Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004234

Physical Location & Seq

Genomic Coordinates Reverse (-)

44748788 .. 44750070

Gene Structure 1283 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G547700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1188 bp

ATCCCCGCCTACATCCAGCGCATCTCCCGAGCCTATCCTTCCATCTCCTTCCACCAATTTCCTCGCGTTGAAAATAAAATTACATTAATTCCCATCAGTGTCGTGGTCATAGCGTCTGATTTCATTCGCCGGAATGATCCTTATGTCTGCCTTGCCCTCCAAGAGATCTCTAAATCTTCAGCCATTCGTGCTTTTATCATCGACATCTTCTGCTCCTCTGCGCTGCCAATGGTGAAGGAACTCGGCATTCCCACCTACGACTTTTACACCTCTGGAGCTGCAGCTTTTGCGGTTTTTCTGTACTTTCCGAAAATCGGGGAACAAACCACCAATAGCTTCAAGGATTTGACCGAGACTGTTTTAGAGTTTCCCGGGTTGAAGTCCCCCCTGAATGCCCCTCACATGCCTGAGCCAATGCTTGACCGAGATGACCCTGCTTATTGGGACATGGTCTACTTCTGCACCCACCTTCCCAAATCTAATGGGATCATAGCCAACACGTTTGAAGAGCTCGAGCCTCCTGCAGTCCTCAAAGCCATTGTTGGAGGTCTTTGTGTTCCTAATGCTCCCACTCCTCATGTCTACTACATCGGGCTATTGATTTCTGAAGAAAAAGAATTTGGGGATTCTGCAGATGCAGAAGATTGTTTGTCATGGCTTGATCAGCAGCCAAGTAGAAGTGTGGTGTTTCTCTGTTTTGGAAGCAGAGGATCATTCTCAGGGGCTCAATTGAAAGAGATAACAGATGGGTTGGAAAAGAGTGGACAGAGGTTTTTGTGGGTGATGAAGAAGCTTCCCCTTGATGAGAAAACCAAGCAGGTCCAAGGAGTACATGACTTTGAGTTGGAAGATGAAGGCTTGGTGGTGAAGTCATGGGCGCCGCAAGTGGCGGTGTTGAAGAAGGAATCCGTGGGCAGGTTCGTGAGGCATTGTAGGTGGAACTCGGTGCTTGAAGCGGTGATTGCCGGCGTGCCGATGGTGGCATGGTCACTCTATGCAAAGCAGCATTTGAATAAAAGTATTTTGGTGAAGGACATGGAAATGGCAATTGCTGTGAAGCAGAGAGAGGAAGATGGGGAAGAGCTTAGAGAAAGGAGCAGGAAAATGGGAGAGATAGCTTTGGCGGCTTGGAGTGAGTCTGGTTCATCCACTAGAAACTTCGTTAACTTTGTTAATAGCATTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

396

Amino Acids

44.22

Weight (kDa)

