MD11G1223900.v1.1

zipper protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0016791
Physical Location & Seq
Reverse (-)
32789595 .. 32793013
3419 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1223900.v1.1.491

Sequence Viewer

Length: 1725 bp
ATGGACCTACCTCAACTCACTGTGCCGGCACCCCCTCAAGGCTCATCCCCACAAGCTGATCACCTCTCAAATTTTGGCTCACAGATGCTTCTTGCAAGCAACAGTATCCAAAGAGCCAGTGACCTACTCGTTTCAGTCTCACTAGGTGCTGAAATGAACAGAATCAAAACCACTGAGCTAGCTTCTCAAGCAATGGAAGAGCTGAAAAAACTGGCTTTGGCTAGAGAGCCTCTTTGGCAAGTTGACATAGAAAACAACACTGAAATACTGAGTGAGATCGAGTATACGAGGGAATTTGGGGATATCAGCACCACATTGATGGAGATAGTGAGAATGGTTGAGGTAAGAGAGTCTCCATCTCTGCCAAACTTGGACCTTAACAATTCTGAATATTCAGTAGGAAGTAATGAACATAAGCCAAGGGAACTTGGAGGACCAAAGCCTGCTAGTTTTGAAGCTTCACGAGAAATTGGTTTTGTCCAAATGAATCCCGCAAGCATTATTGAACTGCTAATGGATTTGGGGCAGTGGTCACAAGCATTTTCTACTATCGTCTCTAGGGCATCGATCATGGGAGTGTTGTCATCCACTGGAGTACAAGGAAACTATGATGGAACTCTTCAAGTGATGACAGCTGAATTTCAGGCCCCTGCACCTTTAATCCCAACTAGAGAAAGTTATTTTGCAAGGTATTGCAAAAATCTGGGCGACGGCATGTGGGGAGTTGTGGATGTTTCCTTGGAAAAATTGTTTCAACTTCCATCAAGAAACTTTCGAAGACAACCATCTGGTTGTTTGATTCAAGAGATGCCAAATGGATGGTCTCAGGTTATATGGGTAGAACATGTGGAGGTAGATAATACACTTGTTCATAATCTTTTTAAGCCGTTGGTCAGTTCTGGTTTTGCATTTTCCGCAAAACGTTGGGTTACCACTTTGATTGGACAACGTCAATGGCTGGAAACTTTAACGGCTACAAGAACTACTCTTGCAGCTGATGGAGCTGATGTTTCATCACAAGGAAGAAGAAGCCTATTGAAGCTTTCGGAGAGGATGGTAAGAAGTTTTTACATTGATAATATCTGCGGTTCTGCTGAGAACAAGTGGATGCCACTGCCATTGGGCTGGCCAATCTCTGGTGCTGAAAATGTAAGGATTTCAATGAAGAGTAGCACAGATGACCCTGGAAAGCCTCCAGGTAGCACAGTAGTGTTTACTACTTCCATAAATCTTCCTTTCCCTCGTAAACAAGTATTCAGTTTCCTTCGCGACGAGAAATGTCGAAATGAGTGGGATATGCTTGCATCAAACCATGGCTTCGATGAATATACATATTTTGCTAATGGCAAAACTCCAGGAAATCGTGTTTCCATATTGCGAGCCTTTAAGTCCAATGAGGTTGAAATATTCTACTTGCAAGCAAGTTATACTGACGCAACAGGCTCATACGTTGTTTATGCACCGATCGATATGTATGCCATGACAGAGCTCATAAATGGTGGAAACCCAGATAATTTGGCTATTTTGGCTTCAGGGTTTTCAATCCTTCCTGATAAGCCAAAGCACCGGGACGATACTGGCGGAAGTCTCTTGACAATTGCCTTCCACGTTGCTGCTGGAACTTCAACTCAAGAACATGTGTCTGCTCATCAACATGCCAATCTTATGTACTGTGTTCTTGCATCAACTGTTGTTTCAGTTGAGGATGGATTACAATCTACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
START

Protein Analysis

575

Amino Acids

