Rh5DG453000

Glucan endo-1,3-beta-glucosidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0016534
Physical Location & Seq
Reverse (-)
72265364 .. 72267525
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG453000.1

Sequence Viewer

Length: 1530 bp
ATGGAGCCCAAGAAGCTCCTCCTCCTCTTCCTCTGCTTCCTTTTCCACTCCGCCTGCCACGTCATCCTCACCACCGCCATCGGCGTCAACTACGGCACAGTAGCCGACAACCTCCCGCCCCCGTCCCAGGTCGCCACCTTCCTCAAGACCAAGACCACCATCGACCGCGTCAAGATCTTCGACACCAACCCCGACGTCCTCCGCGCATTCGCCAACACCGGCATCGCCGTCACCGTCACCGTCGGTAACGGCGACTTCCCGCCCCTCTCCAAGCTCCCCGCCGCCCAGTCCTGGGTGGCCGACAACATCCTCCCCTTCTATCCCCGCACCAACATCAACCGAATCGCCGTCGGGAACGAAATCCTCGCCACGTCGGACAAGGACCTCATCGCGCATCTCCTGCCGGCTATGAAGGCGCTCCACTCGGCTCTCAACCTCGCCAACATCACCGCCATTCAGGTCTCGACACCTCACTCGCTCGGCATACTCGCCCCCAACACGGGCCCACCGAGCCAAGGACAGTTCCGGACCGGCTACGACAAGATCATATTCGAGCCGATCTTGGAGTACCATCGCCAGACCAAATCGCCGTTCCTCGTCAACCCGTACCCGTTTTTCGGTCTCTCACCCGATACGCTCAACTACGCTACTTTCAGGCCAAACGGCGGCGTTTTCGACAATGCCACCGGCATGAACTACACCAACATGTTCGACGCCCAGATGGACGCGGTTTTCTCGGCGATGAAGAAGGTCGGGTATGAAGACGTGGATCTAGTAGTCGCCGAAACCGGGTGGCCCTCCGCGGGCGACCCGAACCAACTCGGTGTCAGCTTGGAAAACGCGGTGTCGTACAACGGGAACCTCATCCGCCACGTTAGCTCCGGGAAGGGCACGCCGTTGATGCCGAACAGGACTTTCGAGACTTACATTTTCGCGCTGTTCAATGAGAACCTGAAGCCCACGCTGTCGGAGCAGAATTACGGGCTGTTCAAACCCGACCTCGACCCGGTTTACGACGTGGGCCTTTTACGCAACGGGCAGGCACAGGGCCCCACATCCGGCCCGGCATCAGGCCCATCAGCGAGTACTGCAGCAGGCCCAGCAGCAATGGGTCCCACGCCCGATGTAGTTGCGCAACCACCGTCGTCGACGGGGCAGAGGTGGTGCGTGCCGAAACCGAACGCTACCAAGGCGGCGCTGCAGAAGAACATAGACTACGTTTGCAGCAACGGAGTGGACTGCAAGCCCATACAGAATGGTGGGCCGTGCTTTGAGCCCAACACTGTGAAGTCGCACGCGGCTTACGTCATGAACGCTTATTACCAGGACCATGGCCCACAGGATATCAACTGCGATTTCAACGGCACCGGAGTCGTCACCACCACCGATCCCAGTTACAAAACGTGCACGTACCCTAACAAGGCGGAGAAGGAGGCAAAGTCGGTGGCGGGAAGCTCAATGAGAATGAGATGTAGCAAATTGGCTCTGTTCTTTCTAATGGTTGGTTGTGCTGTAATGTTTAATATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_17 X8

Protein Analysis

509

Amino Acids

54.85

Weight (kDa)

6.75

Isoelectric Point (pI)

