Prupe.6G053400_v2.0.a1

N-acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0012341
Physical Location & Seq
Reverse (-)
3751354 .. 3752683
1330 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G053400.1

Sequence Viewer

Length: 1188 bp
ATGGGAATTCAGGAGCCGATAATTCGAAGCTATGATGGGGTGGCTGACAGAGGCAGAGTGGAAGATCTTGAACGAAGATGCGAAGTAGGGCCATCTGAGCGTGTGTTCCTCTTCACAGATACGATGGGTGACCCCATATGTAGAATCCGAAACAGTCCGATGCACAAGATGCTGGTGGCCGAGCTGGACAACCAATTGGTCGGGGTCATCCAAGGCTCTATAAAGTTGGTCACATTTCATCCCAACAAGCCACCACCTAAAGATCAAGCCAAGGTAGGCTACCTCTTAGGCCTGAGGGTCTCGCCGCTGTACAGAAGAAAAGGGATTGGTTCGAGCCTCGTGCGTCGATTAGAAGAATGGTTCGTTTGCAATGATGTAGATTATGCATACATGGCCACGGAGAAAGATAACCAGGCCTCAGCCGGGCTTTTCATGAACAAATTTGGCTACATCAAGTTCAGGACCCCGGCTATTCTTGTGAACCCGGTTCGCTACAGGCCGTGTCGGGTGTCTTCGGGTGTCGAAATTGCAAAGCTGAGGATTGAGGAAGCTGAGTATCTTTACAGAAAGTGTATGGCTTCCACTGAGTTTTTTTCACATGACATAGATAAAGTGCTTGGAAATAAGCTGAGTTTGGGGACTTGGGTGGCTTATCCAAGAGGAGATGGGTTGAGGGTTGGAGATTTTGGGTCAAATGGTGATGAGGTGGTGCCTAGCAATTGGGCCATGCTTAGTGTATGGAACAGTGGGGAGCTTTTTAACCTGAGGCTAGGGAAAGCACCCTTATCTTGCTTCATGTATGCAAAAAGTTGGAAATTGATGGATAGGTTTTTACCCTGCTTTAAATTACTGCCTTCCATGCCTGATTTTTTTGCCCCTTTTGGGTTTTACTTCATGTATGGCTTGCACCATGAAGGACCCTTGTCAGGGAAATTGGTGAGGAATTTGTGCCAGTTTGTCCACAACATGGCTGCTAATAGTAGTTCAGAGTATAGCTCTAAGAATTGCAAGGTTGTAGTGACAGAAGTTGGGGGCTGTGATCCAGTGAAACATTACATACCACATTGGAAATTGCTCTCTTGTTCTGAAGATTTGTGGTGCATAAAACCCTTGAAAAATGATAGCCTCCATGAACTGACAAAAACCCACCCAACAAAATCTCTTTTTGTAGACCCAAGAGAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

396

Amino Acids

44.86

Weight (kDa)