63.34

Weight (kDa)

5.19

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
START PF01852 136 - 313 2.1e-32 START domain
PDF2_C PF25797 339 - 572 7.7e-62 PDF2-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g22020 FvH4_3g22021
malus_domestica MD11G1223900.v1.1
prunus_persica Prupe.4G205900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0037891
rosa_laevigata RLG00000033820
rosa_multiflora Rmu_sc0005416.1_g000025
rosa_roxburghii Rroxscaffold_1G00043030
rosa_rugosa Rorug05G0168500
rosa_samantha Rh5AG257100 Rh5BG259700 Rh5CG292700 Rh5DG269600
rosa_wichuraiana Rw5G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 28
AccB7I CCANNNNNTGG 1 cut(s) 1136
AccI GTMKAC 1 cut(s) 284
AccII CGCG 1 cut(s) 1269
AciI CCGC 4 cut(s) 492, 915, 1086, 1581
AclI AACGTT 1 cut(s) 922
AcoI YGGCCR 1 cut(s) 1127
AcsI RAATTY 3 cut(s) 70, 293, 638
AcuI CTGAAG 1 cut(s) 1515
AdeI CACNNNGTG 1 cut(s) 146
AfaI GTAC 2 cut(s) 597, 1670
AfiI CCNNNNNNNGG 2 cut(s) 38, 1136
AflIII ACRYGT 2 cut(s) 844, 1636
AjnI CCWGG 3 cut(s) 1183, 1195, 1354
AleI CACNNNNGTG 1 cut(s) 1208
Alw21I GWGCWC 1 cut(s) 1491
Alw26I GTCTC 5 cut(s) 142, 357, 559, 828, 1592
AoxI GGCC 2 cut(s) 645, 1127
ApeKI GCWGC 2 cut(s) 992, 1613
ApoI RAATTY 3 cut(s) 70, 293, 638
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
AspS9I GGNCC 4 cut(s) 4, 373, 434, 646
AsuC2I CCSGG 1 cut(s) 1568
AsuHPI GGTGA 1 cut(s) 53
AsuII TTCGAA 1 cut(s) 775
AsuNHI GCTAGC 1 cut(s) 178
AvaII GGWCC 3 cut(s) 4, 373, 434
BalI TGGCCA 1 cut(s) 1129
BanI GGYRCC 1 cut(s) 28
BanII GRGCYC 1 cut(s) 1491
BauI CACGAG 1 cut(s) 462
BbsI GAAGAC 1 cut(s) 784
Bbv12I GWGCWC 1 cut(s) 1491
BbvI GCAGC 2 cut(s) 1004, 1600
BccI CCATC 9 cut(s) 313, 364, 605, 769, 793, 813, 992, 1048, 1700
BceAI ACGGC 3 cut(s) 727, 871, 987
BcgI CGANNNNNNTGC 2 cut(s) 1457, 1491
BciT130I CCWGG 3 cut(s) 1185, 1197, 1356
BciVI GTATCC 1 cut(s) 116
BclI TGATCA 1 cut(s) 58
BcnI CCSGG 1 cut(s) 1568
BcoDI GTCTC 5 cut(s) 142, 357, 559, 828, 1592
BfaI CTAG 6 cut(s) 143, 179, 222, 447, 558, 669
BfuI GTATCC 1 cut(s) 116
BglI GCCNNNNNGGC 1 cut(s) 235
