Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0012552

Physical Location & Seq

Genomic Coordinates Reverse (-)

9642991 .. 9645080

Gene Structure 2090 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1109000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGCAAACTCTGTACCTTGTGATACATCGCACTCTCGTTCAGGCAAATCGTCGAACAGGTTACGTCCCAGATTTTTCTGCCCAGAAAATTTCATCGGGCTTCAAATTTTTTCTCTGCACCCAAACACCAAATGATTTTCCCGAGAAAATCGTCGAGTCCAAACAAGCAGAACCCAGGTCCTGCTTATCTTACAGGATTGAGAAGCTGCCGAGTGGAGAACCAGTTGGGTCTGCCTTCCAGAGCTGGATGGGTGATGGCTTCCCCATTCATAGAGGTGACGTCTTCCACGCCATTAACCGCCTCAGGAAGCTCAAGAAGAATAAACGCGCTCTTGAGGTAATGGAATGGGTGATCAGAGAAAGGCCCTACAGGCCAAAGGAACTAGACTACTCTTATTTGCTGGAATTTACAACCAAGTTTCATGGGATATCTCAAGGTAAAGAACTCTTTACCCGCGTTCCATCGGAGTTTCAAAACGATCTCCTTTACAACAATCTTGTGATTGCCTGCTTGGATAAGGGTGCAATAAGGCTTCCGCTCGAGTTGATGAAGAAAATGAGGGAATTGGGCCATCCCATCTCGCACTTGGTTTTCAATCGGCTCATTGTTCTTCATTCCTCTTCAAGGCGTAAAAAGTTGATAGCAAAAATCCTCGCTCAAATGAGGGCCGATAAAGTTCCCCCACATGCCTCGACATTCAACATTCTCATGAAAATAGAAGCGAACGAGTACAGTATTGAGGGATTGATGAAGGTATACTCTGATATGAAGCGAGCAAATGTTGAGCCAAATGAAATATCTTACTGCATCATAGCGACTGCCCATGCAGTGGCAAGGTTGTATACGGCCGCTGAAGCGTATGTTGAAGCCTTGGAGAAGTCAGTTACGGGTAACAACTGGTCAATGTTAGATGTTCTAATTATGTTGTATGGGTATTTGGGGAAGGAGAAGCAATTGGAGAAAACTTGGGGCTTAGTGAAGGAACTGCCCCATGTTAGGTCTAAAAGTTATGTGCTGGTAGTTGAAGCATTTGGTAGAATCGGACAACTCAACCGAGCTGAAGAACTTTGGTTAGAGATGAAGTCGGTAAAAGGGATGAAAACCACTGAGCAGTTCAATTCCATGATATCTGTCTATTCCAAACATGGCCTTATCGATAAAGCATCCAAGGTTTTCCGGGAGATAAAGATGGTTGGGTGCCAACCAAATGCCATAACTTTCCGGCATCTTGCTCTGGGTTGCTTAAAAGCAGGATTGGTAGAGGAAGCTGTTAAGACTTTGGAGTTGGGGATGAGTTCGACGATGAGCAACGTGGTGAGGAATTCTACCCCGTGGTTGGAGACCACTCTTTCGATAATCGAGGGTTTTGCCGAGAAGGGTGATGTAGGGAATGCTGAGAAGTTGTTTGATGAACTTGCAAAAGCCAAGTATGCAAGGCATACTTTTGTGTACAACACTTTGATTAAGGCTTATGTAAAAGCCAAAGTTTATGATTCAAACCTTTTGAAGAGGATGATTCTTGGCGGCGCAAGGCCGGATGCCGAAACCTATAGTCTGATGAAACTTGCCGAGCAGTTTCGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010035 GO:0010038 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

529

Amino Acids

60.22

Weight (kDa)

9.48

Isoelectric Point (pI)