8.79

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012341)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30090
fragaria_vesca FvH4_3g39120 FvH4_3g39120
malus_domestica MD03G1064100.v1.1 MD11G1067900.v1.1
prunus_persica Prupe.6G053400_v2.0.a1
pyrus_communis pycom03g05160 pycom11g05700
rosa_chinensis RchiOBHm_Chr5g0070491
rosa_laevigata RLG00000036137
rosa_multiflora Rmu_sc0005708.1_g000009
rosa_roxburghii Rroxscaffold_1G00010740
rosa_rugosa Rorug05G0406200 Rorug05G0406300
rosa_samantha Rh5AG461400 Rh5BG479700 Rh5CG503900 Rh5DG492000
rosa_wichuraiana Rw5G043020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 709
AccB7I CCANNNNNTGG 1 cut(s) 967
AccI GTMKAC 1 cut(s) 1170
AciI CCGC 1 cut(s) 305
AclWI GGATC 1 cut(s) 1034
AcoI YGGCCR 2 cut(s) 177, 393
AcsI RAATTY 3 cut(s) 6, 440, 943
AcuI CTGAAG 1 cut(s) 1107
AfaI GTAC 1 cut(s) 311
AfiI CCNNNNNNNGG 6 cut(s) 423, 882, 926, 927, 967, 1180
AgsI TTSAA 2 cut(s) 71, 1114
AjnI CCWGG 1 cut(s) 411
AluBI AGCT 7 cut(s) 30, 184, 535, 551, 628, 754, 996
AluI AGCT 7 cut(s) 30, 184, 535, 551, 628, 754, 996
Alw26I GTCTC 1 cut(s) 304
AlwI GGATC 1 cut(s) 1034
AoxI GGCC 7 cut(s) 89, 177, 289, 393, 414, 497, 723
ApeKI GCWGC 1 cut(s) 971
ApoI RAATTY 3 cut(s) 6, 440, 943
AspS9I GGNCC 4 cut(s) 89, 462, 723, 917
AsuC2I CCSGG 3 cut(s) 424, 467, 485
AsuHPI GGTGA 3 cut(s) 140, 710, 949
AsuII TTCGAA 1 cut(s) 25
AvaII GGWCC 2 cut(s) 462, 917
AxyI CCTNAGG 2 cut(s) 293, 764
BalI TGGCCA 1 cut(s) 395
BanI GGYRCC 1 cut(s) 709
BauI CACGAG 1 cut(s) 338
BbsI GAAGAC 1 cut(s) 504
BbvCI CCTCAGC 2 cut(s) 418, 536
BbvI GCAGC 1 cut(s) 958
BccI CCATC 5 cut(s) 29, 100, 118, 659, 814
BceAI ACGGC 1 cut(s) 484
BcgI CGANNNNNNTGC 2 cut(s) 322, 356
BciT130I CCWGG 1 cut(s) 413
BcnI CCSGG 3 cut(s) 424, 467, 485
BcoDI GTCTC 1 cut(s) 304
BfaI CTAG 2 cut(s) 714, 770
BfmI CTRYAG 1 cut(s) 493
BglII AGATCT 1 cut(s) 64
BisI GCNGC 2 cut(s) 305, 972
BlsI GCNGC 2 cut(s) 306, 973
Bme1390I CCNGG 4 cut(s) 413, 424, 467, 485
Bme18I GGWCC 2 cut(s) 462, 917
BmgT120I GGNCC 4 cut(s) 89, 462, 723, 917
BmiI GGNNCC 4 cut(s) 15, 464, 711, 919
BmrFI CCNGG 4 cut(s) 413, 424, 467, 485
BmsI GCATC 3 cut(s) 68, 150, 159
BoxI GACNNNNGTC 1 cut(s) 922
BpiI GAAGAC 1 cut(s) 504
BplI GAGNNNNNCTC 2 cut(s) 980, 1012
