MD11G1067900.v1.1

N-acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0012341
Physical Location & Seq
Forward (+)
5848192 .. 5849680
1489 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1067900.v1.1.491

Sequence Viewer

Length: 1179 bp
ATGGGATTTCAGGAGGCTATAATTCGAAGCTATGATGGGATGGTGGATAGAGGAAGAGTGGAAGATCTCGAGCGAAGGTGCGAAGTAGGGCCATCCGAACGTGTGTTTCTCTTCACAGACACGCTGGGTGACCCCATATGTAGGATCCGAAACAGTCCGATGCACAAGATGCTGGTGGCGGAGTTGGATAACCAGTTGGTTGGGGTCATTCAAGGCTCTATAAAGGTGGTCACAATTCATAACAGCAAGTCACCACCTAATGATCAGGCCAAAGTTGGCTACATCTTAGGCCTTAGGGTTTCGCCTCTTTATAGAAGAAAAGGAATTGGGTCAAGCCTTGTGAGCAAATTAGAAGAATGGTTCACAGACAATGATGCTGATTATGCATACATGGCCACAGAGAAAGATAACCATGCGTCAGTCAGACTTTTCATGACCAAGTTTGGCTACATCAAGTTCCGAACGCCAGCGATTCTCGTGAACCCGGTTTGTTACAGTCCCCGTCACGTGTCTTCCGGCGTTGAGATTGCAAAATTGAAGGTTGAAGAAGCTGAATATCTCTACAGAAAGTGTATGGAAAATACTGAGTTTTTCCCTCATGATATAGATAAAGTGCTTGGGAATAATCTGAGTTTGGGGACTTGGCTGGCTTACCCTAGAGGAGAGTTGAAGGTTGGAGATTTTGGGGTAAATGGTCATTTACCTGACAGTTGGGCTATGCTTAGCGTATGGAATAGTGGGGAGCTTTTTAACCTGAGGCTAGGGAATGCACCCTTATCTTGCTTAATGTATGCAAAATGTTGGAAATGGATGGCTAGGGTTTTTCCTTGCTTTAAATTACTGCCTTCCATGCCTGATTTTTTTACCCCTTTTGGATTTTACTTCATGTATGGGTTGCACCATGGAGGACCATTGTCAGGGAAATTGGTGAGGGCTCTTTGCCAGTTTGTACACAACATGGCTGCTACCACTTCAGAGAATTGCAAGGTTATAGTGACAGAAGTTGGGGGCTGTGATCCAGTGAGACATCACATCCCACATTGGAAATTGCTCTCATGTTATGAAGATTTGTGGTGCATAAAGGCCTTGAAAAATGAAGATAGAAGAACTAACGGCCTCCATGAATTGACAAAAACCCACCCAACAAAATCTCTCTTTGTAGATCCAAGAGAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

393

Amino Acids

44.59

Weight (kDa)

8.36

Isoelectric Point (pI)