31.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 27 - 340 7e-79 Glycosyl hydrolases family 17
X8 PF07983 388 - 457 1.2e-23 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46570
fragaria_vesca FvH4_3g36150
malus_domestica MD11G1107600.v1.1
prunus_persica Prupe.6G076900_v2.0.a1
pyrus_communis pycom11g08910
rosa_chinensis RchiOBHm_Chr5g0064591 RchiOBHm_Chr5g0064901
rosa_laevigata RLG00000035739
rosa_roxburghii Rroxscaffold_1G00016410
rosa_rugosa Rorug05G0366600
rosa_samantha Rh5AG424700 Rh5BG439700 Rh5DG453000
rosa_wichuraiana Rw5G039930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 198
Acc16I TGCGCA 1 cut(s) 1134
AccB1I GGYRCC 1 cut(s) 1364
AccI GTMKAC 1 cut(s) 1148
AccII CGCG 8 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298
AccIII TCCGGA 1 cut(s) 525
AclWI GGATC 2 cut(s) 777, 1382
AcoI YGGCCR 1 cut(s) 297
AcuI CTGAAG 1 cut(s) 974
AcyI GRCGYC 3 cut(s) 84, 195, 714
AfaI GTAC 5 cut(s) 569, 608, 851, 1087, 1412
AflIII ACRYGT 1 cut(s) 705
AgsI TTSAA 3 cut(s) 943, 991, 1360
AjiI CACGTC 4 cut(s) 61, 372, 766, 1018
AjnI CCWGG 3 cut(s) 126, 290, 1323
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
AluBI AGCT 5 cut(s) 16, 274, 831, 879, 1455
AluI AGCT 5 cut(s) 16, 274, 831, 879, 1455
Alw21I GWGCWC 1 cut(s) 1409
Alw26I GTCTC 3 cut(s) 466, 626, 914
Alw44I GTGCAC 1 cut(s) 1405
AlwI GGATC 2 cut(s) 777, 1382
Aor13HI TCCGGA 1 cut(s) 525
ApaI GGGCCC 2 cut(s) 506, 1052
ApaLI GTGCAC 1 cut(s) 1405
ApeKI GCWGC 4 cut(s) 1091, 1103, 1198, 1224
AspLEI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1198
AsuC2I CCSGG 4 cut(s) 790, 883, 1007, 1064
AsuHPI GGTGA 6 cut(s) 61, 223, 229, 439, 618, 1369
AvaII GGWCC 4 cut(s) 382, 528, 1112, 1327
BaeGI GKGCMC 4 cut(s) 506, 893, 1052, 1409
BanI GGYRCC 1 cut(s) 1364
BanII GRGCYC 4 cut(s) 9, 506, 1052, 1278
BbsI GAAGAC 1 cut(s) 768
Bbv12I GWGCWC 1 cut(s) 1409
BbvI GCAGC 4 cut(s) 1103, 1115, 1185, 1236
BccI CCATC 5 cut(s) 86, 167, 579, 715, 1084
BceAI ACGGC 9 cut(s) 109, 212, 265, 332, 574, 679, 880, 1249, 1378
BcgI CGANNNNNNTGC 4 cut(s) 1112, 1146, 1354, 1388
BciT130I CCWGG 3 cut(s) 128, 292, 1325
BcnI CCSGG 4 cut(s) 790, 883, 1007, 1064
BcoDI GTCTC 3 cut(s) 466, 626, 914
BfaI CTAG 1 cut(s) 773
BfmI CTRYAG 2 cut(s) 1089, 1199
BfoI RGCGCY 2 cut(s) 419, 1199
BglII AGATCT 1 cut(s) 174
BisI GCNGC 8 cut(s) 282, 667, 1092, 1104, 1194, 1199, 1225, 1299
BlsI GCNGC 8 cut(s) 283, 668, 1093, 1105, 1195, 1200, 1226, 1300
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 7 cut(s) 128, 292, 790, 883, 1007, 1064, 1325
Bme18I GGWCC 4 cut(s) 382, 528, 1112, 1327
BmgBI CACGTC 4 cut(s) 61, 372, 766, 1018
