MD11G1139800.v1.1

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0014999
Physical Location & Seq
Reverse (-)
12920041 .. 12925356
5316 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1139800.v1.1.491

Sequence Viewer

Length: 2184 bp
ATGGGAAGCAAATGGAGGAAAGCTAAGCTTGCTCTTGGGTTGAACACATGTCTCTATGTTCCTCAAACTAGAGAGGAGCCGCCACCCGCATCGAACGATGCTGCCGCATCTGTATTATCCGACGCCGTTTCGTCCTCCTCTCTGCTTTCTCCGATGGGTGCTGGCTCCGACTGCCGACCCACCACGCCCACACCGTCGTCTTCCGGTCTTCGGTTGCCCAAAACTGGAACCAAGTCCTCCAAGACCTGTGCAATATGCTTGACGACCATGAAGACAGGACAGGGCCATGCCATTTTCACTGCAGAGTGCTCCCACTCTTTCCACTTCCACTGTATTACTTCTAATGTAAAACATGGAAACCAAATTTGTCCAGTATGCAGAGCAAAGTGGAAAGAAATCCCCTTTCAGAACCCTGCTCCTGATCTTTCACGCGGTGCTTCTAGAATTAACACTGTTGGTTGGCCCCAAGATGATGCATGGATGACTGTTTTACGACAAATTCCTCCCCCACGCCTTGATGCAAGCCGACCGGTTTCTTCACTCTTTCACTCTCCCGAACCAGCTATATTTGACGATGATGAAAGCTTAGATCAACAACCTGAGATTTCCAACAAGAGTGCATCTGTCGAAGATGCTGATGATAACAATTCCATTGGAACAATAGAGGTCAAAACATATCCTGAAGTTATGGCTGTTCAAAGATCAGCCTCTCATGATAACTTCACTGTTCTAATCCATCTTAAGGCTCCTCTTACAAGTGAAAGACATATTAGCAGCAGAAATCAGACACCAGTATCTGAAAATTCTCGTGCTCCAGTAGATCTTGTGACAGTGCTTGATGTCAGTGGAAGCATGGCAGGTACAAAGCTTGCTTTGATGAAACGGGCGATGGGGTTTGTGGTACAGAACCTTGGTCCATCTGATCGGCTGTCTGTAATTGCCTTCTCCTCTACAGCCCGCCGGCTTTTTCCCCTTCGTCGGATGACTGATGCTGGGAGGCAAGATGCATTGCAGGCTGTAAACTCTCTGGTTTCAAATGGTGGGACAAACATTGCTGAGGCTCTTAGGAAAGGTACCAAGGTGTTAGTAGACCGCAAGTGGAAGAACCCAGTTTGCAGTATCATACTACTGTCAGATGGGCAGGATACATACACTGTCAATAGTCCTAGTGGGATCCATCCACGAACAGATTACCAATCACTTATCCCAATCTCTATCCGTCGCAATAATGCAGCTGGCTTGCAGATTCCCGTTCATGCATTTGGATTTGGTGCAGATCATGATGCTGCCTCGATGCATTCAATCTCGGAAACTTCTGGTGGGACATTTTCTTTCATAGAAGCTGAGGGTGTGATTCAGGATGCATTTGCCCAGTGTATTGGCGGCCTTTTAAGTGTGGTAGTGCAAGAACTAAAGGTCAGAATTGAGTGCATTCACCCGAGTTTGCAACTTGGTTCAATAAAGGCAGGGAGTTACAGAACCAGCATGACTGCTGCTGCAAGAATGGGTTCTATTGATGTTGGCGACCTGTATGCCGAAGAGGAAAGGGATTTTTTAGTGACAATCAATATTCCAGATGATGTGTCCAGTAATGACATGTCGCTGGTAAAGGTTAGATGTGTTTACAGAGATCCCATAACGAAAGATTTGGTGAATTTGGAAGAAGGCAGTGAAGTCACGATCCAAAGGCCTGAAGTAGTAGGACAACTAATAGTGTCAATGGAAGTAGACAGGCAGCGGAATAGGCTTCGTGCAGCAGAAGCAATGGCCGAGGCTAGAGTGGCTGCTGAGAACGGTGATTTGGTTGGTGCAGTCTCCCTCCTGGAGAGCTGTCGTAGGGCATTGTCTGAAACTGCCTCTGCACGAGCTGGTGACCGCCTGTGCGTCTCACTTTCCGCTGAGTTGAAGGAGATGCAAGAAAGGATGGGAAACCGTCGGGCATACGAGGAATCAGGAAGAGCATACGTTTTATCAGGATTGAGCTCGCACTCATGGCAGAGGGCAACTGCTCGAGGCGATTCCACAGATAGCACTAGCCTTGTGCAATCTTACCAAACACCATCGATGACAGACATGGTGACACGTTCGCAAACCATGTTGTTAGGGAACCCATCACCACGACGAGCCCTCAGCAGTGCTCAGTCATTTCCGGCCAAATCTAGCCGCGATAATCCTCAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

