Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0009427

Physical Location & Seq

Genomic Coordinates Forward (+)

2824193 .. 2828318

Gene Structure 4126 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1032400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGTTGCAAAAAGTGCTACAAGTTCTCCTAGTCCTAAGGTGGAGGTCGGAGAGATCGACACCAGGGCACCTTTCCAATCTGTTAAAGATGCTGTTTCACTATTTGGTGAAGGTGCATTCTCGGGGGAGAAACCTGCCATTAAGAAGACAAAAGCTCATTCAGCAGAGAGGGTGCTAGCCAACGAGACACAGCTTCATCTGGCCCAAAAAGAACTGTACAAGTTGAAGGAACAACTGAAGAATGCTGAAACTACTAAAGCCCAAGCACTTGTGGAGCTAGAAAAATCCAAGGCAATTCTTGAGGATTTGTCAAACAAGGTGAAAGCCCTCAGTGAAAGTAAGGAATTTGCAATAAAGGCGACAGAAGCTGCCAAATGTCAGGCAAAGCAACTTGAAGAATCAAACTGTGGCAACCTTGCGGGAACTGATGGTGCTTGGAAACAAGACTTGGAATCTTCAAGAGCACAGTACATGAGTGTGATTACTGAACTTAATTCTGCAAAGCAAGAGTTACAGAAAATCCGTCAAGACTGTGATGCATCCTTGGAAGCAAAAGCTGCTGCCATCAAGCAGGTAGCAGAAGCTGAAGATGCAGCCAAGGCCAATGTGGAGAGGGTTAATGAGATCTCGATGGAAATTTCGGCTGTACAAGAATCAATTGGGGAAGTGAAGCTCGCGTCTATGGAAGCCCAGCAGGAGCAAGCAAAGATATTTGCTGAAAAGGATGTTTTGAGGCAGTCCTATAAAGGTACACTGGAAGAGTCAGAAAAGAAATTGCTTTCTCTGAAAAAAGAGTTTGATCCAGAACTTTCTAGAAATCTTGAAGCACAACTTTCTGAAACTTTGAATGAAGTTGGAGCATTGCAAAAGCAAATGGAGAATGCAAGGGCTTCGGATTTAGATTCTCTCAGAAGTGTCACTTTGGAGATAGATGATGCTAAGGAATCACTGAATAAAGTAGCCGAAGAAGAAAGCAGCCTCAGAAACTTAGTTGAAGCCCTCAAGGTGGAGCTTGAGAATGTGAGGAAAGAGCATGTTGAACTGAAGGAGAAGGAAGCAGAAACAGAATCGCTTGCTGGGAATTTACATGTCAAACTGCGGAAAACTAAGTCTGAGCTTGAAGCATGCCTGGCAGAAGAATCTAAAGCAAGAGGTGCTTCCAATGAAATGATAGCCGCACTAAACCAGCTATCTTCAGAAACCGAGAATGCCAGACGAGAAGCAGAAGAGATGAAGATAAAAGCAGAGGAGTTGAAGAAGGAAGCAGAAACCACTAAACTTGCTGTAAAAGAAGCAGAAAAGAAGCTGAGACTTGCCTTGGTGGAAGCCGAAGAGGCTAAAGCCGCAGAAGAAAGGGCCCTTGAACAGATTAGAGTTCTATCTGAGAGAACAAACGCTGCTAGGGCATCAATTTCCGAGTCTGGTGCCAAGATCACTATATCAAAGGATGAGTATGAGTCTTTGAGCCGAAAGGTTGAGGAGTCTGATACATTAGCAGAAATGAAAGTGGCTGCTGCCATGGCTCAGGTGGAAGCTGTGAAGGCTAGTGAAAACGAGGCCTTGAAGAGGTTAGAGGCAACCCAGAAGGAAATGGAGGAAATAAAGGCTGCAACTGAGGAGACCAAAAAGAGGGCAGAAATGGCTGAAGCCGCGAAAAAGGCAGTGGAAGGAGAGCTCCGAAGGTGGCGAGAAAGGGAGCAGAAGAAAGCAGCTGATGCTGCACTGCGGATACTGACAGAAACAGAGACGTCAGTGGAATCATCCCCACGGCATTACAGAATTCAAAAGCAGAACCCTCAAACGAAAACTATTGAGGCCCGGAAGTTGAACAAAGATAATACATCCATTACGAAAAAGACACTCTTGCCTACTCTCAGCGGCATGTTCAACAGAAAAAAGAACCAGGTCGAGGGCGGCTCCCCCTCTTATCTCCCTGGTGAGAAACCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016020 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

