Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0011362

Physical Location & Seq

Genomic Coordinates Reverse (-)

397633 .. 403712

Gene Structure 6080 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1004500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGGCTGTCGTTGATGTCACCAAATCTTGCCTCGATTCCATTAGCCAGATATCGGAGCACATTGAAGGTTCTGTTCTTTACTTAGATGCTGGATGTACAAAGAGCTTCCAGTACACAGGAGCGTTTCCCCTGTTACTGAACCATGGAGTACGTGCTCTGTGTAGTTTGGAAAACATTTCTTCTCTTGATACGGTGGTTGATTGGAATGCAAATTCTGATCCTGTAAGGAAAGTTGTGGTGATCACTTCTCGTCTACTAAGTGATGCACATCGATATATTTTACGTTGTCTGAGCACACATCAAGCTGTAGATTGTTGTACTGTATTCACATCTGTTTCAGAGATAGCTCATTCAGCGTATCCTGATTCACCTCTGGGACCAGATGCATTTCATGAATACGAGTCCTTGCTTGTCCAAGATTATGAGGAGCTTGTTAAGAAAGATAAGAAAAATTCCAGACGGACAGAAGGCAGCAACTTAAAGGACATATCTCAAAATGAAGCTAGTTTAAGTGCAAGAAATTTCATTGAAGACAAGTCAGTAGCTGATACAGAAGATGTAGGGAAAAAACTGGTTGTTTCTGTGCATCACTTCCCCATGATTTTGTGCCCCCTTTCACCAAGAGTATTTGTTTTACCTTCAGAGGGATCAGTTGGTGATGCATACTTATCAGTTAAACATGAGGATGCTCTTAGTCCAGGGTTGCCCCCCTTAAGTACTGGATTGCTTTCTGATGGTGACGATATTCCTGCCGGGGCAACGCTTACAGCAAATTTTCTTTACCATCTTGCTGCAAAGATGGACTTGAAGATGGAAATATTTTCACTTGGTGATCTCTCAAAAACTGTGGGGAAAATTATGACAGACATGTCAAGTCTTTATGATGTAGGTCGCCGTAAACGATCCGCAGGGCTATTACTCATTGATCGTACACTGGATCTTCTTACTCCATGCTGTCATGGAGATTCACTTGTTGATTGTATGTTTTCATCCCTGCCCCGCAGGGAAAAAACAACATCCTCCGCCCACCTAAAAAGCTCACAAAACCAACTCAAGCATGGCCCTTCTAACCTGGAACGTGCTTCTCTTGATGTTCAAATACCACTTGCCCTAGTTCTACGTGAAGAAGATAACAACACAGATAACTTTAGGCTTTTAGAAAGCATTGAAGCTTTTCTGTGCGGGTGGGATTCTGGGAACTCTGCCTCTCAGGTTTTGGATTTGATGAACCTAAAGAACAAAGTTCATAATGAGAAGCCGCTTGAGTTCGAGAATGAGCTTCTTAGTGGGTCTTTTGTTTCTACAGAAAGTTTTCGTGGAACACCATACATGGAAGCTATACTAGACAGGAGAACAAAAGATGGAGCTGTACTGGTGAAGAAGTGGCTTCAAGAAGCTCTTCGTCGGGAAAATATAACTGTGAATGTCAAATCGCGTCCTGGTTTTGTTACAAAGTCAGAGTTGCAACTTATGGTAAAAGCCCTAGCTAAAACGCAGTCATCTTTACTGAGAAATAAGGGAATTATTCAATTAGCAGCAGCTGCTCTGGTTGCCCTTGACGAATCTAATTCGGCCAGATGGGAAGCATTTATGAGTGCAGAGAGAATATTGAGTGTTGTAAGTGCTGGAGACACAACCCAGAGTCTTTCTGCTCAAATTGACGATCTTATCAATAAGACGGCTCTGATGGGATTGCATGGACAGAAGAACAAAAAGTCGGAGGCCTCAAAAGGACTACTTTCTTTTCAGGATGCCTTGCTCCTTATGATTTCTGGATATATATTAGCCGGTGAGAATTTTCCGACATCTGGGTCTGATGGCCCTTTTTCTTGGCAAGAGGAGAAATTGTTGAAGGATTCTATTGTTGAAGCAATTCTTGAAAACCCGTCAATAGCAAAACTCAAGTTTCTTCATGGTCTAATGGAAGAGCTCGAGACCAACTTAAGCAGGATCAAATCCGATGAAAGTAAAGAAACGTCTTCTGATCAAATAGACATCGATGATTTTGACGACGATCAGTGGGGTAAATGGGGCGATGAAGAAGTTGATAATAAAAATAACAGTAAAGAGCAAGTGTACAGTGACATGCAGCTGAAGTTGGAGCTGCGTGATAGGGTGGATAATCTTTTCAAATTCCTTCACAAGCTATCTAGTTTGAAGAGTAGGAACATACCATTGAAGGACGGGTCATTGTCTTCAGAAAATAATTTCAGTGGAGATCCATATGCAAGCAGAGGACTGCTATATAAGCTTCTAACAAGGGTTTTGGCGAAGAACGACGTACCTGGTCTGGAGTATCACTCGTCTACTGTGGGACAACTTTTTAAAAGTGGTTTCAGAAGATTTGGCCTTGGGCAGGCAAAACCAAGTTTAGCCGACCAAAATATCATCCTGGTTTTTGTCATTGGAGGAATCAATAGCGTCGAGGTTCGTGAAGCTCAAGAGGCATTATCCGAGAGTGGAAGGCCGGATATTGAATTGATTCTTGGAGGAACAACTCTCCTTACTCCTGACGACATGCTCGACTTACTACTGGGCAAGTCTAGTTACTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006508 GO:0006624 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016485 GO:0019538 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051604 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec1

Protein Analysis

852

Amino Acids

93.8

Weight (kDa)

5.23

Isoelectric Point (pI)

41.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	528 - 842	2e-08	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42700 AT2G42700 AT2G42700
fragaria_vesca	FvH4_6g27600 FvH4_6g27600
malus_domestica	MD11G1004500.v1.1
prunus_persica	Prupe.3G115700_v2.0.a1
pyrus_communis	pycom09g15450
rosa_chinensis	RchiOBHm_Chr2g0130091
rosa_laevigata	RLG00000019126
rosa_multiflora	Rmu_co7958197.1_g000001 Rmu_co8394299.1_g000001 Rmu_sc0010460.1_g000011
rosa_roxburghii	Rroxscaffold_2G00114090
rosa_rugosa	Rorug02G0291000
rosa_samantha	Rh2AG342800 Rh2BG350500 Rh2CG329900 Rh2DG369000
rosa_wichuraiana	Rw2G027670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	868, 1810
AccI	GTMKAC	2 cut(s)	253, 2306
AccII	CGCG	1 cut(s)	1435
AciI	CCGC	5 cut(s)	906, 1000, 1023, 1182, 1259
AclWI	GGATC	6 cut(s)	212, 655, 897, 945, 1958, 2213
AcoI	YGGCCR	1 cut(s)	1572
AcsI	RAATTY	6 cut(s)	211, 451, 520, 772, 1795, 2132
AcuI	CTGAAG	3 cut(s)	624, 2114, 2181
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	9 cut(s)	97, 113, 150, 319, 718, 931, 1371, 2078, 2283