728

Amino Acids

78.61

Weight (kDa)

7.22

Isoelectric Point (pI)

49.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 82 - 127 8.4e-08 Ring finger domain
zf-RING_11 PF17123 83 - 112 4e-08 RING-like zinc finger
zf-C3HC4 PF00097 83 - 126 6e-07 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 83 - 127 4.6e-06 RING-H2 zinc finger domain
VWA_CoxE PF05762 268 - 386 4.1e-09 VWA domain containing CoxE-like protein
VWA PF00092 274 - 453 2.3e-23 von Willebrand factor type A domain
VWA_3 PF13768 274 - 445 4.3e-18 von Willebrand factor type A domain
VWA_2 PF13519 275 - 381 2.9e-19 von Willebrand factor type A domain
WAV3_C PF25243 576 - 645 4.9e-07 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Vwaint PF14624 625 - 698 8e-21 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014999)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60710
fragaria_vesca FvH4_3g31730 FvH4_3g31730
malus_domestica MD03G1121000.v1.1 MD11G1139800.v1.1
pyrus_communis pycom11g11540
rosa_chinensis RchiOBHm_Chr5g0058461
rosa_laevigata RLG00000035222
rosa_multiflora Rmu_sc0000367.1_g000122
rosa_roxburghii Rroxscaffold_1G00022080
rosa_rugosa Rorug05G0314900
rosa_samantha Rh5AG381400 Rh5BG392900 Rh5CG417100 Rh5DG408100
rosa_wichuraiana Rw5G035930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 848
Acc65I GGTACC 1 cut(s) 1073
AccB1I GGYRCC 1 cut(s) 1073
AccI GTMKAC 2 cut(s) 1089, 1728
AccII CGCG 2 cut(s) 432, 2166
AclWI GGATC 4 cut(s) 1168, 1181, 1625, 1675
AcoI YGGCCR 2 cut(s) 1767, 2151
AcsI RAATTY 4 cut(s) 363, 498, 802, 1654
AcuI CTGAAG 2 cut(s) 702, 1713
AcyI GRCGYC 1 cut(s) 123
AdeI CACNNNGTG 1 cut(s) 434
AfaI GTAC 3 cut(s) 862, 903, 1075
AfiI CCNNNNNNNGG 4 cut(s) 210, 224, 742, 978
AflII CTTAAG 1 cut(s) 740
AflIII ACRYGT 3 cut(s) 47, 1596, 2081
AgeI ACCGGT 1 cut(s) 529
AgsI TTSAA 6 cut(s) 43, 698, 1035, 1302, 1458, 1906
AjnI CCWGG 1 cut(s) 1821
AjuI GAANNNNNNNTTGG 2 cut(s) 1784, 1816
Alw21I GWGCWC 4 cut(s) 311, 814, 1985, 2140
Alw26I GTCTC 3 cut(s) 56, 1819, 1891
AlwI GGATC 4 cut(s) 1168, 1181, 1625, 1675
AlwNI CAGNNNCTG 1 cut(s) 797