651

Amino Acids

71.99

Weight (kDa)

5.49

Isoelectric Point (pI)

46.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	18 - 568	1.9e-56	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55860
fragaria_vesca	FvH4_3g42741
malus_domestica	MD03G1029200.v1.1 MD11G1032400.v1.1
prunus_persica	Prupe.6G025300_v2.0.a1 Prupe.6G025300_v2.0.a1
pyrus_communis	pycom11g02810
rosa_chinensis	RchiOBHm_Chr5g0076481 RchiOBHm_Chr5g0076551 RchiOBHm_Chr5g0076561 RchiOBHm_Chr5g0076571 RchiOBHm_Chr5g0076581
rosa_laevigata	RLG00000036623 RLG00000036624
rosa_multiflora	Rmu_ssc0000184.1_g000038
rosa_roxburghii	Rroxscaffold_1G00005420
rosa_rugosa	Rorug05G0448500
rosa_samantha	Rh5AG503200 Rh5BG524900 Rh5CG548500 Rh5DG536700
rosa_wichuraiana	Rw5G046670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1751
Acc36I	ACCTGC	2 cut(s)	142, 562
AccB1I	GGYRCC	2 cut(s)	67, 1424
AccII	CGCG	2 cut(s)	677, 1652
AciI	CCGC	8 cut(s)	419, 1099, 1176, 1344, 1650, 1726, 1878, 1914
AclWI	GGATC	1 cut(s)	794
AcsI	RAATTY	4 cut(s)	344, 636, 1081, 1779
AcuI	CTGAAG	5 cut(s)	257, 606, 1064, 1179, 1665
AcyI	GRCGYC	1 cut(s)	1748
AfaI	GTAC	4 cut(s)	218, 470, 648, 751
AfiI	CCNNNNNNNGG	4 cut(s)	1006, 1566, 1629, 1909
AflIII	ACRYGT	1 cut(s)	1087
AjnI	CCWGG	4 cut(s)	62, 1128, 1902, 1933
AjuI	GAANNNNNNNTTGG	2 cut(s)	431, 463
Alw21I	GWGCWC	2 cut(s)	466, 1677
Alw26I	GTCTC	4 cut(s)	179, 1303, 1613, 1739
AlwI	GGATC	1 cut(s)	794
AlwNI	CAGNNNCTG	2 cut(s)	368, 584
Ama87I	CYCGRG	1 cut(s)	121
AoxI	GGCC	5 cut(s)	201, 600, 1356, 1557, 1815
ApaI	GGGCCC	1 cut(s)	1360
ApoI	RAATTY	4 cut(s)	344, 636, 1081, 1779
AspS9I	GGNCC	4 cut(s)	202, 1356, 1357, 1816
AsuC2I	CCSGG	1 cut(s)	1819
AsuHPI	GGTGA	3 cut(s)	119, 331, 1949
AsuNHI	GCTAGC	1 cut(s)	175
AvaI	CYCGRG	1 cut(s)	121