BisI GCNGC 2 cut(s) 993, 1614
BlsI GCNGC 2 cut(s) 994, 1615
Bme1390I CCNGG 4 cut(s) 1185, 1197, 1356, 1568
Bme18I GGWCC 3 cut(s) 4, 373, 434
BmgT120I GGNCC 4 cut(s) 4, 373, 434, 646
BmiI GGNNCC 2 cut(s) 30, 648
BmrFI CCNGG 4 cut(s) 1185, 1197, 1356, 1568
BmsI GCATC 6 cut(s) 75, 572, 798, 1098, 1313, 1691
BmtI GCTAGC 1 cut(s) 182
BpiI GAAGAC 1 cut(s) 784
BpmI CTGGAG 3 cut(s) 612, 1179, 1338
Bpu14I TTCGAA 1 cut(s) 775
BpuEI CTTGAG 3 cut(s) 21, 171, 1614
BpuMI CCSGG 1 cut(s) 1568
Bsa29I ATCGAT 2 cut(s) 566, 1467
BsaBI GATNNNNATC 1 cut(s) 1714
BsaI GGTCTC 1 cut(s) 828
BsaJI CCNNGG 4 cut(s) 419, 738, 1183, 1312
BsaXI ACNNNNNCTCC 2 cut(s) 993, 1023
Bsc4I CCNNNNNNNGG 2 cut(s) 38, 1136
Bse118I RCCGGY 1 cut(s) 25
Bse1I ACTGG 4 cut(s) 117, 216, 595, 1582
Bse3DI GCAATG 1 cut(s) 198
Bse8I GATNNNNATC 1 cut(s) 1714
BseBI CCWGG 3 cut(s) 1185, 1197, 1356
BseCI ATCGAT 2 cut(s) 566, 1467
BseDI CCNNGG 4 cut(s) 419, 738, 1183, 1312
BseGI GGATG 7 cut(s) 44, 584, 736, 824, 1059, 1113, 1711
BseJI GATNNNNATC 1 cut(s) 1714
BseLI CCNNNNNNNGG 2 cut(s) 38, 1136
BseMI GCAATG 1 cut(s) 198
BseMII CTCAG 4 cut(s) 165, 260, 839, 1086
BseNI ACTGG 4 cut(s) 117, 216, 595, 1582
BseXI GCAGC 2 cut(s) 1004, 1600
BsgI GTGCAG 1 cut(s) 636
Bsh1236I CGCG 1 cut(s) 1269
Bsh1285I CGRYCG 1 cut(s) 1467
BshFI GGCC 2 cut(s) 647, 1129
BshNI GGYRCC 1 cut(s) 28
BshVI ATCGAT 2 cut(s) 566, 1467
BsiEI CGRYCG 1 cut(s) 1467
BsiHKAI GWGCWC 1 cut(s) 1491
BsiSI CCGG 2 cut(s) 26, 1567
BslFI GGGAC 1 cut(s) 1583
BslI CCNNNNNNNGG 2 cut(s) 38, 1136
BsmAI GTCTC 5 cut(s) 142, 357, 559, 828, 1592
BsmBI CGTCTC 1 cut(s) 559
BsmFI GGGAC 1 cut(s) 1583
BsnI GGCC 2 cut(s) 647, 1129
Bso31I GGTCTC 1 cut(s) 828
Bsp119I TTCGAA 1 cut(s) 775
Bsp1286I GDGCHC 1 cut(s) 1491
Bsp143I GATC 4 cut(s) 58, 276, 567, 1464
Bsp19I CCATGG 1 cut(s) 1312
Bsp68I TCGCGA 1 cut(s) 1269
BspACI CCGC 4 cut(s) 492, 915, 1086, 1581
BspANI GGCC 2 cut(s) 647, 1129
BspCNI CTCAG 4 cut(s) 166, 261, 838, 1087
BspDI ATCGAT 2 cut(s) 566, 1467
BspFNI CGCG 1 cut(s) 1269
BspLI GGNNCC 2 cut(s) 30, 648
BspOI GCTAGC 1 cut(s) 182
BspQI GCTCTTC 1 cut(s) 192
