MD10G1216100.v1.1

Anthocyanidin 5,3-O-glucosyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0004234
Physical Location & Seq
Forward (+)
31476083 .. 31477346
1264 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1216100.v1.1.491

Sequence Viewer

Length: 1119 bp
ATGGGGCACCTAGTCTCCGTTGTGGAGCTCGGCAAGCTTGTCCTCCACCGCTACGGGCCCCAGAACGTCTCCCGCCCTCTCATTCAAAATACCCAAAATGATCCCCATATCCGCCGTGCCCTCAAAGATATCTCCAAATCCTCCACCGCCATTCGCGCCTTAATCATCAACTTCTTCTGCATCTCTGCGCTTCCCATCGCAAAGGAACTCCACATCCCAACCCATTACTTCTACACTTCTGGTGCAGAAGCTCTTGCGGCTTTCTTGTACTTCCCCAAACTCCATGAACAAACCACCAAGAGTTTCCAGGACCTCACCAACACTGTTTTCGATATCCCCGGATTAAAGTCCCCTCTGAAGGCCATCCACTTGGTTCAGCCAATGCTCGACAGAGACCGCCCTGCTTACTGGGACATGCTCTACTTCTGCTCACATCTTCCCAAATCCAACGGTATCATTGTCAACACGGTCGAAGAACTCGAGCCTGCTTCCATCCTAAAGGCTATAGTCCAAGGTCTCTGCGTTTCTGATGGTCCCACTCCGCCTGTGTACCATATTGGACCCTTGATTGATGAAGAGAAAGAACCCGGTAATGCTACCGCGGAAGGGGAGGAGGACTGCCTGTTGTGCCCAAAAGGGTTGGAGAGGAGTGGGAAGAGGTTTCTGTGGGTGGTGAAGAAGCCGCCGGTAGATGTGAAAACAAAGCAAGTTCATGGAGTCGACGACGACCTTGATTTGGAGGGTCTGTTGCCTGAAGGGTTCTTGGAGAGGACCAATGACAGGGGCAAGGAATCGGTGGGTGGGTTTGTGACACATTGTGGCTGGATCTCGGTGCTCGAAGCAGTGGTTTCCGGGATATTATTGATTGCATGGCCACTGTATGCGGAGCAGCACATGAACAGAAATGTTCTGGTGAACGACATGGAAATAGCGTTAAGGGTGGAAGAGAGAGAGAGAGAGAGAGAGGAAGATGGGTTCGTGAGCGGGGAAGAATTGGAGAGGAAAGTGAGGGAGTTGATGGAGTTGGAAAGAGGGAAAGCGCTTAGAGAAAGGAGCAAGAAAACTGGAGAGATGGCATTGGATAAGCATAATTTAAGGAGAGACTGGTTCGTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

373

Amino Acids

42.06

Weight (kDa)

5.77

Isoelectric Point (pI)

