Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0003591

Physical Location & Seq

Genomic Coordinates Reverse (-)

27446600 .. 27455198

Gene Structure 8599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1193200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGTTTACCCGAAGGGACAATTCTCTCTCCGGTTCTCTCCCGAAGTCATCCATTTTTCTCTCCCTCTCCAGAGGAGGCTATAGCTCGCTCTTCCGTGGAGCGCGGTGGCCATTGCATGTCACGCCATTCGGCTTCTCCAGCGAGACGACGACGACGACGATGCCCACCGCAGCCTCACCCTCAGTCTCCGCCTCTTCAACAAGTGGGGCCCACTCGGACCTCCTGACCCGGCTGACCTCACCCGACTCCGACGTCCAGCTCAAGTCTCTCAGAGAGCTCAAGAACCGCATCATCGGCAACCGCACCAAGAAGCTCTCCTTCATCAAGCTCGGCCTGGTCCCACCAGTCGCCGCCATCCTCGCCGCTAGAGCCCAAGCCCAGCCCCAGGCTCATCACGACAACAATCTCCTTGTTCAGTCGGCCGCCGCCCTCGGAAGCTTCGCTTGCGGTTTCGATGCCGGCGTCTTGGCCATTCTCGACGCCGGCGTGTTTCCTAACCTCCTCTTGCTTCTATCGCATCCTGATGCTAAGGTTGTCGATGCCGGTGCACGTTCCTTAAGAATGATTTATCAGTCAAAACTGGCTCCGAAGTGTGATTTCCTTCAAGAGAAAAACATGGAGTTTCTTCTTTCGTTATTGAATAGTGAGAATGAAAATGTTACTGGACTTGGTGCAAGTATAATCATACATTCTTGTGAGAATACTGCTGAACAGAAGGCACTGTGTCATGATGGTGTTGTTAGGAAGCTAATTAGCCTTCTTGAAGGTTCTCTAATTCAGAGAGATAATAGTTTAGAGTCTCTAGCCACAATTATGAAAAACAATGTTGAAGCTGTTTTAGAGTTTGTGGGATCTGAAAATGGAAGAGCTTTGAGTTCTGTAATTGAATTGACAAAGGATAGGTATACCCGTACCAAATTATTGGCCTCTATGTGCTTGATTGTTATAAGGAACTCCTCTTCTTGCTATTTGCAAGATATAGGCATCAAAACCAAGTTGGTGCATCTCTTGCTTGAACTTCATGATGATCCTGGTCAAGTTGGAGATGAAGCTCCCTCAGCTTTTTCTGGTTTAATTTCAGAAAAGCTGGATCTACAGAAACTAGCATTTGAGGCAAATGCTATTGATAAACTTTACAACCACTTGCAAAAGAGTCCGTTGCATCACAAACGCTTGGAAGGAATATTGCTGGCACTGGCTGATCTATGCTCAAAGTTGGAGAGCTGCAGGTCTAGATTTCTGTCATTGCAGGCGTTGAAATTGGTATCTGATGCCCTAACTCATGATAGTTCTGAAGTACGTACGGCAGCTTGCATTTGTTTAAGATGTGTCTCTCGGTCAATCAAGAATTTGTGTGCAGGTAATTTTATGAATGAAATGATTGTCCCTCCCTTGGTTCGGCTATTGGATGACCCTTCTACGTCTGTCCAGGTTGCAGCTCTCAGCGCGATTGGCAACATAGTTGTTGATTTTACCATGCGTAGGTCATTATTTGTACAGTGTGGAGGCATGAAACAGCTTGTTCAGTTATCAAGATCCATGGATTCAACTGTGAGGTTAAATGCTTTATGGGCATTAAGGAACTTGATGTTCCTTGCTGACAATGCCTGTAAACAAGAGATCTTCATGGAGTTTACAGCTTCTTCATTAGCAACTGTCATCTGTGACCCCGAACCTTTTGTCCAAGAGCAGGCTCTTGCACTTATTCGGAATCTTGTTGATGGATGTGTGAAGTCCATTGACCTCGCCTTTGCTGAAAATGGCATGATATTAGATGCCGTTGGGAGGCAGTTGCAGAACGTTTCAAAAGATGAAATTTGGATACAGGGAATGTATGTGCTTAGCAATGTTGCAAGTGGGAATGAATTTCACAAGGAAGCAGTTATGCATCAACTCATTCCACAAGCAGATAATGGGACACAATCTTTTATTCTCAAGTTTTTGCAGAGTAATGAAAACCAATTACGTACAGCTTCTGTCTGGGCCATTGTGAATCTTACTTTTCCACTAAGTCCTGGTGCTTTGAGCCGGCTTGTAAAACTACACGATGCTGGCGTAGTTTCTCAAGTAAAAAGCATGGTCAATGATCCTTGCCTAGATGTGAAGCTTCGAGTAAGAACAGCGGTTGGGCAATTTACAACCTTTGGTGATTGCTCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm DUF4220

Protein Analysis

721

Amino Acids

78.4

Weight (kDa)

7.82

Isoelectric Point (pI)

42.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	367 - 516	5.8e-06	ARMC5
Arm	PF00514	461 - 488	2.5e-06	Armadillo/beta-catenin-like repeat
Arm	PF00514	498 - 530	2.5e-08	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003591)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51350
fragaria_vesca	FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860
malus_domestica	MD03G1175100.v1.1 MD11G1193200.v1.1
prunus_persica	Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1
pyrus_communis	pycom03g13260
rosa_chinensis	RchiOBHm_Chr5g0052041
rosa_laevigata	RLG00000034847
rosa_multiflora	Rmu_sc0012304.1_g000003 Rmu_sc0012304.1_g000004
rosa_roxburghii	Rroxscaffold_1G00027840
rosa_rugosa	Rorug05G0275300 Rorug05G0275400 Rorug05G0275500
rosa_samantha	Rh5AG347300 Rh5BG358200 Rh5CG383700 Rh5DG373500
rosa_wichuraiana	Rw5G032820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	947
AasI	GACNNNNNNGTC	1 cut(s)	251
AatII	GACGTC	1 cut(s)	255
Acc36I	ACCTGC	2 cut(s)	1218, 1349
AccI	GTMKAC	1 cut(s)	905
AccII	CGCG	2 cut(s)	103, 1448
AclI	AACGTT	1 cut(s)	1800
AclWI	GGATC	5 cut(s)	859, 1022, 1098, 1530, 2081
AcoI	YGGCCR	3 cut(s)	107, 420, 468
AcsI	RAATTY	3 cut(s)	1348, 1815, 1865
AcuI	CTGAAG	1 cut(s)	1314
AcyI	GRCGYC	3 cut(s)	252, 462, 480
AfaI	GTAC	5 cut(s)	913, 1299, 1303, 1497, 1969
AfiI	CCNNNNNNNGG	6 cut(s)	385, 1393, 1398, 1482, 1690, 1785
AflII	CTTAAG	1 cut(s)	556
AjnI	CCWGG	5 cut(s)	333, 384, 1030, 1428, 2014
AloI	GAACNNNNNNTCC	2 cut(s)	1665, 1697
Alw21I	GWGCWC	2 cut(s)	279, 550
Alw26I	GTCTC	5 cut(s)	137, 190, 270, 804, 1336
Alw44I	GTGCAC	1 cut(s)	546
