Rh5BG439700

Glucan endo-1,3-beta-glucosidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0016534
Physical Location & Seq
Reverse (-)
70784055 .. 70787068
3014 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG439700.1

Sequence Viewer

Length: 1500 bp
ATGGAGCCCAAGAAGCTCCTCCTCCTCTTCCTCTTCTTCCTTTTCCACTCCGCCTGCCACGTCACACTCACCGCCGCCATCGGCGTCAACTACGGCACAGTAGCCGACAACCTCCCGCCCCCGTCCCAGGTCGCCACCTTCCTCAAGACCAAGACCACCATCGACCGCGTCAAGATCTTCGACACCAACCCCGACGTCCTCCGCGCATTCGCCAACACCGGCATCGCCGTCACCGTCACCGTCGGTAACGGCGACTTCCCGCCCCTGGCCAAGCTCCCCGCCGCCCAGTCCTGGGTGGCCGACAACATCCTCCCCTTCTATCCCCGCACCAACATCAACCGAATCGCCGTCGGGAACGAAATCCTCGCCACGTCGGACAAGGACCTCATCGCGCATCTCCTGCCGGCTATGAAGGCGCTCAACTCGGCTCTCAACCTCGCCAACGTCACCGCCATTCAGGTCTCGACACCTCACTCGCTCGGCATACTCGCCCCCAACACGGGCCCACCGAGCCAAGGACAGTTCCGGACCGGCTACGACAAGATCATATTCGAGCCGATCTTGGAGTACCATCGCCAGACCAAATCGCCGTTCCTCGTCAACCCGTACCCCTTTTTCGGTCTCTCACCCGATACGCTCAACTACGCTACTTTCAGGCCAAACGGCGGCGTTTTCGACAATGCCACCGGCATGAACTACACCAACATGTTCGACGCCCAGATGGACGCGGTTTTCTCGGCGATGAAGAAGGTCGGGTATGAAGACGTGGATCTAGTAGTCGCCGAAACCGGGTGGCCCTCCGCGGGCGACCCGAACCAACTCGGTGTCAGCTTGGAAAACGCGGTGTCGTACAACGGGAACCTCATCCGCCACGTTAGCTCCGGGAAGGGCACGCCGTTGATGCCGAACAGGACGTTCGAGACTTACATTTTCGCGCTGTTCAATGAGAACCTCAAGCCCACGCTGTCGGAGCAGAATTACGGGCTGTTCAAACCCGACCTCGACCCGGTTTACGATGTCGGCCTTTTACGCAACGGGCAGGCACAGGGTCCCACATCCGGCCCGGCATCAGGCCCATCAGCGAGTACTGCAGCAGGCCCAGCAGCAATGGGTCCCACGCCCGATGTAGTTGCGCAACCACCGTCGTCGACGGGGAAGAGGTGGTGCGTGCCGAAACCGAACGCTACCCAGGCGACGCTGCAGAAGAACATAGACTACGTTTGCAGCATCGGAGTGGACTGCAAGCCCATACAGAACGGTGGGCCGTGCTTTGAGCCGAACACTGTGAAGTCACACGCGGCTTACGTCATGAACGCCTATTACCAGGATCATGGCCCACAGGATATTAACTGCGATTTCAACGGCACTGGAGTGGTCACCACCGCTGATCCCAGTAAGTTATATATTTCAGCAAAAATTAATAATAGTGGAAATTGCAAAATTAAAAAGGCTAATAATTGGGTGGCGCGTGGCAGGTTACAAAACGTGCACGTACCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_17 X8

Protein Analysis

499

Amino Acids

53.71

Weight (kDa)

7.6

Isoelectric Point (pI)