AfiI	CCNNNNNNNGG	4 cut(s)	52, 644, 1808, 2356
AflII	CTTAAG	2 cut(s)	712, 1942
AflIII	ACRYGT	1 cut(s)	867
AjnI	CCWGG	5 cut(s)	697, 1071, 1438, 2284, 2391
AjuI	GAANNNNNNNTTGG	2 cut(s)	2469, 2501
Alw21I	GWGCWC	4 cut(s)	60, 157, 296, 1932
Alw26I	GTCTC	2 cut(s)	1623, 1928
AlwI	GGATC	6 cut(s)	212, 655, 897, 945, 1958, 2213
AlwNI	CAGNNNCTG	2 cut(s)	545, 1541
Ama87I	CYCGRG	1 cut(s)	1931
AoxI	GGCC	6 cut(s)	1060, 1572, 1722, 1819, 2347, 2465
ApeKI	GCWGC	7 cut(s)	471, 791, 1535, 1538, 1541, 2089, 2104
ApoI	RAATTY	6 cut(s)	211, 451, 520, 772, 1795, 2132
Asp700I	GAANNNNTTC	5 cut(s)	1173, 1311, 1398, 1872, 2481
AspS9I	GGNCC	3 cut(s)	377, 1061, 1820
AsuC2I	CCSGG	1 cut(s)	754
AsuHPI	GGTGA	9 cut(s)	10, 250, 360, 609, 668, 749, 842, 1387, 1802
AvaI	CYCGRG	1 cut(s)	1931
AvaII	GGWCC	1 cut(s)	377
BaeGI	GKGCMC	1 cut(s)	611
BaeI	ACNNNNGTAYC	2 cut(s)	180, 213
BanII	GRGCYC	1 cut(s)	1932
BbsI	GAAGAC	3 cut(s)	537, 1971, 2187
Bbv12I	GWGCWC	4 cut(s)	60, 157, 296, 1932
BbvI	GCAGC	7 cut(s)	483, 778, 1528, 1547, 1550, 2091, 2101
BccI	CCATC	8 cut(s)	728, 792, 793, 805, 1355, 1572, 1681, 1811
BceAI	ACGGC	2 cut(s)	879, 1695
BcgI	CGANNNNNNTGC	2 cut(s)	731, 765
BciT130I	CCWGG	5 cut(s)	699, 1073, 1440, 2286, 2393
BciVI	GTATCC	1 cut(s)	369
BclI	TGATCA	2 cut(s)	240, 1984
BcnI	CCSGG	1 cut(s)	754
BcoDI	GTCTC	2 cut(s)	1623, 1928
BfaI	CTAG	6 cut(s)	504, 1112, 1343, 1484, 2151, 2544
BfmI	CTRYAG	2 cut(s)	306, 1302
BfrI	CTTAAG	2 cut(s)	712, 1942
BfuI	GTATCC	1 cut(s)	369
BisI	GCNGC	8 cut(s)	472, 792, 1259, 1536, 1539, 1542, 2090, 2105
BlsI	GCNGC	8 cut(s)	473, 793, 1260, 1537, 1540, 1543, 2091, 2106
BmcAI	AGTACT	1 cut(s)	718
Bme1390I	CCNGG	6 cut(s)	699, 754, 1073, 1440, 2286, 2393
Bme18I	GGWCC	1 cut(s)	377
BmeT110I	CYCGRG	1 cut(s)	1931
BmgT120I	GGNCC	3 cut(s)	377, 1061, 1820
BmiI	GGNNCC	1 cut(s)	378
BmrFI	CCNGG	6 cut(s)	699, 754, 1073, 1440, 2286, 2393
BmrI	ACTGGG	1 cut(s)	2543
BmsI	GCATC	7 cut(s)	76, 253, 373, 595, 649, 676, 1741
BmuI	ACTGGG	1 cut(s)	2543
BpiI	GAAGAC	3 cut(s)	537, 1971, 2187
BplI	GAGNNNNNCTC	2 cut(s)	2285, 2317
BpmI	CTGGAG	2 cut(s)	1647, 2312
