MD11G1107600.v1.1

Glucan endo-1,3-beta-glucosidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0016534
Physical Location & Seq
Forward (+)
9489487 .. 9491713
2227 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1107600.v1.1.491

Sequence Viewer

Length: 1542 bp
ATGGAGCCACCACTCAAGCTCTCCCTCCTCCCTCTCCTCCTCTTCTCCGCCTGTCATGTCATCCTCCACACCACCGCTTACTCCATCGGCGTCAACTACGGCACCATAGCAGACAACCTCCCGCCGCCCTCCAAAGTCGCCACGTTTCTCAAGACCAAGACCACCATCGACCGCGTCAAGATCTTCGACGCCAACCCCGACATCCTCCGCGCCTTCGCCGGCACCAACATCGCTGTAACCGTCACTGTCGGAAACGGCGACGTTCCGGCCCTTGCCAAGCTCTCCGCGGCGCAGTCATGGGTGGCCGACAACATACTGCCGTTTCACCCGCGCACGACCATCAACCGAATCGCCGTGGGCAACGAAATCCTCGCCACGTCGGACAAGGACCTCATCGCGCACCTGCTGCCGGCTATGAAGTCACTCCACTCGGCGCTCGAGCTCGTGAACATCTCCTCCATTCAGGTTGGGACACCTAACTCTCTGGGAATTCTCGCCCCCAACACGGGCCCACCGAGTGAAGGCCGATTCCGAACGGGTTACGACCGAGTGGTTTTCACTCCGATGCTCGATTTCCACCGCCAGACCAAATCCCCGTTTCTGATCAACCCGTACCCGTTTTTCGGATCCGTTCCCGAGACTCTAAACTACGCGCTGTTCAAGCCAAACGGCGGCGTTTTCGACAACGCCACGGGGATGAACTACACGAACATGTTCGACGCCCAGATGGACGCGGTTTATACGGCGATGAAGAAGGTCGGTTACGAGGACGTGGACGTCGTGGTGGCCGAAACGGGTTGGCCCTCCGTAGGTGACCCGACCCAGCCCGATGCGACCGTCGACAATGCGGCATCGTATAACGGAAACCTCATCAAGCACGTGAGCTCAGGCAAAGGCACGCCGCTGATGCCGAACCGGACGTTCGAGACCTACATCTTCGCTCTGTTCAACGAGAATCTGAAGCCGTCGAAGTCGGAGCAGAATTACGGGTTGTTCAAACCCGACTTCAACCCGGTTTACGATGTGGGCATTTTGCGCAACCAACAGGCAGCGGCTCCCAAGTCGAGCGTGGCGGCTGGTCCCAAGTCGGGCGTGGCCGCCGGACCAAAGTCTGGAGTGGCGGAGGGGCCCACGCCCGGTGGAGCACAAGCACCGTCGCCGTCGGCGGGGAAGAGGTGGTGCGTGCCGAGATCGGACGCCTCGGACGCGGCGCTGCAGAAGAACATAGATTTCGTGTGCAGCAGTGGAGTGGACTGCAAGCCCATACAGGGAGGTGGGCCCTGTTTTCAGCCCAATACGGTGAAGTCACACGCTGCTTACGTCATGAACGCATATTACCAGGCGAATGGTCCGCAGGATTCCAACTGTGACTTCAAGCACACCGGAGTCGTCACCACCACTGATCCCAGTTACGATGCGTGCACGTACCCTTACAAGGCGGAGAAGTCCGAAAAGACGGTGGCGGGGGGTTCAATTAAAATGAAATGTGACAGAATGGCAGGGGTATTTATGATATTAGCCTCTTGTATAATGCTTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_17 X8

Protein Analysis

514

Amino Acids

54.77

Weight (kDa)

7.55

Isoelectric Point (pI)

35.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 29 - 342 5.1e-80 Glycosyl hydrolases family 17
X8 PF07983 393 - 462 4.8e-22 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46570
fragaria_vesca FvH4_3g36150
malus_domestica MD11G1107600.v1.1
prunus_persica Prupe.6G076900_v2.0.a1
pyrus_communis pycom11g08910
