Rmu_sc0000367.1_g000122

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000367.1
OG0014999
Physical Location & Seq
Forward (+)
586632 .. 590298
3667 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000367.1_g000122.1.cds

Sequence Viewer

Length: 2175 bp
atggggagcaaatggaggaaagccaagcttgctcttggcttgaacacttgtctttatgttcctcaaactgcagaggaatcatcatcaccgtctccaaacggcatcgttgagtctagacactccgacgccgtttcttcctcctctctgctttctccgactggtattggctccgaccggcgacccaccacgcccactccgtcctcctcggggctccggttgcccaaaagtggacccaagtcctccaagagaacttgcgcaatatgcttaaataccatgaaacctggacacgggcatgccatttttactgcagagtgctctcactcttttcacttccactgcattacttctaatgtaaaacatgggaaccaaatttgcccagtttgcagggcaaagtggaaagaagtcccctttcagaaccctgcttctgatctttcacagggtattccaagaattaacccagtgaattggcctcgagatgatgcatggatgactgttttacgccaaattcctccaccacgcgttgatgtgagccggcctattacgtcactcttgcacactcctgaaccagttatttttgacgatgatgaaagcttagataaccaaccagacatttctaagaatacgacatctgttgaagaacagagttctaacaacaattgtattggaatcgtagaggtcaaaacatatcccgaagttccagctgttgaaagatcaagctctcatgataacttcagtgttttaattcatctcaaggctcctcttacaagtgcaagacaaaatggcagcagaaacccagtgtctcaaaattctcgggccccagtagaccttattacagtgcttgatgttagtggcagcatggcaggtacaaagcttgctttgctaaaacgagccatggggtttgtggtgcagaaccttggtccttctgatcggctttctgttattgccttctcctctacagcccgccggctctttccccttcgtcgcatgactgacactggaaggcagcaagcattgcaggctgtaaactctcttgtttcaaatggtgggacaaacattgccgaggctcttagaaaaggtaccaaggttttagtagaccgcaagtcaaaaaatcctgtttgcagtatcatactattatctgatgggcaggatacatatactgttactagtccatgtgggatccatcctcgtacagattaccaatcacttctcccaatctctatccgtcgcaataatgcagcaggcttgcatattccagttcacacatttggatttggtgcagaccatgatgctgcctcgatgcattcaatctctgagatttctgggggaacattttctttcatagaagctgaaagtgtgattcaggatgcattcgcacagtgcattgggggccttctgagtgtagtggtgcaagaactgcatgtcagaattgagtgtgttcacccaagtctgcaattgggttcaataaaagctgggagttatagaaccagcatgacggctgatgcaagaatgggatctattgatgctggagacctgtatgctgaagaagagagggattttttggtgacaatgaatattcctgtcgaccagtctagtaatgagatgtcactggtaaaggttagatgtctttacagagacccaattacgaaagaaatggtcaatttgaatgaagctggtgaagtcacaatcgaaaggcccgaagtagccggacaactagtagtgtcaatggaagtagacaggcaacgcaacaggcttcgtgcagcagaagcaatggccgaggccagagtagcagctgagaatgctgatttggctggtgcagtttccctcctggagagctgtcgtcaggcattggctgaaactacttctgcacgagccggtgaccgcttgtgtgttgcacttgcagctgagttaaaggagatgcaagaaagaatgggaaaccgtcgtgcatacgaagaaacaggtagggcttacgttttatcaggattgagttcacactcatggcagagggcaactgctcgaggtgattccacagatagcacaagccttctgcaatcttaccaaaccccatcaatggtagacatggtgacacggtctcagacaatgctactagggaacccatcacctcgacgaaccctcagcagtgttaagtcatttccagccaaatcacagccacgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