28.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 27 - 340 1.6e-78 Glycosyl hydrolases family 17
X8 PF07983 388 - 457 4.8e-23 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46570
fragaria_vesca FvH4_3g36150
malus_domestica MD11G1107600.v1.1
prunus_persica Prupe.6G076900_v2.0.a1
pyrus_communis pycom11g08910
rosa_chinensis RchiOBHm_Chr5g0064591 RchiOBHm_Chr5g0064901
rosa_laevigata RLG00000035739
rosa_roxburghii Rroxscaffold_1G00016410
rosa_rugosa Rorug05G0366600
rosa_samantha Rh5AG424700 Rh5BG439700 Rh5DG453000
rosa_wichuraiana Rw5G039930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 198
Acc16I TGCGCA 1 cut(s) 1134
Acc36I ACCTGC 1 cut(s) 1464
AccI GTMKAC 1 cut(s) 1148
AccII CGCG 9 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298, 1468
AccIII TCCGGA 1 cut(s) 525
AclWI GGATC 3 cut(s) 777, 1335, 1382
AcoI YGGCCR 2 cut(s) 267, 297
AcyI GRCGYC 3 cut(s) 84, 195, 714
AfaI GTAC 5 cut(s) 569, 608, 851, 1087, 1494
AflIII ACRYGT 1 cut(s) 705
AgsI TTSAA 3 cut(s) 943, 991, 1360
AjiI CACGTC 3 cut(s) 61, 372, 766
AjnI CCWGG 5 cut(s) 126, 264, 290, 1188, 1323
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
AleI CACNNNNGTG 1 cut(s) 1370
AluBI AGCT 4 cut(s) 16, 274, 831, 879
AluI AGCT 4 cut(s) 16, 274, 831, 879
Alw21I GWGCWC 1 cut(s) 1491
Alw26I GTCTC 3 cut(s) 466, 626, 914
Alw44I GTGCAC 1 cut(s) 1487
AlwI GGATC 3 cut(s) 777, 1335, 1382
Aor13HI TCCGGA 1 cut(s) 525
ApaI GGGCCC 1 cut(s) 506
ApaLI GTGCAC 1 cut(s) 1487
ApeKI GCWGC 4 cut(s) 1091, 1103, 1198, 1224
AseI ATTAAT 1 cut(s) 1419
AspLEI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1468
AsuC2I CCSGG 4 cut(s) 790, 883, 1007, 1064
AsuHPI GGTGA 6 cut(s) 61, 223, 229, 439, 618, 1369
AvaII GGWCC 4 cut(s) 382, 528, 1049, 1112
BaeGI GKGCMC 3 cut(s) 506, 893, 1491
BalI TGGCCA 1 cut(s) 269
BanII GRGCYC 2 cut(s) 9, 506
BbsI GAAGAC 1 cut(s) 768
Bbv12I GWGCWC 1 cut(s) 1491
BbvI GCAGC 4 cut(s) 1103, 1115, 1185, 1236
BccI CCATC 5 cut(s) 86, 167, 579, 715, 1084
BceAI ACGGC 9 cut(s) 109, 212, 265, 332, 574, 679, 880, 1249, 1378
BcgI CGANNNNNNTGC 2 cut(s) 1112, 1146
BciT130I CCWGG 5 cut(s) 128, 266, 292, 1190, 1325
BcnI CCSGG 4 cut(s) 790, 883, 1007, 1064
BcoDI GTCTC 3 cut(s) 466, 626, 914
BfaI CTAG 1 cut(s) 773
BfmI CTRYAG 2 cut(s) 1089, 1199
BfoI RGCGCY 1 cut(s) 419
BfuAI ACCTGC 1 cut(s) 1464
BglII AGATCT 1 cut(s) 174
BisI GCNGC 8 cut(s) 75, 282, 667, 1092, 1104, 1199, 1225, 1299
BlsI GCNGC 8 cut(s) 76, 283, 668, 1093, 1105, 1200, 1226, 1300
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 9 cut(s) 128, 266, 292, 790, 883, 1007, 1064, 1190, 1325
Bme18I GGWCC 4 cut(s) 382, 528, 1049, 1112
BmgBI CACGTC 3 cut(s) 61, 372, 766
BmiI GGNNCC 7 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114