35.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	228 - 274	5e-07	PPR repeat family
PPR_2	PF13041	372 - 414	6.4e-09	PPR repeat family
PPR	PF01535	372 - 400	1.1e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012552)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07590
fragaria_vesca	FvH4_3g36060 FvH4_3g36060
malus_domestica	MD11G1109000.v1.1
prunus_persica	Prupe.6G077700_v2.0.a1
pyrus_communis	pycom11g09010
rosa_chinensis	RchiOBHm_Chr5g0064501
rosa_laevigata	RLG00000035729
rosa_multiflora	Rmu_sc0003352.1_g000001 Rmu_sc0018367.1_g000006 Rmu_sc0032871.1_g000002
rosa_roxburghii	Rroxscaffold_1G00016520
rosa_rugosa	Rorug05G0365500 Rorug05G0365600
rosa_samantha	Rh5AG423600 Rh5BG439000 Rh5CG461700 Rh5DG452300
rosa_wichuraiana	Rw5G039820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	282
AccB1I	GGYRCC	1 cut(s)	1197
AccB7I	CCANNNNNTGG	1 cut(s)	829
AccBSI	CCGCTC	1 cut(s)	538
AccI	GTMKAC	2 cut(s)	756, 842
AccII	CGCG	2 cut(s)	327, 456
AciI	CCGC	5 cut(s)	298, 454, 536, 849, 1524
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	4 cut(s)	87, 104, 404, 1321
AcuI	CTGAAG	2 cut(s)	873, 1080
AcyI	GRCGYC	1 cut(s)	279
AfaI	GTAC	3 cut(s)	14, 731, 1451
AfiI	CCNNNNNNNGG	4 cut(s)	624, 829, 996, 1336
AjnI	CCWGG	1 cut(s)	173
AluBI	AGCT	5 cut(s)	205, 243, 310, 1058, 1268
AluI	AGCT	5 cut(s)	205, 243, 310, 1058, 1268
Alw26I	GTCTC	1 cut(s)	1334
AlwNI	CAGNNNCTG	1 cut(s)	180
Ama87I	CYCGRG	2 cut(s)	140, 539
AoxI	GGCC	7 cut(s)	362, 371, 568, 666, 846, 1147, 1532
ApeKI	GCWGC	1 cut(s)	205
ApoI	RAATTY	4 cut(s)	87, 104, 404, 1321
ArsI	GACNNNNNNTTYG	2 cut(s)	1333, 1365
AspLEI	GCGC	2 cut(s)	329, 1529
AspS9I	GGNCC	4 cut(s)	177, 363, 568, 666
AsuC2I	CCSGG	1 cut(s)	1178
AsuHPI	GGTGA	5 cut(s)	263, 287, 361, 1327, 1391
AsuII	TTCGAA	1 cut(s)	1579
AvaI	CYCGRG	2 cut(s)	140, 539
AvaII	GGWCC	1 cut(s)	177
AxyI	CCTNAGG	1 cut(s)	302
BanI	GGYRCC	1 cut(s)	1197
BbsI	GAAGAC	1 cut(s)	274
BbvI	GCAGC	1 cut(s)	192
BccI	CCATC	6 cut(s)	241, 248, 469, 579, 584, 1183
BceAI	ACGGC	1 cut(s)	861
BcgI	CGANNNNNNTGC	2 cut(s)	1349, 1383
BciT130I	CCWGG	1 cut(s)	175
BclI	TGATCA	1 cut(s)	351
BcnI	CCSGG	1 cut(s)	1178
BcoDI	GTCTC	1 cut(s)	1334
BfaI	CTAG	1 cut(s)	383
BfmI	CTRYAG	2 cut(s)	367, 1549
BglI	GCCNNNNNGGC	1 cut(s)	370
BisI	GCNGC	3 cut(s)	206, 849, 1525
BlsI	GCNGC	3 cut(s)	207, 850, 1526
