Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0013719

Physical Location & Seq

Genomic Coordinates Reverse (-)

28045607 .. 28050722

Gene Structure 5116 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1195800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGGACTCCAACAACACTTCCTACACTCCCTTGCCGGGAGAAGACCCCTCCGCAGCCGTCCCTCCGCCGACTCATCGCAGACCCCTTAAGGTTTTTGCCGTCACATTCTCCTCGGTCATATTCCTCTTGTCATTGGTCACGTTAATAATCCACCAAGGACCGGGAGCGCCACCAAAGACAGTGCCAGAACAACCAGATCACGACCACCGCCACCAGCAGCCGGCAGCTTCAACTAGTCCAGAACCGAGGTCGTTCTCAGTGCCTAGGGGAAAACTAGAAGGCGTATCGGCCAAATCGAGTCCATATTTTTCAGAGGAAGCTTCGTATAACTGGACGAATGCTATGTTTTCTTGGCAACGAACTGCCTTCCATTTCCAACCAGAACACAATTGGATGAATGGTCCATTGTTTTACAAGGGATGGTATCACCTATTCTACCAGTACAATCCGGACTCAGCTGTGTGGGGAAACATCACATGGGGCCATGCAGTATCAACGGACATGATTCATTGGCTCTACCTCCCGCTCGCCATGGTCCCCGATCGATGGTACGATGCGAACGGGGTGTGGACCGGGTCCGCCACCATACTCCCTAATGGCGAAATCATGATTCTGTACACCGGAAGCACCAACGATTCCGTGCAAGTACAGAATCTCGCCTACCCCGCCAACCTATCGGATCCCCTCCTTCTTGATTGGATCAAGTACAAGGGTAATCCGGTTTTGACTCCGCCATCAGGAATCGGATCCACGGATTTTCGTGACCCCACAACCGCGTGGATCGGTCCCGATGGCAAATGGCGCATTACCATTGGATCAAAAATCAACACAACCGGCATTTCAATGGTGTACACCACAACCGATTTTATAAACTATGAGCTCCATGATGGGGTCTTGCATGAGGTCCCGGGTACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCTATAAACGGGACCAAGGGTGTGGAAACGTCCGTAAACAACGACGGAGTTAAGCACGTGCTGAAGGCTAGTTTGGATGACACAAAATTGGATCACTACGCAATTGGGACTTACTTTATAGAGAATGAGACATGGGTGCCCGATGACCCGACTATCGACGTCGGTATCGGGTTGAGGTACGACTATGGAAGGTACTATGCATCAAAGACATTTTACGATCAAAATAAGGAGAGAAGGATCTTGTGGGGTTGGATTAATGAAACGGATACTGCAACTGATGATTTGGAGAAGGGCTGGTCCTCGCTTCAGACCATTCCAAGGACTGTGTTGTTCGATAGCAAAACTGGAACCAATTTGCTTCAATGGCCAGTGGAGGAGATTGAAGACTTGAGATTAAACAGTACCGAGTTTACTGATGTTTTGGTTGAAGCTGGAACAACTGTGCCACTTGATATTGGAACGGCTACACAATTGGACATACTCGTCGACTTTGAAATTGAATTATTGGGTACAGAGGAGAGTGTGAATGGGAGTTCAGGGTGTGGCGATGGTGCTGCAGATAGGAGCACATTCGGACCCTTTGGCATTTTGGCTCTTGCAGATGAAACTCTTTCCGAGTTCACCCCAGTTTATTTCCGAGTTACCAACTCGACCGATGGGGACGTCACAACTTACTTCTGCGCCGATGAATTGAGGTCCTCCAGGGCTCCTGAAGTCTTCAAACAAGTTTATGGAGGCGAAGTTCCTGTGTTGGATGGTGAAACATATTCTGCTAGAGTATTGGTTGATCATTCGATCCTGGAAAGCTACGCGCAAGGGGGCAGGACGGTAATTTCATCGCGGGTTTACCCAACAGAAGCAATCTATGGAGCAGCAAGGCTGTTCTTGTTCAACAATGCAACAGGAATGAATGTCAAGGCTACCCTCAAGATCTGGCAGCTCAACTCAGCCTTCATTCATCCATTCCCATTAGACCAGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

DUF3357 Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