BmrFI CCNGG 9 cut(s) 128, 266, 292, 790, 883, 1007, 1064, 1190, 1325
BmrI ACTGGG 2 cut(s) 280, 1386
BmsI GCATC 5 cut(s) 231, 403, 891, 1076, 1236
BmuI ACTGGG 2 cut(s) 280, 1386
BpiI GAAGAC 1 cut(s) 768
BpmI CTGGAG 1 cut(s) 1389
BpuEI CTTGAG 2 cut(s) 128, 938
BpuMI CCSGG 4 cut(s) 790, 883, 1007, 1064
BsaAI YACGTR 1 cut(s) 1492
BsaHI GRCGYC 3 cut(s) 84, 195, 714
BsaI GGTCTC 2 cut(s) 466, 626
BsaJI CCNNGG 6 cut(s) 126, 264, 291, 514, 801, 1188
BsaWI WCCGGW 1 cut(s) 525
BsaXI ACNNNNNCTCC 2 cut(s) 863, 893
Bse118I RCCGGY 4 cut(s) 218, 403, 530, 686
Bse1I ACTGG 3 cut(s) 286, 1372, 1392
Bse3DI GCAATG 1 cut(s) 1113
BseAI TCCGGA 1 cut(s) 525
BseBI CCWGG 5 cut(s) 128, 266, 292, 1190, 1325
BseDI CCNNGG 6 cut(s) 126, 264, 291, 514, 801, 1188
BseGI GGATG 3 cut(s) 306, 864, 1055
BseMI GCAATG 1 cut(s) 1113
BseNI ACTGG 3 cut(s) 286, 1372, 1392
BseRI GAGGAG 3 cut(s) 8, 11, 14
BseSI GKGCMC 3 cut(s) 506, 893, 1491
BseXI GCAGC 4 cut(s) 1103, 1115, 1185, 1236
BseYI CCCAGC 1 cut(s) 1099
Bsh1236I CGCG 9 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298, 1468
Bsh1285I CGRYCG 1 cut(s) 166
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 1491
BslFI GGGAC 3 cut(s) 109, 1035, 1098
BsmAI GTCTC 3 cut(s) 466, 626, 914
BsmFI GGGAC 3 cut(s) 109, 1035, 1098
BsmI GAATGC 1 cut(s) 206
Bso31I GGTCTC 2 cut(s) 466, 626
Bsp120I GGGCCC 1 cut(s) 502
Bsp1286I GDGCHC 4 cut(s) 9, 506, 893, 1491
Bsp13I TCCGGA 1 cut(s) 525
Bsp143I GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
BspEI TCCGGA 1 cut(s) 525
BspFNI CGCG 9 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298, 1468
BspHI TCATGA 1 cut(s) 1308
BspLI GGNNCC 7 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114
BspMAI CTGCAG 2 cut(s) 1093, 1203
BspMI ACCTGC 1 cut(s) 1464
BspPI GGATC 3 cut(s) 777, 1335, 1382
BspTNI GGTCTC 2 cut(s) 466, 626
BsrDI GCAATG 1 cut(s) 1113
BsrFI RCCGGY 4 cut(s) 218, 403, 530, 686
BsrI ACTGG 3 cut(s) 286, 1372, 1392
BssAI RCCGGY 4 cut(s) 218, 403, 530, 686
BssECI CCNNGG 6 cut(s) 126, 264, 291, 514, 801, 1188
BssMI GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
BssNI GRCGYC 3 cut(s) 84, 195, 714
BssT1I CCWWGG 1 cut(s) 514
Bst2UI CCWGG 5 cut(s) 128, 266, 292, 1190, 1325
Bst4CI ACNGT 7 cut(s) 100, 235, 241, 522, 1143, 1259, 1285
Bst6I CTCTTC 3 cut(s) 32, 38, 1151
BstACI GRCGYC 3 cut(s) 84, 195, 714
BstAPI GCANNNNNTGC 1 cut(s) 400
BstBAI YACGTR 1 cut(s) 1492
BstC8I GCNNGC 8 cut(s) 55, 405, 805, 893, 1041, 1096, 1169, 1244
BstDSI CCRYGG 1 cut(s) 801
BstEII GGTNACC 1 cut(s) 1375
BstF5I GGATG 3 cut(s) 306, 864, 1055
BstFNI CGCG 9 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298, 1468
BstH2I RGCGCY 1 cut(s) 419
BstHHI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1468