BpuEI	CTTGAG	4 cut(s)	1037, 1283, 1886, 2424
BpuMI	CCSGG	1 cut(s)	754
Bsa29I	ATCGAT	2 cut(s)	271, 1998
BsaAI	YACGTR	2 cut(s)	152, 1121
BsaBI	GATNNNNATC	1 cut(s)	267
BsaI	GGTCTC	1 cut(s)	1928
BsaJI	CCNNGG	4 cut(s)	142, 698, 753, 2350
BsaXI	ACNNNNNCTCC	2 cut(s)	1832, 1862
Bsc4I	CCNNNNNNNGG	4 cut(s)	52, 644, 1808, 2356
Bse118I	RCCGGY	1 cut(s)	1787
Bse1I	ACTGG	6 cut(s)	109, 576, 724, 939, 1377, 2538
Bse8I	GATNNNNATC	1 cut(s)	267
BseBI	CCWGG	5 cut(s)	699, 1073, 1440, 2286, 2393
BseCI	ATCGAT	2 cut(s)	271, 1998
BseDI	CCNNGG	4 cut(s)	142, 698, 753, 2350
BseGI	GGATG	6 cut(s)	98, 691, 989, 1016, 1756, 2388
BseJI	GATNNNNATC	1 cut(s)	267
BseLI	CCNNNNNNNGG	4 cut(s)	52, 644, 1808, 2356
BseMII	CTCAG	3 cut(s)	281, 1223, 1499
BseNI	ACTGG	6 cut(s)	109, 576, 724, 939, 1377, 2538
BseRI	GAGGAG	2 cut(s)	440, 1853
BseSI	GKGCMC	1 cut(s)	611
BseXI	GCAGC	7 cut(s)	483, 778, 1528, 1547, 1550, 2091, 2101
BsgI	GTGCAG	1 cut(s)	1617
Bsh1236I	CGCG	1 cut(s)	1435
BshFI	GGCC	6 cut(s)	1062, 1574, 1724, 1821, 2349, 2467
BshVI	ATCGAT	2 cut(s)	271, 1998
BsiHKAI	GWGCWC	4 cut(s)	60, 157, 296, 1932
BsiHKCI	CYCGRG	1 cut(s)	1931
BsiSI	CCGG	3 cut(s)	753, 1788, 2468
BslFI	GGGAC	2 cut(s)	390, 2328
BslI	CCNNNNNNNGG	4 cut(s)	52, 644, 1808, 2356
BsmAI	GTCTC	2 cut(s)	1623, 1928
BsmFI	GGGAC	2 cut(s)	390, 2328
BsmI	GAATGC	1 cut(s)	211
BsnI	GGCC	6 cut(s)	1062, 1574, 1724, 1821, 2349, 2467
Bso31I	GGTCTC	1 cut(s)	1928
BsoBI	CYCGRG	1 cut(s)	1931
Bsp1286I	GDGCHC	5 cut(s)	60, 157, 296, 611, 1932
Bsp1407I	TGTACA	2 cut(s)	95, 2076
Bsp19I	CCATGG	1 cut(s)	142
BspACI	CCGC	5 cut(s)	906, 1000, 1023, 1182, 1259
BspANI	GGCC	6 cut(s)	1062, 1574, 1724, 1821, 2349, 2467
BspCNI	CTCAG	3 cut(s)	282, 1222, 1500
BspDI	ATCGAT	2 cut(s)	271, 1998
BspFNI	CGCG	1 cut(s)	1435
BspHI	TCATGA	1 cut(s)	391
BspLI	GGNNCC	1 cut(s)	378
BspPI	GGATC	6 cut(s)	212, 655, 897, 945, 1958, 2213
BspQI	GCTCTTC	2 cut(s)	1404, 1920
BspTI	CTTAAG	2 cut(s)	712, 1942
BspTNI	GGTCTC	1 cut(s)	1928
BsrFI	RCCGGY	1 cut(s)	1787
BsrGI	TGTACA	2 cut(s)	95, 2076
BsrI	ACTGG	6 cut(s)	109, 576, 724, 939, 1377, 2538
BssAI	RCCGGY	1 cut(s)	1787
BssECI	CCNNGG	4 cut(s)	142, 698, 753, 2350