644

Amino Acids

71.57

Weight (kDa)

4.72

Isoelectric Point (pI)

37.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
INV_N	PF11837	7 - 115	1.5e-16	Beta-fructofuranosidase, N-terminal domain
Glyco_hydro_32N	PF00251	124 - 439	5.6e-96	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	442 - 629	2.1e-19	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013719)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g27630 FvH4_7g27630 FvH4_7g27630
malus_domestica	MD07G1254500.v1.1 MD11G1195800.v1.1
prunus_persica	Prupe.2G277900_v2.0.a1 Prupe.2G277900_v2.0.a1 Prupe.2G277900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0374511
rosa_laevigata	RLG00000026733
rosa_multiflora	Rmu_ssc0000007.1_g000003
rosa_roxburghii	Rroxscaffold_4G00283440
rosa_rugosa	Rorug01G0383900
rosa_samantha	Rh1AG394400 Rh1BG359000 Rh1CG372100 Rh1DG389600
rosa_wichuraiana	Rw1G034170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	869
AasI	GACNNNNNNGTC	1 cut(s)	1430
AatII	GACGTC	2 cut(s)	1110, 1614
AccB1I	GGYRCC	1 cut(s)	1084
AccBSI	CCGCTC	1 cut(s)	526
AccI	GTMKAC	1 cut(s)	1434
AccII	CGCG	3 cut(s)	776, 1760, 1789
AccIII	TCCGGA	1 cut(s)	448
AciI	CCGC	9 cut(s)	51, 65, 208, 524, 579, 666, 731, 774, 1789
AcoI	YGGCCR	2 cut(s)	288, 1313
AcuI	CTGAAG	3 cut(s)	1031, 1238, 1680
AcvI	CACGTG	1 cut(s)	1006
AcyI	GRCGYC	2 cut(s)	1107, 1611
AfiI	CCNNNNNNNGG	9 cut(s)	35, 160, 220, 546, 737, 889, 913, 914, 1266
AflII	CTTAAG	1 cut(s)	86
AgsI	TTSAA	9 cut(s)	231, 843, 1310, 1331, 1376, 1442, 1448, 1669, 1840
AhlI	ACTAGT	1 cut(s)	233
AjnI	CCWGG	3 cut(s)	1649, 1746, 1923
AjuI	GAANNNNNNNTTGG	2 cut(s)	1004, 1036
AloI	GAACNNNNNNTCC	2 cut(s)	1674, 1706
AluBI	AGCT	7 cut(s)	227, 320, 458, 880, 1379, 1755, 1888
AluI	AGCT	7 cut(s)	227, 320, 458, 880, 1379, 1755, 1888
Alw21I	GWGCWC	2 cut(s)	882, 1517
Alw26I	GTCTC	1 cut(s)	1070
Ama87I	CYCGRG	1 cut(s)	907
Aor13HI	TCCGGA	1 cut(s)	448
AoxI	GGCC	3 cut(s)	288, 481, 1313
ApeKI	GCWGC	6 cut(s)	53, 217, 224, 1502, 1820, 1885
AseI	ATTAAT	1 cut(s)	1203
AspA2I	CCTAGG	1 cut(s)	263
AspLEI	GCGC	4 cut(s)	169, 804, 1631, 1762
AsuC2I	CCSGG	6 cut(s)	36, 162, 574, 908, 909, 944
AsuHPI	GGTGA	3 cut(s)	419, 1561, 1718
AvaI	CYCGRG	1 cut(s)	907
AvrII	CCTAGG	1 cut(s)	263
BaeGI	GKGCMC	1 cut(s)	1089
BaeI	ACNNNNGTAYC	2 cut(s)	1096, 1129
BalI	TGGCCA	1 cut(s)	1315
