Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0017722

Physical Location & Seq

Genomic Coordinates Reverse (-)

14874415 .. 14875390

Gene Structure 976 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G140600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 534 bp

ATGGAGTATGGGGTGCATGGAAATGAGCCCGTGAGTTCTACTGGCCAATGCCTCAACAGCTCTGTGCTATCCATGTCAATTCTTTGTGTTTTGGAATTTGAGATTCCAATCAATGAATCAAAGAACTTGTCATTCCTTCAGGATGTCTTCCCCCATATCAGCCCTCGATTCTCCTCCATCATGGTTGACGTTAACGGAGAGAAGCAATGCAAGAGGGTTGAAGTGAAGCTTAGAGATCACGTCCATGTTCCTATTTTTCCATCTGGATTGTCACCTAAATCTTATGATGATCATTTTCATGACTATATTTCAAACATAATACTTGAACAATATCCAAAAGACAAACCACTATGGGAAGTTCATATAATCAAGTACCCAACAAGCAGTGCAGCTGGTAACCTAATATTCAAGCTTCACCATGCCCTTGGTGATGGCTACTCCTTTATGAGTGCTCTGCTTTCTTGTCTTCAAAGAGCTGACAATCCTCTTCCATTAACCTCTTCCTTCACGCCGGGGATCGCAACGGGGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1298 WES_acyltransf

Protein Analysis

178

Amino Acids

19.77

Weight (kDa)

5.94

Isoelectric Point (pI)

50.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017722)