rosa_chinensis RchiOBHm_Chr5g0064591 RchiOBHm_Chr5g0064901
rosa_laevigata RLG00000035739
rosa_roxburghii Rroxscaffold_1G00016410
rosa_rugosa Rorug05G0366600
rosa_samantha Rh5AG424700 Rh5BG439700 Rh5DG453000
rosa_wichuraiana Rw5G039930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 411
AasI GACNNNNNNGTC 1 cut(s) 776
AatII GACGTC 1 cut(s) 780
Acc16I TGCGCA 1 cut(s) 1037
Acc36I ACCTGC 1 cut(s) 411
AccB1I GGYRCC 2 cut(s) 101, 221
AccB7I CCANNNNNTGG 1 cut(s) 1112
AccI GTMKAC 1 cut(s) 840
AccII CGCG 8 cut(s) 174, 210, 287, 331, 398, 653, 734, 1208
AclWI GGATC 3 cut(s) 621, 634, 1397
AcoI YGGCCR 3 cut(s) 303, 786, 1095
AcsI RAATTY 1 cut(s) 489
AcuI CTGAAG 1 cut(s) 980
AcvI CACGTG 1 cut(s) 880
AcyI GRCGYC 5 cut(s) 90, 189, 720, 777, 1197
AdeI CACNNNGTG 1 cut(s) 518
AfaI GTAC 2 cut(s) 614, 1427
AflIII ACRYGT 1 cut(s) 711
AgsI TTSAA 6 cut(s) 661, 949, 997, 1009, 1375, 1473
AjiI CACGTC 2 cut(s) 378, 772
AjnI CCWGG 1 cut(s) 1338
AjuI GAANNNNNNNTTGG 2 cut(s) 1355, 1387
AloI GAACNNNNNNTCC 2 cut(s) 440, 472
AluBI AGCT 4 cut(s) 19, 280, 442, 885
AluI AGCT 4 cut(s) 19, 280, 442, 885
Alw21I GWGCWC 4 cut(s) 444, 887, 1147, 1424
Alw26I GTCTC 2 cut(s) 632, 920
Alw44I GTGCAC 1 cut(s) 1420
AlwI GGATC 3 cut(s) 621, 634, 1397
Ama87I CYCGRG 2 cut(s) 437, 635
AoxI GGCC 9 cut(s) 267, 303, 508, 523, 786, 800, 1095, 1127, 1277
ApaI GGGCCC 3 cut(s) 512, 1131, 1281
ApaLI GTGCAC 1 cut(s) 1420
ApeKI GCWGC 5 cut(s) 406, 1049, 1213, 1239, 1313
ApoI RAATTY 1 cut(s) 489
Asp700I GAANNNNTTC 1 cut(s) 713
AspLEI GCGC 8 cut(s) 212, 292, 333, 400, 436, 655, 1038, 1213
AsuC2I CCSGG 2 cut(s) 1013, 1137
AsuHPI GGTGA 4 cut(s) 317, 824, 1312, 1384
AvaI CYCGRG 2 cut(s) 437, 635
AvaII GGWCC 4 cut(s) 388, 1079, 1103, 1349
BaeGI GKGCMC 4 cut(s) 512, 1131, 1281, 1424
BamHI GGATCC 1 cut(s) 626
BanI GGYRCC 2 cut(s) 101, 221
BanII GRGCYC 5 cut(s) 444, 512, 887, 1131, 1281
BarI GAAGNNNNNNTAC 2 cut(s) 746, 778
BauI CACGAG 1 cut(s) 443
BbrPI CACGTG 1 cut(s) 880
Bbv12I GWGCWC 4 cut(s) 444, 887, 1147, 1424
BbvI GCAGC 5 cut(s) 393, 1061, 1200, 1251, 1300
BccI CCATC 4 cut(s) 92, 173, 347, 721
BceAI ACGGC 8 cut(s) 115, 271, 304, 338, 685, 759, 949, 1144
BcgI CGANNNNNNTGC 2 cut(s) 211, 245
BciT130I CCWGG 1 cut(s) 1340
BclI TGATCA 1 cut(s) 603
BcnI CCSGG 2 cut(s) 1013, 1137
BcoDI GTCTC 2 cut(s) 632, 920