BssT1I	CCWWGG	2 cut(s)	142, 2350
Bst2UI	CCWGG	5 cut(s)	699, 1073, 1440, 2286, 2393
Bst4CI	ACNGT	7 cut(s)	193, 322, 847, 1420, 2063, 2081, 2311
Bst6I	CTCTTC	3 cut(s)	1404, 1920, 2153
BstAFI	CTTAAG	2 cut(s)	712, 1942
BstAPI	GCANNNNNTGC	1 cut(s)	1541
BstAUI	TGTACA	2 cut(s)	95, 2076
BstBAI	YACGTR	2 cut(s)	152, 1121
BstC8I	GCNNGC	2 cut(s)	2230, 2358
BstDEI	CTNAG	7 cut(s)	82, 257, 290, 692, 1209, 1283, 1508
BstDSI	CCRYGG	1 cut(s)	142
BstENI	CCTNNNNNAGG	1 cut(s)	2354
BstF5I	GGATG	6 cut(s)	98, 691, 989, 1016, 1756, 2388
BstFNI	CGCG	1 cut(s)	1435
BstMAI	GTCTC	2 cut(s)	1623, 1928
BstMWI	GCNNNNNNNGC	5 cut(s)	353, 1541, 1550, 2248, 2444
BstNI	CCWGG	5 cut(s)	699, 1073, 1440, 2286, 2393
BstNSI	RCATGY	3 cut(s)	871, 2089, 2521
BstSCI	CCNGG	6 cut(s)	697, 752, 1071, 1438, 2284, 2391
BstSFI	CTRYAG	2 cut(s)	306, 1302
BstSLI	GKGCMC	1 cut(s)	611
BstUI	CGCG	1 cut(s)	1435
BstV1I	GCAGC	7 cut(s)	483, 778, 1528, 1547, 1550, 2091, 2101
BstV2I	GAAGAC	3 cut(s)	537, 1971, 2187
BstX2I	RGATCY	2 cut(s)	937, 2218
BstYI	RGATCY	2 cut(s)	937, 2218
Bsu15I	ATCGAT	2 cut(s)	271, 1998
BsuI	GTATCC	1 cut(s)	369
BsuRI	GGCC	6 cut(s)	1062, 1574, 1724, 1821, 2349, 2467
BsuTUI	ATCGAT	2 cut(s)	271, 1998
BtgI	CCRYGG	1 cut(s)	142
BtgZI	GCGATG	1 cut(s)	2049
BtsCI	GGATG	6 cut(s)	98, 691, 989, 1016, 1756, 2388
BtsIMutI	CAGTG	4 cut(s)	932, 2024, 2086, 2218
Cac8I	GCNNGC	2 cut(s)	2230, 2358
CaiI	CAGNNNCTG	2 cut(s)	545, 1541
CciI	TCATGA	1 cut(s)	391
Cfr10I	RCCGGY	1 cut(s)	1787
Cfr13I	GGNCC	3 cut(s)	377, 1061, 1820
ClaI	ATCGAT	2 cut(s)	271, 1998
CseI	GACGC	2 cut(s)	1424, 2410
CsiI	ACCWGGT	1 cut(s)	2284
Csp6I	GTAC	9 cut(s)	96, 112, 149, 318, 717, 930, 1370, 2077, 2282
CspCI	CAANNNNNGTGG	2 cut(s)	828, 863
CviQI	GTAC	9 cut(s)	96, 112, 149, 318, 717, 930, 1370, 2077, 2282
DdeI	CTNAG	7 cut(s)	82, 257, 290, 692, 1209, 1283, 1508
DraI	TTTAAA	1 cut(s)	2326
DraIII	CACNNNGTG	1 cut(s)	830
DrdI	GACNNNNNNGTC	2 cut(s)	868, 1810
DseDI	GACNNNNNNGTC	2 cut(s)	868, 1810
EaeI	YGGCCR	1 cut(s)	1572
Eam1104I	CTCTTC	3 cut(s)	1404, 1920, 2153
EarI	CTCTTC	3 cut(s)	1404, 1920, 2153
EciI	GGCGGA	1 cut(s)	1012
Ecl136II	GAGCTC	1 cut(s)	1930