BamHI	GGATCC	2 cut(s)	679, 746
BanI	GGYRCC	1 cut(s)	1084
BanII	GRGCYC	2 cut(s)	882, 1657
BbrPI	CACGTG	1 cut(s)	1006
BbsI	GAAGAC	3 cut(s)	48, 1338, 1657
Bbv12I	GWGCWC	2 cut(s)	882, 1517
BbvI	GCAGC	6 cut(s)	65, 229, 236, 1489, 1832, 1897
BccI	CCATC	8 cut(s)	414, 540, 742, 785, 881, 1490, 1598, 1697
BceAI	ACGGC	3 cut(s)	41, 83, 1425
BcgI	CGANNNNNNTGC	2 cut(s)	1484, 1518
BciT130I	CCWGG	3 cut(s)	1651, 1748, 1925
BciVI	GTATCC	1 cut(s)	1207
BclI	TGATCA	1 cut(s)	1735
BcnI	CCSGG	6 cut(s)	36, 162, 574, 908, 909, 944
BcoDI	GTCTC	1 cut(s)	1070
BcuI	ACTAGT	1 cut(s)	233
BfaI	CTAG	5 cut(s)	234, 264, 275, 1017, 1722
BfmI	CTRYAG	1 cut(s)	1503
BfoI	RGCGCY	1 cut(s)	170
BfrI	CTTAAG	1 cut(s)	86
BfuI	GTATCC	1 cut(s)	1207
BglII	AGATCT	1 cut(s)	1878
BisI	GCNGC	6 cut(s)	54, 218, 225, 1503, 1821, 1886
BlnI	CCTAGG	1 cut(s)	263
BlsI	GCNGC	6 cut(s)	55, 219, 226, 1504, 1822, 1887
Bme1390I	CCNGG	9 cut(s)	36, 162, 574, 908, 909, 944, 1651, 1748, 1925
BmeT110I	CYCGRG	1 cut(s)	907
BmrFI	CCNGG	9 cut(s)	36, 162, 574, 908, 909, 944, 1651, 1748, 1925
BmrI	ACTGGG	1 cut(s)	1568
BmsI	GCATC	2 cut(s)	544, 1157
BmuI	ACTGGG	1 cut(s)	1568
BpiI	GAAGAC	3 cut(s)	48, 1338, 1657
BpmI	CTGGAG	1 cut(s)	1633
BpuEI	CTTGAG	2 cut(s)	1357, 1859
BpuMI	CCSGG	6 cut(s)	36, 162, 574, 908, 909, 944
Bsa29I	ATCGAT	1 cut(s)	544
BsaAI	YACGTR	1 cut(s)	1006
BsaHI	GRCGYC	2 cut(s)	1107, 1611
BsaWI	WCCGGW	3 cut(s)	448, 620, 718
BsaXI	ACNNNNNCTCC	2 cut(s)	1674, 1704
Bsc4I	CCNNNNNNNGG	9 cut(s)	35, 160, 220, 546, 737, 889, 913, 914, 1266
Bse118I	RCCGGY	2 cut(s)	220, 833
Bse1I	ACTGG	5 cut(s)	335, 439, 1297, 1316, 1574
BseAI	TCCGGA	1 cut(s)	448
BseBI	CCWGG	3 cut(s)	1651, 1748, 1925
BseCI	ATCGAT	1 cut(s)	544
BseGI	GGATG	5 cut(s)	399, 425, 1030, 1708, 1906
BseLI	CCNNNNNNNGG	9 cut(s)	35, 160, 220, 546, 737, 889, 913, 914, 1266
BseMII	CTCAG	3 cut(s)	270, 468, 1908
BseNI	ACTGG	5 cut(s)	335, 439, 1297, 1316, 1574
BseRI	GAGGAG	3 cut(s)	100, 1337, 1478
BseSI	GKGCMC	1 cut(s)	1089
BseXI	GCAGC	6 cut(s)	65, 229, 236, 1489, 1832, 1897
Bsh1236I	CGCG	3 cut(s)	776, 1760, 1789
Bsh1285I	CGRYCG	2 cut(s)	544, 1602
BshFI	GGCC	3 cut(s)	290, 483, 1315
BshNI	GGYRCC	1 cut(s)	1084
BshVI	ATCGAT	1 cut(s)	544
BsiEI	CGRYCG	2 cut(s)	544, 1602
BsiHKAI	GWGCWC	2 cut(s)	882, 1517
BsiHKCI	CYCGRG	1 cut(s)	907
BslFI	GGGAC	7 cut(s)	44, 521, 771, 890, 973, 1069, 1622