AxyI	CCTNAGG	1 cut(s)	36
BaeGI	GKGCMC	2 cut(s)	70, 1360
BanI	GGYRCC	2 cut(s)	67, 1424
BanII	GRGCYC	2 cut(s)	1360, 1677
BbsI	GAAGAC	1 cut(s)	152
Bbv12I	GWGCWC	2 cut(s)	466, 1677
BccI	CCATC	3 cut(s)	422, 572, 625
BceAI	ACGGC	1 cut(s)	1784
BcgI	CGANNNNNNTGC	4 cut(s)	873, 907, 1406, 1440
BciT130I	CCWGG	4 cut(s)	64, 1130, 1904, 1935
BciVI	GTATCC	1 cut(s)	1722
BcnI	CCSGG	1 cut(s)	1819
BcoDI	GTCTC	4 cut(s)	179, 1303, 1613, 1739
BfaI	CTAG	6 cut(s)	30, 176, 278, 813, 1401, 1545
BfuAI	ACCTGC	2 cut(s)	142, 562
BfuI	GTATCC	1 cut(s)	1722
BglI	GCCNNNNNGGC	1 cut(s)	1334
BglII	AGATCT	1 cut(s)	624
Bme1390I	CCNGG	5 cut(s)	64, 1130, 1819, 1904, 1935
BmeT110I	CYCGRG	1 cut(s)	121
BmgT120I	GGNCC	4 cut(s)	202, 1356, 1357, 1816
BmiI	GGNNCC	4 cut(s)	69, 1358, 1426, 1918
BmrFI	CCNGG	5 cut(s)	64, 1130, 1819, 1904, 1935
BmsI	GCATC	7 cut(s)	79, 526, 548, 580, 925, 1415, 1705
BmtI	GCTAGC	1 cut(s)	179
BpiI	GAAGAC	1 cut(s)	152
BplI	GAGNNNNNCTC	2 cut(s)	1901, 1933
Bpu10I	CCTNAGC	2 cut(s)	939, 1524
BpuEI	CTTGAG	3 cut(s)	320, 986, 1034
BpuMI	CCSGG	1 cut(s)	1819
BsaHI	GRCGYC	1 cut(s)	1748
BsaI	GGTCTC	1 cut(s)	1613
BsaJI	CCNNGG	8 cut(s)	63, 288, 543, 597, 1317, 1518, 1766, 1933
BsaXI	ACNNNNNCTCC	2 cut(s)	10, 40
Bsc4I	CCNNNNNNNGG	4 cut(s)	1006, 1566, 1629, 1909
Bse1I	ACTGG	1 cut(s)	759
Bse21I	CCTNAGG	1 cut(s)	36
Bse3DI	GCAATG	1 cut(s)	860
BseBI	CCWGG	4 cut(s)	64, 1130, 1904, 1935
BseDI	CCNNGG	8 cut(s)	63, 288, 543, 597, 1317, 1518, 1766, 1933
BseGI	GGATG	5 cut(s)	539, 730, 1453, 1760, 1841
BseLI	CCNNNNNNNGG	4 cut(s)	1006, 1566, 1629, 1909
BseMI	GCAATG	1 cut(s)	860
BseMII	CTCAG	9 cut(s)	343, 922, 994, 1104, 1298, 1374, 1538, 1605, 1888
BseNI	ACTGG	1 cut(s)	759
BseRI	GAGGAG	3 cut(s)	1262, 1493, 1631
BseSI	GKGCMC	2 cut(s)	70, 1360
BseYI	CCCAGC	2 cut(s)	690, 1076
BsgI	GTGCAG	1 cut(s)	1704
Bsh1236I	CGCG	2 cut(s)	677, 1652
BshFI	GGCC	5 cut(s)	203, 602, 1358, 1559, 1817
BshNI	GGYRCC	2 cut(s)	67, 1424
BsiHKAI	GWGCWC	2 cut(s)	466, 1677
BsiHKCI	CYCGRG	1 cut(s)	121
BsiSI	CCGG	1 cut(s)	1819
BslI	CCNNNNNNNGG	4 cut(s)	1006, 1566, 1629, 1909