5.54

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004234)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g31920
malus_domestica	MD08G1218900.v1.1 MD08G1219100.v1.1 MD10G1215400.v1.1 MD10G1215800.v1.1 MD10G1216100.v1.1 MD15G1407300.v1.1 MD15G1407600.v1.1
prunus_persica	Prupe.1G547500_v2.0.a1 Prupe.1G547700_v2.0.a1 Prupe.1G547800_v2.0.a1 Prupe.1G554300_v2.0.a1 Prupe.1G554400_v2.0.a1
pyrus_communis	pycom08g18960 pycom08g18970 pycom15g36350
rosa_chinensis	RchiOBHm_Chr7g0227931 RchiOBHm_Chr7g0227951
rosa_laevigata	RLG00000001603
rosa_multiflora	Rmu_sc0005670.1_g000012 Rmu_ssc0000011.1_g000008
rosa_roxburghii	Rroxscaffold_3G00231690
rosa_rugosa	Rorug07G0244600 Rorug07G0244900 Rorug07G0244900
rosa_samantha	Rh7AG398200 Rh7AG398500 Rh7BG379500 Rh7CG416200 Rh7DG393700 Rh7DG394100
rosa_wichuraiana	Rw7G033120 Rw7G033130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	808, 906
AccB1I	GGYRCC	1 cut(s)	877
AccI	GTMKAC	2 cut(s)	453, 582
AccII	CGCG	1 cut(s)	66
AciI	CCGC	6 cut(s)	6, 290, 881, 890, 956, 1124
AclWI	GGATC	3 cut(s)	131, 494, 718
AcsI	RAATTY	1 cut(s)	617
AcuI	CTGAAG	2 cut(s)	162, 627
AcyI	GRCGYC	1 cut(s)	878
AfaI	GTAC	2 cut(s)	302, 831
AfiI	CCNNNNNNNGG	2 cut(s)	314, 915
AflIII	ACRYGT	1 cut(s)	498
AgsI	TTSAA	8 cut(s)	71, 340, 379, 506, 733, 898, 953, 1012
AjuI	GAANNNNNNNTTGG	2 cut(s)	603, 635
AluBI	AGCT	7 cut(s)	278, 284, 336, 511, 793, 1084, 1118
AluI	AGCT	7 cut(s)	278, 284, 336, 511, 793, 1084, 1118
Alw21I	GWGCWC	1 cut(s)	513
Alw26I	GTCTC	1 cut(s)	347
AlwI	GGATC	3 cut(s)	131, 494, 718
Ama87I	CYCGRG	3 cut(s)	27, 371, 512
ApeKI	GCWGC	5 cut(s)	223, 278, 281, 667, 1003
ApoI	RAATTY	1 cut(s)	617
AseI	ATTAAT	1 cut(s)	86
AspLEI	GCGC	3 cut(s)	21, 223, 880
AspS9I	GGNCC	1 cut(s)	820
AsuC2I	CCSGG	2 cut(s)	372, 373
AsuHPI	GGTGA	5 cut(s)	244, 793, 877, 970, 1039
AvaI	CYCGRG	3 cut(s)	27, 371, 512
AvaII	GGWCC	1 cut(s)	820
BanI	GGYRCC	1 cut(s)	877
BanII	GRGCYC	2 cut(s)	513, 727
Bbv12I	GWGCWC	1 cut(s)	513
BbvI	GCAGC	5 cut(s)	210, 265, 293, 679, 1015
BccI	CCATC	5 cut(s)	50, 101, 740, 970, 1067
BcgI	CGANNNNNNTGC	2 cut(s)	503, 537
BclI	TGATCA	1 cut(s)	661
BcnI	CCSGG	2 cut(s)	372, 373
BcoDI	GTCTC	1 cut(s)	347
BfaI	CTAG	1 cut(s)	1152
BfmI	CTRYAG	3 cut(s)	279, 522, 630