BstKTI GATC 6 cut(s) 177, 546, 561, 772, 1330, 1390
BstMAI GTCTC 3 cut(s) 466, 626, 914
BstMBI GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
BstMCI CGRYCG 1 cut(s) 166
BstNI CCWGG 5 cut(s) 128, 266, 292, 1190, 1325
BstNSI RCATGY 1 cut(s) 709
BstPI GGTNACC 1 cut(s) 1375
BstSCI CCNGG 9 cut(s) 126, 264, 290, 788, 881, 1005, 1062, 1188, 1323
BstSFI CTRYAG 2 cut(s) 1089, 1199
BstSLI GKGCMC 3 cut(s) 506, 893, 1491
BstUI CGCG 9 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298, 1468
BstV1I GCAGC 4 cut(s) 1103, 1115, 1185, 1236
BstV2I GAAGAC 1 cut(s) 768
BstX2I RGATCY 2 cut(s) 174, 769
BstXI CCANNNNNNTGG 1 cut(s) 1331
BstYI RGATCY 2 cut(s) 174, 769
BtgI CCRYGG 1 cut(s) 801
BtgZI GCGATG 4 cut(s) 208, 373, 557, 755
BtrI CACGTC 3 cut(s) 61, 372, 766
BtsCI GGATG 3 cut(s) 306, 864, 1055
BtsIMutI CAGTG 2 cut(s) 1281, 1365
BveI ACCTGC 1 cut(s) 1464
Cac8I GCNNGC 8 cut(s) 55, 405, 805, 893, 1041, 1096, 1169, 1244
CciI TCATGA 1 cut(s) 1308
CfoI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1468
Cfr10I RCCGGY 4 cut(s) 218, 403, 530, 686
Cfr42I CCGCGG 1 cut(s) 804
CpoI CGGWCCG 1 cut(s) 528
CseI GACGC 5 cut(s) 73, 157, 722, 734, 1204
Csp6I GTAC 5 cut(s) 568, 607, 850, 1086, 1493
CspI CGGWCCG 1 cut(s) 528
CviAII CATG 4 cut(s) 691, 706, 1309, 1331
CviQI GTAC 5 cut(s) 568, 607, 850, 1086, 1493
DpnI GATC 6 cut(s) 176, 545, 560, 771, 1329, 1389
DpnII GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
EaeI YGGCCR 2 cut(s) 267, 297
Eam1104I CTCTTC 3 cut(s) 32, 38, 1151
EarI CTCTTC 3 cut(s) 32, 38, 1151
EciI GGCGGA 2 cut(s) 40, 857
Eco130I CCWWGG 1 cut(s) 514
Eco24I GRGCYC 2 cut(s) 9, 506
Eco31I GGTCTC 2 cut(s) 466, 626
Eco47I GGWCC 4 cut(s) 382, 528, 1049, 1112
Eco91I GGTNACC 1 cut(s) 1375
EcoO109I RGGNCCY 3 cut(s) 382, 1049, 1112
EcoO65I GGTNACC 1 cut(s) 1375
EcoRII CCWGG 5 cut(s) 126, 264, 290, 1188, 1323
EcoT14I CCWWGG 1 cut(s) 514
EcoT38I GRGCYC 2 cut(s) 9, 506
ErhI CCWWGG 1 cut(s) 514
FaeI CATG 4 cut(s) 694, 709, 1312, 1334
FaqI GGGAC 3 cut(s) 109, 1035, 1098
FatI CATG 4 cut(s) 690, 705, 1308, 1330
FauI CCCGC 5 cut(s) 123, 267, 286, 332, 796
FblI GTMKAC 1 cut(s) 1148
Fnu4HI GCNGC 8 cut(s) 75, 282, 667, 1092, 1104, 1199, 1225, 1299
FokI GGATG 3 cut(s) 293, 851, 1042
FriOI GRGCYC 2 cut(s) 9, 506
Fsp4HI GCNGC 8 cut(s) 75, 282, 667, 1092, 1104, 1199, 1225, 1299
FspBI CTAG 1 cut(s) 773
FspI TGCGCA 1 cut(s) 1134
GlaI GCGC 6 cut(s) 205, 393, 417, 936, 1134, 1467
GluI GCNGC 8 cut(s) 75, 282, 667, 1092, 1104, 1199, 1225, 1299
GsaI CCCAGC 1 cut(s) 1103
GsuI CTGGAG 1 cut(s) 1389
HaeII RGCGCY 1 cut(s) 419
HgaI GACGC 5 cut(s) 73, 157, 722, 734, 1204
HhaI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1468
Hin1I GRCGYC 3 cut(s) 84, 195, 714