Species	Orthologous Gene IDs
malus_domestica	MD10G1158900.v1.1 MD10G1159200.v1.1 MD10G1159300.v1.1 MD17G1238100.v1.1
prunus_persica	Prupe.3G140600_v2.0.a1 Prupe.3G141300_v2.0.a1
pyrus_communis	pycom10g13730 pycom10g13740 pycom17g24200
rosa_roxburghii	Rroxscaffold_1G00029720
rosa_samantha	Rh6BG155000 Rh6DG140200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	1 cut(s)	524
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	1 cut(s)	95
AcuI	CTGAAG	1 cut(s)	122
AfaI	GTAC	1 cut(s)	374
AgsI	TTSAA	5 cut(s)	221, 312, 326, 409, 470
AjiI	CACGTC	1 cut(s)	241
AluBI	AGCT	5 cut(s)	60, 229, 392, 412, 476
AluI	AGCT	5 cut(s)	60, 229, 392, 412, 476
Alw21I	GWGCWC	1 cut(s)	454
AlwI	GGATC	1 cut(s)	524
AoxI	GGCC	1 cut(s)	43
ApeKI	GCWGC	1 cut(s)	389
ApoI	RAATTY	1 cut(s)	95
ArsI	GACNNNNNNTTYG	2 cut(s)	113, 145
AsuC2I	CCSGG	1 cut(s)	513
AsuHPI	GGTGA	3 cut(s)	264, 407, 440
BalI	TGGCCA	1 cut(s)	45
BanII	GRGCYC	1 cut(s)	30
BbsI	GAAGAC	2 cut(s)	139, 458
Bbv12I	GWGCWC	1 cut(s)	454
BbvI	GCAGC	1 cut(s)	401
BccI	CCATC	3 cut(s)	185, 268, 425
BclI	TGATCA	1 cut(s)	289
BcnI	CCSGG	1 cut(s)	513
BisI	GCNGC	1 cut(s)	390
BlsI	GCNGC	1 cut(s)	391
Bme1390I	CCNGG	1 cut(s)	513
BmgBI	CACGTC	1 cut(s)	241
BmrFI	CCNGG	1 cut(s)	513
BpiI	GAAGAC	2 cut(s)	139, 458
BpuMI	CCSGG	1 cut(s)	513
BsaBI	GATNNNNATC	1 cut(s)	107
BsaJI	CCNNGG	2 cut(s)	424, 512
Bse1I	ACTGG	1 cut(s)	46
Bse3DI	GCAATG	1 cut(s)	212
Bse8I	GATNNNNATC	1 cut(s)	107
BseDI	CCNNGG	2 cut(s)	424, 512
BseGI	GGATG	1 cut(s)	148
BseJI	GATNNNNATC	1 cut(s)	107
BseMI	GCAATG	1 cut(s)	212
BseNI	ACTGG	1 cut(s)	46
BseRI	GAGGAG	1 cut(s)	163
BseXI	GCAGC	1 cut(s)	401
BsgI	GTGCAG	1 cut(s)	408
BshFI	GGCC	1 cut(s)	45
BsiHKAI	GWGCWC	1 cut(s)	454
BsiSI	CCGG	1 cut(s)	512
BsnI	GGCC	1 cut(s)	45
Bsp1286I	GDGCHC	2 cut(s)	30, 454
Bsp143I	GATC	3 cut(s)	235, 289, 516
BspANI	GGCC	1 cut(s)	45
BspHI	TCATGA	1 cut(s)	298
BspPI	GGATC	1 cut(s)	524
BsrDI	GCAATG	1 cut(s)	212
BsrI	ACTGG	1 cut(s)	46
BssECI	CCNNGG	2 cut(s)	424, 512
BssMI	GATC	3 cut(s)	235, 289, 516
BssT1I	CCWWGG	1 cut(s)	424
Bst6I	CTCTTC	2 cut(s)	492, 505
BstDEI	CTNAG	1 cut(s)	230
BstEII	GGTNACC	1 cut(s)	395
BstF5I	GGATG	1 cut(s)	148
BstKTI	GATC	3 cut(s)	238, 292, 519
BstMBI	GATC	3 cut(s)	235, 289, 516
BstMWI	GCNNNNNNNGC	1 cut(s)	57
BstPI	GGTNACC	1 cut(s)	395
BstSCI	CCNGG	1 cut(s)	511
BstV1I	GCAGC	1 cut(s)	401
BstV2I	GAAGAC	2 cut(s)	139, 458
BstXI	CCANNNNNNTGG	1 cut(s)	425
BsuRI	GGCC	1 cut(s)	45
BtrI	CACGTC	1 cut(s)	241
BtsCI	GGATG	1 cut(s)	148
BtsI	GCAGTG	1 cut(s)	391
BtsIMutI	CAGTG	1 cut(s)	391
CciI	TCATGA	1 cut(s)	298
Csp6I	GTAC	1 cut(s)	373
CviAII	CATG	6 cut(s)	17, 73, 181, 245, 299, 419
CviJI	RGCY	9 cut(s)	28, 45, 60, 162, 229, 392, 412, 435, 476
CviKI_1	RGCY	9 cut(s)	28, 45, 60, 162, 229, 392, 412, 435, 476
CviQI	GTAC	1 cut(s)	373
DdeI	CTNAG	1 cut(s)	230
DpnI	GATC	3 cut(s)	237, 291, 518
DpnII	GATC	3 cut(s)	235, 289, 516
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	2 cut(s)	492, 505
EarI	CTCTTC	2 cut(s)	492, 505