Ama87I CYCGRG 2 cut(s) 1438, 2010
AoxI GGCC 6 cut(s) 283, 461, 1384, 1688, 1767, 2151
ApeKI GCWGC 9 cut(s) 101, 774, 1232, 1286, 1493, 1496, 1735, 1754, 1784
ApoI RAATTY 4 cut(s) 363, 498, 802, 1654
AsiGI ACCGGT 1 cut(s) 529
Asp700I GAANNNNTTC 1 cut(s) 1507
Asp718I GGTACC 1 cut(s) 1073
AspS9I GGNCC 3 cut(s) 283, 462, 914
AsuHPI GGTGA 6 cut(s) 1427, 1663, 1808, 1883, 2089, 2106
AvaI CYCGRG 2 cut(s) 1438, 2010
AvaII GGWCC 1 cut(s) 914
BaeI ACNNNNGTAYC 4 cut(s) 777, 810, 1065, 1098
BamHI GGATCC 1 cut(s) 1173
BanI GGYRCC 1 cut(s) 1073
BanII GRGCYC 2 cut(s) 1985, 2128
BauI CACGAG 2 cut(s) 807, 1863
BbsI GAAGAC 3 cut(s) 192, 200, 278
Bbv12I GWGCWC 4 cut(s) 311, 814, 1985, 2140
BbvCI CCTCAGC 3 cut(s) 1056, 1344, 2129
BbvI GCAGC 9 cut(s) 88, 786, 1244, 1273, 1480, 1483, 1747, 1766, 1771
BccI CCATC 9 cut(s) 148, 744, 883, 925, 1130, 1185, 1918, 2068, 2119
BceAI ACGGC 1 cut(s) 110
BcgI CGANNNNNNTGC 2 cut(s) 1514, 1548
BciT130I CCWGG 1 cut(s) 1823
BciVI GTATCC 1 cut(s) 1138
BcoDI GTCTC 3 cut(s) 56, 1819, 1891
BfaI CTAG 6 cut(s) 69, 441, 1167, 1776, 2034, 2160
BfmI CTRYAG 2 cut(s) 300, 951
BfrI CTTAAG 1 cut(s) 740
BfuAI ACCTGC 1 cut(s) 848
BfuI GTATCC 1 cut(s) 1138
BglII AGATCT 1 cut(s) 820
BlpI GCTNAGC 1 cut(s) 24
Bme1390I CCNGG 1 cut(s) 1823
Bme18I GGWCC 1 cut(s) 914
BmeT110I CYCGRG 2 cut(s) 1438, 2010
BmgT120I GGNCC 3 cut(s) 283, 462, 914
BmiI GGNNCC 8 cut(s) 78, 166, 229, 464, 747, 1075, 1175, 2108
BmrFI CCNGG 1 cut(s) 1823
BmrI ACTGGG 2 cut(s) 1103, 1366
BmuI ACTGGG 2 cut(s) 1103, 1366
BpiI GAAGAC 3 cut(s) 192, 200, 278
BpmI CTGGAG 2 cut(s) 798, 1844
Bpu10I CCTNAGC 3 cut(s) 1056, 1344, 2129
Bpu1102I GCTNAGC 1 cut(s) 24
Bsa29I ATCGAT 1 cut(s) 2063
BsaHI GRCGYC 1 cut(s) 123
BsaJI CCNNGG 3 cut(s) 910, 1077, 1770
BsaWI WCCGGW 2 cut(s) 203, 529
Bsc4I CCNNNNNNNGG 4 cut(s) 210, 224, 742, 978
Bse118I RCCGGY 2 cut(s) 529, 960
Bse1I ACTGG 7 cut(s) 229, 371, 791, 815, 1109, 1372, 1587
Bse3DI GCAATG 3 cut(s) 1007, 1050, 1770
BseBI CCWGG 1 cut(s) 1823
BseCI ATCGAT 1 cut(s) 2063
BseDI CCNNGG 3 cut(s) 910, 1077, 1770
BseGI GGATG 5 cut(s) 486, 987, 1177, 1366, 1929
BseLI CCNNNNNNNGG 4 cut(s) 210, 224, 742, 978
BseMI GCAATG 3 cut(s) 1007, 1050, 1770
BseMII CTCAG 7 cut(s) 591, 1047, 1335, 1779, 1890, 2143, 2153
BseNI ACTGG 7 cut(s) 229, 371, 791, 815, 1109, 1372, 1587