BsmAI	GTCTC	4 cut(s)	179, 1303, 1613, 1739
BsmBI	CGTCTC	1 cut(s)	1739
BsmI	GAATGC	4 cut(s)	116, 247, 886, 1213
BsnI	GGCC	5 cut(s)	203, 602, 1358, 1559, 1817
Bso31I	GGTCTC	1 cut(s)	1613
BsoBI	CYCGRG	1 cut(s)	121
Bsp120I	GGGCCC	1 cut(s)	1356
Bsp1286I	GDGCHC	4 cut(s)	70, 466, 1360, 1677
Bsp1407I	TGTACA	2 cut(s)	216, 646
Bsp143I	GATC	4 cut(s)	54, 624, 799, 1431
Bsp19I	CCATGG	1 cut(s)	1518
BspACI	CCGC	8 cut(s)	419, 1099, 1176, 1344, 1650, 1726, 1878, 1914
BspANI	GGCC	5 cut(s)	203, 602, 1358, 1559, 1817
BspCNI	CTCAG	9 cut(s)	342, 921, 993, 1105, 1299, 1375, 1537, 1606, 1887
BspFNI	CGCG	2 cut(s)	677, 1652
BspLI	GGNNCC	4 cut(s)	69, 1358, 1426, 1918
BspMI	ACCTGC	2 cut(s)	142, 562
BspOI	GCTAGC	1 cut(s)	179
BspPI	GGATC	1 cut(s)	794
BspT107I	GGYRCC	2 cut(s)	67, 1424
BspTNI	GGTCTC	1 cut(s)	1613
BsrDI	GCAATG	1 cut(s)	860
BsrGI	TGTACA	2 cut(s)	216, 646
BsrI	ACTGG	1 cut(s)	759
BssECI	CCNNGG	8 cut(s)	63, 288, 543, 597, 1317, 1518, 1766, 1933
BssMI	GATC	4 cut(s)	54, 624, 799, 1431
BssNI	GRCGYC	1 cut(s)	1748
BssT1I	CCWWGG	5 cut(s)	288, 543, 597, 1317, 1518
Bst2UI	CCWGG	4 cut(s)	64, 1130, 1904, 1935
Bst4CI	ACNGT	4 cut(s)	216, 407, 468, 533
Bst6I	CTCTTC	4 cut(s)	753, 1221, 1326, 1559
BstACI	GRCGYC	1 cut(s)	1748
BstAPI	GCANNNNNTGC	4 cut(s)	14, 557, 1154, 1715
BstAUI	TGTACA	2 cut(s)	216, 646
BstC8I	GCNNGC	5 cut(s)	177, 675, 702, 1074, 1126
BstDSI	CCRYGG	2 cut(s)	1518, 1766
BstENI	CCTNNNNNAGG	1 cut(s)	1564
BstF5I	GGATG	5 cut(s)	539, 730, 1453, 1760, 1841
BstFNI	CGCG	2 cut(s)	677, 1652
BstKTI	GATC	4 cut(s)	57, 627, 802, 1434
BstMAI	GTCTC	4 cut(s)	179, 1303, 1613, 1739
BstMBI	GATC	4 cut(s)	54, 624, 799, 1431
BstNI	CCWGG	4 cut(s)	64, 1130, 1904, 1935
BstNSI	RCATGY	4 cut(s)	1037, 1091, 1128, 1885
BstSCI	CCNGG	5 cut(s)	62, 1128, 1817, 1902, 1933
BstSLI	GKGCMC	2 cut(s)	70, 1360
BstUI	CGCG	2 cut(s)	677, 1652
BstV2I	GAAGAC	1 cut(s)	152
BstX2I	RGATCY	1 cut(s)	624
BstYI	RGATCY	1 cut(s)	624
Bsu36I	CCTNAGG	1 cut(s)	36
BsuI	GTATCC	1 cut(s)	1722
BsuRI	GGCC	5 cut(s)	203, 602, 1358, 1559, 1817
BtgI	CCRYGG	2 cut(s)	1518, 1766
BtsCI	GGATG	5 cut(s)	539, 730, 1453, 1760, 1841