BfoI	RGCGCY	1 cut(s)	881
BfuAI	ACCTGC	2 cut(s)	808, 906
BglII	AGATCT	1 cut(s)	165
BisI	GCNGC	7 cut(s)	224, 279, 282, 668, 881, 1004, 1125
BlsI	GCNGC	7 cut(s)	225, 280, 283, 669, 882, 1005, 1126
Bme1390I	CCNGG	2 cut(s)	372, 373
Bme18I	GGWCC	1 cut(s)	820
BmeT110I	CYCGRG	3 cut(s)	27, 371, 512
BmgT120I	GGNCC	1 cut(s)	820
BmiI	GGNNCC	1 cut(s)	879
BmrFI	CCNGG	2 cut(s)	372, 373
BmsI	GCATC	2 cut(s)	30, 625
BpmI	CTGGAG	1 cut(s)	294
Bpu10I	CCTNAGC	1 cut(s)	408
BpuMI	CCSGG	2 cut(s)	372, 373
BsaHI	GRCGYC	1 cut(s)	878
BsaJI	CCNNGG	3 cut(s)	371, 823, 909
Bsc4I	CCNNNNNNNGG	2 cut(s)	314, 915
Bse118I	RCCGGY	1 cut(s)	965
Bse3DI	GCAATG	1 cut(s)	1179
BseDI	CCNNGG	3 cut(s)	371, 823, 909
BseGI	GGATG	2 cut(s)	12, 1145
BseLI	CCNNNNNNNGG	2 cut(s)	314, 915
BseMI	GCAATG	1 cut(s)	1179
BseMII	CTCAG	2 cut(s)	399, 732
BseRI	GAGGAG	2 cut(s)	205, 564
BseXI	GCAGC	5 cut(s)	210, 265, 293, 679, 1015
BsgI	GTGCAG	1 cut(s)	445
Bsh1236I	CGCG	1 cut(s)	66
BshNI	GGYRCC	1 cut(s)	877
BsiHKAI	GWGCWC	1 cut(s)	513
BsiHKCI	CYCGRG	3 cut(s)	27, 371, 512
BsiSI	CCGG	3 cut(s)	130, 372, 966
BslFI	GGGAC	2 cut(s)	367, 458
BslI	CCNNNNNNNGG	2 cut(s)	314, 915
BsmAI	GTCTC	1 cut(s)	347
BsmFI	GGGAC	2 cut(s)	367, 458
BsmI	GAATGC	2 cut(s)	246, 397
BsoBI	CYCGRG	3 cut(s)	27, 371, 512
Bsp1286I	GDGCHC	2 cut(s)	513, 727
Bsp143I	GATC	5 cut(s)	136, 165, 486, 661, 710
BspACI	CCGC	6 cut(s)	6, 290, 881, 890, 956, 1124
BspCNI	CTCAG	2 cut(s)	400, 731
BspFNI	CGCG	1 cut(s)	66
BspLI	GGNNCC	1 cut(s)	879
BspMAI	CTGCAG	3 cut(s)	283, 526, 634
BspMI	ACCTGC	2 cut(s)	808, 906
BspPI	GGATC	3 cut(s)	131, 494, 718
BspQI	GCTCTTC	2 cut(s)	501, 1074
BspT107I	GGYRCC	1 cut(s)	877
BsrDI	GCAATG	1 cut(s)	1179
BsrFI	RCCGGY	1 cut(s)	965
BssAI	RCCGGY	1 cut(s)	965
BssECI	CCNNGG	3 cut(s)	371, 823, 909
BssMI	GATC	5 cut(s)	136, 165, 486, 661, 710
BssNI	GRCGYC	1 cut(s)	878
BssT1I	CCWWGG	1 cut(s)	823
Bst4CI	ACNGT	1 cut(s)	358
Bst6I	CTCTTC	2 cut(s)	501, 1074
BstACI	GRCGYC	1 cut(s)	878
BstAPI	GCANNNNNTGC	1 cut(s)	287
BstC8I	GCNNGC	2 cut(s)	967, 971
BstDEI	CTNAG	3 cut(s)	408, 718, 1085
BstDSI	CCRYGG	1 cut(s)	909
BstF5I	GGATG	2 cut(s)	12, 1145
BstFNI	CGCG	1 cut(s)	66
BstH2I	RGCGCY	1 cut(s)	881
BstHHI	GCGC	3 cut(s)	21, 223, 880