Bme1390I	CCNGG	2 cut(s)	175, 1178
Bme18I	GGWCC	1 cut(s)	177
BmeT110I	CYCGRG	2 cut(s)	140, 539
BmgT120I	GGNCC	4 cut(s)	177, 363, 568, 666
BmiI	GGNNCC	1 cut(s)	1199
BmrFI	CCNGG	2 cut(s)	175, 1178
BmsI	GCATC	4 cut(s)	816, 1172, 1234, 1528
BpiI	GAAGAC	1 cut(s)	274
Bpu14I	TTCGAA	1 cut(s)	1579
BpuEI	CTTGAG	3 cut(s)	296, 353, 417
BpuMI	CCSGG	1 cut(s)	1178
Bsa29I	ATCGAT	1 cut(s)	1155
BsaHI	GRCGYC	1 cut(s)	279
BsaI	GGTCTC	1 cut(s)	1334
BsaJI	CCNNGG	4 cut(s)	173, 870, 1167, 1331
BsaXI	ACNNNNNCTCC	2 cut(s)	207, 237
Bsc4I	CCNNNNNNNGG	4 cut(s)	624, 829, 996, 1336
Bse1I	ACTGG	2 cut(s)	221, 902
Bse21I	CCTNAGG	1 cut(s)	302
BseBI	CCWGG	1 cut(s)	175
BseCI	ATCGAT	1 cut(s)	1155
BseDI	CCNNGG	4 cut(s)	173, 870, 1167, 1331
BseGI	GGATG	7 cut(s)	252, 571, 1101, 1163, 1296, 1518, 1543
BseLI	CCNNNNNNNGG	4 cut(s)	624, 829, 996, 1336
BseMII	CTCAG	3 cut(s)	316, 1098, 1386
BseNI	ACTGG	2 cut(s)	221, 902
BseX3I	CGGCCG	1 cut(s)	846
BseXI	GCAGC	1 cut(s)	192
BsgI	GTGCAG	1 cut(s)	100
Bsh1236I	CGCG	2 cut(s)	327, 456
Bsh1285I	CGRYCG	1 cut(s)	849
BshFI	GGCC	7 cut(s)	364, 373, 570, 668, 848, 1149, 1534
BshNI	GGYRCC	1 cut(s)	1197
BshVI	ATCGAT	1 cut(s)	1155
BsiEI	CGRYCG	1 cut(s)	849
BsiHKCI	CYCGRG	2 cut(s)	140, 539
BsiSI	CCGG	3 cut(s)	1177, 1222, 1535
BslFI	GGGAC	1 cut(s)	50
BslI	CCNNNNNNNGG	4 cut(s)	624, 829, 996, 1336
BsmAI	GTCTC	1 cut(s)	1334
BsmFI	GGGAC	1 cut(s)	50
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	7 cut(s)	364, 373, 570, 668, 848, 1149, 1534
Bso31I	GGTCTC	1 cut(s)	1334
BsoBI	CYCGRG	2 cut(s)	140, 539
Bsp119I	TTCGAA	1 cut(s)	1579
Bsp1407I	TGTACA	1 cut(s)	1449
Bsp143I	GATC	2 cut(s)	351, 478
BspACI	CCGC	5 cut(s)	298, 454, 536, 849, 1524
BspANI	GGCC	7 cut(s)	364, 373, 570, 668, 848, 1149, 1534
BspCNI	CTCAG	3 cut(s)	315, 1099, 1387
BspDI	ATCGAT	1 cut(s)	1155
BspFNI	CGCG	2 cut(s)	327, 456
BspHI	TCATGA	1 cut(s)	708
BspLI	GGNNCC	1 cut(s)	1199
BspT104I	TTCGAA	1 cut(s)	1579
BspT107I	GGYRCC	1 cut(s)	1197
BspTNI	GGTCTC	1 cut(s)	1334
BsrBI	CCGCTC	1 cut(s)	538
BsrGI	TGTACA	1 cut(s)	1449
BsrI	ACTGG	2 cut(s)	221, 902
BssECI	CCNNGG	4 cut(s)	173, 870, 1167, 1331
BssMI	GATC	2 cut(s)	351, 478
BssNAI	GTATAC	2 cut(s)	757, 843
BssNI	GRCGYC	1 cut(s)	279
BssT1I	CCWWGG	2 cut(s)	870, 1167
Bst1107I	GTATAC	2 cut(s)	757, 843
Bst2UI	CCWGG	1 cut(s)	175
Bst4CI	ACNGT	1 cut(s)	734