BtsI	GCAGTG	2 cut(s)	1668, 1721
BtsIMutI	CAGTG	6 cut(s)	337, 752, 947, 1668, 1721, 1758
BveI	ACCTGC	2 cut(s)	142, 562
Cac8I	GCNNGC	5 cut(s)	177, 675, 702, 1074, 1126
CaiI	CAGNNNCTG	2 cut(s)	368, 584
Cfr13I	GGNCC	4 cut(s)	202, 1356, 1357, 1816
CseI	GACGC	1 cut(s)	666
CsiI	ACCWGGT	1 cut(s)	1902
Csp6I	GTAC	4 cut(s)	217, 469, 647, 750
CspCI	CAANNNNNGTGG	2 cut(s)	1261, 1296
CviAII	CATG	6 cut(s)	472, 1034, 1088, 1125, 1519, 1882
CviQI	GTAC	4 cut(s)	217, 469, 647, 750
DpnI	GATC	4 cut(s)	56, 626, 801, 1433
DpnII	GATC	4 cut(s)	54, 624, 799, 1431
Eam1104I	CTCTTC	4 cut(s)	753, 1221, 1326, 1559
EarI	CTCTTC	4 cut(s)	753, 1221, 1326, 1559
Ecl136II	GAGCTC	1 cut(s)	1675
Eco130I	CCWWGG	5 cut(s)	288, 543, 597, 1317, 1518
Eco147I	AGGCCT	1 cut(s)	1559
Eco24I	GRGCYC	2 cut(s)	1360, 1677
Eco31I	GGTCTC	1 cut(s)	1613
Eco53kI	GAGCTC	1 cut(s)	1675
Eco57I	CTGAAG	5 cut(s)	257, 606, 1064, 1179, 1665
Eco81I	CCTNAGG	1 cut(s)	36
Eco88I	CYCGRG	1 cut(s)	121
EcoICRI	GAGCTC	1 cut(s)	1675
EcoNI	CCTNNNNNAGG	1 cut(s)	1564
EcoO109I	RGGNCCY	2 cut(s)	1356, 1357
EcoRI	GAATTC	1 cut(s)	1779
EcoRII	CCWGG	4 cut(s)	62, 1128, 1902, 1933
EcoT14I	CCWWGG	5 cut(s)	288, 543, 597, 1317, 1518
EcoT22I	ATGCAT	1 cut(s)	541
EcoT38I	GRGCYC	2 cut(s)	1360, 1677
ErhI	CCWWGG	5 cut(s)	288, 543, 597, 1317, 1518
Esp3I	CGTCTC	1 cut(s)	1739
FaeI	CATG	6 cut(s)	475, 1037, 1091, 1128, 1522, 1885
FalI	AAGNNNNNCTT	8 cut(s)	816, 848, 904, 936, 1141, 1173, 1847, 1879
FatI	CATG	6 cut(s)	471, 1033, 1087, 1124, 1518, 1881
FauI	CCCGC	1 cut(s)	412
FokI	GGATG	5 cut(s)	526, 737, 1460, 1747, 1828
FriOI	GRGCYC	2 cut(s)	1360, 1677
FspBI	CTAG	6 cut(s)	30, 176, 278, 813, 1401, 1545
GsaI	CCCAGC	2 cut(s)	694, 1080
HaeIII	GGCC	5 cut(s)	203, 602, 1358, 1559, 1817
HapII	CCGG	1 cut(s)	1819
HgaI	GACGC	1 cut(s)	666
Hin1I	GRCGYC	1 cut(s)	1748
Hin1II	CATG	6 cut(s)	475, 1037, 1091, 1128, 1522, 1885
HpaII	CCGG	1 cut(s)	1819
HphI	GGTGA	3 cut(s)	119, 331, 1949
Hpy166II	GTNNAC	1 cut(s)	752
Hpy188III	TCNNGA	7 cut(s)	299, 459, 527, 628, 803, 813, 821
Hpy8I	GTNNAC	1 cut(s)	752