39.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 53 - 150 8.9e-17 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 55 - 151 7.1e-08 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012341)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30090
fragaria_vesca FvH4_3g39120 FvH4_3g39120
malus_domestica MD03G1064100.v1.1 MD11G1067900.v1.1
prunus_persica Prupe.6G053400_v2.0.a1
pyrus_communis pycom03g05160 pycom11g05700
rosa_chinensis RchiOBHm_Chr5g0070491
rosa_laevigata RLG00000036137
rosa_multiflora Rmu_sc0005708.1_g000009
rosa_roxburghii Rroxscaffold_1G00010740
rosa_rugosa Rorug05G0406200 Rorug05G0406300
rosa_samantha Rh5AG461400 Rh5BG479700 Rh5CG503900 Rh5DG492000
rosa_wichuraiana Rw5G043020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 179
AclWI GGATC 4 cut(s) 139, 152, 1010, 1157
AcoI YGGCCR 1 cut(s) 393
AcuI CTGAAG 1 cut(s) 957
AcvI CACGTG 1 cut(s) 508
AfaI GTAC 1 cut(s) 951
AfiI CCNNNNNNNGG 2 cut(s) 141, 917
AflIII ACRYGT 2 cut(s) 100, 507
AgsI TTSAA 5 cut(s) 212, 538, 545, 670, 1090
AluBI AGCT 3 cut(s) 30, 551, 745
AluI AGCT 3 cut(s) 30, 551, 745
Alw26I GTCTC 1 cut(s) 1018
AlwI GGATC 4 cut(s) 139, 152, 1010, 1157
Ama87I CYCGRG 1 cut(s) 68
AoxI GGCC 6 cut(s) 89, 267, 289, 393, 1083, 1114
ApeKI GCWGC 1 cut(s) 962
AspS9I GGNCC 2 cut(s) 89, 908
AsuC2I CCSGG 1 cut(s) 485
AsuHPI GGTGA 3 cut(s) 140, 243, 940
AsuII TTCGAA 1 cut(s) 25
AvaI CYCGRG 1 cut(s) 68
AvaII GGWCC 1 cut(s) 908
AxyI CCTNAGG 2 cut(s) 293, 755
BalI TGGCCA 1 cut(s) 395
BamHI GGATCC 1 cut(s) 144
BanII GRGCYC 1 cut(s) 937
BauI CACGAG 1 cut(s) 476
BbrPI CACGTG 1 cut(s) 508
BbsI GAAGAC 1 cut(s) 504
BbvI GCAGC 1 cut(s) 949
BccI CCATC 4 cut(s) 29, 34, 100, 805
BceAI ACGGC 1 cut(s) 1129
BclI TGATCA 1 cut(s) 262
BcnI CCSGG 1 cut(s) 485
BcoDI GTCTC 1 cut(s) 1018
BfaI CTAG 3 cut(s) 657, 761, 816
BfmI CTRYAG 1 cut(s) 562
BglII AGATCT 1 cut(s) 64
BisI GCNGC 1 cut(s) 963
BlpI GCTNAGC 1 cut(s) 722
BlsI GCNGC 1 cut(s) 964
Bme1390I CCNGG 1 cut(s) 485
Bme18I GGWCC 1 cut(s) 908
BmeT110I CYCGRG 1 cut(s) 68
BmgT120I GGNCC 2 cut(s) 89, 908
BmiI GGNNCC 1 cut(s) 146
BmrFI CCNGG 1 cut(s) 485
BmsI GCATC 3 cut(s) 150, 159, 364
BoxI GACNNNNGTC 1 cut(s) 913
BpiI GAAGAC 1 cut(s) 504
Bpu1102I GCTNAGC 1 cut(s) 722
Bpu14I TTCGAA 1 cut(s) 25
BpuMI CCSGG 1 cut(s) 485
