF03007	41 - 196	9.7e-07	Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C	PF06974	255 - 398	2.1e-38	WS/DGAT C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017722)

Species	Orthologous Gene IDs
malus_domestica	MD10G1158900.v1.1 MD10G1159200.v1.1 MD10G1159300.v1.1 MD17G1238100.v1.1
prunus_persica	Prupe.3G140600_v2.0.a1 Prupe.3G141300_v2.0.a1
pyrus_communis	pycom10g13730 pycom10g13740 pycom17g24200
rosa_roxburghii	Rroxscaffold_1G00029720
rosa_samantha	Rh6BG155000 Rh6DG140200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	372
AatII	GACGTC	1 cut(s)	12
AccI	GTMKAC	3 cut(s)	12, 1047, 1066
AccII	CGCG	1 cut(s)	334
AciI	CCGC	2 cut(s)	215, 824
AclWI	GGATC	3 cut(s)	299, 710, 1142
AcsI	RAATTY	2 cut(s)	484, 1212
AcyI	GRCGYC	1 cut(s)	9
AfaI	GTAC	2 cut(s)	144, 623
AfeI	AGCGCT	2 cut(s)	445, 681
AfiI	CCNNNNNNNGG	2 cut(s)	682, 1040
AflIII	ACRYGT	1 cut(s)	590
AgsI	TTSAA	5 cut(s)	232, 455, 908, 1162, 1174
AjiI	CACGTC	1 cut(s)	67
AjuI	GAANNNNNNNTTGG	2 cut(s)	1004, 1036
AloI	GAACNNNNNNTCC	2 cut(s)	856, 888
Alw26I	GTCTC	1 cut(s)	399
AlwI	GGATC	3 cut(s)	299, 710, 1142
Aor51HI	AGCGCT	2 cut(s)	445, 681
AoxI	GGCC	2 cut(s)	928, 1001
ApeKI	GCWGC	5 cut(s)	212, 660, 665, 672, 938
ApoI	RAATTY	2 cut(s)	484, 1212
ArsI	GACNNNNNNTTYG	2 cut(s)	821, 853
AseI	ATTAAT	1 cut(s)	639
AspLEI	GCGC	4 cut(s)	336, 446, 665, 682
AspS9I	GGNCC	2 cut(s)	743, 1001
AsuHPI	GGTGA	6 cut(s)	55, 134, 230, 725, 739, 1118
AsuII	TTCGAA	1 cut(s)	840
AvaII	GGWCC	1 cut(s)	743
AxyI	CCTNAGG	1 cut(s)	1071
BbsI	GAAGAC	2 cut(s)	168, 829
BbvCI	CCTCAGC	1 cut(s)	409
BbvI	GCAGC	5 cut(s)	224, 659, 672, 677, 950
BccI	CCATC	2 cut(s)	88, 248
BclI	TGATCA	1 cut(s)	1027
BcoDI	GTCTC	1 cut(s)	399
BfaI	CTAG	3 cut(s)	615, 699, 1196
BfmI	CTRYAG	1 cut(s)	210
BfoI	RGCGCY	2 cut(s)	447, 683
BglII	AGATCT	1 cut(s)	476
BisI	GCNGC	5 cut(s)	213, 661, 666, 673, 939
BlsI	GCNGC	5 cut(s)	214, 662, 667, 674, 940
BmcAI	AGTACT	1 cut(s)	144
Bme18I	GGWCC	1 cut(s)	743
BmgBI	CACGTC	1 cut(s)	67
BmgT120I	GGNCC	2 cut(s)	743, 1001
BmiI	GGNNCC	3 cut(s)	343, 745, 770
BmsI	GCATC	2 cut(s)	747, 950
BpiI	GAAGAC	2 cut(s)	168, 829
BpmI	CTGGAG	1 cut(s)	105
Bpu10I	CCTNAGC	1 cut(s)	409
Bpu14I	TTCGAA	1 cut(s)	840
BpuEI	CTTGAG	1 cut(s)	1132
BsaHI	GRCGYC	1 cut(s)	9
BsaJI	CCNNGG	2 cut(s)	337, 761
Bsc4I	CCNNNNNNNGG	2 cut(s)	682, 1040
Bse118I	RCCGGY	2 cut(s)	724, 787
Bse1I	ACTGG	1 cut(s)	150
Bse21I	CCTNAGG	1 cut(s)	1071
BseDI	CCNNGG	2 cut(s)	337, 761
BseGI	GGATG	1 cut(s)	1030
BseLI	CCNNNNNNNGG	2 cut(s)	682, 1040
BseMII	CTCAG	6 cut(s)	90, 410, 423, 744, 1085, 1145