AlwI	GGATC	5 cut(s)	859, 1022, 1098, 1530, 2081
AlwNI	CAGNNNCTG	1 cut(s)	1976
AoxI	GGCC	7 cut(s)	107, 207, 331, 420, 468, 924, 1983
ApaI	GGGCCC	1 cut(s)	211
ApaLI	GTGCAC	1 cut(s)	546
ApeKI	GCWGC	4 cut(s)	170, 1224, 1307, 1436
ApoI	RAATTY	3 cut(s)	1348, 1815, 1865
ArsI	GACNNNNNNTTYG	4 cut(s)	1665, 1697, 1733, 1765
AspLEI	GCGC	2 cut(s)	103, 1448
AspS9I	GGNCC	5 cut(s)	207, 208, 217, 337, 1983
AsuC2I	CCSGG	1 cut(s)	229
AsuHPI	GGTGA	3 cut(s)	168, 231, 2159
AvaII	GGWCC	2 cut(s)	217, 337
BaeGI	GKGCMC	2 cut(s)	211, 550
BalI	TGGCCA	2 cut(s)	109, 470
BanII	GRGCYC	3 cut(s)	211, 279, 373
Bbv12I	GWGCWC	2 cut(s)	279, 550
BbvCI	CCTCAGC	1 cut(s)	1057
BbvI	GCAGC	4 cut(s)	182, 1211, 1319, 1448
BccI	CCATC	3 cut(s)	362, 725, 1715
BceAI	ACGGC	2 cut(s)	1320, 1763
BcgI	CGANNNNNNTGC	4 cut(s)	142, 176, 527, 561
BciT130I	CCWGG	5 cut(s)	335, 386, 1032, 1430, 2016
BciVI	GTATCC	1 cut(s)	1815
BcnI	CCSGG	1 cut(s)	229
BcoDI	GTCTC	5 cut(s)	137, 190, 270, 804, 1336
BfaI	CTAG	5 cut(s)	366, 803, 1103, 1233, 2096
BfmI	CTRYAG	3 cut(s)	79, 1094, 1225
BfrI	CTTAAG	1 cut(s)	556
BfuAI	ACCTGC	2 cut(s)	1218, 1349
BfuI	GTATCC	1 cut(s)	1815
BglII	AGATCT	1 cut(s)	1620
BisI	GCNGC	8 cut(s)	171, 351, 363, 423, 426, 1225, 1308, 1437
BlpI	GCTNAGC	1 cut(s)	1841
BlsI	GCNGC	8 cut(s)	172, 352, 364, 424, 427, 1226, 1309, 1438
Bme1390I	CCNGG	6 cut(s)	229, 335, 386, 1032, 1430, 2016
Bme18I	GGWCC	2 cut(s)	217, 337
BmgT120I	GGNCC	5 cut(s)	207, 208, 217, 337, 1983
BmiI	GGNNCC	4 cut(s)	208, 209, 339, 585
BmrFI	CCNGG	6 cut(s)	229, 335, 386, 1032, 1430, 2016
BpmI	CTGGAG	2 cut(s)	52, 121
Bpu10I	CCTNAGC	2 cut(s)	528, 1057
Bpu1102I	GCTNAGC	1 cut(s)	1841
BpuEI	CTTGAG	4 cut(s)	245, 263, 1919, 2049
BpuMI	CCSGG	1 cut(s)	229
BsaAI	YACGTR	2 cut(s)	1301, 1967
BsaHI	GRCGYC	3 cut(s)	252, 462, 480
BsaJI	CCNNGG	5 cut(s)	94, 384, 430, 1392, 1539
BsaWI	WCCGGW	1 cut(s)	29
Bsc4I	CCNNNNNNNGG	6 cut(s)	385, 1393, 1398, 1482, 1690, 1785
Bse118I	RCCGGY	4 cut(s)	458, 482, 542, 2028
Bse1I	ACTGG	4 cut(s)	344, 585, 667, 1200
Bse3DI	GCAATG	3 cut(s)	110, 1244, 1852
BseBI	CCWGG	5 cut(s)	335, 386, 1032, 1430, 2016
BseDI	CCNNGG	5 cut(s)	94, 384, 430, 1392, 1539