BfmI CTRYAG 1 cut(s) 1214
BfoI RGCGCY 2 cut(s) 437, 1214
BfuAI ACCTGC 1 cut(s) 411
BglII AGATCT 1 cut(s) 180
Bme1390I CCNGG 3 cut(s) 1013, 1137, 1340
Bme18I GGWCC 4 cut(s) 388, 1079, 1103, 1349
BmeT110I CYCGRG 2 cut(s) 437, 635
BmgBI CACGTC 2 cut(s) 378, 772
BmrFI CCNGG 3 cut(s) 1013, 1137, 1340
BmrI ACTGGG 1 cut(s) 1401
BmsI GCATC 5 cut(s) 555, 820, 860, 897, 1405
BmuI ACTGGG 1 cut(s) 1401
BoxI GACNNNNGTC 1 cut(s) 1108
BpmI CTGGAG 1 cut(s) 1134
Bpu10I CCTNAGC 1 cut(s) 886
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 2 cut(s) 1013, 1137
BsaAI YACGTR 2 cut(s) 880, 1425
BsaHI GRCGYC 5 cut(s) 90, 189, 720, 777, 1197
BsaI GGTCTC 1 cut(s) 920
BsaJI CCNNGG 4 cut(s) 285, 354, 690, 1200
BsaWI WCCGGW 2 cut(s) 915, 1382
BsaXI ACNNNNNCTCC 2 cut(s) 440, 470
Bse118I RCCGGY 2 cut(s) 218, 409
Bse1I ACTGG 1 cut(s) 1407
BseBI CCWGG 1 cut(s) 1340
BseDI CCNNGG 4 cut(s) 285, 354, 690, 1200
BseGI GGATG 3 cut(s) 60, 201, 702
BseMII CTCAG 1 cut(s) 900
BseNI ACTGG 1 cut(s) 1407
BseRI GAGGAG 4 cut(s) 17, 26, 29, 445
BseSI GKGCMC 4 cut(s) 512, 1131, 1281, 1424
BseXI GCAGC 5 cut(s) 393, 1061, 1200, 1251, 1300
BseYI CCCAGC 1 cut(s) 822
BsgI GTGCAG 1 cut(s) 1258
Bsh1236I CGCG 8 cut(s) 174, 210, 287, 331, 398, 653, 734, 1208
Bsh1285I CGRYCG 3 cut(s) 172, 547, 837
BshFI GGCC 9 cut(s) 269, 305, 510, 525, 788, 802, 1097, 1129, 1279
BshNI GGYRCC 2 cut(s) 101, 221
BsiEI CGRYCG 3 cut(s) 172, 547, 837
BsiHKAI GWGCWC 4 cut(s) 444, 887, 1147, 1424
BsiHKCI CYCGRG 2 cut(s) 437, 635
BsiSI CCGG 8 cut(s) 219, 266, 410, 916, 1013, 1101, 1137, 1383
BslFI GGGAC 2 cut(s) 484, 1065
BsmAI GTCTC 2 cut(s) 632, 920
BsmFI GGGAC 2 cut(s) 484, 1065
BsnI GGCC 9 cut(s) 269, 305, 510, 525, 788, 802, 1097, 1129, 1279
Bso31I GGTCTC 1 cut(s) 920
BsoBI CYCGRG 2 cut(s) 437, 635
Bsp120I GGGCCC 3 cut(s) 508, 1127, 1277
Bsp1286I GDGCHC 7 cut(s) 444, 512, 887, 1131, 1147, 1281, 1424
Bsp143I GATC 5 cut(s) 180, 603, 626, 1190, 1402
BspANI GGCC 9 cut(s) 269, 305, 510, 525, 788, 802, 1097, 1129, 1279
BspCNI CTCAG 1 cut(s) 899
BspFNI CGCG 8 cut(s) 174, 210, 287, 331, 398, 653, 734, 1208
BspHI TCATGA 1 cut(s) 1323
BspMAI CTGCAG 1 cut(s) 1218
BspMI ACCTGC 1 cut(s) 411
BspPI GGATC 3 cut(s) 621, 634, 1397
BspT107I GGYRCC 2 cut(s) 101, 221
BspTNI GGTCTC 1 cut(s) 920
BsrFI RCCGGY 2 cut(s) 218, 409