BslI	CCNNNNNNNGG	9 cut(s)	35, 160, 220, 546, 737, 889, 913, 914, 1266
BsmAI	GTCTC	1 cut(s)	1070
BsmFI	GGGAC	7 cut(s)	44, 521, 771, 890, 973, 1069, 1622
BsmI	GAATGC	1 cut(s)	343
BsnI	GGCC	3 cut(s)	290, 483, 1315
BsoBI	CYCGRG	1 cut(s)	907
Bsp1286I	GDGCHC	4 cut(s)	882, 1089, 1517, 1657
Bsp13I	TCCGGA	1 cut(s)	448
Bsp1407I	TGTACA	2 cut(s)	615, 849
Bsp19I	CCATGG	1 cut(s)	531
BspACI	CCGC	9 cut(s)	51, 65, 208, 524, 579, 666, 731, 774, 1789
BspANI	GGCC	3 cut(s)	290, 483, 1315
BspCNI	CTCAG	3 cut(s)	269, 467, 1907
BspDI	ATCGAT	1 cut(s)	544
BspEI	TCCGGA	1 cut(s)	448
BspFNI	CGCG	3 cut(s)	776, 1760, 1789
BspHI	TCATGA	1 cut(s)	606
BspMAI	CTGCAG	1 cut(s)	1507
BspT107I	GGYRCC	1 cut(s)	1084
BspTI	CTTAAG	1 cut(s)	86
BsrBI	CCGCTC	1 cut(s)	526
BsrFI	RCCGGY	2 cut(s)	220, 833
BsrGI	TGTACA	2 cut(s)	615, 849
BsrI	ACTGG	5 cut(s)	335, 439, 1297, 1316, 1574
BssAI	RCCGGY	2 cut(s)	220, 833
BssNI	GRCGYC	2 cut(s)	1107, 1611
BssT1I	CCWWGG	5 cut(s)	154, 263, 531, 963, 1265
Bst2UI	CCWGG	3 cut(s)	1651, 1748, 1925
Bst4CI	ACNGT	5 cut(s)	181, 1273, 1349, 1390, 1777
BstACI	GRCGYC	2 cut(s)	1107, 1611
BstAFI	CTTAAG	1 cut(s)	86
BstAUI	TGTACA	2 cut(s)	615, 849
BstBAI	YACGTR	1 cut(s)	1006
BstC8I	GCNNGC	2 cut(s)	222, 528
BstDEI	CTNAG	3 cut(s)	256, 454, 1894
BstDSI	CCRYGG	2 cut(s)	531, 750
BstF5I	GGATG	5 cut(s)	399, 425, 1030, 1708, 1906
BstFNI	CGCG	3 cut(s)	776, 1760, 1789
BstH2I	RGCGCY	1 cut(s)	170
BstHHI	GCGC	4 cut(s)	169, 804, 1631, 1762
BstMAI	GTCTC	1 cut(s)	1070
BstMCI	CGRYCG	2 cut(s)	544, 1602
BstMWI	GCNNNNNNNGC	3 cut(s)	665, 801, 1312
BstNI	CCWGG	3 cut(s)	1651, 1748, 1925
BstSCI	CCNGG	9 cut(s)	34, 160, 572, 906, 907, 942, 1649, 1746, 1923
BstSFI	CTRYAG	1 cut(s)	1503
BstSLI	GKGCMC	1 cut(s)	1089
BstUI	CGCG	3 cut(s)	776, 1760, 1789
BstV1I	GCAGC	6 cut(s)	65, 229, 236, 1489, 1832, 1897
BstV2I	GAAGAC	3 cut(s)	48, 1338, 1657
BstX2I	RGATCY	4 cut(s)	679, 746, 1185, 1878
BstXI	CCANNNNNNTGG	1 cut(s)	970
BstYI	RGATCY	4 cut(s)	679, 746, 1185, 1878
Bsu15I	ATCGAT	1 cut(s)	544
BsuI	GTATCC	1 cut(s)	1207
BsuRI	GGCC	3 cut(s)	290, 483, 1315
BsuTUI	ATCGAT	1 cut(s)	544
BtgI	CCRYGG	2 cut(s)	531, 750
BtgZI	GCGATG	3 cut(s)	59, 1509, 1770
BtsCI	GGATG	5 cut(s)	399, 425, 1030, 1708, 1906
BtsIMutI	CAGTG	3 cut(s)	186, 264, 1323
Cac8I	GCNNGC	2 cut(s)	222, 528
CciI	TCATGA	1 cut(s)	606
CfoI	GCGC	4 cut(s)	169, 804, 1631, 1762
Cfr10I	RCCGGY	2 cut(s)	220, 833