Bst6I	CTCTTC	2 cut(s)	625, 1502
BstACI	GRCGYC	1 cut(s)	279
BstAUI	TGTACA	1 cut(s)	1449
BstBI	TTCGAA	1 cut(s)	1579
BstC8I	GCNNGC	2 cut(s)	508, 774
BstDEI	CTNAG	4 cut(s)	302, 973, 1107, 1395
BstDSI	CCRYGG	1 cut(s)	1331
BstENI	CCTNNNNNAGG	1 cut(s)	622
BstF5I	GGATG	7 cut(s)	252, 571, 1101, 1163, 1296, 1518, 1543
BstFNI	CGCG	2 cut(s)	327, 456
BstHHI	GCGC	2 cut(s)	329, 1529
BstKTI	GATC	2 cut(s)	354, 481
BstMAI	GTCTC	1 cut(s)	1334
BstMBI	GATC	2 cut(s)	351, 478
BstMCI	CGRYCG	1 cut(s)	849
BstMWI	GCNNNNNNNGC	3 cut(s)	370, 854, 1430
BstNI	CCWGG	1 cut(s)	175
BstNSI	RCATGY	1 cut(s)	689
BstSCI	CCNGG	2 cut(s)	173, 1176
BstSFI	CTRYAG	2 cut(s)	367, 1549
BstUI	CGCG	2 cut(s)	327, 456
BstV1I	GCAGC	1 cut(s)	192
BstV2I	GAAGAC	1 cut(s)	274
BstZ17I	GTATAC	2 cut(s)	757, 843
BstZI	CGGCCG	1 cut(s)	846
Bsu15I	ATCGAT	1 cut(s)	1155
Bsu36I	CCTNAGG	1 cut(s)	302
BsuRI	GGCC	7 cut(s)	364, 373, 570, 668, 848, 1149, 1534
BsuTUI	ATCGAT	1 cut(s)	1155
BtgI	CCRYGG	1 cut(s)	1331
BtgZI	GCGATG	1 cut(s)	11
BtsCI	GGATG	7 cut(s)	252, 571, 1101, 1163, 1296, 1518, 1543
BtsI	GCAGTG	1 cut(s)	834
BtsIMutI	CAGTG	2 cut(s)	834, 1104
Cac8I	GCNNGC	2 cut(s)	508, 774
CaiI	CAGNNNCTG	1 cut(s)	180
CciI	TCATGA	1 cut(s)	708
CfoI	GCGC	2 cut(s)	329, 1529
Cfr13I	GGNCC	4 cut(s)	177, 363, 568, 666
ClaI	ATCGAT	1 cut(s)	1155
Csp6I	GTAC	3 cut(s)	13, 730, 1450
CviAII	CATG	7 cut(s)	422, 686, 709, 824, 992, 1123, 1145
CviQI	GTAC	3 cut(s)	13, 730, 1450
DdeI	CTNAG	4 cut(s)	302, 973, 1107, 1395
DpnI	GATC	2 cut(s)	353, 480
DpnII	GATC	2 cut(s)	351, 478
EaeI	YGGCCR	1 cut(s)	846
EagI	CGGCCG	1 cut(s)	846
Eam1104I	CTCTTC	2 cut(s)	625, 1502
EarI	CTCTTC	2 cut(s)	625, 1502
EclXI	CGGCCG	1 cut(s)	846
Eco130I	CCWWGG	2 cut(s)	870, 1167
Eco31I	GGTCTC	1 cut(s)	1334
Eco32I	GATATC	2 cut(s)	429, 1128
Eco47I	GGWCC	1 cut(s)	177
Eco52I	CGGCCG	1 cut(s)	846
Eco57I	CTGAAG	2 cut(s)	873, 1080
Eco81I	CCTNAGG	1 cut(s)	302
Eco88I	CYCGRG	2 cut(s)	140, 539
EcoNI	CCTNNNNNAGG	1 cut(s)	622
EcoO109I	RGGNCCY	2 cut(s)	177, 363
EcoRI	GAATTC	1 cut(s)	1321
EcoRII	CCWGG	1 cut(s)	173
EcoRV	GATATC	2 cut(s)	429, 1128
EcoT14I	CCWWGG	2 cut(s)	870, 1167
ErhI	CCWWGG	2 cut(s)	870, 1167
FaeI	CATG	7 cut(s)	425, 689, 712, 827, 995, 1126, 1148
FalI	AAGNNNNNCTT	2 cut(s)	1426, 1458
FaqI	GGGAC	1 cut(s)	50
FatI	CATG	7 cut(s)	421, 685, 708, 823, 991, 1122, 1144
FauI	CCCGC	1 cut(s)	461