BsrI ACTGG 1 cut(s) 1407
BssAI RCCGGY 2 cut(s) 218, 409
BssECI CCNNGG 4 cut(s) 285, 354, 690, 1200
BssMI GATC 5 cut(s) 180, 603, 626, 1190, 1402
BssNI GRCGYC 5 cut(s) 90, 189, 720, 777, 1197
BssSI CACGAG 1 cut(s) 443
Bst2BI CACGAG 1 cut(s) 443
Bst2UI CCWGG 1 cut(s) 1340
Bst4CI ACNGT 7 cut(s) 241, 247, 838, 1155, 1300, 1367, 1459
Bst6I CTCTTC 2 cut(s) 47, 1166
BstACI GRCGYC 5 cut(s) 90, 189, 720, 777, 1197
BstAPI GCANNNNNTGC 1 cut(s) 406
BstBAI YACGTR 2 cut(s) 880, 1425
BstC8I GCNNGC 6 cut(s) 220, 411, 899, 1184, 1259, 1420
BstDEI CTNAG 1 cut(s) 886
BstDSI CCRYGG 3 cut(s) 285, 354, 690
BstEII GGTNACC 1 cut(s) 812
BstF5I GGATG 3 cut(s) 60, 201, 702
BstFNI CGCG 8 cut(s) 174, 210, 287, 331, 398, 653, 734, 1208
BstH2I RGCGCY 2 cut(s) 437, 1214
BstHHI GCGC 8 cut(s) 212, 292, 333, 400, 436, 655, 1038, 1213
BstKTI GATC 5 cut(s) 183, 606, 629, 1193, 1405
BstMAI GTCTC 2 cut(s) 632, 920
BstMBI GATC 5 cut(s) 180, 603, 626, 1190, 1402
BstMCI CGRYCG 3 cut(s) 172, 547, 837
BstMWI GCNNNNNNNGC 5 cut(s) 406, 661, 907, 1035, 1205
BstNI CCWGG 1 cut(s) 1340
BstNSI RCATGY 1 cut(s) 715
BstPAI GACNNNNGTC 1 cut(s) 1108
BstPI GGTNACC 1 cut(s) 812
BstSCI CCNGG 3 cut(s) 1011, 1135, 1338
BstSFI CTRYAG 1 cut(s) 1214
BstSLI GKGCMC 4 cut(s) 512, 1131, 1281, 1424
BstUI CGCG 8 cut(s) 174, 210, 287, 331, 398, 653, 734, 1208
BstV1I GCAGC 5 cut(s) 393, 1061, 1200, 1251, 1300
BstX2I RGATCY 2 cut(s) 180, 626
BstXI CCANNNNNNTGG 1 cut(s) 1346
BstYI RGATCY 2 cut(s) 180, 626
BsuRI GGCC 9 cut(s) 269, 305, 510, 525, 788, 802, 1097, 1129, 1279
BtgI CCRYGG 3 cut(s) 285, 354, 690
BtgZI GCGATG 3 cut(s) 214, 379, 761
BtrI CACGTC 2 cut(s) 378, 772
BtsCI GGATG 3 cut(s) 60, 201, 702
BtsI GCAGTG 1 cut(s) 1249
BtsIMutI CAGTG 3 cut(s) 243, 1249, 1398
BveI ACCTGC 1 cut(s) 411
Cac8I GCNNGC 6 cut(s) 220, 411, 899, 1184, 1259, 1420
CciI TCATGA 1 cut(s) 1323
CfoI GCGC 8 cut(s) 212, 292, 333, 400, 436, 655, 1038, 1213
Cfr10I RCCGGY 2 cut(s) 218, 409
Cfr42I CCGCGG 1 cut(s) 288
CseI GACGC 7 cut(s) 79, 163, 197, 728, 740, 1205, 1214
Csp6I GTAC 2 cut(s) 613, 1426
CviAII CATG 4 cut(s) 56, 297, 712, 1324
CviQI GTAC 2 cut(s) 613, 1426
DdeI CTNAG 1 cut(s) 886
DpnI GATC 5 cut(s) 182, 605, 628, 1192, 1404
DpnII GATC 5 cut(s) 180, 603, 626, 1190, 1402
DraIII CACNNNGTG 1 cut(s) 518
DrdI GACNNNNNNGTC 1 cut(s) 776
