MD10G1215400.v1.1

Anthocyanidin 5,3-O-glucosyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0004234
Physical Location & Seq
Forward (+)
31394113 .. 31394641
529 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1215400.v1.1.491

Sequence Viewer

Length: 420 bp
ATGTTGCCACGGAGCAAAAGGGTTGGAGACAAGTGGGATGGGAAGAGGTTTCTGTGGGTGGTGAAGAAGCCGCCGGTAGATGTGAAAACAAAGCAGCTTCATGGAGCTGACAACGACTTTGATTTGGAGGGTCTGTTGCCTGAAGAGTTCTTGGACAGGACCAATGACAGGGGCATGGTGGTGAAGTCATGGGCTCCGCAAGCAGCGGTGTTGAAGAAGGAATCGGTGTGTGGGTTTGTGACACATTGTAGGCCGAACTCAGTGCTCGAAGCGGTGGTTTCAGGCGTACCATTGATTGCTTGGCCACTGTACGCGGAGCAGCATCTGAATAGGAATAATCTGGTGAAGGTCATGGAAATAGCGACCAGGGTGGTGGAGAGAAAGGAAGATGGTGTCAGGAATGTCAGTACTACAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

140

Amino Acids

15.77

Weight (kDa)

9.39

Isoelectric Point (pI)