BseGI	GGATG	5 cut(s)	47, 354, 517, 1414, 1730
BseLI	CCNNNNNNNGG	6 cut(s)	385, 1393, 1398, 1482, 1690, 1785
BseMI	GCAATG	3 cut(s)	110, 1244, 1852
BseMII	CTCAG	4 cut(s)	195, 283, 1071, 1456
BseNI	ACTGG	4 cut(s)	344, 585, 667, 1200
BseRI	GAGGAG	3 cut(s)	87, 491, 946
BseSI	GKGCMC	2 cut(s)	211, 550
BseX3I	CGGCCG	1 cut(s)	420
BseXI	GCAGC	4 cut(s)	182, 1211, 1319, 1448
BseYI	CCCAGC	1 cut(s)	378
BsgI	GTGCAG	1 cut(s)	1377
Bsh1236I	CGCG	2 cut(s)	103, 1448
Bsh1285I	CGRYCG	1 cut(s)	423
BshFI	GGCC	7 cut(s)	109, 209, 333, 422, 470, 926, 1985
BsiEI	CGRYCG	1 cut(s)	423
BsiHKAI	GWGCWC	2 cut(s)	279, 550
BsiSI	CCGG	6 cut(s)	30, 229, 459, 483, 543, 2029
BsiWI	CGTACG	1 cut(s)	1301
BslFI	GGGAC	4 cut(s)	29, 323, 1370, 1930
BslI	CCNNNNNNNGG	6 cut(s)	385, 1393, 1398, 1482, 1690, 1785
BsmAI	GTCTC	5 cut(s)	137, 190, 270, 804, 1336
BsmBI	CGTCTC	1 cut(s)	137
BsmFI	GGGAC	4 cut(s)	29, 323, 1370, 1930
BsnI	GGCC	7 cut(s)	109, 209, 333, 422, 470, 926, 1985
Bsp120I	GGGCCC	1 cut(s)	207
Bsp1286I	GDGCHC	4 cut(s)	211, 279, 373, 550
Bsp1407I	TGTACA	1 cut(s)	1495
Bsp143I	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
Bsp1720I	GCTNAGC	1 cut(s)	1841
Bsp19I	CCATGG	1 cut(s)	1539
BspANI	GGCC	7 cut(s)	109, 209, 333, 422, 470, 926, 1985
BspCNI	CTCAG	4 cut(s)	194, 282, 1070, 1455
BspFNI	CGCG	2 cut(s)	103, 1448
BspHI	TCATGA	3 cut(s)	727, 1021, 1282
BspLI	GGNNCC	4 cut(s)	208, 209, 339, 585
BspMAI	CTGCAG	1 cut(s)	1229
BspMI	ACCTGC	2 cut(s)	1218, 1349
BspPI	GGATC	5 cut(s)	859, 1022, 1098, 1530, 2081
BspQI	GCTCTTC	2 cut(s)	95, 859
BspTI	CTTAAG	1 cut(s)	556
BsrDI	GCAATG	3 cut(s)	110, 1244, 1852
BsrFI	RCCGGY	4 cut(s)	458, 482, 542, 2028
BsrGI	TGTACA	1 cut(s)	1495
BsrI	ACTGG	4 cut(s)	344, 585, 667, 1200
BssAI	RCCGGY	4 cut(s)	458, 482, 542, 2028
BssECI	CCNNGG	5 cut(s)	94, 384, 430, 1392, 1539
BssMI	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
BssNAI	GTATAC	1 cut(s)	906
BssNI	GRCGYC	3 cut(s)	252, 462, 480
BssT1I	CCWWGG	2 cut(s)	1392, 1539
Bst1107I	GTATAC	1 cut(s)	906
Bst2UI	CCWGG	5 cut(s)	335, 386, 1032, 1430, 2016
Bst4CI	ACNGT	4 cut(s)	723, 1500, 1552, 1657
Bst6I	CTCTTC	4 cut(s)	95, 199, 859, 964