BmiI GGNNCC 8 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114, 1366
BmrFI CCNGG 7 cut(s) 128, 292, 790, 883, 1007, 1064, 1325
BmrI ACTGGG 2 cut(s) 280, 1386
BmsI GCATC 4 cut(s) 231, 403, 891, 1076
BmuI ACTGGG 2 cut(s) 280, 1386
BpiI GAAGAC 1 cut(s) 768
BpuEI CTTGAG 1 cut(s) 128
BpuMI CCSGG 4 cut(s) 790, 883, 1007, 1064
BsaAI YACGTR 1 cut(s) 1410
BsaHI GRCGYC 3 cut(s) 84, 195, 714
BsaI GGTCTC 2 cut(s) 466, 626
BsaJI CCNNGG 6 cut(s) 126, 291, 514, 801, 1188, 1330
BsaWI WCCGGW 2 cut(s) 525, 1367
BsaXI ACNNNNNCTCC 4 cut(s) 863, 893, 1424, 1454
Bse118I RCCGGY 4 cut(s) 218, 403, 530, 686
Bse1I ACTGG 2 cut(s) 286, 1392
Bse3DI GCAATG 1 cut(s) 1113
BseAI TCCGGA 1 cut(s) 525
BseBI CCWGG 3 cut(s) 128, 292, 1325
BseDI CCNNGG 6 cut(s) 126, 291, 514, 801, 1188, 1330
BseGI GGATG 4 cut(s) 63, 306, 864, 1055
BseMI GCAATG 1 cut(s) 1113
BseNI ACTGG 2 cut(s) 286, 1392
BseRI GAGGAG 3 cut(s) 8, 11, 14
BseSI GKGCMC 4 cut(s) 506, 893, 1052, 1409
BseXI GCAGC 4 cut(s) 1103, 1115, 1185, 1236
BseYI CCCAGC 1 cut(s) 1099
Bsh1236I CGCG 8 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298
Bsh1285I CGRYCG 1 cut(s) 166
BshNI GGYRCC 1 cut(s) 1364
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 1409
BslFI GGGAC 2 cut(s) 109, 1098
BsmAI GTCTC 3 cut(s) 466, 626, 914
BsmFI GGGAC 2 cut(s) 109, 1098
BsmI GAATGC 1 cut(s) 206
Bso31I GGTCTC 2 cut(s) 466, 626
Bsp120I GGGCCC 2 cut(s) 502, 1048
Bsp1286I GDGCHC 6 cut(s) 9, 506, 893, 1052, 1278, 1409
Bsp13I TCCGGA 1 cut(s) 525
Bsp143I GATC 5 cut(s) 174, 543, 558, 769, 1387
Bsp19I CCATGG 1 cut(s) 1330
BspEI TCCGGA 1 cut(s) 525
BspFNI CGCG 8 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298
BspHI TCATGA 1 cut(s) 1308
BspLI GGNNCC 8 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114, 1366
BspMAI CTGCAG 2 cut(s) 1093, 1203
BspPI GGATC 2 cut(s) 777, 1382
BspT107I GGYRCC 1 cut(s) 1364
BspTNI GGTCTC 2 cut(s) 466, 626
BsrDI GCAATG 1 cut(s) 1113
BsrFI RCCGGY 4 cut(s) 218, 403, 530, 686
BsrI ACTGG 2 cut(s) 286, 1392
BssAI RCCGGY 4 cut(s) 218, 403, 530, 686
BssECI CCNNGG 6 cut(s) 126, 291, 514, 801, 1188, 1330
BssMI GATC 5 cut(s) 174, 543, 558, 769, 1387
BssNI GRCGYC 3 cut(s) 84, 195, 714
BssT1I CCWWGG 3 cut(s) 514, 1188, 1330
Bst2UI CCWGG 3 cut(s) 128, 292, 1325
Bst4CI ACNGT 6 cut(s) 100, 235, 241, 522, 1143, 1285
Bst6I CTCTTC 1 cut(s) 32
BstACI GRCGYC 3 cut(s) 84, 195, 714
BstAPI GCANNNNNTGC 1 cut(s) 400
BstBAI YACGTR 1 cut(s) 1410
BstC8I GCNNGC 9 cut(s) 55, 405, 805, 893, 1041, 1096, 1169, 1244, 1296
BstDSI CCRYGG 2 cut(s) 801, 1330
BstF5I GGATG 4 cut(s) 63, 306, 864, 1055