BstKTI	GATC	5 cut(s)	139, 168, 489, 664, 713
BstMAI	GTCTC	1 cut(s)	347
BstMBI	GATC	5 cut(s)	136, 165, 486, 661, 710
BstMWI	GCNNNNNNNGC	5 cut(s)	188, 287, 664, 962, 1124
BstNSI	RCATGY	1 cut(s)	406
BstSCI	CCNGG	2 cut(s)	370, 371
BstSFI	CTRYAG	3 cut(s)	279, 522, 630
BstUI	CGCG	1 cut(s)	66
BstV1I	GCAGC	5 cut(s)	210, 265, 293, 679, 1015
BstX2I	RGATCY	1 cut(s)	165
BstYI	RGATCY	1 cut(s)	165
BtgI	CCRYGG	1 cut(s)	909
BtsCI	GGATG	2 cut(s)	12, 1145
BtsIMutI	CAGTG	1 cut(s)	103
BveI	ACCTGC	2 cut(s)	808, 906
Cac8I	GCNNGC	2 cut(s)	967, 971
CfoI	GCGC	3 cut(s)	21, 223, 880
Cfr10I	RCCGGY	1 cut(s)	965
Cfr13I	GGNCC	1 cut(s)	820
Cfr9I	CCCGGG	1 cut(s)	371
CseI	GACGC	1 cut(s)	102
Csp6I	GTAC	2 cut(s)	301, 830
CviAII	CATG	8 cut(s)	403, 448, 578, 654, 833, 873, 984, 1036
CviQI	GTAC	2 cut(s)	301, 830
DdeI	CTNAG	3 cut(s)	408, 718, 1085
DinI	GGCGCC	1 cut(s)	879
DpnI	GATC	5 cut(s)	138, 167, 488, 663, 712
DpnII	GATC	5 cut(s)	136, 165, 486, 661, 710
Eam1104I	CTCTTC	2 cut(s)	501, 1074
EarI	CTCTTC	2 cut(s)	501, 1074
Ecl136II	GAGCTC	1 cut(s)	511
Eco130I	CCWWGG	1 cut(s)	823
Eco24I	GRGCYC	2 cut(s)	513, 727
Eco47I	GGWCC	1 cut(s)	820
Eco53kI	GAGCTC	1 cut(s)	511
Eco57I	CTGAAG	2 cut(s)	162, 627
Eco88I	CYCGRG	3 cut(s)	27, 371, 512
EcoICRI	GAGCTC	1 cut(s)	511
EcoT14I	CCWWGG	1 cut(s)	823
EcoT38I	GRGCYC	2 cut(s)	513, 727
EgeI	GGCGCC	1 cut(s)	879
EheI	GGCGCC	1 cut(s)	879
ErhI	CCWWGG	1 cut(s)	823
FaeI	CATG	8 cut(s)	406, 451, 581, 657, 836, 876, 987, 1039
FaqI	GGGAC	2 cut(s)	367, 458
FatI	CATG	8 cut(s)	402, 447, 577, 653, 832, 872, 983, 1035
FauI	CCCGC	1 cut(s)	13
FbaI	TGATCA	1 cut(s)	661
FblI	GTMKAC	2 cut(s)	453, 582
Fnu4HI	GCNGC	7 cut(s)	224, 279, 282, 668, 881, 1004, 1125
FokI	GGATG	1 cut(s)	1132
FriOI	GRGCYC	2 cut(s)	513, 727
Fsp4HI	GCNGC	7 cut(s)	224, 279, 282, 668, 881, 1004, 1125
FspBI	CTAG	1 cut(s)	1152
GlaI	GCGC	3 cut(s)	20, 222, 879
GluI	GCNGC	7 cut(s)	224, 279, 282, 668, 881, 1004, 1125
GsuI	CTGGAG	1 cut(s)	294
HaeII	RGCGCY	1 cut(s)	881
HapII	CCGG	3 cut(s)	130, 372, 966
HgaI	GACGC	1 cut(s)	102
HhaI	GCGC	3 cut(s)	21, 223, 880
Hin1I	GRCGYC	1 cut(s)	878
Hin1II	CATG	8 cut(s)	406, 451, 581, 657, 836, 876, 987, 1039
Hin6I	GCGC	3 cut(s)	19, 221, 878
HinP1I	GCGC	3 cut(s)	19, 221, 878