BstACI	GRCGYC	3 cut(s)	252, 462, 480
BstAFI	CTTAAG	1 cut(s)	556
BstAPI	GCANNNNNTGC	1 cut(s)	1009
BstAUI	TGTACA	1 cut(s)	1495
BstBAI	YACGTR	2 cut(s)	1301, 1967
BstDEI	CTNAG	7 cut(s)	181, 269, 528, 1057, 1442, 1841, 2009
BstDSI	CCRYGG	2 cut(s)	94, 1539
BstF5I	GGATG	5 cut(s)	47, 354, 517, 1414, 1730
BstFNI	CGCG	2 cut(s)	103, 1448
BstHHI	GCGC	2 cut(s)	103, 1448
BstKTI	GATC	7 cut(s)	854, 1030, 1093, 1204, 1538, 1623, 2089
BstMAI	GTCTC	5 cut(s)	137, 190, 270, 804, 1336
BstMBI	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
BstMCI	CGRYCG	1 cut(s)	423
BstNI	CCWGG	5 cut(s)	335, 386, 1032, 1430, 2016
BstNSI	RCATGY	1 cut(s)	119
BstSCI	CCNGG	6 cut(s)	227, 333, 384, 1030, 1428, 2014
BstSFI	CTRYAG	3 cut(s)	79, 1094, 1225
BstSLI	GKGCMC	2 cut(s)	211, 550
BstSNI	TACGTA	2 cut(s)	1301, 1967
BstUI	CGCG	2 cut(s)	103, 1448
BstV1I	GCAGC	4 cut(s)	182, 1211, 1319, 1448
BstX2I	RGATCY	4 cut(s)	851, 1090, 1535, 1620
BstXI	CCANNNNNNTGG	1 cut(s)	922
BstYI	RGATCY	4 cut(s)	851, 1090, 1535, 1620
BstZ17I	GTATAC	1 cut(s)	906
BstZI	CGGCCG	1 cut(s)	420
BsuI	GTATCC	1 cut(s)	1815
BsuRI	GGCC	7 cut(s)	109, 209, 333, 422, 470, 926, 1985
BtgI	CCRYGG	2 cut(s)	94, 1539
BtsCI	GGATG	5 cut(s)	47, 354, 517, 1414, 1730
BtsIMutI	CAGTG	3 cut(s)	719, 1193, 1505
BveI	ACCTGC	2 cut(s)	1218, 1349
CaiI	CAGNNNCTG	1 cut(s)	1976
CciI	TCATGA	3 cut(s)	727, 1021, 1282
CfoI	GCGC	2 cut(s)	103, 1448
Cfr10I	RCCGGY	4 cut(s)	458, 482, 542, 2028
Cfr13I	GGNCC	5 cut(s)	207, 208, 217, 337, 1983
CseI	GACGC	2 cut(s)	451, 488
Csp6I	GTAC	5 cut(s)	912, 1298, 1302, 1496, 1968
CviQI	GTAC	5 cut(s)	912, 1298, 1302, 1496, 1968
DdeI	CTNAG	7 cut(s)	181, 269, 528, 1057, 1442, 1841, 2009
DpnI	GATC	7 cut(s)	853, 1029, 1092, 1203, 1537, 1622, 2088
DpnII	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
DrdI	GACNNNNNNGTC	1 cut(s)	251
DseDI	GACNNNNNNGTC	1 cut(s)	251
EaeI	YGGCCR	3 cut(s)	107, 420, 468
EagI	CGGCCG	1 cut(s)	420
Eam1104I	CTCTTC	4 cut(s)	95, 199, 859, 964
EarI	CTCTTC	4 cut(s)	95, 199, 859, 964
EciI	GGCGGA	1 cut(s)	178
Ecl136II	GAGCTC	1 cut(s)	277
EclXI	CGGCCG	1 cut(s)	420
Eco105I	TACGTA	2 cut(s)	1301, 1967