BstFNI CGCG 8 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298
BstH2I RGCGCY 2 cut(s) 419, 1199
BstHHI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1198
BstKTI GATC 5 cut(s) 177, 546, 561, 772, 1390
BstMAI GTCTC 3 cut(s) 466, 626, 914
BstMBI GATC 5 cut(s) 174, 543, 558, 769, 1387
BstMCI CGRYCG 1 cut(s) 166
BstNI CCWGG 3 cut(s) 128, 292, 1325
BstNSI RCATGY 1 cut(s) 709
BstSCI CCNGG 7 cut(s) 126, 290, 788, 881, 1005, 1062, 1323
BstSFI CTRYAG 2 cut(s) 1089, 1199
BstSLI GKGCMC 4 cut(s) 506, 893, 1052, 1409
BstUI CGCG 8 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298
BstV1I GCAGC 4 cut(s) 1103, 1115, 1185, 1236
BstV2I GAAGAC 1 cut(s) 768
BstX2I RGATCY 2 cut(s) 174, 769
BstXI CCANNNNNNTGG 1 cut(s) 1331
BstYI RGATCY 2 cut(s) 174, 769
BtgI CCRYGG 2 cut(s) 801, 1330
BtgZI GCGATG 4 cut(s) 208, 373, 557, 755
BtrI CACGTC 4 cut(s) 61, 372, 766, 1018
BtsCI GGATG 4 cut(s) 63, 306, 864, 1055
BtsIMutI CAGTG 1 cut(s) 1281
Cac8I GCNNGC 9 cut(s) 55, 405, 805, 893, 1041, 1096, 1169, 1244, 1296
CciI TCATGA 1 cut(s) 1308
CfoI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1198
Cfr10I RCCGGY 4 cut(s) 218, 403, 530, 686
Cfr42I CCGCGG 1 cut(s) 804
CpoI CGGWCCG 1 cut(s) 528
CseI GACGC 4 cut(s) 73, 157, 722, 734
Csp6I GTAC 5 cut(s) 568, 607, 850, 1086, 1411
CspCI CAANNNNNGTGG 2 cut(s) 1425, 1460
CspI CGGWCCG 1 cut(s) 528
CviAII CATG 4 cut(s) 691, 706, 1309, 1331
CviQI GTAC 5 cut(s) 568, 607, 850, 1086, 1411
DpnI GATC 5 cut(s) 176, 545, 560, 771, 1389
DpnII GATC 5 cut(s) 174, 543, 558, 769, 1387
EaeI YGGCCR 1 cut(s) 297
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
EciI GGCGGA 3 cut(s) 40, 857, 1439
Eco130I CCWWGG 3 cut(s) 514, 1188, 1330
Eco24I GRGCYC 4 cut(s) 9, 506, 1052, 1278
Eco31I GGTCTC 2 cut(s) 466, 626
Eco32I GATATC 1 cut(s) 1345
Eco47I GGWCC 4 cut(s) 382, 528, 1112, 1327
Eco57I CTGAAG 1 cut(s) 974
EcoO109I RGGNCCY 4 cut(s) 382, 1048, 1049, 1112
EcoRII CCWGG 3 cut(s) 126, 290, 1323
EcoRV GATATC 1 cut(s) 1345
EcoT14I CCWWGG 3 cut(s) 514, 1188, 1330
EcoT38I GRGCYC 4 cut(s) 9, 506, 1052, 1278
ErhI CCWWGG 3 cut(s) 514, 1188, 1330
FaeI CATG 4 cut(s) 694, 709, 1312, 1334
FaqI GGGAC 2 cut(s) 109, 1098
FatI CATG 4 cut(s) 690, 705, 1308, 1330
FauI CCCGC 6 cut(s) 123, 267, 286, 332, 796, 1441
FblI GTMKAC 1 cut(s) 1148
Fnu4HI GCNGC 8 cut(s) 282, 667, 1092, 1104, 1194, 1199, 1225, 1299
FokI GGATG 4 cut(s) 50, 293, 851, 1042
FriOI GRGCYC 4 cut(s) 9, 506, 1052, 1278
Fsp4HI GCNGC 8 cut(s) 282, 667, 1092, 1104, 1194, 1199, 1225, 1299
FspBI CTAG 1 cut(s) 773
FspI TGCGCA 1 cut(s) 1134
GlaI GCGC 6 cut(s) 205, 393, 417, 936, 1134, 1197