724

Amino Acids

78.56

Weight (kDa)

8.43

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014999)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60710
fragaria_vesca FvH4_3g31730 FvH4_3g31730
malus_domestica MD03G1121000.v1.1 MD11G1139800.v1.1
pyrus_communis pycom11g11540
rosa_chinensis RchiOBHm_Chr5g0058461
rosa_laevigata RLG00000035222
rosa_multiflora Rmu_sc0000367.1_g000122
rosa_roxburghii Rroxscaffold_1G00022080
rosa_rugosa Rorug05G0314900
rosa_samantha Rh5AG381400 Rh5BG392900 Rh5CG417100 Rh5DG408100
rosa_wichuraiana Rw5G035930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 256
Acc36I ACCTGC 1 cut(s) 851
Acc65I GGTACC 1 cut(s) 1076
AccB1I GGYRCC 1 cut(s) 1076
AccI GTMKAC 5 cut(s) 822, 1092, 1581, 1731, 2073
AccII CGCG 1 cut(s) 519
AciI CCGC 3 cut(s) 961, 1096, 1879
AclWI GGATC 3 cut(s) 1171, 1184, 1519
AcoI YGGCCR 1 cut(s) 1770
AcsI RAATTY 3 cut(s) 369, 504, 805
AcuI CTGAAG 2 cut(s) 715, 1560
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 3 cut(s) 865, 1078, 1189
AfiI CCNNNNNNNGG 4 cut(s) 207, 227, 287, 2068
AflIII ACRYGT 1 cut(s) 517
AgsI TTSAA 7 cut(s) 43, 635, 707, 1038, 1305, 1461, 1663
AhdI GACNNNNNGTC 1 cut(s) 1099
AhlI ACTAGT 2 cut(s) 1163, 1711
AjnI CCWGG 2 cut(s) 280, 1824
AjuI GAANNNNNNNTTGG 2 cut(s) 1787, 1819
Alw21I GWGCWC 1 cut(s) 317
Alw26I GTCTC 5 cut(s) 96, 804, 1521, 1626, 2094
AlwI GGATC 3 cut(s) 1171, 1184, 1519
Ama87I CYCGRG 4 cut(s) 205, 471, 810, 2013
AoxI GGCC 7 cut(s) 467, 533, 813, 1387, 1691, 1770, 1776
ApaI GGGCCC 1 cut(s) 817
ApeKI GCWGC 8 cut(s) 783, 852, 1003, 1235, 1289, 1757, 1787, 1898
ApoI RAATTY 3 cut(s) 369, 504, 805
Asp700I GAANNNNTTC 1 cut(s) 1330
Asp718I GGTACC 1 cut(s) 1076
AspLEI GCGC 1 cut(s) 257
AspS9I GGNCC 6 cut(s) 230, 813, 814, 917, 1387, 1692
AsuHPI GGTGA 8 cut(s) 78, 1430, 1573, 1685, 1886, 2030, 2092, 2109
AvaI CYCGRG 4 cut(s) 205, 471, 810, 2013
AvaII GGWCC 2 cut(s) 230, 917
BaeGI GKGCMC 1 cut(s) 817
BaeI ACNNNNGTAYC 2 cut(s) 1068, 1101
BamHI GGATCC 1 cut(s) 1176
BanI GGYRCC 1 cut(s) 1076
BanII GRGCYC 2 cut(s) 213, 817
BauI CACGAG 1 cut(s) 1866
Bbv12I GWGCWC 1 cut(s) 317
BbvCI CCTCAGC 1 cut(s) 2132