Eco130I	CCWWGG	2 cut(s)	142, 2350
Eco147I	AGGCCT	1 cut(s)	1724
Eco24I	GRGCYC	1 cut(s)	1932
Eco31I	GGTCTC	1 cut(s)	1928
Eco32I	GATATC	1 cut(s)	51
Eco47I	GGWCC	1 cut(s)	377
Eco53kI	GAGCTC	1 cut(s)	1930
Eco57I	CTGAAG	3 cut(s)	624, 2114, 2181
Eco88I	CYCGRG	1 cut(s)	1931
EcoICRI	GAGCTC	1 cut(s)	1930
EcoNI	CCTNNNNNAGG	1 cut(s)	2354
EcoRII	CCWGG	5 cut(s)	697, 1071, 1438, 2284, 2391
EcoRV	GATATC	1 cut(s)	51
EcoT14I	CCWWGG	2 cut(s)	142, 2350
EcoT22I	ATGCAT	2 cut(s)	388, 664
EcoT38I	GRGCYC	1 cut(s)	1932
ErhI	CCWWGG	2 cut(s)	142, 2350
FalI	AAGNNNNNCTT	8 cut(s)	788, 820, 1383, 1415, 1722, 1754, 1860, 1892
FaqI	GGGAC	2 cut(s)	390, 2328
FauI	CCCGC	2 cut(s)	1007, 1175
FauNDI	CATATG	1 cut(s)	2224
FbaI	TGATCA	2 cut(s)	240, 1984
FblI	GTMKAC	2 cut(s)	253, 2306
Fnu4HI	GCNGC	8 cut(s)	472, 792, 1259, 1536, 1539, 1542, 2090, 2105
FokI	GGATG	6 cut(s)	105, 698, 976, 1003, 1763, 2375
FriOI	GRGCYC	1 cut(s)	1932
Fsp4HI	GCNGC	8 cut(s)	472, 792, 1259, 1536, 1539, 1542, 2090, 2105
FspBI	CTAG	6 cut(s)	504, 1112, 1343, 1484, 2151, 2544
GluI	GCNGC	8 cut(s)	472, 792, 1259, 1536, 1539, 1542, 2090, 2105
GsuI	CTGGAG	2 cut(s)	1647, 2312
HaeIII	GGCC	6 cut(s)	1062, 1574, 1724, 1821, 2349, 2467
HapII	CCGG	3 cut(s)	753, 1788, 2468
HgaI	GACGC	2 cut(s)	1424, 2410
HindIII	AAGCTT	2 cut(s)	1170, 2249
HpaII	CCGG	3 cut(s)	753, 1788, 2468
HphI	GGTGA	9 cut(s)	10, 250, 360, 609, 668, 749, 842, 1387, 1802
Hpy166II	GTNNAC	6 cut(s)	114, 254, 899, 932, 2077, 2307
Hpy8I	GTNNAC	6 cut(s)	114, 254, 899, 932, 2077, 2307
Hpy99I	CGWCG	4 cut(s)	1407, 2015, 2282, 2426
HpyAV	CCTTC	8 cut(s)	59, 461, 648, 1074, 1846, 2147, 2173, 2457
HpyCH4III	ACNGT	7 cut(s)	193, 322, 847, 1420, 2063, 2081, 2311
HpyCH4IV	ACGT	6 cut(s)	151, 283, 1078, 1120, 1976, 2280
HpyF10VI	GCNNNNNNNGC	5 cut(s)	353, 1541, 1550, 2248, 2444
HpyF3I	CTNAG	7 cut(s)	82, 257, 290, 692, 1209, 1283, 1508
HpySE526I	ACGT	6 cut(s)	151, 283, 1078, 1120, 1976, 2280
Ksp22I	TGATCA	2 cut(s)	240, 1984
LguI	GCTCTTC	2 cut(s)	1404, 1920
LmnI	GCTCC	6 cut(s)	55, 119, 427, 1364, 1764, 2101
Lsp1109I	GCAGC	7 cut(s)	483, 778, 1528, 1547, 1550, 2091, 2101
LweI	GCATC	7 cut(s)	76, 253, 373, 595, 649, 676, 1741