DseDI GACNNNNNNGTC 1 cut(s) 776
EaeI YGGCCR 3 cut(s) 303, 786, 1095
Eam1104I CTCTTC 2 cut(s) 47, 1166
EarI CTCTTC 2 cut(s) 47, 1166
EciI GGCGGA 3 cut(s) 37, 1136, 1454
Ecl136II GAGCTC 2 cut(s) 442, 885
Eco24I GRGCYC 5 cut(s) 444, 512, 887, 1131, 1281
Eco31I GGTCTC 1 cut(s) 920
Eco47I GGWCC 4 cut(s) 388, 1079, 1103, 1349
Eco53kI GAGCTC 2 cut(s) 442, 885
Eco57I CTGAAG 1 cut(s) 980
Eco72I CACGTG 1 cut(s) 880
Eco88I CYCGRG 2 cut(s) 437, 635
Eco91I GGTNACC 1 cut(s) 812
EcoICRI GAGCTC 2 cut(s) 442, 885
EcoO109I RGGNCCY 3 cut(s) 388, 1127, 1278
EcoO65I GGTNACC 1 cut(s) 812
EcoRI GAATTC 1 cut(s) 489
EcoRII CCWGG 1 cut(s) 1338
EcoT38I GRGCYC 5 cut(s) 444, 512, 887, 1131, 1281
FaeI CATG 4 cut(s) 59, 300, 715, 1327
FaqI GGGAC 2 cut(s) 484, 1065
FatI CATG 4 cut(s) 55, 296, 711, 1323
FauI CCCGC 4 cut(s) 129, 336, 1159, 1456
FbaI TGATCA 1 cut(s) 603
FblI GTMKAC 1 cut(s) 840
FokI GGATG 3 cut(s) 47, 188, 709
FriOI GRGCYC 5 cut(s) 444, 512, 887, 1131, 1281
FspI TGCGCA 1 cut(s) 1037
GlaI GCGC 8 cut(s) 211, 291, 332, 399, 435, 654, 1037, 1212
GsaI CCCAGC 1 cut(s) 826
GsuI CTGGAG 1 cut(s) 1134
HaeII RGCGCY 2 cut(s) 437, 1214
HaeIII GGCC 9 cut(s) 269, 305, 510, 525, 788, 802, 1097, 1129, 1279
HapII CCGG 8 cut(s) 219, 266, 410, 916, 1013, 1101, 1137, 1383
HgaI GACGC 7 cut(s) 79, 163, 197, 728, 740, 1205, 1214
HhaI GCGC 8 cut(s) 212, 292, 333, 400, 436, 655, 1038, 1213
Hin1I GRCGYC 5 cut(s) 90, 189, 720, 777, 1197
Hin1II CATG 4 cut(s) 59, 300, 715, 1327
Hin6I GCGC 8 cut(s) 210, 290, 331, 398, 434, 653, 1036, 1211
HinP1I GCGC 8 cut(s) 210, 290, 331, 398, 434, 653, 1036, 1211
HincII GTYRAC 2 cut(s) 94, 841
HindII GTYRAC 2 cut(s) 94, 841
HinfI GANTC 6 cut(s) 348, 528, 640, 955, 1358, 1386
HpaII CCGG 8 cut(s) 219, 266, 410, 916, 1013, 1101, 1137, 1383
HphI GGTGA 4 cut(s) 317, 824, 1312, 1384
Hpy166II GTNNAC 7 cut(s) 94, 448, 775, 841, 1018, 1252, 1422
Hpy188III TCNNGA 7 cut(s) 151, 178, 445, 635, 925, 1113, 1324
Hpy8I GTNNAC 7 cut(s) 94, 448, 775, 841, 1018, 1252, 1422
Hpy99I CGWCG 9 cut(s) 191, 263, 382, 722, 782, 842, 970, 1159, 1165
HpyAV CCTTC 3 cut(s) 223, 515, 748
HpyCH4III ACNGT 7 cut(s) 241, 247, 838, 1155, 1300, 1367, 1459
HpyCH4IV ACGT 9 cut(s) 143, 261, 377, 771, 777, 879, 920, 1320, 1424
HpyCH4V TGCA 4 cut(s) 1216, 1239, 1257, 1422
HpyF10VI GCNNNNNNNGC 5 cut(s) 406, 661, 907, 1035, 1205