BsaAI YACGTR 1 cut(s) 508
BsaJI CCNNGG 1 cut(s) 901
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 917
Bse1I ACTGG 3 cut(s) 193, 943, 1019
Bse21I CCTNAGG 2 cut(s) 293, 755
BseDI CCNNGG 1 cut(s) 901
BseGI GGATG 4 cut(s) 45, 92, 816, 1032
BseLI CCNNNNNNNGG 2 cut(s) 141, 917
BseMII CTCAG 3 cut(s) 576, 620, 746
BseNI ACTGG 3 cut(s) 193, 943, 1019
BseRI GAGGAG 1 cut(s) 675
BseXI GCAGC 1 cut(s) 949
BseYI CCCAGC 1 cut(s) 124
BshFI GGCC 6 cut(s) 91, 269, 291, 395, 1085, 1116
BsiHKCI CYCGRG 1 cut(s) 68
BsiSI CCGG 2 cut(s) 485, 516
BslFI GGGAC 2 cut(s) 483, 652
BslI CCNNNNNNNGG 2 cut(s) 141, 917
BsmAI GTCTC 1 cut(s) 1018
BsmFI GGGAC 2 cut(s) 483, 652
BsmI GAATGC 1 cut(s) 772
BsnI GGCC 6 cut(s) 91, 269, 291, 395, 1085, 1116
BsoBI CYCGRG 1 cut(s) 68
Bsp119I TTCGAA 1 cut(s) 25
Bsp1286I GDGCHC 1 cut(s) 937
Bsp1407I TGTACA 1 cut(s) 949
Bsp143I GATC 5 cut(s) 64, 144, 262, 1015, 1162
Bsp1720I GCTNAGC 1 cut(s) 722
Bsp19I CCATGG 1 cut(s) 901
BspACI CCGC 1 cut(s) 179
BspANI GGCC 6 cut(s) 91, 269, 291, 395, 1085, 1116
BspCNI CTCAG 3 cut(s) 577, 621, 747
BspHI TCATGA 2 cut(s) 432, 598
BspLI GGNNCC 1 cut(s) 146
BspPI GGATC 4 cut(s) 139, 152, 1010, 1157
BspT104I TTCGAA 1 cut(s) 25
BsrGI TGTACA 1 cut(s) 949
BsrI ACTGG 3 cut(s) 193, 943, 1019
BssECI CCNNGG 1 cut(s) 901
BssMI GATC 5 cut(s) 64, 144, 262, 1015, 1162
BssSI CACGAG 1 cut(s) 476
BssT1I CCWWGG 1 cut(s) 901
Bst2BI CACGAG 1 cut(s) 476
Bst4CI ACNGT 3 cut(s) 155, 497, 710
Bst6I CTCTTC 2 cut(s) 49, 116
BstAPI GCANNNNNTGC 1 cut(s) 169
BstAUI TGTACA 1 cut(s) 949
BstBAI YACGTR 1 cut(s) 508
BstBI TTCGAA 1 cut(s) 25
BstC8I GCNNGC 2 cut(s) 468, 648
BstDEI CTNAG 6 cut(s) 286, 293, 585, 629, 722, 755
BstDSI CCRYGG 1 cut(s) 901
BstEII GGTNACC 1 cut(s) 128
BstF5I GGATG 4 cut(s) 45, 92, 816, 1032
BstKTI GATC 5 cut(s) 67, 147, 265, 1018, 1165
BstMAI GTCTC 1 cut(s) 1018
BstMBI GATC 5 cut(s) 64, 144, 262, 1015, 1162
BstMWI GCNNNNNNNGC 5 cut(s) 169, 342, 383, 392, 850
BstPAI GACNNNNGTC 1 cut(s) 913
BstPI GGTNACC 1 cut(s) 128
BstSCI CCNGG 1 cut(s) 483
BstSFI CTRYAG 1 cut(s) 562
BstV1I GCAGC 1 cut(s) 949
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 3 cut(s) 64, 144, 1162
BstXI CCANNNNNNTGG 1 cut(s) 200
BstYI RGATCY 3 cut(s) 64, 144, 1162
Bsu36I CCTNAGG 2 cut(s) 293, 755
BsuRI GGCC 6 cut(s) 91, 269, 291, 395, 1085, 1116