Eco130I	CCWWGG	2 cut(s)	1392, 1539
Eco24I	GRGCYC	3 cut(s)	211, 279, 373
Eco47I	GGWCC	2 cut(s)	217, 337
Eco52I	CGGCCG	1 cut(s)	420
Eco53kI	GAGCTC	1 cut(s)	277
Eco57I	CTGAAG	1 cut(s)	1314
EcoICRI	GAGCTC	1 cut(s)	277
EcoO109I	RGGNCCY	1 cut(s)	207
EcoRII	CCWGG	5 cut(s)	333, 384, 1030, 1428, 2014
EcoT14I	CCWWGG	2 cut(s)	1392, 1539
EcoT22I	ATGCAT	1 cut(s)	1890
EcoT38I	GRGCYC	3 cut(s)	211, 279, 373
ErhI	CCWWGG	2 cut(s)	1392, 1539
Esp3I	CGTCTC	1 cut(s)	137
FalI	AAGNNNNNCTT	4 cut(s)	302, 334, 427, 459
FaqI	GGGAC	4 cut(s)	29, 323, 1370, 1930
FblI	GTMKAC	1 cut(s)	905
Fnu4HI	GCNGC	8 cut(s)	171, 351, 363, 423, 426, 1225, 1308, 1437
FokI	GGATG	5 cut(s)	34, 341, 504, 1421, 1737
FriOI	GRGCYC	3 cut(s)	211, 279, 373
Fsp4HI	GCNGC	8 cut(s)	171, 351, 363, 423, 426, 1225, 1308, 1437
FspBI	CTAG	5 cut(s)	366, 803, 1103, 1233, 2096
GlaI	GCGC	2 cut(s)	102, 1447
GluI	GCNGC	8 cut(s)	171, 351, 363, 423, 426, 1225, 1308, 1437
GsaI	CCCAGC	1 cut(s)	382
GsuI	CTGGAG	2 cut(s)	52, 121
HaeIII	GGCC	7 cut(s)	109, 209, 333, 422, 470, 926, 1985
HapII	CCGG	6 cut(s)	30, 229, 459, 483, 543, 2029
HgaI	GACGC	2 cut(s)	451, 488
HhaI	GCGC	2 cut(s)	103, 1448
Hin1I	GRCGYC	3 cut(s)	252, 462, 480
Hin6I	GCGC	2 cut(s)	101, 1446
HinP1I	GCGC	2 cut(s)	101, 1446
HindIII	AAGCTT	2 cut(s)	436, 2105
HinfI	GANTC	6 cut(s)	245, 797, 1153, 1544, 1711, 1993
HpaII	CCGG	6 cut(s)	30, 229, 459, 483, 543, 2029
HphI	GGTGA	3 cut(s)	168, 231, 2159
Hpy166II	GTNNAC	5 cut(s)	6, 548, 906, 1613, 1635
Hpy8I	GTNNAC	5 cut(s)	6, 548, 906, 1613, 1635
Hpy99I	CGWCG	6 cut(s)	151, 154, 157, 160, 254, 482
HpyAV	CCTTC	8 cut(s)	6, 328, 611, 709, 758, 767, 1172, 1425
HpyCH4III	ACNGT	4 cut(s)	723, 1500, 1552, 1657
HpyCH4IV	ACGT	6 cut(s)	252, 550, 1300, 1421, 1800, 1966
HpyF3I	CTNAG	7 cut(s)	181, 269, 528, 1057, 1442, 1841, 2009
HpySE526I	ACGT	6 cut(s)	252, 550, 1300, 1421, 1800, 1966
Hsp92I	GRCGYC	3 cut(s)	252, 462, 480
HspAI	GCGC	2 cut(s)	101, 1446
KroI	GCCGGC	3 cut(s)	458, 482, 2028
KroNI	GCCGGC	3 cut(s)	460, 484, 2030
Kzo9I	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
LguI	GCTCTTC	2 cut(s)	95, 859
LmnI	GCTCC	3 cut(s)	98, 589, 1057