37.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 263 - 304 4.1e-08 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 6
AccBSI CCGCTC 1 cut(s) 984
AccI GTMKAC 1 cut(s) 720
AccII CGCG 2 cut(s) 156, 602
AclWI GGATC 2 cut(s) 95, 833
AcoI YGGCCR 1 cut(s) 872
AcuI CTGAAG 2 cut(s) 377, 774
AdeI CACNNNGTG 1 cut(s) 818
AfaI GTAC 2 cut(s) 269, 551
AfeI AGCGCT 1 cut(s) 1041
AfiI CCNNNNNNNGG 4 cut(s) 358, 606, 736, 780
AgsI TTSAA 1 cut(s) 86
AjnI CCWGG 1 cut(s) 306
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AloI GAACNNNNNNTCC 4 cut(s) 198, 230, 959, 991
AluBI AGCT 3 cut(s) 28, 37, 251
AluI AGCT 3 cut(s) 28, 37, 251
Alw21I GWGCWC 2 cut(s) 30, 837
Alw26I GTCTC 5 cut(s) 19, 73, 387, 521, 1095
AlwI GGATC 2 cut(s) 95, 833
Ama87I CYCGRG 1 cut(s) 479
Aor51HI AGCGCT 1 cut(s) 1041
AoxI GGCC 3 cut(s) 56, 360, 872
ApaI GGGCCC 1 cut(s) 60
ApeKI GCWGC 1 cut(s) 889
AspLEI GCGC 3 cut(s) 158, 190, 1042
AspS9I GGNCC 6 cut(s) 56, 57, 310, 533, 560, 771
AsuC2I CCSGG 3 cut(s) 339, 588, 853
AsuHPI GGTGA 3 cut(s) 307, 685, 925
AvaI CYCGRG 1 cut(s) 479
AvaII GGWCC 4 cut(s) 310, 533, 560, 771
BaeGI GKGCMC 4 cut(s) 9, 60, 121, 632
BalI TGGCCA 1 cut(s) 874
BanI GGYRCC 1 cut(s) 6
BanII GRGCYC 2 cut(s) 30, 60
Bbv12I GWGCWC 2 cut(s) 30, 837
BbvI GCAGC 1 cut(s) 901
BccI CCATC 7 cut(s) 203, 371, 500, 524, 965, 1012, 1066
BceAI ACGGC 1 cut(s) 99
BciT130I CCWGG 1 cut(s) 308
BcnI CCSGG 3 cut(s) 339, 588, 853
BcoDI GTCTC 5 cut(s) 19, 73, 387, 521, 1095
BfaI CTAG 2 cut(s) 11, 1117
BfmI CTRYAG 1 cut(s) 504
BfoI RGCGCY 1 cut(s) 1043
BisI GCNGC 3 cut(s) 258, 683, 890
BlsI GCNGC 3 cut(s) 259, 684, 891
Bme1390I CCNGG 4 cut(s) 308, 339, 588, 853
Bme18I GGWCC 4 cut(s) 310, 533, 560, 771
BmeT110I CYCGRG 1 cut(s) 479
BmgT120I GGNCC 6 cut(s) 56, 57, 310, 533, 560, 771
BmiI GGNNCC 5 cut(s) 8, 58, 59, 535, 562
BmrFI CCNGG 4 cut(s) 308, 339, 588, 853
BmrI ACTGGG 1 cut(s) 418
BmsI GCATC 1 cut(s) 189
BmuI ACTGGG 1 cut(s) 418
BpmI CTGGAG 1 cut(s) 1086
BpuMI CCSGG 3 cut(s) 339, 588, 853
BsaI GGTCTC 2 cut(s) 387, 521
BsaJI CCNNGG 3 cut(s) 337, 511, 600
BsaXI ACNNNNNCTCC 3 cut(s) 29, 731, 761
Bsc4I CCNNNNNNNGG 4 cut(s) 358, 606, 736, 780
Bse118I RCCGGY 1 cut(s) 685
Bse1I ACTGG 3 cut(s) 413, 1069, 1109
BseBI CCWGG 1 cut(s) 308
BseDI CCNNGG 3 cut(s) 337, 511, 600
BseGI GGATG 3 cut(s) 213, 363, 492
BseLI CCNNNNNNNGG 4 cut(s) 358, 606, 736, 780
BseNI ACTGG 3 cut(s) 413, 1069, 1109
BseRI GAGGAG 2 cut(s) 626, 661
BseSI GKGCMC 4 cut(s) 9, 60, 121, 632
BseXI GCAGC 1 cut(s) 901
BsgI GTGCAG 1 cut(s) 264
Bsh1236I CGCG 2 cut(s) 156, 602
Bsh1285I CGRYCG 1 cut(s) 471