BseNI	ACTGG	1 cut(s)	150
BseRI	GAGGAG	1 cut(s)	883
BseXI	GCAGC	5 cut(s)	224, 659, 672, 677, 950
Bsh1236I	CGCG	1 cut(s)	334
BshFI	GGCC	2 cut(s)	930, 1003
BsiSI	CCGG	2 cut(s)	725, 788
BslFI	GGGAC	2 cut(s)	53, 369
BslI	CCNNNNNNNGG	2 cut(s)	682, 1040
BsmAI	GTCTC	1 cut(s)	399
BsmFI	GGGAC	2 cut(s)	53, 369
BsnI	GGCC	2 cut(s)	930, 1003
Bsp119I	TTCGAA	1 cut(s)	840
Bsp1407I	TGTACA	1 cut(s)	621
Bsp143I	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
Bsp19I	CCATGG	1 cut(s)	761
BspACI	CCGC	2 cut(s)	215, 824
BspANI	GGCC	2 cut(s)	930, 1003
BspCNI	CTCAG	6 cut(s)	91, 409, 422, 745, 1084, 1144
BspFNI	CGCG	1 cut(s)	334
BspHI	TCATGA	2 cut(s)	267, 981
BspLI	GGNNCC	3 cut(s)	343, 745, 770
BspMAI	CTGCAG	1 cut(s)	214
BspPI	GGATC	3 cut(s)	299, 710, 1142
BspT104I	TTCGAA	1 cut(s)	840
BsrFI	RCCGGY	2 cut(s)	724, 787
BsrGI	TGTACA	1 cut(s)	621
BsrI	ACTGG	1 cut(s)	150
BssAI	RCCGGY	2 cut(s)	724, 787
BssECI	CCNNGG	2 cut(s)	337, 761
BssMI	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
BssNAI	GTATAC	2 cut(s)	1048, 1067
BssNI	GRCGYC	1 cut(s)	9
BssT1I	CCWWGG	1 cut(s)	761
Bst1107I	GTATAC	2 cut(s)	1048, 1067
Bst4CI	ACNGT	2 cut(s)	174, 621
Bst6I	CTCTTC	2 cut(s)	318, 860
BstACI	GRCGYC	1 cut(s)	9
BstAUI	TGTACA	1 cut(s)	621
BstBI	TTCGAA	1 cut(s)	840
BstC8I	GCNNGC	2 cut(s)	670, 920
BstDEI	CTNAG	7 cut(s)	99, 396, 409, 753, 923, 1071, 1131
BstDSI	CCRYGG	1 cut(s)	761
BstEII	GGTNACC	1 cut(s)	218
BstF5I	GGATG	1 cut(s)	1030
BstFNI	CGCG	1 cut(s)	334
BstH2I	RGCGCY	2 cut(s)	447, 683
BstHHI	GCGC	4 cut(s)	336, 446, 665, 682
BstKTI	GATC	8 cut(s)	58, 307, 463, 479, 705, 741, 1030, 1150
BstMAI	GTCTC	1 cut(s)	399
BstMBI	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
BstMWI	GCNNNNNNNGC	3 cut(s)	419, 669, 730
BstNSI	RCATGY	3 cut(s)	594, 628, 955
BstPI	GGTNACC	1 cut(s)	218
BstSFI	CTRYAG	1 cut(s)	210
BstUI	CGCG	1 cut(s)	334
BstV1I	GCAGC	5 cut(s)	224, 659, 672, 677, 950
BstV2I	GAAGAC	2 cut(s)	168, 829
BstX2I	RGATCY	1 cut(s)	476
BstXI	CCANNNNNNTGG	1 cut(s)	248
BstYI	RGATCY	1 cut(s)	476
BstZ17I	GTATAC	2 cut(s)	1048, 1067
Bsu36I	CCTNAGG	1 cut(s)	1071
BsuRI	GGCC	2 cut(s)	930, 1003
BtgI	CCRYGG	1 cut(s)	761
BtgZI	GCGATG	1 cut(s)	267
BtrI	CACGTC	1 cut(s)	67
BtsCI	GGATG	1 cut(s)	1030
BtsI	GCAGTG	1 cut(s)	207
BtsIMutI	CAGTG	2 cut(s)	170, 207
Cac8I	GCNNGC	2 cut(s)	670, 920
CciI	TCATGA	2 cut(s)	267, 981
CfoI	GCGC	4 cut(s)	336, 446, 665, 682
Cfr10I	RCCGGY	2 cut(s)	724, 787
Cfr13I	GGNCC	2 cut(s)	743, 1001
Csp6I	GTAC	2 cut(s)	143, 622
CviQI	GTAC	2 cut(s)	143, 622
DdeI	CTNAG	7 cut(s)	99, 396, 409, 753, 923, 1071, 1131