Cfr9I	CCCGGG	1 cut(s)	907
ClaI	ATCGAT	1 cut(s)	544
CsiI	ACCWGGT	1 cut(s)	1923
CviAII	CATG	8 cut(s)	477, 485, 502, 532, 607, 884, 899, 1080
DdeI	CTNAG	3 cut(s)	256, 454, 1894
DrdI	GACNNNNNNGTC	1 cut(s)	1430
DseDI	GACNNNNNNGTC	1 cut(s)	1430
EaeI	YGGCCR	2 cut(s)	288, 1313
EciI	GGCGGA	3 cut(s)	54, 568, 720
Ecl136II	GAGCTC	1 cut(s)	880
Eco130I	CCWWGG	5 cut(s)	154, 263, 531, 963, 1265
Eco24I	GRGCYC	2 cut(s)	882, 1657
Eco53kI	GAGCTC	1 cut(s)	880
Eco57I	CTGAAG	3 cut(s)	1031, 1238, 1680
Eco72I	CACGTG	1 cut(s)	1006
Eco88I	CYCGRG	1 cut(s)	907
EcoICRI	GAGCTC	1 cut(s)	880
EcoO109I	RGGNCCY	2 cut(s)	904, 1644
EcoRII	CCWGG	3 cut(s)	1649, 1746, 1923
EcoT14I	CCWWGG	5 cut(s)	154, 263, 531, 963, 1265
EcoT22I	ATGCAT	1 cut(s)	1150
EcoT38I	GRGCYC	2 cut(s)	882, 1657
ErhI	CCWWGG	5 cut(s)	154, 263, 531, 963, 1265
FaeI	CATG	8 cut(s)	480, 488, 505, 535, 610, 887, 902, 1083
FaqI	GGGAC	7 cut(s)	44, 521, 771, 890, 973, 1069, 1622
FatI	CATG	8 cut(s)	476, 484, 501, 531, 606, 883, 898, 1079
FauI	CCCGC	3 cut(s)	531, 673, 1782
FbaI	TGATCA	1 cut(s)	1735
FblI	GTMKAC	1 cut(s)	1434
Fnu4HI	GCNGC	6 cut(s)	54, 218, 225, 1503, 1821, 1886
FokI	GGATG	5 cut(s)	406, 432, 1037, 1715, 1893
FriOI	GRGCYC	2 cut(s)	882, 1657
Fsp4HI	GCNGC	6 cut(s)	54, 218, 225, 1503, 1821, 1886
FspBI	CTAG	5 cut(s)	234, 264, 275, 1017, 1722
GlaI	GCGC	4 cut(s)	168, 803, 1630, 1761
GluI	GCNGC	6 cut(s)	54, 218, 225, 1503, 1821, 1886
GsuI	CTGGAG	1 cut(s)	1633
HaeII	RGCGCY	1 cut(s)	170
HaeIII	GGCC	3 cut(s)	290, 483, 1315
HhaI	GCGC	4 cut(s)	169, 804, 1631, 1762
Hin1I	GRCGYC	2 cut(s)	1107, 1611
Hin1II	CATG	8 cut(s)	480, 488, 505, 535, 610, 887, 902, 1083
Hin6I	GCGC	4 cut(s)	167, 802, 1629, 1760
HinP1I	GCGC	4 cut(s)	167, 802, 1629, 1760
HincII	GTYRAC	1 cut(s)	1435
HindII	GTYRAC	1 cut(s)	1435
HindIII	AAGCTT	1 cut(s)	318
HphI	GGTGA	3 cut(s)	419, 1561, 1718
Hpy188I	TCNGA	7 cut(s)	313, 679, 746, 1257, 1523, 1564, 1586
Hpy99I	CGWCG	4 cut(s)	995, 1109, 1112, 1436
HpyAV	CCTTC	8 cut(s)	272, 376, 698, 1006, 1131, 1176, 1231, 1909
HpyCH4III	ACNGT	5 cut(s)	181, 1273, 1349, 1390, 1777
HpyCH4IV	ACGT	5 cut(s)	140, 977, 1005, 1107, 1611
HpyCH4V	TGCA	8 cut(s)	488, 643, 898, 1148, 1220, 1505, 1547, 1847
HpyF10VI	GCNNNNNNNGC	3 cut(s)	665, 801, 1312
HpyF3I	CTNAG	3 cut(s)	256, 454, 1894
HpySE526I	ACGT	5 cut(s)	140, 977, 1005, 1107, 1611
Hsp92I	GRCGYC	2 cut(s)	1107, 1611