HpyAV	CCTTC	9 cut(s)	104, 220, 1039, 1045, 1252, 1534, 1579, 1661, 1674
HpyCH4III	ACNGT	4 cut(s)	216, 407, 468, 533
HpyCH4IV	ACGT	1 cut(s)	1748
HpySE526I	ACGT	1 cut(s)	1748
Hsp92I	GRCGYC	1 cut(s)	1748
Hsp92II	CATG	6 cut(s)	475, 1037, 1091, 1128, 1522, 1885
Kzo9I	GATC	4 cut(s)	54, 624, 799, 1431
LmnI	GCTCC	7 cut(s)	274, 697, 857, 1009, 1680, 1696, 1922
LweI	GCATC	7 cut(s)	79, 526, 548, 580, 925, 1415, 1705
MabI	ACCWGGT	1 cut(s)	1902
MaeI	CTAG	6 cut(s)	30, 176, 278, 813, 1401, 1545
MaeII	ACGT	1 cut(s)	1748
MaeIII	GTNAC	2 cut(s)	510, 916
MalI	GATC	4 cut(s)	56, 626, 801, 1433
MboI	GATC	4 cut(s)	54, 624, 799, 1431
MfeI	CAATTG	1 cut(s)	657
MflI	RGATCY	1 cut(s)	624
MhlI	GDGCHC	4 cut(s)	70, 466, 1360, 1677
MluCI	AATT	9 cut(s)	294, 344, 493, 636, 657, 773, 1081, 1410, 1779
MlyI	GAGTC	4 cut(s)	770, 1427, 1466, 1490
MmeI	TCCRAC	2 cut(s)	28, 835
Mph1103I	ATGCAT	1 cut(s)	541
MseI	TTAA	4 cut(s)	84, 141, 492, 618
MslI	CAYNNNNRTG	1 cut(s)	476
MspA1I	CMGCKG	2 cut(s)	1712, 1878
MspI	CCGG	1 cut(s)	1819
MspR9I	CCNGG	5 cut(s)	64, 1130, 1819, 1904, 1935
MunI	CAATTG	1 cut(s)	657
Mva1269I	GAATGC	4 cut(s)	116, 247, 886, 1213
MvaI	CCWGG	4 cut(s)	64, 1130, 1904, 1935
MvnI	CGCG	2 cut(s)	677, 1652
NciI	CCSGG	1 cut(s)	1819
NcoI	CCATGG	1 cut(s)	1518
NdeII	GATC	4 cut(s)	54, 624, 799, 1431
NheI	GCTAGC	1 cut(s)	175
NlaIII	CATG	6 cut(s)	475, 1037, 1091, 1128, 1522, 1885
NlaIV	GGNNCC	4 cut(s)	69, 1358, 1426, 1918
NmuCI	GTSAC	1 cut(s)	916
NsiI	ATGCAT	1 cut(s)	541
NspI	RCATGY	4 cut(s)	1037, 1091, 1128, 1885
PaeI	GCATGC	1 cut(s)	1128
PceI	AGGCCT	1 cut(s)	1559
PciI	ACATGT	1 cut(s)	1087
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PctI	GAATGC	4 cut(s)	116, 247, 886, 1213
PfeI	GAWTC	8 cut(s)	398, 452, 653, 902, 944, 1067, 1139, 1757
PleI	GAGTC	4 cut(s)	769, 1426, 1465, 1489
PpsI	GAGTC	4 cut(s)	769, 1426, 1465, 1489
PscI	ACATGT	1 cut(s)	1087
Psp124BI	GAGCTC	1 cut(s)	1677
Psp6I	CCWGG	4 cut(s)	62, 1128, 1902, 1933
PspFI	CCCAGC	2 cut(s)	690, 1076
PspGI	CCWGG	4 cut(s)	62, 1128, 1902, 1933
PspN4I	GGNNCC	4 cut(s)	69, 1358, 1426, 1918
PspOMI	GGGCCC	1 cut(s)	1356