BspT104I TTCGAA 1 cut(s) 775
BspT107I GGYRCC 1 cut(s) 28
BspTNI GGTCTC 1 cut(s) 828
BsrDI GCAATG 1 cut(s) 198
BsrFI RCCGGY 1 cut(s) 25
BsrI ACTGG 4 cut(s) 117, 216, 595, 1582
BssAI RCCGGY 1 cut(s) 25
BssECI CCNNGG 4 cut(s) 419, 738, 1183, 1312
BssMI GATC 4 cut(s) 58, 276, 567, 1464
BssNAI GTATAC 1 cut(s) 285
BssSI CACGAG 1 cut(s) 462
BssT1I CCWWGG 3 cut(s) 419, 738, 1312
Bst1107I GTATAC 1 cut(s) 285
Bst2BI CACGAG 1 cut(s) 462
Bst2UI CCWGG 3 cut(s) 1185, 1197, 1356
Bst4CI ACNGT 5 cut(s) 22, 104, 1207, 1673, 1690
Bst6I CTCTTC 3 cut(s) 192, 624, 1160
BstBI TTCGAA 1 cut(s) 775
BstC8I GCNNGC 9 cut(s) 27, 97, 180, 444, 496, 1127, 1302, 1380, 1419
BstDEI CTNAG 4 cut(s) 174, 269, 825, 1095
BstDSI CCRYGG 1 cut(s) 1312
BstEII GGTNACC 1 cut(s) 928
BstF5I GGATG 7 cut(s) 44, 584, 736, 824, 1059, 1113, 1711
BstFNI CGCG 1 cut(s) 1269
BstKTI GATC 4 cut(s) 61, 279, 570, 1467
BstMAI GTCTC 5 cut(s) 142, 357, 559, 828, 1592
BstMBI GATC 4 cut(s) 58, 276, 567, 1464
BstMCI CGRYCG 1 cut(s) 1467
BstMWI GCNNNNNNNGC 5 cut(s) 188, 235, 914, 1001, 1526
BstNI CCWGG 3 cut(s) 1185, 1197, 1356
BstNSI RCATGY 4 cut(s) 718, 848, 1640, 1658
BstPI GGTNACC 1 cut(s) 928
BstSCI CCNGG 4 cut(s) 1183, 1195, 1354, 1566
BstUI CGCG 1 cut(s) 1269
BstV1I GCAGC 2 cut(s) 1004, 1600
BstV2I GAAGAC 1 cut(s) 784
BstXI CCANNNNNNTGG 3 cut(s) 319, 819, 1125
BstZ17I GTATAC 1 cut(s) 285
Bsu15I ATCGAT 2 cut(s) 566, 1467
BsuI GTATCC 1 cut(s) 116
BsuRI GGCC 2 cut(s) 647, 1129
BsuTUI ATCGAT 2 cut(s) 566, 1467
BtgI CCRYGG 1 cut(s) 1312
BtsCI GGATG 7 cut(s) 44, 584, 736, 824, 1059, 1113, 1711
BtsI GCAGTG 2 cut(s) 533, 1112
BtsIMutI CAGTG 7 cut(s) 18, 124, 171, 258, 533, 588, 1112
BtuMI TCGCGA 1 cut(s) 1269
Cac8I GCNNGC 9 cut(s) 27, 97, 180, 444, 496, 1127, 1302, 1380, 1419
Cfr10I RCCGGY 1 cut(s) 25
Cfr13I GGNCC 4 cut(s) 4, 373, 434, 646
ClaI ATCGAT 2 cut(s) 566, 1467
CseI GACGC 1 cut(s) 1442
Csp6I GTAC 2 cut(s) 596, 1669
CspCI CAANNNNNGTGG 4 cut(s) 922, 957, 1101, 1136
CviAII CATG 7 cut(s) 571, 715, 845, 1313, 1480, 1637, 1655
CviQI GTAC 2 cut(s) 596, 1669
DdeI CTNAG 4 cut(s) 174, 269, 825, 1095