GluI GCNGC 8 cut(s) 282, 667, 1092, 1104, 1194, 1199, 1225, 1299
GsaI CCCAGC 1 cut(s) 1103
HaeII RGCGCY 2 cut(s) 419, 1199
HgaI GACGC 4 cut(s) 73, 157, 722, 734
HhaI GCGC 6 cut(s) 206, 394, 418, 937, 1135, 1198
Hin1I GRCGYC 3 cut(s) 84, 195, 714
Hin1II CATG 4 cut(s) 694, 709, 1312, 1334
Hin6I GCGC 6 cut(s) 204, 392, 416, 935, 1133, 1196
HinP1I GCGC 6 cut(s) 204, 392, 416, 935, 1133, 1196
HincII GTYRAC 3 cut(s) 88, 601, 1149
HindII GTYRAC 3 cut(s) 88, 601, 1149
HinfI GANTC 2 cut(s) 342, 1371
HphI GGTGA 6 cut(s) 61, 223, 229, 439, 618, 1369
Hpy166II GTNNAC 6 cut(s) 88, 601, 1012, 1149, 1237, 1407
Hpy188I TCNGA 2 cut(s) 376, 970
Hpy188III TCNNGA 7 cut(s) 145, 172, 352, 463, 526, 919, 1309
Hpy8I GTNNAC 6 cut(s) 88, 601, 1012, 1149, 1237, 1407
Hpy99I CGWCG 9 cut(s) 197, 245, 353, 376, 716, 1019, 1147, 1150, 1153
HpyAV CCTTC 6 cut(s) 148, 325, 406, 742, 880, 1423
HpyCH4III ACNGT 6 cut(s) 100, 235, 241, 522, 1143, 1285
HpyCH4V TGCA 5 cut(s) 1091, 1201, 1224, 1242, 1407
Hsp92I GRCGYC 3 cut(s) 84, 195, 714
Hsp92II CATG 4 cut(s) 694, 709, 1312, 1334
HspAI GCGC 6 cut(s) 204, 392, 416, 935, 1133, 1196
KflI GGGWCCC 1 cut(s) 1112
Kpn2I TCCGGA 1 cut(s) 525
KroI GCCGGC 1 cut(s) 403
KroNI GCCGGC 1 cut(s) 405
KspI CCGCGG 1 cut(s) 804
Kzo9I GATC 5 cut(s) 174, 543, 558, 769, 1387
LmnI GCTCC 6 cut(s) 4, 21, 279, 423, 884, 970
Lsp1109I GCAGC 4 cut(s) 1103, 1115, 1185, 1236
LweI GCATC 4 cut(s) 231, 403, 891, 1076
MaeI CTAG 1 cut(s) 773
MaeIII GTNAC 5 cut(s) 229, 235, 245, 1375, 1394
MalI GATC 5 cut(s) 176, 545, 560, 771, 1389
MboI GATC 5 cut(s) 174, 543, 558, 769, 1387
MboII GAAGA 5 cut(s) 19, 169, 757, 773, 1216
MflI RGATCY 2 cut(s) 174, 769
MhlI GDGCHC 6 cut(s) 9, 506, 893, 1052, 1278, 1409
MluCI AATT 2 cut(s) 976, 1478
MlyI GAGTC 1 cut(s) 1380
MmeI TCCRAC 2 cut(s) 354, 948
MroI TCCGGA 1 cut(s) 525
MroNI GCCGGC 1 cut(s) 403
MseI TTAA 1 cut(s) 1521
MslI CAYNNNNRTG 2 cut(s) 689, 704
MspA1I CMGCKG 1 cut(s) 803
MspR9I CCNGG 7 cut(s) 128, 292, 790, 883, 1007, 1064, 1325
Mva1269I GAATGC 1 cut(s) 206
MvaI CCWGG 3 cut(s) 128, 292, 1325
MvnI CGCG 8 cut(s) 168, 204, 392, 728, 803, 842, 935, 1298
NaeI GCCGGC 1 cut(s) 405
NciI CCSGG 4 cut(s) 790, 883, 1007, 1064
NcoI CCATGG 1 cut(s) 1330
NdeII GATC 5 cut(s) 174, 543, 558, 769, 1387
NgoMIV GCCGGC 1 cut(s) 403
NlaIII CATG 4 cut(s) 694, 709, 1312, 1334
NlaIV GGNNCC 8 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114, 1366
NmeAIII GCCGAG 3 cut(s) 404, 459, 716
NmuCI GTSAC 3 cut(s) 229, 235, 1375
NsbI TGCGCA 1 cut(s) 1134
NspI RCATGY 1 cut(s) 709
PagI TCATGA 1 cut(s) 1308
PciI ACATGT 1 cut(s) 705