32.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 55 - 117 6.5e-14 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 314
AciI CCGC 5 cut(s) 71, 197, 206, 272, 314
AcoI YGGCCR 1 cut(s) 302
AcuI CTGAAG 1 cut(s) 162
AfaI GTAC 3 cut(s) 288, 311, 409
AfiI CCNNNNNNNGG 1 cut(s) 168
AgsI TTSAA 1 cut(s) 214
AjnI CCWGG 1 cut(s) 365
AluBI AGCT 2 cut(s) 97, 107
AluI AGCT 2 cut(s) 97, 107
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 1 cut(s) 21
AlwNI CAGNNNCTG 1 cut(s) 325
AoxI GGCC 2 cut(s) 251, 302
ApeKI GCWGC 3 cut(s) 94, 203, 319
ArsI GACNNNNNNTTYG 2 cut(s) 101, 133
AspS9I GGNCC 1 cut(s) 159
AsuHPI GGTGA 3 cut(s) 73, 193, 355
AvaII GGWCC 1 cut(s) 159
BalI TGGCCA 1 cut(s) 304
BanII GRGCYC 1 cut(s) 196
Bbv12I GWGCWC 1 cut(s) 267
BbvI GCAGC 3 cut(s) 106, 215, 331
BccI CCATC 2 cut(s) 32, 383
BcgI CGANNNNNNTGC 2 cut(s) 244, 278
BciT130I CCWGG 1 cut(s) 367
BcoDI GTCTC 1 cut(s) 21
BisI GCNGC 4 cut(s) 71, 95, 204, 320
BlsI GCNGC 4 cut(s) 72, 96, 205, 321
BmcAI AGTACT 1 cut(s) 409
Bme1390I CCNGG 1 cut(s) 367
Bme18I GGWCC 1 cut(s) 159
BmgT120I GGNCC 1 cut(s) 159
BmiI GGNNCC 1 cut(s) 195
BmrFI CCNGG 1 cut(s) 367
BmsI GCATC 1 cut(s) 331
BsaJI CCNNGG 2 cut(s) 8, 366
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 1 cut(s) 168
Bse118I RCCGGY 1 cut(s) 73
BseBI CCWGG 1 cut(s) 367
BseDI CCNNGG 2 cut(s) 8, 366
BseGI GGATG 1 cut(s) 43
BseLI CCNNNNNNNGG 1 cut(s) 168
BseMII CTCAG 1 cut(s) 273
BseXI GCAGC 3 cut(s) 106, 215, 331
Bsh1236I CGCG 1 cut(s) 314
BshFI GGCC 2 cut(s) 253, 304
BsiHKAI GWGCWC 1 cut(s) 267
BsiSI CCGG 1 cut(s) 74
BslI CCNNNNNNNGG 1 cut(s) 168
BsmAI GTCTC 1 cut(s) 21
BsnI GGCC 2 cut(s) 253, 304
Bsp1286I GDGCHC 2 cut(s) 196, 267
BspACI CCGC 5 cut(s) 71, 197, 206, 272, 314
BspANI GGCC 2 cut(s) 253, 304
BspCNI CTCAG 1 cut(s) 272
BspFNI CGCG 1 cut(s) 314
BspLI GGNNCC 1 cut(s) 195
BsrFI RCCGGY 1 cut(s) 73
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 2 cut(s) 8, 366
Bst2UI CCWGG 1 cut(s) 367
Bst4CI ACNGT 1 cut(s) 309
Bst6I CTCTTC 2 cut(s) 38, 138
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 1 cut(s) 259
BstDSI CCRYGG 1 cut(s) 8
BstF5I GGATG 1 cut(s) 43
BstFNI CGCG 1 cut(s) 314
BstMAI GTCTC 1 cut(s) 21
BstMWI GCNNNNNNNGC 1 cut(s) 200
BstNI CCWGG 1 cut(s) 367
BstSCI CCNGG 1 cut(s) 365
BstUI CGCG 1 cut(s) 314
BstV1I GCAGC 3 cut(s) 106, 215, 331
BstXI CCANNNNNNTGG 1 cut(s) 373
BsuRI GGCC 2 cut(s) 253, 304
BtgI CCRYGG 1 cut(s) 8
BtsCI GGATG 1 cut(s) 43
BtsIMutI CAGTG 2 cut(s) 267, 305
Cac8I GCNNGC 1 cut(s) 201
CaiI CAGNNNCTG 1 cut(s) 325
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 159
Csp6I GTAC 3 cut(s) 287, 310, 408
CviAII CATG 4 cut(s) 101, 175, 189, 352
CviJI RGCY 6 cut(s) 70, 97, 107, 194, 253, 304
CviKI_1 RGCY 6 cut(s) 70, 97, 107, 194, 253, 304
CviQI GTAC 3 cut(s) 287, 310, 408
DdeI CTNAG 1 cut(s) 259
EaeI YGGCCR 1 cut(s) 302
Eam1104I CTCTTC 2 cut(s) 38, 138
EarI CTCTTC 2 cut(s) 38, 138
Eco24I GRGCYC 1 cut(s) 196
Eco47I GGWCC 1 cut(s) 159
Eco57I CTGAAG 1 cut(s) 162
EcoRII CCWGG 1 cut(s) 365
EcoT38I GRGCYC 1 cut(s) 196
FaeI CATG 4 cut(s) 104, 178, 192, 355
FaiI YATR 4 cut(s) 102, 176, 190, 353
FatI CATG 4 cut(s) 100, 174, 188, 351
Fnu4HI GCNGC 4 cut(s) 71, 95, 204, 320
FokI GGATG 1 cut(s) 50
FriOI GRGCYC 1 cut(s) 196
Fsp4HI GCNGC 4 cut(s) 71, 95, 204, 320
GluI GCNGC 4 cut(s) 71, 95, 204, 320
HaeIII GGCC 2 cut(s) 253, 304
HapII CCGG 1 cut(s) 74
Hin1II CATG 4 cut(s) 104, 178, 192, 355
HinfI GANTC 1 cut(s) 221
HpaII CCGG 1 cut(s) 74
HphI GGTGA 3 cut(s) 73, 193, 355
Hpy188I TCNGA 1 cut(s) 327
Hpy188III TCNNGA 1 cut(s) 397
HpyAV CCTTC 2 cut(s) 211, 340
HpyCH4III ACNGT 1 cut(s) 309
HpyF10VI GCNNNNNNNGC 1 cut(s) 200
HpyF3I CTNAG 1 cut(s) 259
Hsp92II CATG 4 cut(s) 104, 178, 192, 355
LmnI GCTCC 4 cut(s) 12, 104, 199, 316
LpnPI CCDG 9 cut(s) 87, 142, 153, 154, 267, 326, 352, 379, 382
Lsp1109I GCAGC 3 cut(s) 106, 215, 331
LweI GCATC 1 cut(s) 331
MaeIII GTNAC 1 cut(s) 238
MboII GAAGA 5 cut(s) 55, 76, 155, 226, 398
MhlI GDGCHC 2 cut(s) 196, 267
MlsI TGGCCA 1 cut(s) 304
MluNI TGGCCA 1 cut(s) 304
MmeI TCCRAC 1 cut(s) 4
MnlI CCTC 2 cut(s) 39, 121
Mox20I TGGCCA 1 cut(s) 304
MscI TGGCCA 1 cut(s) 304
MslI CAYNNNNRTG 1 cut(s) 179
Msp20I TGGCCA 1 cut(s) 304
MspA1I CMGCKG 1 cut(s) 206
MspI CCGG 1 cut(s) 74
MspR9I CCNGG 1 cut(s) 367
MvaI CCWGG 1 cut(s) 367
MvnI CGCG 1 cut(s) 314
MwoI GCNNNNNNNGC 1 cut(s) 200
NlaIII CATG 4 cut(s) 104, 178, 192, 355
NlaIV GGNNCC 1 cut(s) 195
NmuCI GTSAC 1 cut(s) 238
PfeI GAWTC 1 cut(s) 221
PkrI GCNGC 4 cut(s) 72, 96, 205, 321
Psp6I CCWGG 1 cut(s) 365
PspGI CCWGG 1 cut(s) 365
PspN4I GGNNCC 1 cut(s) 195
PspPI GGNCC 1 cut(s) 159
PstNI CAGNNNCTG 1 cut(s) 325
RsaI GTAC 3 cut(s) 288, 311, 409
RsaNI GTAC 3 cut(s) 287, 310, 408
RseI CAYNNNNRTG 1 cut(s) 179
SatI GCNGC 4 cut(s) 71, 95, 204, 320
Sau96I GGNCC 1 cut(s) 159
ScaI AGTACT 1 cut(s) 409
ScrFI CCNGG 1 cut(s) 367
SduI GDGCHC 2 cut(s) 196, 267
SetI ASST 4 cut(s) 50, 99, 109, 351
SfaNI GCATC 1 cut(s) 331
SinI GGWCC 1 cut(s) 159
SmiMI CAYNNNNRTG 1 cut(s) 179
SsiI CCGC 5 cut(s) 71, 197, 206, 272, 314
StyD4I CCNGG 1 cut(s) 365
TaaI ACNGT 1 cut(s) 309
TaqI TCGA 1 cut(s) 267
TatI WGTACW 1 cut(s) 407
TauI GCSGC 1 cut(s) 73
TfiI GAWTC 1 cut(s) 221
TscAI CASTG 2 cut(s) 267, 312
TseFI GTSAC 1 cut(s) 238
TseI GCWGC 3 cut(s) 94, 203, 319
Tsp45I GTSAC 1 cut(s) 238
TspDTI ATGAA 1 cut(s) 89
TspGWI ACGGA 1 cut(s) 25
TspRI CASTG 2 cut(s) 267, 312
VpaK11BI GGWCC 1 cut(s) 159
XcmI CCANNNNNNNNNTGG 1 cut(s) 297
ZrmI AGTACT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.