DpnI GATC 4 cut(s) 60, 278, 569, 1466
DpnII GATC 4 cut(s) 58, 276, 567, 1464
DraIII CACNNNGTG 1 cut(s) 146
EaeI YGGCCR 1 cut(s) 1127
Eam1104I CTCTTC 3 cut(s) 192, 624, 1160
EarI CTCTTC 3 cut(s) 192, 624, 1160
EciI GGCGGA 1 cut(s) 1596
Ecl136II GAGCTC 1 cut(s) 1489
Eco130I CCWWGG 3 cut(s) 419, 738, 1312
Eco24I GRGCYC 1 cut(s) 1491
Eco31I GGTCTC 1 cut(s) 828
Eco32I GATATC 1 cut(s) 304
Eco47I GGWCC 3 cut(s) 4, 373, 434
Eco53kI GAGCTC 1 cut(s) 1489
Eco57I CTGAAG 1 cut(s) 1515
Eco91I GGTNACC 1 cut(s) 928
EcoICRI GAGCTC 1 cut(s) 1489
EcoO109I RGGNCCY 1 cut(s) 646
EcoO65I GGTNACC 1 cut(s) 928
EcoRII CCWGG 3 cut(s) 1183, 1195, 1354
EcoRV GATATC 1 cut(s) 304
EcoT14I CCWWGG 3 cut(s) 419, 738, 1312
EcoT38I GRGCYC 1 cut(s) 1491
ErhI CCWWGG 3 cut(s) 419, 738, 1312
Esp3I CGTCTC 1 cut(s) 559
FaeI CATG 7 cut(s) 574, 718, 848, 1316, 1483, 1640, 1658
FaqI GGGAC 1 cut(s) 1583
FatI CATG 7 cut(s) 570, 714, 844, 1312, 1479, 1636, 1654
FauI CCCGC 1 cut(s) 499
FbaI TGATCA 1 cut(s) 58
FblI GTMKAC 1 cut(s) 284
Fnu4HI GCNGC 2 cut(s) 993, 1614
FokI GGATG 7 cut(s) 31, 571, 743, 831, 1066, 1120, 1718
FriOI GRGCYC 1 cut(s) 1491
Fsp4HI GCNGC 2 cut(s) 993, 1614
FspBI CTAG 6 cut(s) 143, 179, 222, 447, 558, 669
GluI GCNGC 2 cut(s) 993, 1614
GsuI CTGGAG 3 cut(s) 612, 1179, 1338
HaeIII GGCC 2 cut(s) 647, 1129
HapII CCGG 2 cut(s) 26, 1567
HgaI GACGC 1 cut(s) 1442
Hin1II CATG 7 cut(s) 574, 718, 848, 1316, 1483, 1640, 1658
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HindIII AAGCTT 2 cut(s) 456, 1040
HinfI GANTC 4 cut(s) 162, 350, 487, 799
HpaII CCGG 2 cut(s) 26, 1567
HphI GGTGA 1 cut(s) 53
Hpy166II GTNNAC 4 cut(s) 244, 285, 1215, 1247
Hpy188I TCNGA 2 cut(s) 388, 1048
Hpy188III TCNNGA 7 cut(s) 462, 765, 803, 1268, 1550, 1591, 1631
Hpy8I GTNNAC 4 cut(s) 244, 285, 1215, 1247
Hpy99I CGWCG 2 cut(s) 713, 1274
HpyAV CCTTC 3 cut(s) 1274, 1556, 1612
HpyCH4III ACNGT 5 cut(s) 22, 104, 1207, 1673, 1690
HpyCH4IV ACGT 4 cut(s) 922, 949, 1449, 1608
HpyF10VI GCNNNNNNNGC 5 cut(s) 188, 235, 914, 1001, 1526
HpyF3I CTNAG 4 cut(s) 174, 269, 825, 1095
HpySE526I ACGT 4 cut(s) 922, 949, 1449, 1608