PspPI	GGNCC	4 cut(s)	202, 1356, 1357, 1816
PstNI	CAGNNNCTG	2 cut(s)	368, 584
PsuI	RGATCY	1 cut(s)	624
PvuII	CAGCTG	1 cut(s)	1712
RsaI	GTAC	4 cut(s)	218, 470, 648, 751
RsaNI	GTAC	4 cut(s)	217, 469, 647, 750
RseI	CAYNNNNRTG	1 cut(s)	476
SacI	GAGCTC	1 cut(s)	1677
SaqAI	TTAA	4 cut(s)	84, 141, 492, 618
Sau3AI	GATC	4 cut(s)	54, 624, 799, 1431
Sau96I	GGNCC	4 cut(s)	202, 1356, 1357, 1816
SchI	GAGTC	4 cut(s)	770, 1427, 1466, 1490
ScrFI	CCNGG	5 cut(s)	64, 1130, 1819, 1904, 1935
SduI	GDGCHC	4 cut(s)	70, 466, 1360, 1677
SexAI	ACCWGGT	1 cut(s)	1902
SfaNI	GCATC	7 cut(s)	79, 526, 548, 580, 925, 1415, 1705
SmiMI	CAYNNNNRTG	1 cut(s)	476
SmlI	CTYRAG	3 cut(s)	299, 1001, 1013
SmoI	CTYRAG	3 cut(s)	299, 1001, 1013
SphI	GCATGC	1 cut(s)	1128
Sse9I	AATT	9 cut(s)	294, 344, 493, 636, 657, 773, 1081, 1410, 1779
SseBI	AGGCCT	1 cut(s)	1559
SsiI	CCGC	8 cut(s)	419, 1099, 1176, 1344, 1650, 1726, 1878, 1914
SspMI	CTAG	6 cut(s)	30, 176, 278, 813, 1401, 1545
SstI	GAGCTC	1 cut(s)	1677
StuI	AGGCCT	1 cut(s)	1559
StyD4I	CCNGG	5 cut(s)	62, 1128, 1817, 1902, 1933
StyI	CCWWGG	5 cut(s)	288, 543, 597, 1317, 1518
TaaI	ACNGT	4 cut(s)	216, 407, 468, 533
TaiI	ACGT	1 cut(s)	1751
TaqI	TCGA	3 cut(s)	57, 629, 1908
TasI	AATT	9 cut(s)	294, 344, 493, 636, 657, 773, 1081, 1410, 1779
TatI	WGTACW	3 cut(s)	216, 468, 646
TauI	GCSGC	5 cut(s)	1178, 1346, 1652, 1881, 1917
TfiI	GAWTC	8 cut(s)	398, 452, 653, 902, 944, 1067, 1139, 1757
Tru1I	TTAA	4 cut(s)	84, 141, 492, 618
Tru9I	TTAA	4 cut(s)	84, 141, 492, 618
TscAI	CASTG	6 cut(s)	337, 759, 954, 1668, 1728, 1758
TseFI	GTSAC	1 cut(s)	916
Tsp45I	GTSAC	1 cut(s)	916
TspDTI	ATGAA	5 cut(s)	185, 864, 1179, 1247, 1517
TspGWI	ACGGA	1 cut(s)	512
TspRI	CASTG	6 cut(s)	337, 759, 954, 1668, 1728, 1758
XagI	CCTNNNNNAGG	1 cut(s)	1564
XapI	RAATTY	4 cut(s)	344, 636, 1081, 1779
XbaI	TCTAGA	1 cut(s)	812
XceI	RCATGY	4 cut(s)	1037, 1091, 1128, 1885
XcmI	CCANNNNNNNNNTGG	2 cut(s)	604, 1525
XspI	CTAG	6 cut(s)	30, 176, 278, 813, 1401, 1545
ZraI	GACGTC	1 cut(s)	1749
Zsp2I	ATGCAT	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.