BseRI GAGGAG 4 cut(s) 89, 127, 738, 937
BseXI GCAGC 9 cut(s) 88, 786, 1244, 1273, 1480, 1483, 1747, 1766, 1771
BseYI CCCAGC 1 cut(s) 992
BsgI GTGCAG 4 cut(s) 1293, 1773, 1830, 1845
Bsh1236I CGCG 2 cut(s) 432, 2166
Bsh1285I CGRYCG 1 cut(s) 530
BshFI GGCC 6 cut(s) 285, 463, 1386, 1690, 1769, 2153
BshNI GGYRCC 1 cut(s) 1073
BshTI ACCGGT 1 cut(s) 529
BshVI ATCGAT 1 cut(s) 2063
BsiEI CGRYCG 1 cut(s) 530
BsiHKAI GWGCWC 4 cut(s) 311, 814, 1985, 2140
BsiHKCI CYCGRG 2 cut(s) 1438, 2010
BsiSI CCGG 4 cut(s) 204, 530, 961, 2150
BslFI GGGAC 2 cut(s) 1057, 1336
BslI CCNNNNNNNGG 4 cut(s) 210, 224, 742, 978
BsmAI GTCTC 3 cut(s) 56, 1819, 1891
BsmBI CGTCTC 1 cut(s) 1891
BsmFI GGGAC 2 cut(s) 1057, 1336
BsmI GAATGC 2 cut(s) 1297, 1431
BsnI GGCC 6 cut(s) 285, 463, 1386, 1690, 1769, 2153
BsoBI CYCGRG 2 cut(s) 1438, 2010
Bsp1286I GDGCHC 5 cut(s) 311, 814, 1985, 2128, 2140
Bsp143I GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
Bsp1720I GCTNAGC 1 cut(s) 24
BspANI GGCC 6 cut(s) 285, 463, 1386, 1690, 1769, 2153
BspCNI CTCAG 7 cut(s) 592, 1048, 1336, 1780, 1891, 2142, 2152
BspDI ATCGAT 1 cut(s) 2063
BspFNI CGCG 2 cut(s) 432, 2166
BspHI TCATGA 2 cut(s) 712, 1279
BspLI GGNNCC 8 cut(s) 78, 166, 229, 464, 747, 1075, 1175, 2108
BspMAI CTGCAG 1 cut(s) 304
BspMI ACCTGC 1 cut(s) 848
BspPI GGATC 4 cut(s) 1168, 1181, 1625, 1675
BspQI GCTCTTC 1 cut(s) 1951
BspT107I GGYRCC 1 cut(s) 1073
BspTI CTTAAG 1 cut(s) 740
BsrDI GCAATG 3 cut(s) 1007, 1050, 1770
BsrFI RCCGGY 2 cut(s) 529, 960
BsrI ACTGG 7 cut(s) 229, 371, 791, 815, 1109, 1372, 1587
BssAI RCCGGY 2 cut(s) 529, 960
BssECI CCNNGG 3 cut(s) 910, 1077, 1770
BssMI GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
BssNI GRCGYC 1 cut(s) 123
BssSI CACGAG 2 cut(s) 807, 1863
BssT1I CCWWGG 2 cut(s) 910, 1077
Bst2BI CACGAG 2 cut(s) 807, 1863
Bst2UI CCWGG 1 cut(s) 1823
Bst6I CTCTTC 2 cut(s) 1533, 1951
BstACI GRCGYC 1 cut(s) 123
BstAFI CTTAAG 1 cut(s) 740
BstEII GGTNACC 1 cut(s) 1871
BstF5I GGATG 5 cut(s) 486, 987, 1177, 1366, 1929
BstFNI CGCG 2 cut(s) 432, 2166
BstKTI GATC 9 cut(s) 424, 592, 704, 823, 925, 1176, 1279, 1633, 1683
BstMAI GTCTC 3 cut(s) 56, 1819, 1891
BstMBI GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
BstMCI CGRYCG 1 cut(s) 530
BstMWI GCNNNNNNNGC 7 cut(s) 29, 171, 1013, 1744, 1760, 1781, 1993