BbvI GCAGC 8 cut(s) 795, 864, 1015, 1247, 1276, 1769, 1799, 1910
BccI CCATC 4 cut(s) 1133, 1188, 2071, 2122
BceAI ACGGC 3 cut(s) 113, 115, 1509
BciT130I CCWGG 2 cut(s) 282, 1826
BciVI GTATCC 1 cut(s) 1141
BcoDI GTCTC 5 cut(s) 96, 804, 1521, 1626, 2094
BcuI ACTAGT 2 cut(s) 1163, 1711
BfaI CTAG 5 cut(s) 114, 1164, 1590, 1712, 2105
BfmI CTRYAG 3 cut(s) 69, 306, 954
BfuAI ACCTGC 1 cut(s) 851
BfuI GTATCC 1 cut(s) 1141
BisI GCNGC 8 cut(s) 784, 853, 1004, 1236, 1290, 1758, 1788, 1899
BlsI GCNGC 8 cut(s) 785, 854, 1005, 1237, 1291, 1759, 1789, 1900
Bme1390I CCNGG 2 cut(s) 282, 1826
Bme18I GGWCC 2 cut(s) 230, 917
BmeRI GACNNNNNGTC 1 cut(s) 1099
BmeT110I CYCGRG 4 cut(s) 205, 471, 810, 2013
BmgT120I GGNCC 6 cut(s) 230, 813, 814, 917, 1387, 1692
BmrFI CCNGG 2 cut(s) 282, 1826
BmrI ACTGGG 4 cut(s) 371, 452, 788, 812
BmsI GCATC 8 cut(s) 111, 469, 1276, 1287, 1354, 1489, 1510, 1905
BmuI ACTGGG 4 cut(s) 371, 452, 788, 812
BoxI GACNNNNGTC 1 cut(s) 235
BpmI CTGGAG 2 cut(s) 1545, 1847
Bpu10I CCTNAGC 1 cut(s) 2132
BpuEI CTTGAG 1 cut(s) 734
BsaHI GRCGYC 1 cut(s) 126
BsaI GGTCTC 3 cut(s) 1521, 1626, 2094
BsaJI CCNNGG 6 cut(s) 204, 891, 913, 1059, 1080, 1773
BsaWI WCCGGW 1 cut(s) 213
BsaXI ACNNNNNCTCC 2 cut(s) 178, 208
Bsc4I CCNNNNNNNGG 4 cut(s) 207, 227, 287, 2068
Bse118I RCCGGY 4 cut(s) 174, 531, 963, 1871
Bse3DI GCAATG 3 cut(s) 1010, 1053, 1773
BseBI CCWGG 2 cut(s) 282, 1826
BseDI CCNNGG 6 cut(s) 204, 891, 913, 1059, 1080, 1773
BseGI GGATG 3 cut(s) 492, 1180, 1369
BseLI CCNNNNNNNGG 4 cut(s) 207, 227, 287, 2068
BseMI GCAATG 3 cut(s) 1010, 1053, 1773
BseMII CTCAG 6 cut(s) 1302, 1385, 1782, 1893, 2105, 2146
BseRI GAGGAG 4 cut(s) 130, 193, 747, 940
BseSI GKGCMC 1 cut(s) 817
BseXI GCAGC 8 cut(s) 795, 864, 1015, 1247, 1276, 1769, 1799, 1910
BseYI CCCAGC 1 cut(s) 1469
BsgI GTGCAG 5 cut(s) 926, 1296, 1776, 1833, 1848
Bsh1236I CGCG 1 cut(s) 519
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 7 cut(s) 469, 535, 815, 1389, 1693, 1772, 1778
BshNI GGYRCC 1 cut(s) 1076
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 1 cut(s) 317
BsiHKCI CYCGRG 4 cut(s) 205, 471, 810, 2013
BsiSI CCGG 6 cut(s) 175, 214, 532, 964, 1704, 1872
BslFI GGGAC 2 cut(s) 389, 1060
BslI CCNNNNNNNGG 4 cut(s) 207, 227, 287, 2068
BsmAI GTCTC 5 cut(s) 96, 804, 1521, 1626, 2094
BsmBI CGTCTC 1 cut(s) 96
BsmFI GGGAC 2 cut(s) 389, 1060
BsmI GAATGC 3 cut(s) 1300, 1367, 1801