MabI	ACCWGGT	1 cut(s)	2284
MaeI	CTAG	6 cut(s)	504, 1112, 1343, 1484, 2151, 2544
MaeII	ACGT	6 cut(s)	151, 283, 1078, 1120, 1976, 2280
MaeIII	GTNAC	6 cut(s)	16, 132, 737, 1447, 2081, 2546
MflI	RGATCY	2 cut(s)	937, 2218
MhlI	GDGCHC	5 cut(s)	60, 157, 296, 611, 1932
MlyI	GAGTC	2 cut(s)	410, 1651
MmeI	TCCRAC	3 cut(s)	1698, 1826, 2079
Mph1103I	ATGCAT	2 cut(s)	388, 664
MroXI	GAANNNNTTC	5 cut(s)	1173, 1311, 1398, 1872, 2481
MseI	TTAA	7 cut(s)	435, 479, 509, 675, 713, 1943, 2325
MslI	CAYNNNNRTG	1 cut(s)	684
MspA1I	CMGCKG	2 cut(s)	1541, 2092
MspCI	CTTAAG	2 cut(s)	712, 1942
MspI	CCGG	3 cut(s)	753, 1788, 2468
MspR9I	CCNGG	6 cut(s)	699, 754, 1073, 1440, 2286, 2393
Mva1269I	GAATGC	1 cut(s)	211
MvaI	CCWGG	5 cut(s)	699, 1073, 1440, 2286, 2393
MvnI	CGCG	1 cut(s)	1435
MwoI	GCNNNNNNNGC	5 cut(s)	353, 1541, 1550, 2248, 2444
NciI	CCSGG	1 cut(s)	754
NcoI	CCATGG	1 cut(s)	142
NdeI	CATATG	1 cut(s)	2224
NlaIV	GGNNCC	1 cut(s)	378
NmuCI	GTSAC	3 cut(s)	16, 737, 2081
NsiI	ATGCAT	2 cut(s)	388, 664
NspI	RCATGY	3 cut(s)	871, 2089, 2521
PaeR7I	CTCGAG	1 cut(s)	1931
PagI	TCATGA	1 cut(s)	391
PceI	AGGCCT	1 cut(s)	1724
PciI	ACATGT	1 cut(s)	867
PciSI	GCTCTTC	2 cut(s)	1404, 1920
PcsI	WCGNNNNNNNCGW	2 cut(s)	898, 2520
PctI	GAATGC	1 cut(s)	211
PdmI	GAANNNNTTC	5 cut(s)	1173, 1311, 1398, 1872, 2481
PfeI	GAWTC	8 cut(s)	35, 365, 965, 1190, 1562, 1856, 2412, 2482
PkrI	GCNGC	8 cut(s)	473, 793, 1260, 1537, 1540, 1543, 2091, 2106
PleI	GAGTC	2 cut(s)	409, 1650
PpsI	GAGTC	2 cut(s)	409, 1650
Ppu21I	YACGTR	2 cut(s)	152, 1121
PscI	ACATGT	1 cut(s)	867
Psp124BI	GAGCTC	1 cut(s)	1932
Psp6I	CCWGG	5 cut(s)	697, 1071, 1438, 2284, 2391
PspGI	CCWGG	5 cut(s)	697, 1071, 1438, 2284, 2391
PspN4I	GGNNCC	1 cut(s)	378
PspPI	GGNCC	3 cut(s)	377, 1061, 1820
PstNI	CAGNNNCTG	2 cut(s)	545, 1541
PsuI	RGATCY	2 cut(s)	937, 2218
PvuII	CAGCTG	2 cut(s)	1541, 2092
RsaI	GTAC	9 cut(s)	97, 113, 150, 319, 718, 931, 1371, 2078, 2283
RsaNI	GTAC	9 cut(s)	96, 112, 149, 318, 717, 930, 1370, 2077, 2282
RseI	CAYNNNNRTG	1 cut(s)	684
SacI	GAGCTC	1 cut(s)	1932
SapI	GCTCTTC	2 cut(s)	1404, 1920
SaqAI	TTAA	7 cut(s)	435, 479, 509, 675, 713, 1943, 2325