BtgI CCRYGG 1 cut(s) 901
BtsCI GGATG 4 cut(s) 45, 92, 816, 1032
BtsIMutI CAGTG 1 cut(s) 1026
Cac8I GCNNGC 2 cut(s) 468, 648
CciI TCATGA 2 cut(s) 432, 598
Cfr13I GGNCC 2 cut(s) 89, 908
CseI GACGC 1 cut(s) 405
Csp6I GTAC 1 cut(s) 950
CviQI GTAC 1 cut(s) 950
DdeI CTNAG 6 cut(s) 286, 293, 585, 629, 722, 755
DpnI GATC 5 cut(s) 66, 146, 264, 1017, 1164
DpnII GATC 5 cut(s) 64, 144, 262, 1015, 1162
DraI TTTAAA 1 cut(s) 835
EaeI YGGCCR 1 cut(s) 393
Eam1104I CTCTTC 2 cut(s) 49, 116
EarI CTCTTC 2 cut(s) 49, 116
EciI GGCGGA 1 cut(s) 194
Eco130I CCWWGG 1 cut(s) 901
Eco147I AGGCCT 2 cut(s) 291, 1085
Eco24I GRGCYC 1 cut(s) 937
Eco47I GGWCC 1 cut(s) 908
Eco57I CTGAAG 1 cut(s) 957
Eco72I CACGTG 1 cut(s) 508
Eco81I CCTNAGG 2 cut(s) 293, 755
Eco88I CYCGRG 1 cut(s) 68
Eco91I GGTNACC 1 cut(s) 128
EcoO65I GGTNACC 1 cut(s) 128
EcoT14I CCWWGG 1 cut(s) 901
EcoT22I ATGCAT 1 cut(s) 388
EcoT38I GRGCYC 1 cut(s) 937
ErhI CCWWGG 1 cut(s) 901
FaqI GGGAC 2 cut(s) 483, 652
FauNDI CATATG 1 cut(s) 137
FbaI TGATCA 1 cut(s) 262
Fnu4HI GCNGC 1 cut(s) 963
FokI GGATG 4 cut(s) 52, 79, 823, 1019
FriOI GRGCYC 1 cut(s) 937
Fsp4HI GCNGC 1 cut(s) 963
FspBI CTAG 3 cut(s) 657, 761, 816
GluI GCNGC 1 cut(s) 963
GsaI CCCAGC 1 cut(s) 128
HaeIII GGCC 6 cut(s) 91, 269, 291, 395, 1085, 1116
HapII CCGG 2 cut(s) 485, 516
HgaI GACGC 1 cut(s) 405
HinfI GANTC 1 cut(s) 472
HpaII CCGG 2 cut(s) 485, 516
HphI GGTGA 3 cut(s) 140, 243, 940
Hpy166II GTNNAC 3 cut(s) 363, 481, 952
Hpy188I TCNGA 7 cut(s) 97, 149, 159, 425, 461, 630, 976
Hpy188III TCNNGA 5 cut(s) 11, 68, 433, 478, 599
Hpy8I GTNNAC 3 cut(s) 363, 481, 952
HpyAV CCTTC 4 cut(s) 69, 532, 664, 855
HpyCH4III ACNGT 3 cut(s) 155, 497, 710
HpyCH4IV ACGT 2 cut(s) 100, 507
HpyCH4V TGCA 8 cut(s) 163, 386, 530, 770, 794, 898, 984, 1077
HpyF10VI GCNNNNNNNGC 5 cut(s) 169, 342, 383, 392, 850
HpyF3I CTNAG 6 cut(s) 286, 293, 585, 629, 722, 755
HpySE526I ACGT 2 cut(s) 100, 507
Ksp22I TGATCA 1 cut(s) 262
Kzo9I GATC 5 cut(s) 64, 144, 262, 1015, 1162
LmnI GCTCC 1 cut(s) 742
Lsp1109I GCAGC 1 cut(s) 949
LweI GCATC 3 cut(s) 150, 159, 364
MaeI CTAG 3 cut(s) 657, 761, 816
MaeII ACGT 2 cut(s) 100, 507
MaeIII GTNAC 6 cut(s) 128, 229, 249, 491, 503, 994
MalI GATC 5 cut(s) 66, 146, 264, 1017, 1164
MboI GATC 5 cut(s) 64, 144, 262, 1015, 1162