BsnI GGCC 7 cut(s) 469, 535, 815, 1389, 1693, 1772, 1778
Bso31I GGTCTC 3 cut(s) 1521, 1626, 2094
BsoBI CYCGRG 4 cut(s) 205, 471, 810, 2013
Bsp120I GGGCCC 1 cut(s) 813
Bsp1286I GDGCHC 3 cut(s) 213, 317, 817
Bsp143I GATC 5 cut(s) 427, 710, 925, 1176, 1511
Bsp19I CCATGG 1 cut(s) 891
BspACI CCGC 3 cut(s) 961, 1096, 1879
BspANI GGCC 7 cut(s) 469, 535, 815, 1389, 1693, 1772, 1778
BspCNI CTCAG 6 cut(s) 1303, 1386, 1783, 1894, 2104, 2145
BspFNI CGCG 1 cut(s) 519
BspHI TCATGA 1 cut(s) 721
BspMAI CTGCAG 2 cut(s) 73, 310
BspMI ACCTGC 1 cut(s) 851
BspPI GGATC 3 cut(s) 1171, 1184, 1519
BspT107I GGYRCC 1 cut(s) 1076
BspTNI GGTCTC 3 cut(s) 1521, 1626, 2094
BsrDI GCAATG 3 cut(s) 1010, 1053, 1773
BsrFI RCCGGY 4 cut(s) 174, 531, 963, 1871
BssAI RCCGGY 4 cut(s) 174, 531, 963, 1871
BssECI CCNNGG 6 cut(s) 204, 891, 913, 1059, 1080, 1773
BssMI GATC 5 cut(s) 427, 710, 925, 1176, 1511
BssNI GRCGYC 1 cut(s) 126
BssSI CACGAG 1 cut(s) 1866
BssT1I CCWWGG 3 cut(s) 891, 913, 1080
Bst2BI CACGAG 1 cut(s) 1866
Bst2UI CCWGG 2 cut(s) 282, 1826
Bst4CI ACNGT 7 cut(s) 90, 493, 835, 1159, 1377, 1937, 2088
Bst6I CTCTTC 1 cut(s) 1539
BstACI GRCGYC 1 cut(s) 126
BstAPI GCANNNNNTGC 2 cut(s) 1012, 1414
BstDEI CTNAG 9 cut(s) 592, 615, 1067, 1311, 1394, 1791, 1902, 2091, 2132
BstDSI CCRYGG 1 cut(s) 891
BstEII GGTNACC 1 cut(s) 1874
BstF5I GGATG 3 cut(s) 492, 1180, 1369
BstFNI CGCG 1 cut(s) 519
BstHHI GCGC 1 cut(s) 257
BstKTI GATC 5 cut(s) 430, 713, 928, 1179, 1514
BstMAI GTCTC 5 cut(s) 96, 804, 1521, 1626, 2094
BstMBI GATC 5 cut(s) 427, 710, 925, 1176, 1511
BstMCI CGRYCG 1 cut(s) 175
BstNI CCWGG 2 cut(s) 282, 1826
BstNSI RCATGY 2 cut(s) 296, 1421
BstPAI GACNNNNGTC 1 cut(s) 235
BstPI GGTNACC 1 cut(s) 1874
BstSCI CCNGG 2 cut(s) 280, 1824
BstSFI CTRYAG 3 cut(s) 69, 306, 954
BstSLI GKGCMC 1 cut(s) 817
BstUI CGCG 1 cut(s) 519
BstV1I GCAGC 8 cut(s) 795, 864, 1015, 1247, 1276, 1769, 1799, 1910
BstX2I RGATCY 2 cut(s) 1176, 1511
BstXI CCANNNNNNTGG 1 cut(s) 465
BstYI RGATCY 2 cut(s) 1176, 1511
BsuI GTATCC 1 cut(s) 1141
BsuRI GGCC 7 cut(s) 469, 535, 815, 1389, 1693, 1772, 1778
BtgI CCRYGG 1 cut(s) 891
BtsCI GGATG 3 cut(s) 492, 1180, 1369
BtsI GCAGTG 2 cut(s) 334, 2143
BtsIMutI CAGTG 9 cut(s) 334, 465, 739, 801, 840, 993, 1382, 1604, 2143
BveI ACCTGC 1 cut(s) 851
CciI TCATGA 1 cut(s) 721
CfoI GCGC 1 cut(s) 257