BshFI GGCC 3 cut(s) 58, 362, 874
BshNI GGYRCC 1 cut(s) 6
BsiEI CGRYCG 1 cut(s) 471
BsiHKAI GWGCWC 2 cut(s) 30, 837
BsiHKCI CYCGRG 1 cut(s) 479
BsiSI CCGG 4 cut(s) 339, 588, 686, 852
BslFI GGGAC 3 cut(s) 334, 425, 519
BslI CCNNNNNNNGG 4 cut(s) 358, 606, 736, 780
BsmAI GTCTC 5 cut(s) 19, 73, 387, 521, 1095
BsmBI CGTCTC 1 cut(s) 73
BsmFI GGGAC 3 cut(s) 334, 425, 519
BsnI GGCC 3 cut(s) 58, 362, 874
Bso31I GGTCTC 2 cut(s) 387, 521
BsoBI CYCGRG 1 cut(s) 479
Bsp120I GGGCCC 1 cut(s) 56
Bsp1286I GDGCHC 6 cut(s) 9, 30, 60, 121, 632, 837
Bsp143I GATC 2 cut(s) 100, 825
BspANI GGCC 3 cut(s) 58, 362, 874
BspFNI CGCG 2 cut(s) 156, 602
BspLI GGNNCC 5 cut(s) 8, 58, 59, 535, 562
BspPI GGATC 2 cut(s) 95, 833
BspT107I GGYRCC 1 cut(s) 6
BspTNI GGTCTC 2 cut(s) 387, 521
BsrBI CCGCTC 1 cut(s) 984
BsrFI RCCGGY 1 cut(s) 685
BsrI ACTGG 3 cut(s) 413, 1069, 1109
BssAI RCCGGY 1 cut(s) 685
BssECI CCNNGG 3 cut(s) 337, 511, 600
BssMI GATC 2 cut(s) 100, 825
BssT1I CCWWGG 1 cut(s) 511
Bst2UI CCWGG 1 cut(s) 308
Bst4CI ACNGT 4 cut(s) 325, 452, 469, 879
Bst6I CTCTTC 3 cut(s) 570, 650, 939
BstC8I GCNNGC 2 cut(s) 35, 486
BstDEI CTNAG 1 cut(s) 1043
BstDSI CCRYGG 1 cut(s) 600
BstF5I GGATG 3 cut(s) 213, 363, 492
BstFNI CGCG 2 cut(s) 156, 602
BstH2I RGCGCY 1 cut(s) 1043
BstHHI GCGC 3 cut(s) 158, 190, 1042
BstKTI GATC 2 cut(s) 103, 828
BstMAI GTCTC 5 cut(s) 19, 73, 387, 521, 1095
BstMBI GATC 2 cut(s) 100, 825
BstMCI CGRYCG 1 cut(s) 471
BstMWI GCNNNNNNNGC 4 cut(s) 34, 155, 257, 627
BstNI CCWGG 1 cut(s) 308
BstNSI RCATGY 1 cut(s) 418
BstSCI CCNGG 4 cut(s) 306, 337, 586, 851
BstSFI CTRYAG 1 cut(s) 504
BstSLI GKGCMC 4 cut(s) 9, 60, 121, 632
BstUI CGCG 2 cut(s) 156, 602
BstV1I GCAGC 1 cut(s) 901
BstX2I RGATCY 1 cut(s) 825
BstXI CCANNNNNNTGG 1 cut(s) 370
BstYI RGATCY 1 cut(s) 825
BsuRI GGCC 3 cut(s) 58, 362, 874
BtgI CCRYGG 1 cut(s) 600
BtgZI GCGATG 1 cut(s) 181
BtsCI GGATG 3 cut(s) 213, 363, 492
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 3 cut(s) 321, 849, 875
Cac8I GCNNGC 2 cut(s) 35, 486
CfoI GCGC 3 cut(s) 158, 190, 1042
Cfr10I RCCGGY 1 cut(s) 685
Cfr13I GGNCC 6 cut(s) 56, 57, 310, 533, 560, 771
Cfr42I CCGCGG 1 cut(s) 603
Csp6I GTAC 2 cut(s) 268, 550
CviAII CATG 6 cut(s) 284, 415, 713, 870, 895, 922
CviQI GTAC 2 cut(s) 268, 550
DdeI CTNAG 1 cut(s) 1043
DpnI GATC 2 cut(s) 102, 827
DpnII GATC 2 cut(s) 100, 825
DraIII CACNNNGTG 1 cut(s) 818
EaeI YGGCCR 1 cut(s) 872
Eam1104I CTCTTC 3 cut(s) 570, 650, 939
EarI CTCTTC 3 cut(s) 570, 650, 939
EciI GGCGGA 2 cut(s) 101, 531
Ecl136II GAGCTC 1 cut(s) 28
Eco130I CCWWGG 1 cut(s) 511
Eco24I GRGCYC 2 cut(s) 30, 60