Hsp92II CATG 7 cut(s) 574, 718, 848, 1316, 1483, 1640, 1658
KroI GCCGGC 1 cut(s) 25
KroNI GCCGGC 1 cut(s) 27
Ksp22I TGATCA 1 cut(s) 58
Kzo9I GATC 4 cut(s) 58, 276, 567, 1464
LguI GCTCTTC 1 cut(s) 192
LmnI GCTCC 1 cut(s) 1001
Lsp1109I GCAGC 2 cut(s) 1004, 1600
LweI GCATC 6 cut(s) 75, 572, 798, 1098, 1313, 1691
MaeI CTAG 6 cut(s) 143, 179, 222, 447, 558, 669
MaeII ACGT 4 cut(s) 922, 949, 1449, 1608
MaeIII GTNAC 3 cut(s) 119, 531, 928
MalI GATC 4 cut(s) 60, 278, 569, 1466
MboI GATC 4 cut(s) 58, 276, 567, 1464
MboII GAAGA 7 cut(s) 209, 611, 789, 1035, 1038, 1177, 1223
MfeI CAATTG 1 cut(s) 1596
MhlI GDGCHC 1 cut(s) 1491
MlsI TGGCCA 1 cut(s) 1129
MluCI AATT 8 cut(s) 70, 293, 382, 468, 638, 746, 1513, 1596
MluNI TGGCCA 1 cut(s) 1129
MlyI GAGTC 1 cut(s) 359
Mox20I TGGCCA 1 cut(s) 1129
MroNI GCCGGC 1 cut(s) 25
MscI TGGCCA 1 cut(s) 1129
MseI TTAA 5 cut(s) 378, 659, 882, 968, 1386
MslI CAYNNNNRTG 4 cut(s) 317, 575, 1208, 1653
Msp20I TGGCCA 1 cut(s) 1129
MspA1I CMGCKG 2 cut(s) 635, 995
MspI CCGG 2 cut(s) 26, 1567
MspR9I CCNGG 4 cut(s) 1185, 1197, 1356, 1568
MunI CAATTG 1 cut(s) 1596
MvaI CCWGG 3 cut(s) 1185, 1197, 1356
MvnI CGCG 1 cut(s) 1269
MwoI GCNNNNNNNGC 5 cut(s) 188, 235, 914, 1001, 1526
NaeI GCCGGC 1 cut(s) 27
NciI CCSGG 1 cut(s) 1568
NcoI CCATGG 1 cut(s) 1312
NdeII GATC 4 cut(s) 58, 276, 567, 1464
NgoMIV GCCGGC 1 cut(s) 25
NheI GCTAGC 1 cut(s) 178
NlaIII CATG 7 cut(s) 574, 718, 848, 1316, 1483, 1640, 1658
NlaIV GGNNCC 2 cut(s) 30, 648
NmuCI GTSAC 2 cut(s) 119, 531
NruI TCGCGA 1 cut(s) 1269
NspI RCATGY 4 cut(s) 718, 848, 1640, 1658
NspV TTCGAA 1 cut(s) 775
OliI CACNNNNGTG 1 cut(s) 1208
PciI ACATGT 2 cut(s) 844, 1636
PciSI GCTCTTC 1 cut(s) 192
PdiI GCCGGC 1 cut(s) 27
PfeI GAWTC 3 cut(s) 162, 487, 799
PflFI GACNNNGTC 1 cut(s) 948
PflMI CCANNNNNTGG 1 cut(s) 1136
PfoI TCCNGGA 1 cut(s) 1354
PkrI GCNGC 2 cut(s) 994, 1615
Ple19I CGATCG 1 cut(s) 1467
PleI GAGTC 1 cut(s) 358
PpsI GAGTC 1 cut(s) 358
PscI ACATGT 2 cut(s) 844, 1636
Psp124BI GAGCTC 1 cut(s) 1491
Psp1406I AACGTT 1 cut(s) 922
Psp6I CCWGG 3 cut(s) 1183, 1195, 1354
PspEI GGTNACC 1 cut(s) 928