HpyF3I CTNAG 1 cut(s) 886
HpySE526I ACGT 9 cut(s) 143, 261, 377, 771, 777, 879, 920, 1320, 1424
Hsp92I GRCGYC 5 cut(s) 90, 189, 720, 777, 1197
Hsp92II CATG 4 cut(s) 59, 300, 715, 1327
HspAI GCGC 8 cut(s) 210, 290, 331, 398, 434, 653, 1036, 1211
KroI GCCGGC 2 cut(s) 218, 409
KroNI GCCGGC 2 cut(s) 220, 411
Ksp22I TGATCA 1 cut(s) 603
KspI CCGCGG 1 cut(s) 288
Kzo9I GATC 5 cut(s) 180, 603, 626, 1190, 1402
LmnI GCTCC 4 cut(s) 4, 976, 1060, 1142
Lsp1109I GCAGC 5 cut(s) 393, 1061, 1200, 1251, 1300
LweI GCATC 5 cut(s) 555, 820, 860, 897, 1405
MaeII ACGT 9 cut(s) 143, 261, 377, 771, 777, 879, 920, 1320, 1424
MalI GATC 5 cut(s) 182, 605, 628, 1192, 1404
MboI GATC 5 cut(s) 180, 603, 626, 1190, 1402
MboII GAAGA 6 cut(s) 34, 175, 763, 928, 1183, 1231
MflI RGATCY 2 cut(s) 180, 626
MhlI GDGCHC 7 cut(s) 444, 512, 887, 1131, 1147, 1281, 1424
MluCI AATT 3 cut(s) 489, 982, 1473
MlyI GAGTC 2 cut(s) 634, 1395
MmeI TCCRAC 4 cut(s) 229, 360, 954, 1386
MroNI GCCGGC 2 cut(s) 218, 409
MroXI GAANNNNTTC 1 cut(s) 713
MseI TTAA 2 cut(s) 1476, 1540
MslI CAYNNNNRTG 3 cut(s) 563, 695, 710
MspA1I CMGCKG 3 cut(s) 287, 904, 1052
MspI CCGG 8 cut(s) 219, 266, 410, 916, 1013, 1101, 1137, 1383
MspR9I CCNGG 3 cut(s) 1013, 1137, 1340
MvaI CCWGG 1 cut(s) 1340
MvnI CGCG 8 cut(s) 174, 210, 287, 331, 398, 653, 734, 1208
MwoI GCNNNNNNNGC 5 cut(s) 406, 661, 907, 1035, 1205
NaeI GCCGGC 2 cut(s) 220, 411
NciI CCSGG 2 cut(s) 1013, 1137
NdeII GATC 5 cut(s) 180, 603, 626, 1190, 1402
NgoMIV GCCGGC 2 cut(s) 218, 409
NlaIII CATG 4 cut(s) 59, 300, 715, 1327
NmeAIII GCCGAG 2 cut(s) 410, 1212
NmuCI GTSAC 7 cut(s) 241, 420, 812, 1305, 1367, 1390, 1487
NsbI TGCGCA 1 cut(s) 1037
NspI RCATGY 1 cut(s) 715
PaeR7I CTCGAG 1 cut(s) 437
PagI TCATGA 1 cut(s) 1323
PaqCI CACCTGC 1 cut(s) 411
PciI ACATGT 1 cut(s) 711
PcsI WCGNNNNNNNCGW 7 cut(s) 195, 237, 255, 512, 777, 786, 1317
PdiI GCCGGC 2 cut(s) 220, 411
PdmI GAANNNNTTC 1 cut(s) 713
PfeI GAWTC 4 cut(s) 348, 528, 955, 1358
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 1 cut(s) 1112
PleI GAGTC 2 cut(s) 634, 1394
PmaCI CACGTG 1 cut(s) 880
PmlI CACGTG 1 cut(s) 880
PpsI GAGTC 2 cut(s) 634, 1394
Ppu21I YACGTR 2 cut(s) 880, 1425
PpuMI RGGWCCY 1 cut(s) 388
PscI ACATGT 1 cut(s) 711
PshAI GACNNNNGTC 1 cut(s) 1108
Psp124BI GAGCTC 2 cut(s) 444, 887