Bpu10I CCTNAGC 2 cut(s) 418, 536
Bpu14I TTCGAA 1 cut(s) 25
BpuMI CCSGG 3 cut(s) 424, 467, 485
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 4 cut(s) 211, 270, 396, 465
Bsc4I CCNNNNNNNGG 6 cut(s) 423, 882, 926, 927, 967, 1180
Bse1I ACTGG 2 cut(s) 952, 1043
Bse21I CCTNAGG 2 cut(s) 293, 764
Bse3DI GCAATG 1 cut(s) 376
BseBI CCWGG 1 cut(s) 413
BseDI CCNNGG 4 cut(s) 211, 270, 396, 465
BseGI GGATG 2 cut(s) 207, 238
BseLI CCNNNNNNNGG 6 cut(s) 423, 882, 926, 927, 967, 1180
BseMI GCAATG 1 cut(s) 376
BseMII CTCAG 8 cut(s) 87, 284, 432, 527, 543, 576, 620, 755
BseNI ACTGG 2 cut(s) 952, 1043
BseRI GAGGAG 1 cut(s) 675
BseXI GCAGC 1 cut(s) 958
BshFI GGCC 7 cut(s) 91, 179, 291, 395, 416, 499, 725
BshNI GGYRCC 1 cut(s) 709
BsiSI CCGG 3 cut(s) 423, 467, 485
BslFI GGGAC 1 cut(s) 652
BslI CCNNNNNNNGG 6 cut(s) 423, 882, 926, 927, 967, 1180
BsmAI GTCTC 1 cut(s) 304
BsmFI GGGAC 1 cut(s) 652
BsnI GGCC 7 cut(s) 91, 179, 291, 395, 416, 499, 725
Bso31I GGTCTC 1 cut(s) 304
Bsp119I TTCGAA 1 cut(s) 25
Bsp1407I TGTACA 1 cut(s) 309
Bsp143I GATC 3 cut(s) 64, 262, 1039
BspACI CCGC 1 cut(s) 305
BspANI GGCC 7 cut(s) 91, 179, 291, 395, 416, 499, 725
BspCNI CTCAG 8 cut(s) 88, 285, 431, 528, 544, 577, 621, 756
BspHI TCATGA 1 cut(s) 432
BspLI GGNNCC 4 cut(s) 15, 464, 711, 919
BspPI GGATC 1 cut(s) 1034
BspT104I TTCGAA 1 cut(s) 25
BspT107I GGYRCC 1 cut(s) 709
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 1 cut(s) 376
BsrGI TGTACA 1 cut(s) 309
BsrI ACTGG 2 cut(s) 952, 1043
BssECI CCNNGG 4 cut(s) 211, 270, 396, 465
BssMI GATC 3 cut(s) 64, 262, 1039
BssSI CACGAG 1 cut(s) 338
BssT1I CCWWGG 2 cut(s) 211, 270
Bst2BI CACGAG 1 cut(s) 338
Bst2UI CCWGG 1 cut(s) 413
Bst4CI ACNGT 2 cut(s) 155, 746
Bst6I CTCTTC 1 cut(s) 116
BstAPI GCANNNNNTGC 1 cut(s) 169
BstAUI TGTACA 1 cut(s) 309
BstBI TTCGAA 1 cut(s) 25
BstC8I GCNNGC 1 cut(s) 905
BstDSI CCRYGG 1 cut(s) 396
BstEII GGTNACC 1 cut(s) 128
BstF5I GGATG 2 cut(s) 207, 238
BstKTI GATC 3 cut(s) 67, 265, 1042
BstMAI GTCTC 1 cut(s) 304
BstMBI GATC 3 cut(s) 64, 262, 1039
BstMWI GCNNNNNNNGC 4 cut(s) 97, 169, 392, 859
BstNI CCWGG 1 cut(s) 413
BstPAI GACNNNNGTC 1 cut(s) 922
BstPI GGTNACC 1 cut(s) 128
BstSCI CCNGG 4 cut(s) 411, 422, 465, 483
BstSFI CTRYAG 1 cut(s) 493
BstV1I GCAGC 1 cut(s) 958