Eco31I GGTCTC 2 cut(s) 387, 521
Eco32I GATATC 2 cut(s) 130, 334
Eco47I GGWCC 4 cut(s) 310, 533, 560, 771
Eco47III AGCGCT 1 cut(s) 1041
Eco53kI GAGCTC 1 cut(s) 28
Eco57I CTGAAG 2 cut(s) 377, 774
Eco88I CYCGRG 1 cut(s) 479
EcoICRI GAGCTC 1 cut(s) 28
EcoO109I RGGNCCY 2 cut(s) 57, 310
EcoRII CCWGG 1 cut(s) 306
EcoRV GATATC 2 cut(s) 130, 334
EcoT14I CCWWGG 1 cut(s) 511
EcoT38I GRGCYC 2 cut(s) 30, 60
ErhI CCWWGG 1 cut(s) 511
Esp3I CGTCTC 1 cut(s) 73
FaeI CATG 6 cut(s) 287, 418, 716, 873, 898, 925
FaqI GGGAC 3 cut(s) 334, 425, 519
FatI CATG 6 cut(s) 283, 414, 712, 869, 894, 921
FauI CCCGC 2 cut(s) 80, 977
FblI GTMKAC 1 cut(s) 720
Fnu4HI GCNGC 3 cut(s) 258, 683, 890
FokI GGATG 3 cut(s) 200, 350, 479
FriOI GRGCYC 2 cut(s) 30, 60
Fsp4HI GCNGC 3 cut(s) 258, 683, 890
FspBI CTAG 2 cut(s) 11, 1117
GlaI GCGC 3 cut(s) 157, 189, 1041
GluI GCNGC 3 cut(s) 258, 683, 890
GsuI CTGGAG 1 cut(s) 1086
HaeII RGCGCY 1 cut(s) 1043
HaeIII GGCC 3 cut(s) 58, 362, 874
HapII CCGG 4 cut(s) 339, 588, 686, 852
HhaI GCGC 3 cut(s) 158, 190, 1042
Hin1II CATG 6 cut(s) 287, 418, 716, 873, 898, 925
Hin6I GCGC 3 cut(s) 156, 188, 1040
HinP1I GCGC 3 cut(s) 156, 188, 1040
HincII GTYRAC 3 cut(s) 463, 721, 1114
HindII GTYRAC 3 cut(s) 463, 721, 1114
HindIII AAGCTT 1 cut(s) 35
HinfI GANTC 2 cut(s) 717, 791
HpaII CCGG 4 cut(s) 339, 588, 686, 852
HphI GGTGA 3 cut(s) 307, 685, 925
Hpy166II GTNNAC 5 cut(s) 463, 550, 721, 916, 1114
Hpy188I TCNGA 2 cut(s) 357, 529
Hpy188III TCNNGA 1 cut(s) 979
Hpy8I GTNNAC 5 cut(s) 463, 550, 721, 916, 1114
Hpy99I CGWCG 2 cut(s) 725, 728
HpyAV CCTTC 3 cut(s) 352, 599, 749
HpyCH4III ACNGT 4 cut(s) 325, 452, 469, 879
HpyCH4IV ACGT 1 cut(s) 66
HpyCH4V TGCA 3 cut(s) 180, 245, 869
HpyF10VI GCNNNNNNNGC 4 cut(s) 34, 155, 257, 627
HpyF3I CTNAG 1 cut(s) 1043
HpySE526I ACGT 1 cut(s) 66
Hsp92II CATG 6 cut(s) 287, 418, 716, 873, 898, 925
HspAI GCGC 3 cut(s) 156, 188, 1040
KspI CCGCGG 1 cut(s) 603
Kzo9I GATC 2 cut(s) 100, 825
LmnI GCTCC 3 cut(s) 25, 886, 1053
Lsp1109I GCAGC 1 cut(s) 901
LweI GCATC 1 cut(s) 189
MaeI CTAG 2 cut(s) 11, 1117
MaeII ACGT 1 cut(s) 66
MaeIII GTNAC 1 cut(s) 808
MalI GATC 2 cut(s) 102, 827
MbiI CCGCTC 1 cut(s) 984
MboI GATC 2 cut(s) 100, 825
MboII GAAGA 9 cut(s) 166, 428, 485, 587, 667, 688, 956, 980, 1001
MflI RGATCY 1 cut(s) 825
MhlI GDGCHC 6 cut(s) 9, 30, 60, 121, 632, 837
MlsI TGGCCA 1 cut(s) 874
MluCI AATT 2 cut(s) 992, 1090
MluNI TGGCCA 1 cut(s) 874
MlyI GAGTC 1 cut(s) 726
MmeI TCCRAC 3 cut(s) 471, 621, 1005
Mox20I TGGCCA 1 cut(s) 874
MscI TGGCCA 1 cut(s) 874
MseI TTAA 4 cut(s) 161, 344, 935, 1094