BstNI CCWGG 1 cut(s) 1823
BstNSI RCATGY 2 cut(s) 51, 1600
BstPI GGTNACC 1 cut(s) 1871
BstSCI CCNGG 1 cut(s) 1821
BstSFI CTRYAG 2 cut(s) 300, 951
BstUI CGCG 2 cut(s) 432, 2166
BstV1I GCAGC 9 cut(s) 88, 786, 1244, 1273, 1480, 1483, 1747, 1766, 1771
BstV2I GAAGAC 3 cut(s) 192, 200, 278
BstX2I RGATCY 3 cut(s) 820, 1173, 1630
BstXI CCANNNNNNTGG 1 cut(s) 1379
BstYI RGATCY 3 cut(s) 820, 1173, 1630
Bsu15I ATCGAT 1 cut(s) 2063
BsuI GTATCC 1 cut(s) 1138
BsuRI GGCC 6 cut(s) 285, 463, 1386, 1690, 1769, 2153
BsuTUI ATCGAT 1 cut(s) 2063
BtgZI GCGATG 1 cut(s) 902
BtsCI GGATG 5 cut(s) 486, 987, 1177, 1366, 1929
BtsI GCAGTG 3 cut(s) 297, 1675, 2140
BveI ACCTGC 1 cut(s) 848
CaiI CAGNNNCTG 1 cut(s) 797
CciI TCATGA 2 cut(s) 712, 1279
Cfr10I RCCGGY 2 cut(s) 529, 960
Cfr13I GGNCC 3 cut(s) 283, 462, 914
ClaI ATCGAT 1 cut(s) 2063
CseI GACGC 2 cut(s) 131, 1873
Csp6I GTAC 3 cut(s) 861, 902, 1074
CspAI ACCGGT 1 cut(s) 529
CviQI GTAC 3 cut(s) 861, 902, 1074
DpnI GATC 9 cut(s) 423, 591, 703, 822, 924, 1175, 1278, 1632, 1682
DpnII GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
DraIII CACNNNGTG 1 cut(s) 434
EaeI YGGCCR 2 cut(s) 1767, 2151
Eam1104I CTCTTC 2 cut(s) 1533, 1951
EarI CTCTTC 2 cut(s) 1533, 1951
Ecl136II GAGCTC 1 cut(s) 1983
Eco130I CCWWGG 2 cut(s) 910, 1077
Eco147I AGGCCT 1 cut(s) 1690
Eco24I GRGCYC 2 cut(s) 1985, 2128
Eco47I GGWCC 1 cut(s) 914
Eco53kI GAGCTC 1 cut(s) 1983
Eco57I CTGAAG 2 cut(s) 702, 1713
Eco88I CYCGRG 2 cut(s) 1438, 2010
Eco91I GGTNACC 1 cut(s) 1871
EcoICRI GAGCTC 1 cut(s) 1983
EcoO65I GGTNACC 1 cut(s) 1871
EcoRII CCWGG 1 cut(s) 1821
EcoT14I CCWWGG 2 cut(s) 910, 1077
EcoT22I ATGCAT 5 cut(s) 478, 1009, 1261, 1299, 1366
EcoT38I GRGCYC 2 cut(s) 1985, 2128
ErhI CCWWGG 2 cut(s) 910, 1077
Esp3I CGTCTC 1 cut(s) 1891
FalI AAGNNNNNCTT 2 cut(s) 12, 44
FaqI GGGAC 2 cut(s) 1057, 1336
FauI CCCGC 2 cut(s) 94, 965
FblI GTMKAC 2 cut(s) 1089, 1728
FokI GGATG 5 cut(s) 493, 994, 1164, 1373, 1936
FriOI GRGCYC 2 cut(s) 1985, 2128
FspBI CTAG 6 cut(s) 69, 441, 1167, 1776, 2034, 2160
GsaI CCCAGC 1 cut(s) 996
GsuI CTGGAG 2 cut(s) 798, 1844
HaeIII GGCC 6 cut(s) 285, 463, 1386, 1690, 1769, 2153
HapII CCGG 4 cut(s) 204, 530, 961, 2150
HgaI GACGC 2 cut(s) 131, 1873
Hin1I GRCGYC 1 cut(s) 123
HindIII AAGCTT 3 cut(s) 26, 583, 866