Hsp92II	CATG	8 cut(s)	480, 488, 505, 535, 610, 887, 902, 1083
HspAI	GCGC	4 cut(s)	167, 802, 1629, 1760
Kpn2I	TCCGGA	1 cut(s)	448
KroI	GCCGGC	1 cut(s)	220
KroNI	GCCGGC	1 cut(s)	222
Ksp22I	TGATCA	1 cut(s)	1735
LmnI	GCTCC	5 cut(s)	164, 885, 1512, 1660, 1817
Lsp1109I	GCAGC	6 cut(s)	65, 229, 236, 1489, 1832, 1897
LweI	GCATC	2 cut(s)	544, 1157
MabI	ACCWGGT	1 cut(s)	1923
MaeI	CTAG	5 cut(s)	234, 264, 275, 1017, 1722
MaeII	ACGT	5 cut(s)	140, 977, 1005, 1107, 1611
MaeIII	GTNAC	5 cut(s)	100, 136, 761, 1588, 1612
MbiI	CCGCTC	1 cut(s)	526
MboII	GAAGA	3 cut(s)	53, 1343, 1657
MfeI	CAATTG	3 cut(s)	388, 1050, 1418
MflI	RGATCY	4 cut(s)	679, 746, 1185, 1878
MhlI	GDGCHC	4 cut(s)	882, 1089, 1517, 1657
MlsI	TGGCCA	1 cut(s)	1315
MluCI	AATT	9 cut(s)	388, 1034, 1050, 1300, 1418, 1443, 1448, 1637, 1779
MluNI	TGGCCA	1 cut(s)	1315
MlyI	GAGTC	4 cut(s)	64, 307, 446, 721
MmeI	TCCRAC	4 cut(s)	33, 400, 1178, 1680
Mox20I	TGGCCA	1 cut(s)	1315
Mph1103I	ATGCAT	1 cut(s)	1150
MroI	TCCGGA	1 cut(s)	448
MroNI	GCCGGC	1 cut(s)	220
MscI	TGGCCA	1 cut(s)	1315
MseI	TTAA	6 cut(s)	87, 143, 999, 1203, 1343, 1930
MslI	CAYNNNNRTG	1 cut(s)	842
Msp20I	TGGCCA	1 cut(s)	1315
MspA1I	CMGCKG	1 cut(s)	458
MspCI	CTTAAG	1 cut(s)	86
MspR9I	CCNGG	9 cut(s)	36, 162, 574, 908, 909, 944, 1651, 1748, 1925
MunI	CAATTG	3 cut(s)	388, 1050, 1418
Mva1269I	GAATGC	1 cut(s)	343
MvaI	CCWGG	3 cut(s)	1651, 1748, 1925
MvnI	CGCG	3 cut(s)	776, 1760, 1789
MwoI	GCNNNNNNNGC	3 cut(s)	665, 801, 1312
NaeI	GCCGGC	1 cut(s)	222
NciI	CCSGG	6 cut(s)	36, 162, 574, 908, 909, 944
NcoI	CCATGG	1 cut(s)	531
NgoMIV	GCCGGC	1 cut(s)	220
NlaIII	CATG	8 cut(s)	480, 488, 505, 535, 610, 887, 902, 1083
NmuCI	GTSAC	4 cut(s)	100, 136, 761, 1612
NsiI	ATGCAT	1 cut(s)	1150
PagI	TCATGA	1 cut(s)	606
PcsI	WCGNNNNNNNCGW	1 cut(s)	293
PctI	GAATGC	1 cut(s)	343
PdiI	GCCGGC	1 cut(s)	222
PfeI	GAWTC	5 cut(s)	505, 610, 635, 652, 741
PflFI	GACNNNGTC	1 cut(s)	574
PfoI	TCCNGGA	1 cut(s)	1746
PkrI	GCNGC	6 cut(s)	55, 219, 226, 1504, 1822, 1887
Ple19I	CGATCG	1 cut(s)	544
PleI	GAGTC	4 cut(s)	64, 306, 446, 721
PmaCI	CACGTG	1 cut(s)	1006
PmlI	CACGTG	1 cut(s)	1006
PpsI	GAGTC	4 cut(s)	64, 306, 446, 721
Ppu21I	YACGTR	1 cut(s)	1006
PpuMI	RGGWCCY	2 cut(s)	904, 1644
PshBI	ATTAAT	1 cut(s)	1203
PsiI	TTATAA	1 cut(s)	869
Psp124BI	GAGCTC	1 cut(s)	882
Psp5II	RGGWCCY	2 cut(s)	904, 1644