DpnI	GATC	8 cut(s)	57, 306, 462, 478, 704, 740, 1029, 1149
DpnII	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
Eam1104I	CTCTTC	2 cut(s)	318, 860
EarI	CTCTTC	2 cut(s)	318, 860
Eco130I	CCWWGG	1 cut(s)	761
Eco32I	GATATC	1 cut(s)	987
Eco47I	GGWCC	1 cut(s)	743
Eco47III	AGCGCT	2 cut(s)	445, 681
Eco81I	CCTNAGG	1 cut(s)	1071
Eco91I	GGTNACC	1 cut(s)	218
EcoO109I	RGGNCCY	1 cut(s)	1001
EcoO65I	GGTNACC	1 cut(s)	218
EcoRI	GAATTC	1 cut(s)	484
EcoRV	GATATC	1 cut(s)	987
EcoT14I	CCWWGG	1 cut(s)	761
ErhI	CCWWGG	1 cut(s)	761
FalI	AAGNNNNNCTT	2 cut(s)	1154, 1186
FaqI	GGGAC	2 cut(s)	53, 369
FauI	CCCGC	2 cut(s)	208, 831
FbaI	TGATCA	1 cut(s)	1027
FblI	GTMKAC	3 cut(s)	12, 1047, 1066
Fnu4HI	GCNGC	5 cut(s)	213, 661, 666, 673, 939
FokI	GGATG	1 cut(s)	1017
Fsp4HI	GCNGC	5 cut(s)	213, 661, 666, 673, 939
FspBI	CTAG	3 cut(s)	615, 699, 1196
GlaI	GCGC	4 cut(s)	335, 445, 664, 681
GluI	GCNGC	5 cut(s)	213, 661, 666, 673, 939
GsuI	CTGGAG	1 cut(s)	105
HaeII	RGCGCY	2 cut(s)	447, 683
HaeIII	GGCC	2 cut(s)	930, 1003
HapII	CCGG	2 cut(s)	725, 788
HhaI	GCGC	4 cut(s)	336, 446, 665, 682
Hin1I	GRCGYC	1 cut(s)	9
Hin6I	GCGC	4 cut(s)	334, 444, 663, 680
HinP1I	GCGC	4 cut(s)	334, 444, 663, 680
HincII	GTYRAC	2 cut(s)	7, 13
HindII	GTYRAC	2 cut(s)	7, 13
HindIII	AAGCTT	3 cut(s)	233, 520, 920
HinfI	GANTC	2 cut(s)	101, 774
HpaII	CCGG	2 cut(s)	725, 788
HphI	GGTGA	6 cut(s)	55, 134, 230, 725, 739, 1118
Hpy166II	GTNNAC	6 cut(s)	7, 13, 64, 184, 1048, 1067
Hpy188I	TCNGA	5 cut(s)	346, 399, 743, 754, 1134
Hpy188III	TCNNGA	9 cut(s)	84, 268, 489, 556, 817, 945, 982, 1009, 1073
Hpy8I	GTNNAC	6 cut(s)	7, 13, 64, 184, 1048, 1067
Hpy99I	CGWCG	3 cut(s)	14, 17, 334
HpyAV	CCTTC	6 cut(s)	28, 274, 318, 421, 1129, 1222
HpyCH4III	ACNGT	2 cut(s)	174, 621
HpyCH4IV	ACGT	3 cut(s)	9, 66, 570
HpyCH4V	TGCA	5 cut(s)	212, 245, 292, 628, 955
HpyF10VI	GCNNNNNNNGC	3 cut(s)	419, 669, 730
HpyF3I	CTNAG	7 cut(s)	99, 396, 409, 753, 923, 1071, 1131
HpySE526I	ACGT	3 cut(s)	9, 66, 570
Hsp92I	GRCGYC	1 cut(s)	9
HspAI	GCGC	4 cut(s)	334, 444, 663, 680
Ksp22I	TGATCA	1 cut(s)	1027
Kzo9I	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
LmnI	GCTCC	1 cut(s)	441
Lsp1109I	GCAGC	5 cut(s)	224, 659, 672, 677, 950
LweI	GCATC	2 cut(s)	747, 950
MaeI	CTAG	3 cut(s)	615, 699, 1196
MaeII	ACGT	3 cut(s)	9, 66, 570
MaeIII	GTNAC	6 cut(s)	122, 218, 571, 586, 1106, 1201
MalI	GATC	8 cut(s)	57, 306, 462, 478, 704, 740, 1029, 1149
MboI	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
MboII	GAAGA	7 cut(s)	43, 173, 305, 467, 494, 829, 877
MflI	RGATCY	1 cut(s)	476