PspGI CCWGG 3 cut(s) 1183, 1195, 1354
PspN4I GGNNCC 2 cut(s) 30, 648
PspPI GGNCC 4 cut(s) 4, 373, 434, 646
PsyI GACNNNGTC 1 cut(s) 948
PvuI CGATCG 1 cut(s) 1467
PvuII CAGCTG 2 cut(s) 635, 995
RruI TCGCGA 1 cut(s) 1269
RsaI GTAC 2 cut(s) 597, 1670
RsaNI GTAC 2 cut(s) 596, 1669
RseI CAYNNNNRTG 4 cut(s) 317, 575, 1208, 1653
SacI GAGCTC 1 cut(s) 1491
SapI GCTCTTC 1 cut(s) 192
SaqAI TTAA 5 cut(s) 378, 659, 882, 968, 1386
SatI GCNGC 2 cut(s) 993, 1614
Sau3AI GATC 4 cut(s) 58, 276, 567, 1464
Sau96I GGNCC 4 cut(s) 4, 373, 434, 646
SchI GAGTC 1 cut(s) 359
ScrFI CCNGG 4 cut(s) 1185, 1197, 1356, 1568
SduI GDGCHC 1 cut(s) 1491
SfaNI GCATC 6 cut(s) 75, 572, 798, 1098, 1313, 1691
SfuI TTCGAA 1 cut(s) 775
SinI GGWCC 3 cut(s) 4, 373, 434
SmiMI CAYNNNNRTG 4 cut(s) 317, 575, 1208, 1653
SmlI CTYRAG 3 cut(s) 36, 186, 1629
SmoI CTYRAG 3 cut(s) 36, 186, 1629
Sse9I AATT 8 cut(s) 70, 293, 382, 468, 638, 746, 1513, 1596
SsiI CCGC 4 cut(s) 492, 915, 1086, 1581
SspI AATATT 2 cut(s) 392, 1407
SspMI CTAG 6 cut(s) 143, 179, 222, 447, 558, 669
SstI GAGCTC 1 cut(s) 1491
StyD4I CCNGG 4 cut(s) 1183, 1195, 1354, 1566
StyI CCWWGG 3 cut(s) 419, 738, 1312
TaaI ACNGT 5 cut(s) 22, 104, 1207, 1673, 1690
TaiI ACGT 4 cut(s) 925, 952, 1452, 1611
TaqI TCGA 6 cut(s) 279, 566, 775, 1282, 1320, 1467
TasI AATT 8 cut(s) 70, 293, 382, 468, 638, 746, 1513, 1596
TatI WGTACW 2 cut(s) 595, 1668
TfiI GAWTC 3 cut(s) 162, 487, 799
Tru1I TTAA 5 cut(s) 378, 659, 882, 968, 1386
Tru9I TTAA 5 cut(s) 378, 659, 882, 968, 1386
TscAI CASTG 7 cut(s) 25, 124, 178, 265, 533, 595, 1119
TseFI GTSAC 2 cut(s) 119, 531
TseI GCWGC 2 cut(s) 992, 1613
Tsp45I GTSAC 2 cut(s) 119, 531
TspDTI ATGAA 7 cut(s) 170, 423, 500, 860, 1002, 1178, 1338
TspRI CASTG 7 cut(s) 25, 124, 178, 265, 533, 595, 1119
Tth111I GACNNNGTC 1 cut(s) 948
Van91I CCANNNNNTGG 1 cut(s) 1136
VpaK11BI GGWCC 3 cut(s) 4, 373, 434
XapI RAATTY 3 cut(s) 70, 293, 638
XceI RCATGY 4 cut(s) 718, 848, 1640, 1658
XcmI CCANNNNNNNNNTGG 1 cut(s) 1613
XmiI GTMKAC 1 cut(s) 284
XspI CTAG 6 cut(s) 143, 179, 222, 447, 558, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.