Lsp1109I	GCAGC	4 cut(s)	182, 1211, 1319, 1448
MaeI	CTAG	5 cut(s)	366, 803, 1103, 1233, 2096
MaeII	ACGT	6 cut(s)	252, 550, 1300, 1421, 1800, 1966
MaeIII	GTNAC	3 cut(s)	118, 658, 1664
MalI	GATC	7 cut(s)	853, 1029, 1092, 1203, 1537, 1622, 2088
MboI	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
MboII	GAAGA	7 cut(s)	82, 186, 617, 876, 951, 1615, 1635
MflI	RGATCY	4 cut(s)	851, 1090, 1535, 1620
MhlI	GDGCHC	4 cut(s)	211, 279, 373, 550
MlsI	TGGCCA	2 cut(s)	109, 470
MluNI	TGGCCA	2 cut(s)	109, 470
MlyI	GAGTC	3 cut(s)	239, 806, 1162
MmeI	TCCRAC	3 cut(s)	273, 1021, 1197
Mox20I	TGGCCA	2 cut(s)	109, 470
Mph1103I	ATGCAT	1 cut(s)	1890
MreI	CGCCGGCG	1 cut(s)	482
MroNI	GCCGGC	3 cut(s)	458, 482, 2028
MscI	TGGCCA	2 cut(s)	109, 470
MseI	TTAA	5 cut(s)	557, 1073, 1322, 1559, 1577
MslI	CAYNNNNRTG	4 cut(s)	522, 693, 732, 812
Msp20I	TGGCCA	2 cut(s)	109, 470
MspA1I	CMGCKG	1 cut(s)	2123
MspCI	CTTAAG	1 cut(s)	556
MspI	CCGG	6 cut(s)	30, 229, 459, 483, 543, 2029
MspR9I	CCNGG	6 cut(s)	229, 335, 386, 1032, 1430, 2016
MvaI	CCWGG	5 cut(s)	335, 386, 1032, 1430, 2016
MvnI	CGCG	2 cut(s)	103, 1448
NaeI	GCCGGC	3 cut(s)	460, 484, 2030
NciI	CCSGG	1 cut(s)	229
NcoI	CCATGG	1 cut(s)	1539
NdeII	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
NgoMIV	GCCGGC	3 cut(s)	458, 482, 2028
NlaIV	GGNNCC	4 cut(s)	208, 209, 339, 585
NmeAIII	GCCGAG	1 cut(s)	309
NmuCI	GTSAC	2 cut(s)	118, 1664
NsiI	ATGCAT	1 cut(s)	1890
NspI	RCATGY	1 cut(s)	119
PagI	TCATGA	3 cut(s)	727, 1021, 1282
PciSI	GCTCTTC	2 cut(s)	95, 859
PcsI	WCGNNNNNNNCGW	5 cut(s)	152, 155, 459, 483, 2052
PdiI	GCCGGC	3 cut(s)	460, 484, 2030
PfeI	GAWTC	3 cut(s)	1544, 1711, 1993
Pfl23II	CGTACG	1 cut(s)	1301
PkrI	GCNGC	8 cut(s)	172, 352, 364, 424, 427, 1226, 1309, 1438
PleI	GAGTC	3 cut(s)	239, 805, 1161
PpsI	GAGTC	3 cut(s)	239, 805, 1161
Ppu21I	YACGTR	2 cut(s)	1301, 1967
PsiI	TTATAA	1 cut(s)	947
Psp124BI	GAGCTC	1 cut(s)	279
Psp1406I	AACGTT	1 cut(s)	1800
Psp6I	CCWGG	5 cut(s)	333, 384, 1030, 1428, 2014
PspFI	CCCAGC	1 cut(s)	378
PspGI	CCWGG	5 cut(s)	333, 384, 1030, 1428, 2014
PspLI	CGTACG	1 cut(s)	1301
PspN4I	GGNNCC	4 cut(s)	208, 209, 339, 585