MflI RGATCY 3 cut(s) 64, 144, 1162
MhlI GDGCHC 1 cut(s) 937
MlsI TGGCCA 1 cut(s) 395
MluNI TGGCCA 1 cut(s) 395
MmeI TCCRAC 3 cut(s) 165, 655, 782
Mox20I TGGCCA 1 cut(s) 395
Mph1103I ATGCAT 1 cut(s) 388
MscI TGGCCA 1 cut(s) 395
MseI TTAA 3 cut(s) 750, 785, 834
Msp20I TGGCCA 1 cut(s) 395
MspI CCGG 2 cut(s) 485, 516
MspR9I CCNGG 1 cut(s) 485
Mva1269I GAATGC 1 cut(s) 772
MwoI GCNNNNNNNGC 5 cut(s) 169, 342, 383, 392, 850
NciI CCSGG 1 cut(s) 485
NcoI CCATGG 1 cut(s) 901
NdeI CATATG 1 cut(s) 137
NdeII GATC 5 cut(s) 64, 144, 262, 1015, 1162
NlaIV GGNNCC 1 cut(s) 146
NmuCI GTSAC 5 cut(s) 128, 229, 249, 503, 994
NsiI ATGCAT 1 cut(s) 388
NspV TTCGAA 1 cut(s) 25
PaeR7I CTCGAG 1 cut(s) 68
PagI TCATGA 2 cut(s) 432, 598
PceI AGGCCT 2 cut(s) 291, 1085
PctI GAATGC 1 cut(s) 772
PfeI GAWTC 1 cut(s) 472
PkrI GCNGC 1 cut(s) 964
PmaCI CACGTG 1 cut(s) 508
PmlI CACGTG 1 cut(s) 508
Ppu21I YACGTR 1 cut(s) 508
PshAI GACNNNNGTC 1 cut(s) 913
PspCI CACGTG 1 cut(s) 508
PspEI GGTNACC 1 cut(s) 128
PspFI CCCAGC 1 cut(s) 124
PspN4I GGNNCC 1 cut(s) 146
PspPI GGNCC 2 cut(s) 89, 908
PsuI RGATCY 3 cut(s) 64, 144, 1162
RsaI GTAC 1 cut(s) 951
RsaNI GTAC 1 cut(s) 950
SaqAI TTAA 3 cut(s) 750, 785, 834
SatI GCNGC 1 cut(s) 963
Sau3AI GATC 5 cut(s) 64, 144, 262, 1015, 1162
Sau96I GGNCC 2 cut(s) 89, 908
ScrFI CCNGG 1 cut(s) 485
SduI GDGCHC 1 cut(s) 937
SfaNI GCATC 3 cut(s) 150, 159, 364
SfcI CTRYAG 1 cut(s) 562
Sfr274I CTCGAG 1 cut(s) 68
SfuI TTCGAA 1 cut(s) 25
SinI GGWCC 1 cut(s) 908
SlaI CTCGAG 1 cut(s) 68
SmlI CTYRAG 1 cut(s) 68
SmoI CTYRAG 1 cut(s) 68
SseBI AGGCCT 2 cut(s) 291, 1085
SsiI CCGC 1 cut(s) 179
SspMI CTAG 3 cut(s) 657, 761, 816
StuI AGGCCT 2 cut(s) 291, 1085
StyD4I CCNGG 1 cut(s) 483
StyI CCWWGG 1 cut(s) 901
TaaI ACNGT 3 cut(s) 155, 497, 710
TaiI ACGT 2 cut(s) 103, 510
TaqI TCGA 2 cut(s) 25, 69
TatI WGTACW 1 cut(s) 949
TfiI GAWTC 1 cut(s) 472
Tru1I TTAA 3 cut(s) 750, 785, 834
Tru9I TTAA 3 cut(s) 750, 785, 834
TscAI CASTG 1 cut(s) 1026
TseFI GTSAC 5 cut(s) 128, 229, 249, 503, 994
TseI GCWGC 1 cut(s) 962
Tsp45I GTSAC 5 cut(s) 128, 229, 249, 503, 994
TspDTI ATGAA 6 cut(s) 227, 421, 874, 1077, 1110, 1137
TspRI CASTG 1 cut(s) 1026
VpaK11BI GGWCC 1 cut(s) 908
XhoI CTCGAG 1 cut(s) 68
XspI CTAG 3 cut(s) 657, 761, 816
Zsp2I ATGCAT 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.