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HindIII	AAGCTT	1 cut(s)	791
HinfI	GANTC	3 cut(s)	626, 905, 1136
HpaI	GTTAAC	1 cut(s)	1165
HpaII	CCGG	3 cut(s)	130, 372, 966
HphI	GGTGA	5 cut(s)	244, 793, 877, 970, 1039
Hpy166II	GTNNAC	4 cut(s)	454, 583, 764, 1165
Hpy188I	TCNGA	3 cut(s)	118, 309, 607
Hpy188III	TCNNGA	3 cut(s)	27, 273, 922
Hpy8I	GTNNAC	4 cut(s)	454, 583, 764, 1165
HpyAV	CCTTC	7 cut(s)	48, 58, 229, 479, 848, 895, 1024
HpyCH4III	ACNGT	1 cut(s)	358
HpyCH4IV	ACGT	1 cut(s)	500
HpyCH4V	TGCA	7 cut(s)	281, 462, 524, 632, 638, 998, 1184
HpyF10VI	GCNNNNNNNGC	5 cut(s)	188, 287, 664, 962, 1124
HpyF3I	CTNAG	3 cut(s)	408, 718, 1085
HpySE526I	ACGT	1 cut(s)	500
Hsp92I	GRCGYC	1 cut(s)	878
Hsp92II	CATG	8 cut(s)	406, 451, 581, 657, 836, 876, 987, 1039
HspAI	GCGC	3 cut(s)	19, 221, 878
KasI	GGCGCC	1 cut(s)	877
KroI	GCCGGC	1 cut(s)	965
KroNI	GCCGGC	1 cut(s)	967
Ksp22I	TGATCA	1 cut(s)	661
KspAI	GTTAAC	1 cut(s)	1165
Kzo9I	GATC	5 cut(s)	136, 165, 486, 661, 710
LguI	GCTCTTC	2 cut(s)	501, 1074
LmnI	GCTCC	4 cut(s)	218, 275, 571, 1095
Lsp1109I	GCAGC	5 cut(s)	210, 265, 293, 679, 1015
LweI	GCATC	2 cut(s)	30, 625
MaeI	CTAG	1 cut(s)	1152
MaeII	ACGT	1 cut(s)	500
MaeIII	GTNAC	1 cut(s)	987
MalI	GATC	5 cut(s)	138, 167, 488, 663, 712
MboI	GATC	5 cut(s)	136, 165, 486, 661, 710
MfeI	CAATTG	2 cut(s)	728, 1047
MflI	RGATCY	1 cut(s)	165
MhlI	GDGCHC	2 cut(s)	513, 727
MluCI	AATT	6 cut(s)	56, 78, 87, 617, 728, 1047
Mly113I	GGCGCC	1 cut(s)	878
MlyI	GAGTC	1 cut(s)	1145
MmeI	TCCRAC	3 cut(s)	523, 732, 825
MroNI	GCCGGC	1 cut(s)	965
MseI	TTAA	3 cut(s)	86, 1164, 1173
MslI	CAYNNNNRTG	1 cut(s)	1040
MspI	CCGG	3 cut(s)	130, 372, 966
MspR9I	CCNGG	2 cut(s)	372, 373
MunI	CAATTG	2 cut(s)	728, 1047
Mva1269I	GAATGC	2 cut(s)	246, 397
MvnI	CGCG	1 cut(s)	66
MwoI	GCNNNNNNNGC	5 cut(s)	188, 287, 664, 962, 1124
NaeI	GCCGGC	1 cut(s)	967
NarI	GGCGCC	1 cut(s)	878
NciI	CCSGG	2 cut(s)	372, 373
NdeII	GATC	5 cut(s)	136, 165, 486, 661, 710
NgoMIV	GCCGGC	1 cut(s)	965
NlaIII	CATG	8 cut(s)	406, 451, 581, 657, 836, 876, 987, 1039
NlaIV	GGNNCC	1 cut(s)	879
NmeAIII	GCCGAG	1 cut(s)	222
NmuCI	GTSAC	1 cut(s)	987
NspI	RCATGY	1 cut(s)	406
PaeR7I	CTCGAG	1 cut(s)	512
PciSI	GCTCTTC	2 cut(s)	501, 1074
PctI	GAATGC	2 cut(s)	246, 397
PdiI	GCCGGC	1 cut(s)	967