Psp6I	CCWGG	3 cut(s)	1649, 1746, 1923
PspCI	CACGTG	1 cut(s)	1006
PspGI	CCWGG	3 cut(s)	1649, 1746, 1923
PspPPI	RGGWCCY	2 cut(s)	904, 1644
PstI	CTGCAG	1 cut(s)	1507
PsuI	RGATCY	4 cut(s)	679, 746, 1185, 1878
PsyI	GACNNNGTC	1 cut(s)	574
PvuI	CGATCG	1 cut(s)	544
PvuII	CAGCTG	1 cut(s)	458
RseI	CAYNNNNRTG	1 cut(s)	842
SacI	GAGCTC	1 cut(s)	882
SalI	GTCGAC	1 cut(s)	1433
SaqAI	TTAA	6 cut(s)	87, 143, 999, 1203, 1343, 1930
SatI	GCNGC	6 cut(s)	54, 218, 225, 1503, 1821, 1886
SchI	GAGTC	4 cut(s)	64, 307, 446, 721
ScrFI	CCNGG	9 cut(s)	36, 162, 574, 908, 909, 944, 1651, 1748, 1925
SduI	GDGCHC	4 cut(s)	882, 1089, 1517, 1657
SexAI	ACCWGGT	1 cut(s)	1923
SfaNI	GCATC	2 cut(s)	544, 1157
SfcI	CTRYAG	1 cut(s)	1503
SmaI	CCCGGG	1 cut(s)	909
SmiMI	CAYNNNNRTG	1 cut(s)	842
SmlI	CTYRAG	3 cut(s)	86, 1336, 1874
SmoI	CTYRAG	3 cut(s)	86, 1336, 1874
SpeI	ACTAGT	1 cut(s)	233
Sse9I	AATT	9 cut(s)	388, 1034, 1050, 1300, 1418, 1443, 1448, 1637, 1779
SsiI	CCGC	9 cut(s)	51, 65, 208, 524, 579, 666, 731, 774, 1789
SspMI	CTAG	5 cut(s)	234, 264, 275, 1017, 1722
SstI	GAGCTC	1 cut(s)	882
StyD4I	CCNGG	9 cut(s)	34, 160, 572, 906, 907, 942, 1649, 1746, 1923
StyI	CCWWGG	5 cut(s)	154, 263, 531, 963, 1265
TaaI	ACNGT	5 cut(s)	181, 1273, 1349, 1390, 1777
TaiI	ACGT	5 cut(s)	143, 980, 1008, 1110, 1614
TaqI	TCGA	7 cut(s)	296, 544, 1104, 1281, 1434, 1598, 1742
TaqII	GACCGA	3 cut(s)	103, 773, 1616
TasI	AATT	9 cut(s)	388, 1034, 1050, 1300, 1418, 1443, 1448, 1637, 1779
TatI	WGTACW	5 cut(s)	441, 615, 646, 705, 849
TfiI	GAWTC	5 cut(s)	505, 610, 635, 652, 741
Tru1I	TTAA	6 cut(s)	87, 143, 999, 1203, 1343, 1930
Tru9I	TTAA	6 cut(s)	87, 143, 999, 1203, 1343, 1930
TscAI	CASTG	3 cut(s)	186, 264, 1323
TseFI	GTSAC	4 cut(s)	100, 136, 761, 1612
TseI	GCWGC	6 cut(s)	53, 217, 224, 1502, 1820, 1885
Tsp45I	GTSAC	4 cut(s)	100, 136, 761, 1612
TspDTI	ATGAA	9 cut(s)	410, 497, 1221, 1566, 1650, 1773, 1871, 1891, 1895
TspGWI	ACGGA	6 cut(s)	512, 628, 767, 970, 1008, 1226
TspMI	CCCGGG	1 cut(s)	907
TspRI	CASTG	3 cut(s)	186, 264, 1323
Tth111I	GACNNNGTC	1 cut(s)	574
Vha464I	CTTAAG	1 cut(s)	86
VspI	ATTAAT	1 cut(s)	1203
XcmI	CCANNNNNNNNNTGG	1 cut(s)	387
XmaI	CCCGGG	1 cut(s)	907
XmaJI	CCTAGG	1 cut(s)	263
XmiI	GTMKAC	1 cut(s)	1434
XspI	CTAG	5 cut(s)	234, 264, 275, 1017, 1722
ZraI	GACGTC	2 cut(s)	1108, 1612
Zsp2I	ATGCAT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.