PcsI WCGNNNNNNNCGW 4 cut(s) 231, 249, 506, 1302
PctI GAATGC 1 cut(s) 206
PdiI GCCGGC 1 cut(s) 405
PfeI GAWTC 1 cut(s) 342
PflFI GACNNNGTC 1 cut(s) 167
PfoI TCCNGGA 1 cut(s) 881
PkrI GCNGC 8 cut(s) 283, 668, 1093, 1105, 1195, 1200, 1226, 1300
PleI GAGTC 1 cut(s) 1379
PpsI GAGTC 1 cut(s) 1379
Ppu21I YACGTR 1 cut(s) 1410
PpuMI RGGWCCY 2 cut(s) 382, 1112
PscI ACATGT 1 cut(s) 705
Psp5II RGGWCCY 2 cut(s) 382, 1112
Psp6I CCWGG 3 cut(s) 126, 290, 1323
PspFI CCCAGC 1 cut(s) 1099
PspGI CCWGG 3 cut(s) 126, 290, 1323
PspN4I GGNNCC 8 cut(s) 6, 504, 860, 1050, 1051, 1113, 1114, 1366
PspOMI GGGCCC 2 cut(s) 502, 1048
PspPPI RGGWCCY 2 cut(s) 382, 1112
PsrI GAACNNNNNNTAC 4 cut(s) 1199, 1231, 1304, 1336
PstI CTGCAG 2 cut(s) 1093, 1203
PsuI RGATCY 2 cut(s) 174, 769
PsyI GACNNNGTC 1 cut(s) 167
RsaI GTAC 5 cut(s) 569, 608, 851, 1087, 1412
RsaNI GTAC 5 cut(s) 568, 607, 850, 1086, 1411
RseI CAYNNNNRTG 2 cut(s) 689, 704
Rsr2I CGGWCCG 1 cut(s) 528
RsrII CGGWCCG 1 cut(s) 528
SacII CCGCGG 1 cut(s) 804
SalI GTCGAC 1 cut(s) 1147
SaqAI TTAA 1 cut(s) 1521
SatI GCNGC 8 cut(s) 282, 667, 1092, 1104, 1194, 1199, 1225, 1299
Sau3AI GATC 5 cut(s) 174, 543, 558, 769, 1387
ScaI AGTACT 1 cut(s) 1087
SchI GAGTC 1 cut(s) 1380
ScrFI CCNGG 7 cut(s) 128, 292, 790, 883, 1007, 1064, 1325
SduI GDGCHC 6 cut(s) 9, 506, 893, 1052, 1278, 1409
SfaNI GCATC 4 cut(s) 231, 403, 891, 1076
SfcI CTRYAG 2 cut(s) 1089, 1199
Sfr303I CCGCGG 1 cut(s) 804
SgrBI CCGCGG 1 cut(s) 804
SgrDI CGTCGACG 1 cut(s) 1147
SinI GGWCC 4 cut(s) 382, 528, 1112, 1327
SmiMI CAYNNNNRTG 2 cut(s) 689, 704
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 2 cut(s) 976, 1478
SspI AATATT 1 cut(s) 1525
SspMI CTAG 1 cut(s) 773
StyD4I CCNGG 7 cut(s) 126, 290, 788, 881, 1005, 1062, 1323
StyI CCWWGG 3 cut(s) 514, 1188, 1330
TaaI ACNGT 6 cut(s) 100, 235, 241, 522, 1143, 1285
TaqI TCGA 9 cut(s) 162, 180, 464, 552, 675, 711, 918, 1002, 1148
TaqII GACCGA 1 cut(s) 608
TasI AATT 2 cut(s) 976, 1478
TatI WGTACW 1 cut(s) 1085
TauI GCSGC 4 cut(s) 284, 669, 1196, 1301
TfiI GAWTC 1 cut(s) 342
Tru1I TTAA 1 cut(s) 1521
Tru9I TTAA 1 cut(s) 1521
TscAI CASTG 1 cut(s) 1288
TseFI GTSAC 3 cut(s) 229, 235, 1375
TseI GCWGC 4 cut(s) 1091, 1103, 1198, 1224
Tsp45I GTSAC 3 cut(s) 229, 235, 1375
TspDTI ATGAA 5 cut(s) 425, 707, 758, 774, 1325
TspGWI ACGGA 1 cut(s) 1245
TspRI CASTG 1 cut(s) 1288
Tth111I GACNNNGTC 1 cut(s) 167
VneI GTGCAC 1 cut(s) 1405
VpaK11BI GGWCC 4 cut(s) 382, 528, 1112, 1327
XceI RCATGY 1 cut(s) 709
XmiI GTMKAC 1 cut(s) 1148
XspI CTAG 1 cut(s) 773
ZraI GACGTC 1 cut(s) 196
ZrmI AGTACT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.