MD10G1159300.v1.1

O-acyltransferase (WSD1-like)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0017722
Physical Location & Seq
Reverse (-)
24982866 .. 24983233
368 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1159300.v1.1.491

Sequence Viewer

Length: 231 bp
ATGGAGTTTATTAAGGATGATGATGGAGATTATTACAATGAGCCGGTGAGTCCTACTGGGCAATGCCTCAACACCTCGGTGTTATCCATGTCAGTTCTTGGTGTTTTGGAATCTGAGGTTCCAATCGATGAATCAAAGATCATGTCTTTCCTTCAGGATGTCTTCCTCCACATCAACCCACGCTTCTGCTCCATCATGAGAAGGCGAGTTTTTCGAACTTGGGACGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

77

Amino Acids

8.82

Weight (kDa)

4.54

Isoelectric Point (pI)

64.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 137
AleI CACNNNNGTG 1 cut(s) 77
ArsI GACNNNNNNTTYG 2 cut(s) 128, 160
AsuHPI GGTGA 1 cut(s) 58
AsuII TTCGAA 1 cut(s) 214
BbsI GAAGAC 1 cut(s) 154
BccI CCATC 2 cut(s) 17, 200
BmiI GGNNCC 1 cut(s) 120
BmrI ACTGGG 1 cut(s) 66
BmuI ACTGGG 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 154
Bpu14I TTCGAA 1 cut(s) 214
Bsa29I ATCGAT 1 cut(s) 126
BsaJI CCNNGG 1 cut(s) 75
Bse118I RCCGGY 1 cut(s) 43
Bse1I ACTGG 1 cut(s) 61
Bse3DI GCAATG 1 cut(s) 68
BseCI ATCGAT 1 cut(s) 126
BseDI CCNNGG 1 cut(s) 75
BseGI GGATG 2 cut(s) 22, 163
BseMI GCAATG 1 cut(s) 68
BseMII CTCAG 1 cut(s) 105
BseNI ACTGG 1 cut(s) 61
BshVI ATCGAT 1 cut(s) 126
BsiSI CCGG 1 cut(s) 44
Bsp119I TTCGAA 1 cut(s) 214
Bsp143I GATC 1 cut(s) 138
BspCNI CTCAG 1 cut(s) 106
BspDI ATCGAT 1 cut(s) 126
BspHI TCATGA 1 cut(s) 195
BspLI GGNNCC 1 cut(s) 120
BspT104I TTCGAA 1 cut(s) 214
BsrDI GCAATG 1 cut(s) 68
BsrFI RCCGGY 1 cut(s) 43
BsrI ACTGG 1 cut(s) 61
BssAI RCCGGY 1 cut(s) 43
BssECI CCNNGG 1 cut(s) 75
BssMI GATC 1 cut(s) 138
BstBI TTCGAA 1 cut(s) 214
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 2 cut(s) 22, 163
BstKTI GATC 1 cut(s) 141
BstMBI GATC 1 cut(s) 138
BstV2I GAAGAC 1 cut(s) 154
Bsu15I ATCGAT 1 cut(s) 126
BsuTUI ATCGAT 1 cut(s) 126
BtsCI GGATG 2 cut(s) 22, 163
CciI TCATGA 1 cut(s) 195
Cfr10I RCCGGY 1 cut(s) 43
ClaI ATCGAT 1 cut(s) 126
CviAII CATG 3 cut(s) 88, 142, 196
CviJI RGCY 1 cut(s) 43
CviKI_1 RGCY 1 cut(s) 43
DdeI CTNAG 1 cut(s) 114
DpnI GATC 1 cut(s) 140
DpnII GATC 1 cut(s) 138
Eco57I CTGAAG 1 cut(s) 137
FaeI CATG 3 cut(s) 91, 145, 199
FaiI YATR 4 cut(s) 89, 143, 197, 229
FatI CATG 3 cut(s) 87, 141, 195
FokI GGATG 2 cut(s) 29, 170
HapII CCGG 1 cut(s) 44
Hin1II CATG 3 cut(s) 91, 145, 199
HinfI GANTC 3 cut(s) 49, 110, 131
HpaII CCGG 1 cut(s) 44
HphI GGTGA 1 cut(s) 58
Hpy188I TCNGA 1 cut(s) 115
Hpy188III TCNNGA 2 cut(s) 155, 196
HpyAV CCTTC 2 cut(s) 161, 195
HpyCH4IV ACGT 1 cut(s) 225
HpyF3I CTNAG 1 cut(s) 114
HpySE526I ACGT 1 cut(s) 225
Hsp92II CATG 3 cut(s) 91, 145, 199
Kzo9I GATC 1 cut(s) 138
LmnI GCTCC 1 cut(s) 194
LpnPI CCDG 3 cut(s) 42, 57, 140
MaeII ACGT 1 cut(s) 225
MalI GATC 1 cut(s) 140
MboI GATC 1 cut(s) 138
MboII GAAGA 1 cut(s) 154
MlyI GAGTC 1 cut(s) 58
MnlI CCTC 4 cut(s) 77, 85, 109, 176
MseI TTAA 1 cut(s) 12
MslI CAYNNNNRTG 1 cut(s) 77
MspI CCGG 1 cut(s) 44
NdeII GATC 1 cut(s) 138
NlaIII CATG 3 cut(s) 91, 145, 199
NlaIV GGNNCC 1 cut(s) 120
NspV TTCGAA 1 cut(s) 214
OliI CACNNNNGTG 1 cut(s) 77
PagI TCATGA 1 cut(s) 195
PfeI GAWTC 2 cut(s) 110, 131
PleI GAGTC 1 cut(s) 57
PpsI GAGTC 1 cut(s) 57
PspN4I GGNNCC 1 cut(s) 120
RseI CAYNNNNRTG 1 cut(s) 77
SaqAI TTAA 1 cut(s) 12
Sau3AI GATC 1 cut(s) 138
SchI GAGTC 1 cut(s) 58
SetI ASST 3 cut(s) 77, 120, 228
SfuI TTCGAA 1 cut(s) 214
SmiMI CAYNNNNRTG 1 cut(s) 77
TaiI ACGT 1 cut(s) 228
TaqI TCGA 2 cut(s) 126, 214
TfiI GAWTC 2 cut(s) 110, 131
Tru1I TTAA 1 cut(s) 12
Tru9I TTAA 1 cut(s) 12
TspDTI ATGAA 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.