Msp20I TGGCCA 1 cut(s) 874
MspA1I CMGCKG 1 cut(s) 602
MspI CCGG 4 cut(s) 339, 588, 686, 852
MspR9I CCNGG 4 cut(s) 308, 339, 588, 853
MvaI CCWGG 1 cut(s) 308
MvnI CGCG 2 cut(s) 156, 602
MwoI GCNNNNNNNGC 4 cut(s) 34, 155, 257, 627
NciI CCSGG 3 cut(s) 339, 588, 853
NdeII GATC 2 cut(s) 100, 825
NlaIII CATG 6 cut(s) 287, 418, 716, 873, 898, 925
NlaIV GGNNCC 5 cut(s) 8, 58, 59, 535, 562
NmeAIII GCCGAG 1 cut(s) 9
NmuCI GTSAC 1 cut(s) 808
NspI RCATGY 1 cut(s) 418
PaeR7I CTCGAG 1 cut(s) 479
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PfeI GAWTC 1 cut(s) 791
PfoI TCCNGGA 2 cut(s) 306, 851
PkrI GCNGC 3 cut(s) 259, 684, 891
PleI GAGTC 1 cut(s) 725
PpsI GAGTC 1 cut(s) 725
PpuMI RGGWCCY 1 cut(s) 310
Psp124BI GAGCTC 1 cut(s) 30
Psp5II RGGWCCY 1 cut(s) 310
Psp6I CCWGG 1 cut(s) 306
PspGI CCWGG 1 cut(s) 306
PspN4I GGNNCC 5 cut(s) 8, 58, 59, 535, 562
PspOMI GGGCCC 1 cut(s) 56
PspPI GGNCC 6 cut(s) 56, 57, 310, 533, 560, 771
PspPPI RGGWCCY 1 cut(s) 310
PspXI VCTCGAGB 1 cut(s) 479
PsuI RGATCY 1 cut(s) 825
RsaI GTAC 2 cut(s) 269, 551
RsaNI GTAC 2 cut(s) 268, 550
SacI GAGCTC 1 cut(s) 30
SacII CCGCGG 1 cut(s) 603
SalI GTCGAC 1 cut(s) 719
SaqAI TTAA 4 cut(s) 161, 344, 935, 1094
SatI GCNGC 3 cut(s) 258, 683, 890
Sau3AI GATC 2 cut(s) 100, 825
Sau96I GGNCC 6 cut(s) 56, 57, 310, 533, 560, 771
SchI GAGTC 1 cut(s) 726
ScrFI CCNGG 4 cut(s) 308, 339, 588, 853
SduI GDGCHC 6 cut(s) 9, 30, 60, 121, 632, 837
SetI ASST 9 cut(s) 12, 30, 39, 69, 253, 315, 517, 662, 732
SfaNI GCATC 1 cut(s) 189
SfcI CTRYAG 1 cut(s) 504
Sfr274I CTCGAG 1 cut(s) 479
Sfr303I CCGCGG 1 cut(s) 603
SgrBI CCGCGG 1 cut(s) 603
SinI GGWCC 4 cut(s) 310, 533, 560, 771
SlaI CTCGAG 1 cut(s) 479
SmlI CTYRAG 1 cut(s) 479
SmoI CTYRAG 1 cut(s) 479
Sse9I AATT 2 cut(s) 992, 1090
SspMI CTAG 2 cut(s) 11, 1117
SstI GAGCTC 1 cut(s) 30
StyD4I CCNGG 4 cut(s) 306, 337, 586, 851
StyI CCWWGG 1 cut(s) 511
TaaI ACNGT 4 cut(s) 325, 452, 469, 879
TaiI ACGT 1 cut(s) 69
TaqI TCGA 6 cut(s) 330, 387, 471, 480, 720, 837
TasI AATT 2 cut(s) 992, 1090
TatI WGTACW 1 cut(s) 267
TauI GCSGC 2 cut(s) 260, 685
TfiI GAWTC 1 cut(s) 791
Tru1I TTAA 4 cut(s) 161, 344, 935, 1094
Tru9I TTAA 4 cut(s) 161, 344, 935, 1094
TscAI CASTG 3 cut(s) 328, 849, 882
TseFI GTSAC 1 cut(s) 808
TseI GCWGC 1 cut(s) 889
Tsp45I GTSAC 1 cut(s) 808
TspDTI ATGAA 4 cut(s) 300, 588, 701, 911
TspGWI ACGGA 1 cut(s) 7
TspRI CASTG 3 cut(s) 328, 849, 882
VpaK11BI GGWCC 4 cut(s) 310, 533, 560, 771
XceI RCATGY 1 cut(s) 418
XhoI CTCGAG 1 cut(s) 479
XmiI GTMKAC 1 cut(s) 720
XspI CTAG 2 cut(s) 11, 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.