HinfI GANTC 4 cut(s) 1246, 1354, 1949, 2018
HpaII CCGG 4 cut(s) 204, 530, 961, 2150
HphI GGTGA 6 cut(s) 1427, 1663, 1808, 1883, 2089, 2106
Hpy166II GTNNAC 4 cut(s) 1021, 1090, 1624, 1729
Hpy8I GTNNAC 4 cut(s) 1021, 1090, 1624, 1729
Hpy99I CGWCG 6 cut(s) 125, 199, 981, 1224, 1938, 2124
HpyAV CCTTC 4 cut(s) 952, 983, 1658, 1900
HpyCH4IV ACGT 2 cut(s) 1965, 2083
HpyF10VI GCNNNNNNNGC 7 cut(s) 29, 171, 1013, 1744, 1760, 1781, 1993
HpySE526I ACGT 2 cut(s) 1965, 2083
Hsp92I GRCGYC 1 cut(s) 123
KpnI GGTACC 1 cut(s) 1077
KroI GCCGGC 1 cut(s) 960
KroNI GCCGGC 1 cut(s) 962
Kzo9I GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
LguI GCTCTTC 1 cut(s) 1951
LmnI GCTCC 6 cut(s) 76, 170, 314, 421, 751, 817
Lsp1109I GCAGC 9 cut(s) 88, 786, 1244, 1273, 1480, 1483, 1747, 1766, 1771
MaeI CTAG 6 cut(s) 69, 441, 1167, 1776, 2034, 2160
MaeII ACGT 2 cut(s) 1965, 2083
MaeIII GTNAC 6 cut(s) 826, 1472, 1558, 1675, 1871, 2077
MalI GATC 9 cut(s) 423, 591, 703, 822, 924, 1175, 1278, 1632, 1682
MboI GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
MboII GAAGA 9 cut(s) 192, 200, 283, 528, 641, 1114, 1550, 1673, 1968
MflI RGATCY 3 cut(s) 820, 1173, 1630
MhlI GDGCHC 5 cut(s) 311, 814, 1985, 2128, 2140
MluCI AATT 8 cut(s) 363, 444, 498, 646, 802, 936, 1422, 1654
MmeI TCCRAC 4 cut(s) 144, 192, 633, 959
Mph1103I ATGCAT 5 cut(s) 478, 1009, 1261, 1299, 1366
MroNI GCCGGC 1 cut(s) 960
MroXI GAANNNNTTC 1 cut(s) 1507
MseI TTAA 3 cut(s) 447, 741, 1391
MspA1I CMGCKG 3 cut(s) 1235, 1738, 1898
MspCI CTTAAG 1 cut(s) 740
MspI CCGG 4 cut(s) 204, 530, 961, 2150
MspR9I CCNGG 1 cut(s) 1823
Mva1269I GAATGC 2 cut(s) 1297, 1431
MvaI CCWGG 1 cut(s) 1823
MvnI CGCG 2 cut(s) 432, 2166
MwoI GCNNNNNNNGC 7 cut(s) 29, 171, 1013, 1744, 1760, 1781, 1993
NaeI GCCGGC 1 cut(s) 962
NdeII GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
NgoMIV GCCGGC 1 cut(s) 960
NlaIV GGNNCC 8 cut(s) 78, 166, 229, 464, 747, 1075, 1175, 2108
NmeAIII GCCGAG 1 cut(s) 1795
NmuCI GTSAC 5 cut(s) 826, 1558, 1675, 1871, 2077
NsiI ATGCAT 5 cut(s) 478, 1009, 1261, 1299, 1366
NspI RCATGY 2 cut(s) 51, 1600
PaeR7I CTCGAG 1 cut(s) 2010
PagI TCATGA 2 cut(s) 712, 1279
PceI AGGCCT 1 cut(s) 1690
PciI ACATGT 2 cut(s) 47, 1596
PciSI GCTCTTC 1 cut(s) 1951
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PctI GAATGC 2 cut(s) 1297, 1431