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 1 cut(s) 64
BstYI RGATCY 1 cut(s) 64
Bsu36I CCTNAGG 2 cut(s) 293, 764
BsuRI GGCC 7 cut(s) 91, 179, 291, 395, 416, 499, 725
BtgI CCRYGG 1 cut(s) 396
BtsCI GGATG 2 cut(s) 207, 238
BtsIMutI CAGTG 3 cut(s) 582, 751, 1050
Cac8I GCNNGC 1 cut(s) 905
CciI TCATGA 1 cut(s) 432
Cfr13I GGNCC 4 cut(s) 89, 462, 723, 917
CseI GACGC 1 cut(s) 332
Csp6I GTAC 1 cut(s) 310
CviQI GTAC 1 cut(s) 310
DpnI GATC 3 cut(s) 66, 264, 1041
DpnII GATC 3 cut(s) 64, 262, 1039
DraI TTTAAA 1 cut(s) 844
EaeI YGGCCR 2 cut(s) 177, 393
Eam1104I CTCTTC 1 cut(s) 116
EarI CTCTTC 1 cut(s) 116
Eco130I CCWWGG 2 cut(s) 211, 270
Eco147I AGGCCT 2 cut(s) 291, 416
Eco31I GGTCTC 1 cut(s) 304
Eco47I GGWCC 2 cut(s) 462, 917
Eco57I CTGAAG 1 cut(s) 1107
Eco81I CCTNAGG 2 cut(s) 293, 764
Eco91I GGTNACC 1 cut(s) 128
EcoO109I RGGNCCY 2 cut(s) 462, 917
EcoO65I GGTNACC 1 cut(s) 128
EcoRI GAATTC 1 cut(s) 6
EcoRII CCWGG 1 cut(s) 411
EcoT14I CCWWGG 2 cut(s) 211, 270
EcoT22I ATGCAT 1 cut(s) 388
ErhI CCWWGG 2 cut(s) 211, 270
FaqI GGGAC 1 cut(s) 652
FauNDI CATATG 1 cut(s) 137
FblI GTMKAC 1 cut(s) 1170
Fnu4HI GCNGC 2 cut(s) 305, 972
FokI GGATG 2 cut(s) 194, 225
Fsp4HI GCNGC 2 cut(s) 305, 972
FspBI CTAG 2 cut(s) 714, 770
GluI GCNGC 2 cut(s) 305, 972
HaeIII GGCC 7 cut(s) 91, 179, 291, 395, 416, 499, 725
HapII CCGG 3 cut(s) 423, 467, 485
HgaI GACGC 1 cut(s) 332
HinfI GANTC 1 cut(s) 144
HpaII CCGG 3 cut(s) 423, 467, 485
HphI GGTGA 3 cut(s) 140, 710, 949
Hpy166II GTNNAC 3 cut(s) 481, 961, 1171
Hpy188I TCNGA 5 cut(s) 97, 149, 159, 988, 1087
Hpy188III TCNNGA 4 cut(s) 11, 68, 433, 460
Hpy8I GTNNAC 3 cut(s) 481, 961, 1171
Hpy99I CGWCG 1 cut(s) 348
HpyAV CCTTC 2 cut(s) 864, 908
HpyCH4III ACNGT 2 cut(s) 155, 746
HpyCH4V TGCA 8 cut(s) 163, 369, 386, 530, 803, 907, 1008, 1101
HpyF10VI GCNNNNNNNGC 4 cut(s) 97, 169, 392, 859
Kzo9I GATC 3 cut(s) 64, 262, 1039
LmnI GCTCC 2 cut(s) 13, 751
Lsp1109I GCAGC 1 cut(s) 958
LweI GCATC 3 cut(s) 68, 150, 159
MaeI CTAG 2 cut(s) 714, 770
MaeIII GTNAC 3 cut(s) 128, 229, 1018
MalI GATC 3 cut(s) 66, 264, 1041
MboI GATC 3 cut(s) 64, 262, 1039
MboII GAAGA 7 cut(s) 74, 87, 103, 327, 365, 504, 1100
MfeI CAATTG 2 cut(s) 194, 718
MflI RGATCY 1 cut(s) 64
MlsI TGGCCA 1 cut(s) 395
MluNI TGGCCA 1 cut(s) 395