MluCI	AATT	7 cut(s)	364, 401, 484, 748, 802, 909, 1212
MlyI	GAGTC	1 cut(s)	110
MmeI	TCCRAC	2 cut(s)	224, 419
MseI	TTAA	4 cut(s)	639, 806, 858, 1240
MspA1I	CMGCKG	2 cut(s)	215, 826
MspI	CCGG	2 cut(s)	725, 788
MvnI	CGCG	1 cut(s)	334
MwoI	GCNNNNNNNGC	3 cut(s)	419, 669, 730
NcoI	CCATGG	1 cut(s)	761
NdeII	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
NlaIV	GGNNCC	3 cut(s)	343, 745, 770
NmeAIII	GCCGAG	2 cut(s)	362, 701
NmuCI	GTSAC	5 cut(s)	122, 571, 586, 1106, 1201
NspI	RCATGY	3 cut(s)	594, 628, 955
NspV	TTCGAA	1 cut(s)	840
PagI	TCATGA	2 cut(s)	267, 981
PciI	ACATGT	1 cut(s)	590
PfeI	GAWTC	1 cut(s)	774
PflFI	GACNNNGTC	1 cut(s)	833
PkrI	GCNGC	5 cut(s)	214, 662, 667, 674, 940
PleI	GAGTC	1 cut(s)	109
PpsI	GAGTC	1 cut(s)	109
PscI	ACATGT	1 cut(s)	590
PshBI	ATTAAT	1 cut(s)	639
PsiI	TTATAA	1 cut(s)	372
PspEI	GGTNACC	1 cut(s)	218
PspN4I	GGNNCC	3 cut(s)	343, 745, 770
PspPI	GGNCC	2 cut(s)	743, 1001
PstI	CTGCAG	1 cut(s)	214
PsuI	RGATCY	1 cut(s)	476
PsyI	GACNNNGTC	1 cut(s)	833
RsaI	GTAC	2 cut(s)	144, 623
RsaNI	GTAC	2 cut(s)	143, 622
SalI	GTCGAC	1 cut(s)	11
SaqAI	TTAA	4 cut(s)	639, 806, 858, 1240
SatI	GCNGC	5 cut(s)	213, 661, 666, 673, 939
Sau3AI	GATC	8 cut(s)	55, 304, 460, 476, 702, 738, 1027, 1147
Sau96I	GGNCC	2 cut(s)	743, 1001
ScaI	AGTACT	1 cut(s)	144
SchI	GAGTC	1 cut(s)	110
SfaNI	GCATC	2 cut(s)	747, 950
SfcI	CTRYAG	1 cut(s)	210
SfuI	TTCGAA	1 cut(s)	840
SgrDI	CGTCGACG	1 cut(s)	11
SinI	GGWCC	1 cut(s)	743
SmlI	CTYRAG	1 cut(s)	1111
SmoI	CTYRAG	1 cut(s)	1111
Sse9I	AATT	7 cut(s)	364, 401, 484, 748, 802, 909, 1212
SsiI	CCGC	2 cut(s)	215, 824
SspI	AATATT	1 cut(s)	228
SspMI	CTAG	3 cut(s)	615, 699, 1196
StyI	CCWWGG	1 cut(s)	761
TaaI	ACNGT	2 cut(s)	174, 621
TaiI	ACGT	3 cut(s)	12, 69, 573
TaqI	TCGA	6 cut(s)	12, 463, 818, 840, 974, 1008
TasI	AATT	7 cut(s)	364, 401, 484, 748, 802, 909, 1212
TatI	WGTACW	2 cut(s)	142, 621
TfiI	GAWTC	1 cut(s)	774
Tru1I	TTAA	4 cut(s)	639, 806, 858, 1240
Tru9I	TTAA	4 cut(s)	639, 806, 858, 1240
TscAI	CASTG	2 cut(s)	177, 214
TseFI	GTSAC	5 cut(s)	122, 571, 586, 1106, 1201
TseI	GCWGC	5 cut(s)	212, 660, 665, 672, 938
Tsp45I	GTSAC	5 cut(s)	122, 571, 586, 1106, 1201
TspDTI	ATGAA	4 cut(s)	256, 555, 772, 983
TspGWI	ACGGA	2 cut(s)	30, 318
TspRI	CASTG	2 cut(s)	177, 214
Tth111I	GACNNNGTC	1 cut(s)	833
VpaK11BI	GGWCC	1 cut(s)	743
VspI	ATTAAT	1 cut(s)	639
XapI	RAATTY	2 cut(s)	484, 1212
XceI	RCATGY	3 cut(s)	594, 628, 955
XmiI	GTMKAC	3 cut(s)	12, 1047, 1066
XspI	CTAG	3 cut(s)	615, 699, 1196
ZraI	GACGTC	1 cut(s)	10
ZrmI	AGTACT	1 cut(s)	144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.