Hin1II CATG 4 cut(s) 694, 709, 1312, 1334
Hin6I GCGC 6 cut(s) 204, 392, 416, 935, 1133, 1466
HinP1I GCGC 6 cut(s) 204, 392, 416, 935, 1133, 1466
HincII GTYRAC 3 cut(s) 88, 601, 1149
HindII GTYRAC 3 cut(s) 88, 601, 1149
HinfI GANTC 1 cut(s) 342
HphI GGTGA 6 cut(s) 61, 223, 229, 439, 618, 1369
Hpy166II GTNNAC 6 cut(s) 88, 601, 1012, 1149, 1237, 1489
Hpy188I TCNGA 3 cut(s) 376, 970, 1232
Hpy188III TCNNGA 7 cut(s) 145, 172, 352, 463, 526, 919, 1309
Hpy8I GTNNAC 6 cut(s) 88, 601, 1012, 1149, 1237, 1489
Hpy99I CGWCG 9 cut(s) 197, 245, 353, 376, 716, 1147, 1150, 1153, 1198
HpyAV CCTTC 5 cut(s) 148, 325, 406, 742, 880
HpyCH4III ACNGT 7 cut(s) 100, 235, 241, 522, 1143, 1259, 1285
HpyCH4V TGCA 6 cut(s) 1091, 1201, 1224, 1242, 1437, 1489
Hsp92I GRCGYC 3 cut(s) 84, 195, 714
Hsp92II CATG 4 cut(s) 694, 709, 1312, 1334
HspAI GCGC 6 cut(s) 204, 392, 416, 935, 1133, 1466
KflI GGGWCCC 2 cut(s) 1049, 1112
Kpn2I TCCGGA 1 cut(s) 525
KroI GCCGGC 1 cut(s) 403
KroNI GCCGGC 1 cut(s) 405
KspI CCGCGG 1 cut(s) 804
Kzo9I GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
LmnI GCTCC 5 cut(s) 4, 21, 279, 884, 970
Lsp1109I GCAGC 4 cut(s) 1103, 1115, 1185, 1236
LweI GCATC 5 cut(s) 231, 403, 891, 1076, 1236
MaeI CTAG 1 cut(s) 773
MaeIII GTNAC 8 cut(s) 61, 229, 235, 245, 445, 1290, 1375, 1476
MalI GATC 6 cut(s) 176, 545, 560, 771, 1329, 1389
MboI GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
MboII GAAGA 8 cut(s) 19, 25, 28, 169, 757, 773, 1168, 1216
MflI RGATCY 2 cut(s) 174, 769
MhlI GDGCHC 4 cut(s) 9, 506, 893, 1491
MlsI TGGCCA 1 cut(s) 269
MluCI AATT 5 cut(s) 976, 1416, 1432, 1440, 1456
MluNI TGGCCA 1 cut(s) 269
MmeI TCCRAC 2 cut(s) 354, 948
Mox20I TGGCCA 1 cut(s) 269
MroI TCCGGA 1 cut(s) 525
MroNI GCCGGC 1 cut(s) 403
MscI TGGCCA 1 cut(s) 269
MseI TTAA 3 cut(s) 1347, 1419, 1443
MslI CAYNNNNRTG 4 cut(s) 689, 704, 1232, 1370
Msp20I TGGCCA 1 cut(s) 269
MspA1I CMGCKG 2 cut(s) 803, 1385
MspR9I CCNGG 9 cut(s) 128, 266, 292, 790, 883, 1007, 1064, 1190, 1325
Mva1269I GAATGC 1 cut(s) 206
MvaI CCWGG 5 cut(s) 128, 266, 292, 1190, 1325
MvnI CGCG 9 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298, 1468
NaeI GCCGGC 1 cut(s) 405
NciI CCSGG 4 cut(s) 790, 883, 1007, 1064
NdeII GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
NgoMIV GCCGGC 1 cut(s) 403
NlaIII CATG 4 cut(s) 694, 709, 1312, 1334
NlaIV GGNNCC 7 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114
NmeAIII GCCGAG 3 cut(s) 404, 459, 716
NmuCI GTSAC 6 cut(s) 61, 229, 235, 445, 1290, 1375
NsbI TGCGCA 1 cut(s) 1134
NspI RCATGY 1 cut(s) 709
OliI CACNNNNGTG 1 cut(s) 1370
PagI TCATGA 1 cut(s) 1308
PciI ACATGT 1 cut(s) 705
PcsI WCGNNNNNNNCGW 4 cut(s) 231, 249, 506, 1302
PctI GAATGC 1 cut(s) 206