PdiI GCCGGC 1 cut(s) 962
PdmI GAANNNNTTC 1 cut(s) 1507
PfeI GAWTC 4 cut(s) 1246, 1354, 1949, 2018
PfoI TCCNGGA 1 cut(s) 1821
PinAI ACCGGT 1 cut(s) 529
PscI ACATGT 2 cut(s) 47, 1596
Psp124BI GAGCTC 1 cut(s) 1985
Psp6I CCWGG 1 cut(s) 1821
PspEI GGTNACC 1 cut(s) 1871
PspFI CCCAGC 1 cut(s) 992
PspGI CCWGG 1 cut(s) 1821
PspN4I GGNNCC 8 cut(s) 78, 166, 229, 464, 747, 1075, 1175, 2108
PspPI GGNCC 3 cut(s) 283, 462, 914
PspXI VCTCGAGB 1 cut(s) 2010
PstI CTGCAG 1 cut(s) 304
PstNI CAGNNNCTG 1 cut(s) 797
PsuI RGATCY 3 cut(s) 820, 1173, 1630
PvuII CAGCTG 1 cut(s) 1235
RsaI GTAC 3 cut(s) 862, 903, 1075
RsaNI GTAC 3 cut(s) 861, 902, 1074
SacI GAGCTC 1 cut(s) 1985
SapI GCTCTTC 1 cut(s) 1951
SaqAI TTAA 3 cut(s) 447, 741, 1391
Sau3AI GATC 9 cut(s) 421, 589, 701, 820, 922, 1173, 1276, 1630, 1680
Sau96I GGNCC 3 cut(s) 283, 462, 914
ScrFI CCNGG 1 cut(s) 1823
SduI GDGCHC 5 cut(s) 311, 814, 1985, 2128, 2140
SfcI CTRYAG 2 cut(s) 300, 951
Sfr274I CTCGAG 1 cut(s) 2010
SinI GGWCC 1 cut(s) 914
SlaI CTCGAG 1 cut(s) 2010
SmlI CTYRAG 2 cut(s) 740, 2010
SmoI CTYRAG 2 cut(s) 740, 2010
Sse9I AATT 8 cut(s) 363, 444, 498, 646, 802, 936, 1422, 1654
SseBI AGGCCT 1 cut(s) 1690
SspI AATATT 1 cut(s) 1570
SspMI CTAG 6 cut(s) 69, 441, 1167, 1776, 2034, 2160
SstI GAGCTC 1 cut(s) 1985
StuI AGGCCT 1 cut(s) 1690
StyD4I CCNGG 1 cut(s) 1821
StyI CCWWGG 2 cut(s) 910, 1077
TaiI ACGT 2 cut(s) 1968, 2086
TaqI TCGA 5 cut(s) 92, 627, 1292, 2011, 2063
TasI AATT 8 cut(s) 363, 444, 498, 646, 802, 936, 1422, 1654
TauI GCSGC 4 cut(s) 82, 107, 1386, 2166
TfiI GAWTC 4 cut(s) 1246, 1354, 1949, 2018
Tru1I TTAA 3 cut(s) 447, 741, 1391
Tru9I TTAA 3 cut(s) 447, 741, 1391
TseFI GTSAC 5 cut(s) 826, 1558, 1675, 1871, 2077
TseI GCWGC 9 cut(s) 101, 774, 1232, 1286, 1493, 1496, 1735, 1754, 1784
Tsp45I GTSAC 5 cut(s) 826, 1558, 1675, 1871, 2077
TspDTI ATGAA 5 cut(s) 284, 594, 893, 1244, 1324
TspGWI ACGGA 1 cut(s) 1208
Vha464I CTTAAG 1 cut(s) 740
VpaK11BI GGWCC 1 cut(s) 914
XapI RAATTY 4 cut(s) 363, 498, 802, 1654
XbaI TCTAGA 1 cut(s) 440
XceI RCATGY 2 cut(s) 51, 1600
XhoI CTCGAG 1 cut(s) 2010
XmiI GTMKAC 2 cut(s) 1089, 1728
XmnI GAANNNNTTC 1 cut(s) 1507
XspI CTAG 6 cut(s) 69, 441, 1167, 1776, 2034, 2160
Zsp2I ATGCAT 5 cut(s) 478, 1009, 1261, 1299, 1366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.