SatI	GCNGC	8 cut(s)	472, 792, 1259, 1536, 1539, 1542, 2090, 2105
Sau96I	GGNCC	3 cut(s)	377, 1061, 1820
ScaI	AGTACT	1 cut(s)	718
SchI	GAGTC	2 cut(s)	410, 1651
ScrFI	CCNGG	6 cut(s)	699, 754, 1073, 1440, 2286, 2393
SduI	GDGCHC	5 cut(s)	60, 157, 296, 611, 1932
SexAI	ACCWGGT	1 cut(s)	2284
SfaNI	GCATC	7 cut(s)	76, 253, 373, 595, 649, 676, 1741
SfcI	CTRYAG	2 cut(s)	306, 1302
Sfr274I	CTCGAG	1 cut(s)	1931
SinI	GGWCC	1 cut(s)	377
SlaI	CTCGAG	1 cut(s)	1931
SmiMI	CAYNNNNRTG	1 cut(s)	684
SmlI	CTYRAG	7 cut(s)	712, 1052, 1262, 1901, 1931, 1942, 2439
SmoI	CTYRAG	7 cut(s)	712, 1052, 1262, 1901, 1931, 1942, 2439
SseBI	AGGCCT	1 cut(s)	1724
SsiI	CCGC	5 cut(s)	906, 1000, 1023, 1182, 1259
SspI	AATATT	2 cut(s)	819, 1608
SspMI	CTAG	6 cut(s)	504, 1112, 1343, 1484, 2151, 2544
SstI	GAGCTC	1 cut(s)	1932
StuI	AGGCCT	1 cut(s)	1724
StyD4I	CCNGG	6 cut(s)	697, 752, 1071, 1438, 2284, 2391
StyI	CCWWGG	2 cut(s)	142, 2350
TaaI	ACNGT	7 cut(s)	193, 322, 847, 1420, 2063, 2081, 2311
TaiI	ACGT	6 cut(s)	154, 286, 1081, 1123, 1979, 2283
TaqI	TCGA	7 cut(s)	33, 271, 1269, 1932, 1998, 2424, 2523
TatI	WGTACW	6 cut(s)	95, 111, 317, 716, 1369, 2076
TauI	GCSGC	1 cut(s)	1261
TfiI	GAWTC	8 cut(s)	35, 365, 965, 1190, 1562, 1856, 2412, 2482
Tru1I	TTAA	7 cut(s)	435, 479, 509, 675, 713, 1943, 2325
Tru9I	TTAA	7 cut(s)	435, 479, 509, 675, 713, 1943, 2325
TscAI	CASTG	4 cut(s)	939, 2024, 2086, 2218
TseFI	GTSAC	3 cut(s)	16, 737, 2081
TseI	GCWGC	7 cut(s)	471, 791, 1535, 1538, 1541, 2089, 2104
Tsp45I	GTSAC	3 cut(s)	16, 737, 2081
TspGWI	ACGGA	1 cut(s)	475
TspRI	CASTG	4 cut(s)	939, 2024, 2086, 2218
Vha464I	CTTAAG	2 cut(s)	712, 1942
VpaK11BI	GGWCC	1 cut(s)	377
XagI	CCTNNNNNAGG	1 cut(s)	2354
XapI	RAATTY	6 cut(s)	211, 451, 520, 772, 1795, 2132
XceI	RCATGY	3 cut(s)	871, 2089, 2521
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1055
XhoI	CTCGAG	1 cut(s)	1931
XmiI	GTMKAC	2 cut(s)	253, 2306
XmnI	GAANNNNTTC	5 cut(s)	1173, 1311, 1398, 1872, 2481
XspI	CTAG	6 cut(s)	504, 1112, 1343, 1484, 2151, 2544
ZrmI	AGTACT	1 cut(s)	718
Zsp2I	ATGCAT	2 cut(s)	388, 664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.