Psp5II RGGWCCY 1 cut(s) 388
Psp6I CCWGG 1 cut(s) 1338
PspCI CACGTG 1 cut(s) 880
PspEI GGTNACC 1 cut(s) 812
PspFI CCCAGC 1 cut(s) 822
PspGI CCWGG 1 cut(s) 1338
PspOMI GGGCCC 3 cut(s) 508, 1127, 1277
PspPPI RGGWCCY 1 cut(s) 388
PspXI VCTCGAGB 1 cut(s) 437
PsrI GAACNNNNNNTAC 2 cut(s) 1319, 1351
PstI CTGCAG 1 cut(s) 1218
PsuI RGATCY 2 cut(s) 180, 626
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 2 cut(s) 614, 1427
RsaNI GTAC 2 cut(s) 613, 1426
RseI CAYNNNNRTG 3 cut(s) 563, 695, 710
SacI GAGCTC 2 cut(s) 444, 887
SacII CCGCGG 1 cut(s) 288
SalI GTCGAC 1 cut(s) 839
SaqAI TTAA 2 cut(s) 1476, 1540
Sau3AI GATC 5 cut(s) 180, 603, 626, 1190, 1402
SchI GAGTC 2 cut(s) 634, 1395
ScrFI CCNGG 3 cut(s) 1013, 1137, 1340
SduI GDGCHC 7 cut(s) 444, 512, 887, 1131, 1147, 1281, 1424
SfaNI GCATC 5 cut(s) 555, 820, 860, 897, 1405
SfcI CTRYAG 1 cut(s) 1214
Sfr274I CTCGAG 1 cut(s) 437
Sfr303I CCGCGG 1 cut(s) 288
SgrBI CCGCGG 1 cut(s) 288
SinI GGWCC 4 cut(s) 388, 1079, 1103, 1349
SlaI CTCGAG 1 cut(s) 437
SmiMI CAYNNNNRTG 3 cut(s) 563, 695, 710
SmlI CTYRAG 3 cut(s) 14, 149, 437
SmoI CTYRAG 3 cut(s) 14, 149, 437
Sse9I AATT 3 cut(s) 489, 982, 1473
SstI GAGCTC 2 cut(s) 444, 887
StyD4I CCNGG 3 cut(s) 1011, 1135, 1338
TaaI ACNGT 7 cut(s) 241, 247, 838, 1155, 1300, 1367, 1459
TaiI ACGT 9 cut(s) 146, 264, 380, 774, 780, 882, 923, 1323, 1427
TaqII GACCGA 1 cut(s) 561
TasI AATT 3 cut(s) 489, 982, 1473
TauI GCSGC 9 cut(s) 127, 290, 675, 851, 904, 1055, 1076, 1100, 1211
TfiI GAWTC 4 cut(s) 348, 528, 955, 1358
Tru1I TTAA 2 cut(s) 1476, 1540
Tru9I TTAA 2 cut(s) 1476, 1540
TscAI CASTG 3 cut(s) 250, 1249, 1405
TseFI GTSAC 7 cut(s) 241, 420, 812, 1305, 1367, 1390, 1487
TseI GCWGC 5 cut(s) 406, 1049, 1213, 1239, 1313
Tsp45I GTSAC 7 cut(s) 241, 420, 812, 1305, 1367, 1390, 1487
TspDTI ATGAA 5 cut(s) 431, 713, 764, 1340, 1496
TspGWI ACGGA 3 cut(s) 619, 796, 876
TspRI CASTG 3 cut(s) 250, 1249, 1405
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 1 cut(s) 1112
VneI GTGCAC 1 cut(s) 1420
VpaK11BI GGWCC 4 cut(s) 388, 1079, 1103, 1349
XapI RAATTY 1 cut(s) 489
XceI RCATGY 1 cut(s) 715
XcmI CCANNNNNNNNNTGG 2 cut(s) 1066, 1090
XhoI CTCGAG 1 cut(s) 437
XmiI GTMKAC 1 cut(s) 840
XmnI GAANNNNTTC 1 cut(s) 713
ZraI GACGTC 1 cut(s) 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.