FbaI	TGATCA	1 cut(s)	351
FblI	GTMKAC	2 cut(s)	756, 842
Fnu4HI	GCNGC	3 cut(s)	206, 849, 1525
FokI	GGATG	7 cut(s)	259, 558, 1108, 1150, 1303, 1525, 1550
Fsp4HI	GCNGC	3 cut(s)	206, 849, 1525
FspBI	CTAG	1 cut(s)	383
GlaI	GCGC	2 cut(s)	328, 1528
GluI	GCNGC	3 cut(s)	206, 849, 1525
HaeIII	GGCC	7 cut(s)	364, 373, 570, 668, 848, 1149, 1534
HapII	CCGG	3 cut(s)	1177, 1222, 1535
HhaI	GCGC	2 cut(s)	329, 1529
Hin1I	GRCGYC	1 cut(s)	279
Hin1II	CATG	7 cut(s)	425, 689, 712, 827, 995, 1126, 1148
Hin6I	GCGC	2 cut(s)	327, 1527
HinP1I	GCGC	2 cut(s)	327, 1527
HinfI	GANTC	4 cut(s)	155, 1038, 1493, 1516
HpaII	CCGG	3 cut(s)	1177, 1222, 1535
HphI	GGTGA	5 cut(s)	263, 287, 361, 1327, 1391
Hpy166II	GTNNAC	3 cut(s)	757, 843, 1450
Hpy188I	TCNGA	5 cut(s)	356, 466, 763, 1043, 1557
Hpy188III	TCNNGA	6 cut(s)	140, 238, 304, 313, 332, 709
Hpy8I	GTNNAC	3 cut(s)	757, 843, 1450
Hpy99I	CGWCG	3 cut(s)	54, 155, 1303
HpyAV	CCTTC	5 cut(s)	244, 745, 937, 973, 1369
HpyCH4III	ACNGT	1 cut(s)	734
HpyCH4IV	ACGT	3 cut(s)	63, 279, 1311
HpyCH4V	TGCA	7 cut(s)	4, 117, 524, 807, 827, 1418, 1433
HpyF10VI	GCNNNNNNNGC	3 cut(s)	370, 854, 1430
HpyF3I	CTNAG	4 cut(s)	302, 973, 1107, 1395
HpySE526I	ACGT	3 cut(s)	63, 279, 1311
Hsp92I	GRCGYC	1 cut(s)	279
Hsp92II	CATG	7 cut(s)	425, 689, 712, 827, 995, 1126, 1148
HspAI	GCGC	2 cut(s)	327, 1527
Ksp22I	TGATCA	1 cut(s)	351
Kzo9I	GATC	2 cut(s)	351, 478
Lsp1109I	GCAGC	1 cut(s)	192
LweI	GCATC	4 cut(s)	816, 1172, 1234, 1528
MaeI	CTAG	1 cut(s)	383
MaeII	ACGT	3 cut(s)	63, 279, 1311
MaeIII	GTNAC	4 cut(s)	59, 275, 883, 890
MalI	GATC	2 cut(s)	353, 480
MbiI	CCGCTC	1 cut(s)	538
MboI	GATC	2 cut(s)	351, 478
MboII	GAAGA	7 cut(s)	274, 328, 562, 602, 612, 1073, 1519
MfeI	CAATTG	1 cut(s)	953
MluCI	AATT	8 cut(s)	87, 104, 404, 563, 918, 953, 1117, 1321
MlyI	GAGTC	1 cut(s)	164
MmeI	TCCRAC	1 cut(s)	1317
MseI	TTAA	4 cut(s)	294, 1244, 1272, 1464
MslI	CAYNNNNRTG	2 cut(s)	273, 707
MspA1I	CMGCKG	1 cut(s)	851
MspI	CCGG	3 cut(s)	1177, 1222, 1535
MspR9I	CCNGG	2 cut(s)	175, 1178
MunI	CAATTG	1 cut(s)	953
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	1 cut(s)	175
MvnI	CGCG	2 cut(s)	327, 456
MwoI	GCNNNNNNNGC	3 cut(s)	370, 854, 1430
NciI	CCSGG	1 cut(s)	1178
NdeII	GATC	2 cut(s)	351, 478
NlaIII	CATG	7 cut(s)	425, 689, 712, 827, 995, 1126, 1148
NlaIV	GGNNCC	1 cut(s)	1199
NmeAIII	GCCGAG	2 cut(s)	234, 1396