Cfr10I RCCGGY 4 cut(s) 174, 531, 963, 1871
Cfr13I GGNCC 6 cut(s) 230, 813, 814, 917, 1387, 1692
CseI GACGC 1 cut(s) 134
Csp6I GTAC 3 cut(s) 864, 1077, 1188
CviQI GTAC 3 cut(s) 864, 1077, 1188
DdeI CTNAG 9 cut(s) 592, 615, 1067, 1311, 1394, 1791, 1902, 2091, 2132
DpnI GATC 5 cut(s) 429, 712, 927, 1178, 1513
DpnII GATC 5 cut(s) 427, 710, 925, 1176, 1511
DriI GACNNNNNGTC 1 cut(s) 1099
EaeI YGGCCR 1 cut(s) 1770
Eam1104I CTCTTC 1 cut(s) 1539
Eam1105I GACNNNNNGTC 1 cut(s) 1099
EarI CTCTTC 1 cut(s) 1539
Eco130I CCWWGG 3 cut(s) 891, 913, 1080
Eco24I GRGCYC 2 cut(s) 213, 817
Eco31I GGTCTC 3 cut(s) 1521, 1626, 2094
Eco47I GGWCC 2 cut(s) 230, 917
Eco57I CTGAAG 2 cut(s) 715, 1560
Eco88I CYCGRG 4 cut(s) 205, 471, 810, 2013
Eco91I GGTNACC 1 cut(s) 1874
EcoO109I RGGNCCY 2 cut(s) 814, 1387
EcoO65I GGTNACC 1 cut(s) 1874
EcoRII CCWGG 2 cut(s) 280, 1824
EcoT14I CCWWGG 3 cut(s) 891, 913, 1080
EcoT22I ATGCAT 3 cut(s) 484, 1302, 1369
EcoT38I GRGCYC 2 cut(s) 213, 817
ErhI CCWWGG 3 cut(s) 891, 913, 1080
Esp3I CGTCTC 1 cut(s) 96
FalI AAGNNNNNCTT 2 cut(s) 12, 44
FaqI GGGAC 2 cut(s) 389, 1060
FauI CCCGC 1 cut(s) 968
FblI GTMKAC 5 cut(s) 822, 1092, 1581, 1731, 2073
Fnu4HI GCNGC 8 cut(s) 784, 853, 1004, 1236, 1290, 1758, 1788, 1899
FokI GGATG 3 cut(s) 499, 1167, 1376
FriOI GRGCYC 2 cut(s) 213, 817
Fsp4HI GCNGC 8 cut(s) 784, 853, 1004, 1236, 1290, 1758, 1788, 1899
FspBI CTAG 5 cut(s) 114, 1164, 1590, 1712, 2105
FspI TGCGCA 1 cut(s) 256
GlaI GCGC 1 cut(s) 256
GluI GCNGC 8 cut(s) 784, 853, 1004, 1236, 1290, 1758, 1788, 1899
GsaI CCCAGC 1 cut(s) 1473
GsuI CTGGAG 2 cut(s) 1545, 1847
HaeIII GGCC 7 cut(s) 469, 535, 815, 1389, 1693, 1772, 1778
HapII CCGG 6 cut(s) 175, 214, 532, 964, 1704, 1872
HgaI GACGC 1 cut(s) 134
HhaI GCGC 1 cut(s) 257
Hin1I GRCGYC 1 cut(s) 126
Hin6I GCGC 1 cut(s) 255
HinP1I GCGC 1 cut(s) 255
HincII GTYRAC 1 cut(s) 1582
HindII GTYRAC 1 cut(s) 1582
HindIII AAGCTT 3 cut(s) 26, 589, 869
HinfI GANTC 5 cut(s) 77, 110, 666, 1357, 2021
HpaII CCGG 6 cut(s) 175, 214, 532, 964, 1704, 1872
HphI GGTGA 8 cut(s) 78, 1430, 1573, 1685, 1886, 2030, 2092, 2109
Hpy188III TCNNGA 7 cut(s) 114, 473, 560, 689, 722, 1361, 1977
Hpy99I CGWCG 5 cut(s) 128, 984, 1227, 1941, 2127
HpyAV CCTTC 6 cut(s) 930, 955, 986, 993, 1400, 2051
HpyCH4III ACNGT 7 cut(s) 90, 493, 835, 1159, 1377, 1937, 2088
HpyCH4IV ACGT 3 cut(s) 542, 1968, 2170