Eco130I	CCWWGG	1 cut(s)	424
Eco24I	GRGCYC	1 cut(s)	30
Eco57I	CTGAAG	1 cut(s)	122
Eco91I	GGTNACC	1 cut(s)	395
EcoO65I	GGTNACC	1 cut(s)	395
EcoT14I	CCWWGG	1 cut(s)	424
EcoT38I	GRGCYC	1 cut(s)	30
ErhI	CCWWGG	1 cut(s)	424
FaeI	CATG	6 cut(s)	20, 76, 184, 248, 302, 422
FalI	AAGNNNNNCTT	2 cut(s)	213, 245
FatI	CATG	6 cut(s)	16, 72, 180, 244, 298, 418
FbaI	TGATCA	1 cut(s)	289
Fnu4HI	GCNGC	1 cut(s)	390
FokI	GGATG	1 cut(s)	155
FriOI	GRGCYC	1 cut(s)	30
Fsp4HI	GCNGC	1 cut(s)	390
GluI	GCNGC	1 cut(s)	390
HaeIII	GGCC	1 cut(s)	45
HapII	CCGG	1 cut(s)	512
Hin1II	CATG	6 cut(s)	20, 76, 184, 248, 302, 422
HincII	GTYRAC	2 cut(s)	187, 193
HindII	GTYRAC	2 cut(s)	187, 193
HindIII	AAGCTT	2 cut(s)	227, 410
HinfI	GANTC	3 cut(s)	103, 116, 168
HpaI	GTTAAC	1 cut(s)	193
HpaII	CCGG	1 cut(s)	512
HphI	GGTGA	3 cut(s)	264, 407, 440
Hpy166II	GTNNAC	2 cut(s)	187, 193
Hpy188III	TCNNGA	3 cut(s)	140, 264, 299
Hpy8I	GTNNAC	2 cut(s)	187, 193
HpyAV	CCTTC	2 cut(s)	146, 514
HpyCH4IV	ACGT	2 cut(s)	189, 240
HpyCH4V	TGCA	3 cut(s)	16, 210, 389
HpyF10VI	GCNNNNNNNGC	1 cut(s)	57
HpyF3I	CTNAG	1 cut(s)	230
HpySE526I	ACGT	2 cut(s)	189, 240
Hsp92II	CATG	6 cut(s)	20, 76, 184, 248, 302, 422
Ksp22I	TGATCA	1 cut(s)	289
KspAI	GTTAAC	1 cut(s)	193
Kzo9I	GATC	3 cut(s)	235, 289, 516
LpnPI	CCDG	5 cut(s)	27, 125, 249, 378, 525
Lsp1109I	GCAGC	1 cut(s)	401
MaeII	ACGT	2 cut(s)	189, 240
MaeIII	GTNAC	2 cut(s)	270, 395
MalI	GATC	3 cut(s)	237, 291, 518
MboI	GATC	3 cut(s)	235, 289, 516
MboII	GAAGA	4 cut(s)	139, 458, 479, 492
MhlI	GDGCHC	2 cut(s)	30, 454
MlsI	TGGCCA	1 cut(s)	45
MluCI	AATT	2 cut(s)	78, 95
MluNI	TGGCCA	1 cut(s)	45
MnlI	CCTC	6 cut(s)	62, 174, 184, 207, 495, 508
Mox20I	TGGCCA	1 cut(s)	45
MscI	TGGCCA	1 cut(s)	45
MseI	TTAA	2 cut(s)	192, 494
MslI	CAYNNNNRTG	3 cut(s)	21, 243, 297
Msp20I	TGGCCA	1 cut(s)	45
MspA1I	CMGCKG	1 cut(s)	392
MspI	CCGG	1 cut(s)	512
MspR9I	CCNGG	1 cut(s)	513
MwoI	GCNNNNNNNGC	1 cut(s)	57
NciI	CCSGG	1 cut(s)	513
NdeII	GATC	3 cut(s)	235, 289, 516
NlaIII	CATG	6 cut(s)	20, 76, 184, 248, 302, 422
NmuCI	GTSAC	1 cut(s)	270
PagI	TCATGA	1 cut(s)	298
PfeI	GAWTC	3 cut(s)	103, 116, 168
PkrI	GCNGC	1 cut(s)	391
PspEI	GGTNACC	1 cut(s)	395
PvuII	CAGCTG	1 cut(s)	392
RsaI	GTAC	1 cut(s)	374
RsaNI	GTAC	1 cut(s)	373
RseI	CAYNNNNRTG	3 cut(s)	21, 243, 297
SaqAI	TTAA	2 cut(s)	192, 494
SatI	GCNGC	1 cut(s)	390
Sau3AI	GATC	3 cut(s)	235, 289, 516
ScrFI	CCNGG	1 cut(s)	513
SduI	GDGCHC	2 cut(s)	30, 454
SmiMI	CAYNNNNRTG	3 cut(s)	21, 243, 297
Sse9I	AATT	2 cut(s)	78, 95
SspI	AATATT	1 cut(s)	405
StyD4I	CCNGG	1 cut(s)	511
StyI	CCWWGG	1 cut(s)	424
TaiI	ACGT	2 cut(s)	192, 243
TaqI	TCGA	1 cut(s)	166
TasI	AATT	2 cut(s)	78, 95
TfiI	GAWTC	3 cut(s)	103, 116, 168
Tru1I	TTAA	2 cut(s)	192, 494
Tru9I	TTAA	2 cut(s)	192, 494
TscAI	CASTG	1 cut(s)	391
TseFI	GTSAC	1 cut(s)	270
TseI	GCWGC	1 cut(s)	389
Tsp45I	GTSAC	1 cut(s)	270
TspDTI	ATGAA	3 cut(s)	129, 287, 350
TspGWI	ACGGA	1 cut(s)	210
TspRI	CASTG	1 cut(s)	391
XapI	RAATTY	1 cut(s)	95

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.