NmuCI	GTSAC	1 cut(s)	275
NspI	RCATGY	1 cut(s)	689
NspV	TTCGAA	1 cut(s)	1579
PaeR7I	CTCGAG	1 cut(s)	539
PagI	TCATGA	1 cut(s)	708
PctI	GAATGC	1 cut(s)	1396
PfeI	GAWTC	3 cut(s)	1038, 1493, 1516
PflMI	CCANNNNNTGG	1 cut(s)	829
PfoI	TCCNGGA	1 cut(s)	1176
PkrI	GCNGC	3 cut(s)	207, 850, 1526
PleI	GAGTC	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	163
PpuMI	RGGWCCY	1 cut(s)	177
Psp5II	RGGWCCY	1 cut(s)	177
Psp6I	CCWGG	1 cut(s)	173
PspGI	CCWGG	1 cut(s)	173
PspN4I	GGNNCC	1 cut(s)	1199
PspPI	GGNCC	4 cut(s)	177, 363, 568, 666
PspPPI	RGGWCCY	1 cut(s)	177
PspXI	VCTCGAGB	1 cut(s)	539
PstNI	CAGNNNCTG	1 cut(s)	180
RsaI	GTAC	3 cut(s)	14, 731, 1451
RsaNI	GTAC	3 cut(s)	13, 730, 1450
RseI	CAYNNNNRTG	2 cut(s)	273, 707
SaqAI	TTAA	4 cut(s)	294, 1244, 1272, 1464
SatI	GCNGC	3 cut(s)	206, 849, 1525
Sau3AI	GATC	2 cut(s)	351, 478
Sau96I	GGNCC	4 cut(s)	177, 363, 568, 666
SchI	GAGTC	1 cut(s)	164
ScrFI	CCNGG	2 cut(s)	175, 1178
SfaNI	GCATC	4 cut(s)	816, 1172, 1234, 1528
SfcI	CTRYAG	2 cut(s)	367, 1549
SfiI	GGCCNNNNNGGCC	1 cut(s)	370
Sfr274I	CTCGAG	1 cut(s)	539
SfuI	TTCGAA	1 cut(s)	1579
SinI	GGWCC	1 cut(s)	177
SlaI	CTCGAG	1 cut(s)	539
SmiMI	CAYNNNNRTG	2 cut(s)	273, 707
SmlI	CTYRAG	4 cut(s)	311, 332, 432, 539
SmoI	CTYRAG	4 cut(s)	311, 332, 432, 539
Sse9I	AATT	8 cut(s)	87, 104, 404, 563, 918, 953, 1117, 1321
SsiI	CCGC	5 cut(s)	298, 454, 536, 849, 1524
SspMI	CTAG	1 cut(s)	383
StyD4I	CCNGG	2 cut(s)	173, 1176
StyI	CCWWGG	2 cut(s)	870, 1167
TaaI	ACNGT	1 cut(s)	734
TaiI	ACGT	3 cut(s)	66, 282, 1314
TaqI	TCGA	9 cut(s)	52, 153, 540, 692, 1155, 1298, 1352, 1359, 1579
TasI	AATT	8 cut(s)	87, 104, 404, 563, 918, 953, 1117, 1321
TatI	WGTACW	2 cut(s)	729, 1449
TauI	GCSGC	2 cut(s)	851, 1527
TfiI	GAWTC	3 cut(s)	1038, 1493, 1516
Tru1I	TTAA	4 cut(s)	294, 1244, 1272, 1464
Tru9I	TTAA	4 cut(s)	294, 1244, 1272, 1464
TscAI	CASTG	2 cut(s)	834, 1111
TseFI	GTSAC	1 cut(s)	275
TseI	GCWGC	1 cut(s)	205
Tsp45I	GTSAC	1 cut(s)	275
TspRI	CASTG	2 cut(s)	834, 1111
Van91I	CCANNNNNTGG	1 cut(s)	829
VpaK11BI	GGWCC	1 cut(s)	177
XagI	CCTNNNNNAGG	1 cut(s)	622
XapI	RAATTY	4 cut(s)	87, 104, 404, 1321
XceI	RCATGY	1 cut(s)	689
XcmI	CCANNNNNNNNNTGG	1 cut(s)	583
XhoI	CTCGAG	1 cut(s)	539
XmiI	GTMKAC	2 cut(s)	756, 842
XspI	CTAG	1 cut(s)	383
ZraI	GACGTC	1 cut(s)	280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.