HpyF3I CTNAG 9 cut(s) 592, 615, 1067, 1311, 1394, 1791, 1902, 2091, 2132
HpySE526I ACGT 3 cut(s) 542, 1968, 2170
Hsp92I GRCGYC 1 cut(s) 126
HspAI GCGC 1 cut(s) 255
KpnI GGTACC 1 cut(s) 1080
KroI GCCGGC 2 cut(s) 531, 963
KroNI GCCGGC 2 cut(s) 533, 965
Kzo9I GATC 5 cut(s) 427, 710, 925, 1176, 1511
LmnI GCTCC 4 cut(s) 6, 173, 216, 760
Lsp1109I GCAGC 8 cut(s) 795, 864, 1015, 1247, 1276, 1769, 1799, 1910
LweI GCATC 8 cut(s) 111, 469, 1276, 1287, 1354, 1489, 1510, 1905
MaeI CTAG 5 cut(s) 114, 1164, 1590, 1712, 2105
MaeII ACGT 3 cut(s) 542, 1968, 2170
MaeIII GTNAC 7 cut(s) 543, 1159, 1561, 1602, 1678, 1874, 2080
MalI GATC 5 cut(s) 429, 712, 927, 1178, 1513
MboI GATC 5 cut(s) 427, 710, 925, 1176, 1511
MboII GAAGA 5 cut(s) 126, 647, 1553, 1556, 1961
MfeI CAATTG 2 cut(s) 655, 1451
MflI RGATCY 2 cut(s) 1176, 1511
MhlI GDGCHC 3 cut(s) 213, 317, 817
MluI ACGCGT 1 cut(s) 517
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 3 cut(s) 147, 179, 195
Mph1103I ATGCAT 3 cut(s) 484, 1302, 1369
MroNI GCCGGC 2 cut(s) 531, 963
MroXI GAANNNNTTC 1 cut(s) 1330
MseI TTAA 6 cut(s) 266, 453, 740, 1907, 2142, 2173
MslI CAYNNNNRTG 2 cut(s) 291, 1993
MspA1I CMGCKG 3 cut(s) 701, 1790, 1901
MspI CCGG 6 cut(s) 175, 214, 532, 964, 1704, 1872
MspR9I CCNGG 2 cut(s) 282, 1826
MunI CAATTG 2 cut(s) 655, 1451
Mva1269I GAATGC 3 cut(s) 1300, 1367, 1801
MvaI CCWGG 2 cut(s) 282, 1826
MvnI CGCG 1 cut(s) 519
NaeI GCCGGC 2 cut(s) 533, 965
NcoI CCATGG 1 cut(s) 891
NdeII GATC 5 cut(s) 427, 710, 925, 1176, 1511
NgoMIV GCCGGC 2 cut(s) 531, 963
NmeAIII GCCGAG 2 cut(s) 1084, 1798
NmuCI GTSAC 6 cut(s) 543, 1561, 1602, 1678, 1874, 2080
NsbI TGCGCA 1 cut(s) 256
NsiI ATGCAT 3 cut(s) 484, 1302, 1369
NspI RCATGY 2 cut(s) 296, 1421
PaeI GCATGC 1 cut(s) 296
PaeR7I CTCGAG 2 cut(s) 471, 2013
PagI TCATGA 1 cut(s) 721
PcsI WCGNNNNNNNCGW 2 cut(s) 194, 1692
PctI GAATGC 3 cut(s) 1300, 1367, 1801
PdiI GCCGGC 2 cut(s) 533, 965
PdmI GAANNNNTTC 1 cut(s) 1330
PfeI GAWTC 4 cut(s) 77, 666, 1357, 2021
PflFI GACNNNGTC 1 cut(s) 2086
PfoI TCCNGGA 1 cut(s) 1824
PkrI GCNGC 8 cut(s) 785, 854, 1005, 1237, 1291, 1759, 1789, 1900
PleI GAGTC 1 cut(s) 118
PpsI GAGTC 1 cut(s) 118
PshAI GACNNNNGTC 1 cut(s) 235
Psp6I CCWGG 2 cut(s) 280, 1824
PspEI GGTNACC 1 cut(s) 1874
PspFI CCCAGC 1 cut(s) 1469
PspGI CCWGG 2 cut(s) 280, 1824
PspOMI GGGCCC 1 cut(s) 813