PdiI GCCGGC 1 cut(s) 405
PfeI GAWTC 1 cut(s) 342
PflFI GACNNNGTC 1 cut(s) 167
PfoI TCCNGGA 1 cut(s) 881
PkrI GCNGC 8 cut(s) 76, 283, 668, 1093, 1105, 1200, 1226, 1300
Ppu21I YACGTR 1 cut(s) 1492
PpuMI RGGWCCY 3 cut(s) 382, 1049, 1112
PscI ACATGT 1 cut(s) 705
PshBI ATTAAT 1 cut(s) 1419
Psp5II RGGWCCY 3 cut(s) 382, 1049, 1112
Psp6I CCWGG 5 cut(s) 126, 264, 290, 1188, 1323
PspEI GGTNACC 1 cut(s) 1375
PspFI CCCAGC 1 cut(s) 1099
PspGI CCWGG 5 cut(s) 126, 264, 290, 1188, 1323
PspN4I GGNNCC 7 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114
PspOMI GGGCCC 1 cut(s) 502
PspPPI RGGWCCY 3 cut(s) 382, 1049, 1112
PsrI GAACNNNNNNTAC 4 cut(s) 1199, 1231, 1304, 1336
PstI CTGCAG 2 cut(s) 1093, 1203
PsuI RGATCY 2 cut(s) 174, 769
PsyI GACNNNGTC 1 cut(s) 167
RsaI GTAC 5 cut(s) 569, 608, 851, 1087, 1494
RsaNI GTAC 5 cut(s) 568, 607, 850, 1086, 1493
RseI CAYNNNNRTG 4 cut(s) 689, 704, 1232, 1370
Rsr2I CGGWCCG 1 cut(s) 528
RsrII CGGWCCG 1 cut(s) 528
SacII CCGCGG 1 cut(s) 804
SalI GTCGAC 1 cut(s) 1147
SaqAI TTAA 3 cut(s) 1347, 1419, 1443
SatI GCNGC 8 cut(s) 75, 282, 667, 1092, 1104, 1199, 1225, 1299
Sau3AI GATC 6 cut(s) 174, 543, 558, 769, 1327, 1387
ScaI AGTACT 1 cut(s) 1087
ScrFI CCNGG 9 cut(s) 128, 266, 292, 790, 883, 1007, 1064, 1190, 1325
SduI GDGCHC 4 cut(s) 9, 506, 893, 1491
SfaNI GCATC 5 cut(s) 231, 403, 891, 1076, 1236
SfcI CTRYAG 2 cut(s) 1089, 1199
Sfr303I CCGCGG 1 cut(s) 804
SgrBI CCGCGG 1 cut(s) 804
SgrDI CGTCGACG 1 cut(s) 1147
SinI GGWCC 4 cut(s) 382, 528, 1049, 1112
SmiMI CAYNNNNRTG 4 cut(s) 689, 704, 1232, 1370
SmlI CTYRAG 2 cut(s) 143, 953
SmoI CTYRAG 2 cut(s) 143, 953
Sse9I AATT 5 cut(s) 976, 1416, 1432, 1440, 1456
SspMI CTAG 1 cut(s) 773
StyD4I CCNGG 9 cut(s) 126, 264, 290, 788, 881, 1005, 1062, 1188, 1323
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 7 cut(s) 100, 235, 241, 522, 1143, 1259, 1285
TaqI TCGA 9 cut(s) 162, 180, 464, 552, 675, 711, 918, 1002, 1148
TaqII GACCGA 1 cut(s) 608
TasI AATT 5 cut(s) 976, 1416, 1432, 1440, 1456
TatI WGTACW 1 cut(s) 1085
TauI GCSGC 4 cut(s) 77, 284, 669, 1301
TfiI GAWTC 1 cut(s) 342
Tru1I TTAA 3 cut(s) 1347, 1419, 1443
Tru9I TTAA 3 cut(s) 1347, 1419, 1443
TscAI CASTG 2 cut(s) 1288, 1372
TseFI GTSAC 6 cut(s) 61, 229, 235, 445, 1290, 1375
TseI GCWGC 4 cut(s) 1091, 1103, 1198, 1224
Tsp45I GTSAC 6 cut(s) 61, 229, 235, 445, 1290, 1375
TspDTI ATGAA 5 cut(s) 425, 707, 758, 774, 1325
TspRI CASTG 2 cut(s) 1288, 1372
Tth111I GACNNNGTC 1 cut(s) 167
VneI GTGCAC 1 cut(s) 1487
VpaK11BI GGWCC 4 cut(s) 382, 528, 1049, 1112
VspI ATTAAT 1 cut(s) 1419
XceI RCATGY 1 cut(s) 709
XmiI GTMKAC 1 cut(s) 1148
XspI CTAG 1 cut(s) 773
ZraI GACGTC 1 cut(s) 196
ZrmI AGTACT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.