PspOMI	GGGCCC	1 cut(s)	207
PspPI	GGNCC	5 cut(s)	207, 208, 217, 337, 1983
PstI	CTGCAG	1 cut(s)	1229
PstNI	CAGNNNCTG	1 cut(s)	1976
PsuI	RGATCY	4 cut(s)	851, 1090, 1535, 1620
RsaI	GTAC	5 cut(s)	913, 1299, 1303, 1497, 1969
RsaNI	GTAC	5 cut(s)	912, 1298, 1302, 1496, 1968
RseI	CAYNNNNRTG	4 cut(s)	522, 693, 732, 812
SacI	GAGCTC	1 cut(s)	279
SapI	GCTCTTC	2 cut(s)	95, 859
SaqAI	TTAA	5 cut(s)	557, 1073, 1322, 1559, 1577
SatI	GCNGC	8 cut(s)	171, 351, 363, 423, 426, 1225, 1308, 1437
Sau3AI	GATC	7 cut(s)	851, 1027, 1090, 1201, 1535, 1620, 2086
Sau96I	GGNCC	5 cut(s)	207, 208, 217, 337, 1983
SchI	GAGTC	3 cut(s)	239, 806, 1162
ScrFI	CCNGG	6 cut(s)	229, 335, 386, 1032, 1430, 2016
SduI	GDGCHC	4 cut(s)	211, 279, 373, 550
SfcI	CTRYAG	3 cut(s)	79, 1094, 1225
SgrAI	CRCCGGYG	1 cut(s)	482
SinI	GGWCC	2 cut(s)	217, 337
SmiMI	CAYNNNNRTG	4 cut(s)	522, 693, 732, 812
SmlI	CTYRAG	5 cut(s)	260, 278, 556, 1934, 2064
SmoI	CTYRAG	5 cut(s)	260, 278, 556, 1934, 2064
SnaBI	TACGTA	2 cut(s)	1301, 1967
SspI	AATATT	1 cut(s)	1185
SspMI	CTAG	5 cut(s)	366, 803, 1103, 1233, 2096
SstI	GAGCTC	1 cut(s)	279
StyD4I	CCNGG	6 cut(s)	227, 333, 384, 1030, 1428, 2014
StyI	CCWWGG	2 cut(s)	1392, 1539
TaaI	ACNGT	4 cut(s)	723, 1500, 1552, 1657
TaiI	ACGT	6 cut(s)	255, 553, 1303, 1424, 1803, 1969
TaqI	TCGA	4 cut(s)	453, 477, 537, 2110
TaqII	GACCGA	1 cut(s)	1326
TatI	WGTACW	1 cut(s)	1495
TauI	GCSGC	4 cut(s)	353, 365, 425, 428
TfiI	GAWTC	3 cut(s)	1544, 1711, 1993
Tru1I	TTAA	5 cut(s)	557, 1073, 1322, 1559, 1577
Tru9I	TTAA	5 cut(s)	557, 1073, 1322, 1559, 1577
TscAI	CASTG	3 cut(s)	726, 1200, 1505
TseFI	GTSAC	2 cut(s)	118, 1664
TseI	GCWGC	4 cut(s)	170, 1224, 1307, 1436
Tsp45I	GTSAC	2 cut(s)	118, 1664
TspGWI	ACGGA	2 cut(s)	83, 1146
TspRI	CASTG	3 cut(s)	726, 1200, 1505
Vha464I	CTTAAG	1 cut(s)	556
VneI	GTGCAC	1 cut(s)	546
VpaK11BI	GGWCC	2 cut(s)	217, 337
XapI	RAATTY	3 cut(s)	1348, 1815, 1865
XbaI	TCTAGA	1 cut(s)	1232
XceI	RCATGY	1 cut(s)	119
XmiI	GTMKAC	1 cut(s)	905
XspI	CTAG	5 cut(s)	366, 803, 1103, 1233, 2096
ZraI	GACGTC	1 cut(s)	253
Zsp2I	ATGCAT	1 cut(s)	1890

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.