PspPI GGNCC 6 cut(s) 230, 813, 814, 917, 1387, 1692
PspXI VCTCGAGB 1 cut(s) 2013
PstI CTGCAG 2 cut(s) 73, 310
PsuI RGATCY 2 cut(s) 1176, 1511
PsyI GACNNNGTC 1 cut(s) 2086
PvuII CAGCTG 3 cut(s) 701, 1790, 1901
RsaI GTAC 3 cut(s) 865, 1078, 1189
RsaNI GTAC 3 cut(s) 864, 1077, 1188
RseI CAYNNNNRTG 2 cut(s) 291, 1993
SalI GTCGAC 1 cut(s) 1580
SaqAI TTAA 6 cut(s) 266, 453, 740, 1907, 2142, 2173
SatI GCNGC 8 cut(s) 784, 853, 1004, 1236, 1290, 1758, 1788, 1899
Sau3AI GATC 5 cut(s) 427, 710, 925, 1176, 1511
Sau96I GGNCC 6 cut(s) 230, 813, 814, 917, 1387, 1692
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 2 cut(s) 282, 1826
SduI GDGCHC 3 cut(s) 213, 317, 817
SfaNI GCATC 8 cut(s) 111, 469, 1276, 1287, 1354, 1489, 1510, 1905
SfcI CTRYAG 3 cut(s) 69, 306, 954
Sfr274I CTCGAG 2 cut(s) 471, 2013
SinI GGWCC 2 cut(s) 230, 917
SlaI CTCGAG 2 cut(s) 471, 2013
SmiMI CAYNNNNRTG 2 cut(s) 291, 1993
SmlI CTYRAG 3 cut(s) 471, 749, 2013
SmoI CTYRAG 3 cut(s) 471, 749, 2013
SpeI ACTAGT 2 cut(s) 1163, 1711
SphI GCATGC 1 cut(s) 296
SsiI CCGC 3 cut(s) 961, 1096, 1879
SspI AATATT 1 cut(s) 1573
SspMI CTAG 5 cut(s) 114, 1164, 1590, 1712, 2105
StyD4I CCNGG 2 cut(s) 280, 1824
StyI CCWWGG 3 cut(s) 891, 913, 1080
TaaI ACNGT 7 cut(s) 90, 493, 835, 1159, 1377, 1937, 2088
TaiI ACGT 3 cut(s) 545, 1971, 2173
TaqI TCGA 6 cut(s) 472, 1295, 1581, 1686, 2014, 2122
TfiI GAWTC 4 cut(s) 77, 666, 1357, 2021
Tru1I TTAA 6 cut(s) 266, 453, 740, 1907, 2142, 2173
Tru9I TTAA 6 cut(s) 266, 453, 740, 1907, 2142, 2173
TscAI CASTG 9 cut(s) 341, 465, 739, 801, 840, 1000, 1382, 1611, 2143
TseFI GTSAC 6 cut(s) 543, 1561, 1602, 1678, 1874, 2080
TseI GCWGC 8 cut(s) 783, 852, 1003, 1235, 1289, 1757, 1787, 1898
Tsp45I GTSAC 6 cut(s) 543, 1561, 1602, 1678, 1874, 2080
TspDTI ATGAA 6 cut(s) 290, 600, 734, 1327, 1583, 1680
TspGWI ACGGA 2 cut(s) 186, 1211
TspRI CASTG 9 cut(s) 341, 465, 739, 801, 840, 1000, 1382, 1611, 2143
Tth111I GACNNNGTC 1 cut(s) 2086
VpaK11BI GGWCC 2 cut(s) 230, 917
XapI RAATTY 3 cut(s) 369, 504, 805
XbaI TCTAGA 1 cut(s) 113
XceI RCATGY 2 cut(s) 296, 1421
XcmI CCANNNNNNNNNTGG 1 cut(s) 898
XhoI CTCGAG 2 cut(s) 471, 2013
XmiI GTMKAC 5 cut(s) 822, 1092, 1581, 1731, 2073
XmnI GAANNNNTTC 1 cut(s) 1330
XspI CTAG 5 cut(s) 114, 1164, 1590, 1712, 2105
Zsp2I ATGCAT 3 cut(s) 484, 1302, 1369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.