MmeI TCCRAC 2 cut(s) 658, 791
Mox20I TGGCCA 1 cut(s) 395
Mph1103I ATGCAT 1 cut(s) 388
MscI TGGCCA 1 cut(s) 395
MseI TTAA 2 cut(s) 759, 843
Msp20I TGGCCA 1 cut(s) 395
MspA1I CMGCKG 1 cut(s) 307
MspI CCGG 3 cut(s) 423, 467, 485
MspR9I CCNGG 4 cut(s) 413, 424, 467, 485
MunI CAATTG 2 cut(s) 194, 718
MvaI CCWGG 1 cut(s) 413
MwoI GCNNNNNNNGC 4 cut(s) 97, 169, 392, 859
NciI CCSGG 3 cut(s) 424, 467, 485
NdeI CATATG 1 cut(s) 137
NdeII GATC 3 cut(s) 64, 262, 1039
NlaIV GGNNCC 4 cut(s) 15, 464, 711, 919
NmeAIII GCCGAG 1 cut(s) 205
NmuCI GTSAC 3 cut(s) 128, 229, 1018
NsiI ATGCAT 1 cut(s) 388
NspV TTCGAA 1 cut(s) 25
PagI TCATGA 1 cut(s) 432
PceI AGGCCT 2 cut(s) 291, 416
PfeI GAWTC 1 cut(s) 144
PflMI CCANNNNNTGG 1 cut(s) 967
PkrI GCNGC 2 cut(s) 306, 973
PpuMI RGGWCCY 2 cut(s) 462, 917
PshAI GACNNNNGTC 1 cut(s) 922
Psp5II RGGWCCY 2 cut(s) 462, 917
Psp6I CCWGG 1 cut(s) 411
PspEI GGTNACC 1 cut(s) 128
PspGI CCWGG 1 cut(s) 411
PspN4I GGNNCC 4 cut(s) 15, 464, 711, 919
PspPI GGNCC 4 cut(s) 89, 462, 723, 917
PspPPI RGGWCCY 2 cut(s) 462, 917
PsuI RGATCY 1 cut(s) 64
RsaI GTAC 1 cut(s) 311
RsaNI GTAC 1 cut(s) 310
SaqAI TTAA 2 cut(s) 759, 843
SatI GCNGC 2 cut(s) 305, 972
Sau3AI GATC 3 cut(s) 64, 262, 1039
Sau96I GGNCC 4 cut(s) 89, 462, 723, 917
ScrFI CCNGG 4 cut(s) 413, 424, 467, 485
SfaNI GCATC 3 cut(s) 68, 150, 159
SfcI CTRYAG 1 cut(s) 493
SfuI TTCGAA 1 cut(s) 25
SinI GGWCC 2 cut(s) 462, 917
SseBI AGGCCT 2 cut(s) 291, 416
SsiI CCGC 1 cut(s) 305
SspMI CTAG 2 cut(s) 714, 770
StuI AGGCCT 2 cut(s) 291, 416
StyD4I CCNGG 4 cut(s) 411, 422, 465, 483
StyI CCWWGG 2 cut(s) 211, 270
TaaI ACNGT 2 cut(s) 155, 746
TaqI TCGA 4 cut(s) 25, 332, 346, 522
TatI WGTACW 1 cut(s) 309
TauI GCSGC 1 cut(s) 307
TfiI GAWTC 1 cut(s) 144
Tru1I TTAA 2 cut(s) 759, 843
Tru9I TTAA 2 cut(s) 759, 843
TscAI CASTG 3 cut(s) 589, 751, 1050
TseFI GTSAC 3 cut(s) 128, 229, 1018
TseI GCWGC 1 cut(s) 971
Tsp45I GTSAC 3 cut(s) 128, 229, 1018
TspDTI ATGAA 7 cut(s) 227, 421, 449, 784, 883, 927, 1146
TspGWI ACGGA 1 cut(s) 413
TspRI CASTG 3 cut(s) 589, 751, 1050
Van91I CCANNNNNTGG 1 cut(s) 967
VpaK11BI GGWCC 2 cut(s) 462, 917
XapI RAATTY 3 cut(s) 6, 440, 943
XmiI GTMKAC 1 cut(s) 1170
XspI CTAG 2 cut(s) 714, 770
Zsp2I ATGCAT 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.