PfeI	GAWTC	2 cut(s)	626, 905
PflFI	GACNNNGTC	1 cut(s)	449
PkrI	GCNGC	7 cut(s)	225, 280, 283, 669, 882, 1005, 1126
PleI	GAGTC	1 cut(s)	1144
PluTI	GGCGCC	1 cut(s)	881
PpsI	GAGTC	1 cut(s)	1144
PshBI	ATTAAT	1 cut(s)	86
Psp124BI	GAGCTC	1 cut(s)	513
PspN4I	GGNNCC	1 cut(s)	879
PspPI	GGNCC	1 cut(s)	820
PspXI	VCTCGAGB	1 cut(s)	512
PstI	CTGCAG	3 cut(s)	283, 526, 634
PsuI	RGATCY	1 cut(s)	165
PsyI	GACNNNGTC	1 cut(s)	449
RsaI	GTAC	2 cut(s)	302, 831
RsaNI	GTAC	2 cut(s)	301, 830
RseI	CAYNNNNRTG	1 cut(s)	1040
SacI	GAGCTC	1 cut(s)	513
SapI	GCTCTTC	2 cut(s)	501, 1074
SaqAI	TTAA	3 cut(s)	86, 1164, 1173
SatI	GCNGC	7 cut(s)	224, 279, 282, 668, 881, 1004, 1125
Sau3AI	GATC	5 cut(s)	136, 165, 486, 661, 710
Sau96I	GGNCC	1 cut(s)	820
SchI	GAGTC	1 cut(s)	1145
ScrFI	CCNGG	2 cut(s)	372, 373
SduI	GDGCHC	2 cut(s)	513, 727
SfaNI	GCATC	2 cut(s)	30, 625
SfcI	CTRYAG	3 cut(s)	279, 522, 630
SfoI	GGCGCC	1 cut(s)	879
Sfr274I	CTCGAG	1 cut(s)	512
SinI	GGWCC	1 cut(s)	820
SlaI	CTCGAG	1 cut(s)	512
SmaI	CCCGGG	1 cut(s)	373
SmiMI	CAYNNNNRTG	1 cut(s)	1040
SmlI	CTYRAG	1 cut(s)	512
SmoI	CTYRAG	1 cut(s)	512
Sse9I	AATT	6 cut(s)	56, 78, 87, 617, 728, 1047
SsiI	CCGC	6 cut(s)	6, 290, 881, 890, 956, 1124
SspDI	GGCGCC	1 cut(s)	877
SspMI	CTAG	1 cut(s)	1152
SstI	GAGCTC	1 cut(s)	513
StyD4I	CCNGG	2 cut(s)	370, 371
StyI	CCWWGG	1 cut(s)	823
TaaI	ACNGT	1 cut(s)	358
TaiI	ACGT	1 cut(s)	503
TaqI	TCGA	2 cut(s)	201, 513
TaqII	GACCGA	2 cut(s)	365, 438
TasI	AATT	6 cut(s)	56, 78, 87, 617, 728, 1047
TatI	WGTACW	2 cut(s)	300, 829
TauI	GCSGC	2 cut(s)	883, 1127
TfiI	GAWTC	2 cut(s)	626, 905
Tru1I	TTAA	3 cut(s)	86, 1164, 1173
Tru9I	TTAA	3 cut(s)	86, 1164, 1173
TscAI	CASTG	1 cut(s)	103
TseFI	GTSAC	1 cut(s)	987
TseI	GCWGC	5 cut(s)	223, 278, 281, 667, 1003
Tsp45I	GTSAC	1 cut(s)	987
TspDTI	ATGAA	4 cut(s)	112, 800, 867, 1134
TspGWI	ACGGA	1 cut(s)	898
TspMI	CCCGGG	1 cut(s)	371
TspRI	CASTG	1 cut(s)	103
Tth111I	GACNNNGTC	1 cut(s)	449
VpaK11BI	GGWCC	1 cut(s)	820
VspI	ATTAAT	1 cut(s)	86
XapI	RAATTY	1 cut(s)	617
XceI	RCATGY	1 cut(s)	406
XcmI	CCANNNNNNNNNTGG	1 cut(s)	100
XhoI	CTCGAG	1 cut(s)	512
XmaI	CCCGGG	1 cut(s)	371
XmiI	GTMKAC	2 cut(s)	453, 582
XspI	CTAG	1 cut(s)	1152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.