Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0016052

Physical Location & Seq

Genomic Coordinates Reverse (-)

5202290 .. 5205217

Gene Structure 2928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1046300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGCTTAGCTGCAAAACGCTATTGTCCCAAAGGACCAAATCCATCAGGAAGAAGAAGAAAACCAAATCCAAAAACAAGAAAACAACCAAATCTGTATCCACAAAACAAAACCCCATTTCCAAAAACTACCAAGAATTAGAGGAAGAAGAAGAAGATGAAGATTTTGAACAAGGTTTCAATCTCAAGGCCTCAGCTCCATCGAGCTCCCATGGAGTTCAGCCACTGGGAAATCTCTACCTCAGCCCAGGTTCTGTCAACTCAAGGAACACTGGATTAGGTAATCTCCAAACCCTAACAGATGAACTTGTTCTTGAGATTTTGGGGCTTTTGGGTGGGACCCACTTGGGGGTTTTGGCCACTGTAAGCAAATCTTTCTATGTTTTTGCAAATCATGAGCCCCTCTGGAGGAACCTTGTGTTGGATGATCTAAAGGGTGGGCTTTTGTATAATGGGTCTTGGAAATCTACTTACATTGCTGCTCATTGCCCTTCTTTTGATGTGTCAAGTATCCGTGTTTCGGGTTTGAGAGTTAGGGACTTTTATTCTGACTATCTCTTCCAGAGCTGGCTTTGTGCCAATCTTGAGATGAAACCCGAGTGGCTTGAAAGGGATAATATAATCAGGAGAAGGGGCATTTCGGTTGAGGAGTTCATTTCGGTTTTTGAGGAACCGAATAAACCGGTGCTGTTGGAAGGGTGTATGGATAACTGGGTTGCATTGGAGAAATGGGATAGGGATTATTTAGTTCATTTGTGTGGTGATGTTCAATTTTCGGTTGGGCCAGTGGAGATGAAGCTTGGGGACTATTTTCGGTATGCTGATCAGGCGAGGGAAGAGAGGCCGCTGTATTTATTTGACCCAAAATTTGGAGAAAAAGTAGGAACTTTGGGTTCTGAGTATGAAGTTCCGGTTTACTTTAGGGAGGACTTATTTGGTGTTTTGGGCATTGAGAGGCCAGATTATAGATGGATAATAATTGGACCAGCTGGGTCAGGTTCATCATTCCACATTGATCCTAATTCGACTTCAGCTTGGAATGCAGTGATCACGGGGTCAAAGAAGTGGGTGTTGTTTCCTCCTGATGTGGTTCCTCCCGGGGTGCATCCCAGTCCAGATGGAGCTGAGGTGGCATGTCCTGTTTCAATAATTGAATGGTTCATGAACTTCTATGGTGCAACAAAGACTTGGAAGAAGAAACCCATTGAATGCATTTGTAAGGCTGGGGAGGTGATTTTTGTACCTCGTGGATGGTGGCATTTGGTGATCAACTTGGAGGAATCAATTGCCATTACACAGAATTATGTTAGCAGGAGAAATTTGTTGGACGTCTTGGATTTTCTTAAGAGGCCAAATGCCAGCACTCTGGTATCCGGAACCAGAGATCGAGTGAATTTGTATGACAAGTTTAAAAATGCCATTGAGGCTTCTTTTCCTGGAACTATTGATCACCTGACTCGGAAAGCAGAGGAGAAGAATGCCCAGCAGAAAAAACCATCCTTCTGGGATTCAGTTACGGATTCAAAGGCGGGTGCTTTCAAGTTCTCTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0010029 GO:0010030 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018193 GO:0018195 GO:0018216 GO:0019538 GO:0032259 GO:0034969 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0043985 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0051276 GO:0065007 GO:0071704 GO:0071840 GO:0097159 GO:1900140 GO:1901363 GO:1901564 GO:1990837 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_8 F-box F-box-like

Protein Analysis

517

Amino Acids

58.43

Weight (kDa)

6.78

Isoelectric Point (pI)

45.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	100 - 140	7.6e-06	F-box-like
Cupin_8	PF13621	219 - 434	2.7e-19	Cupin-like domain
JmjC	PF02373	323 - 433	4.7e-12	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06550
fragaria_vesca	FvH4_6g21050 FvH4_6g21050
malus_domestica	MD12G1046300.v1.1
prunus_persica	Prupe.7G089800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0477431
rosa_laevigata	RLG00000023722
rosa_roxburghii	Rroxscaffold_6G00404160 Rroxscaffold_6G00404640
rosa_rugosa	Rorug03G0160700
rosa_samantha	Rh3AG211000 Rh3BG244400 Rh3CG238200 Rh3DG237900
rosa_wichuraiana	Rw3G019120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1329
AccB7I	CCANNNNNTGG	1 cut(s)	866
AccIII	TCCGGA	1 cut(s)	1370
AciI	CCGC	2 cut(s)	842, 1526
AclWI	GGATC	1 cut(s)	1007
AcoI	YGGCCR	1 cut(s)	354
AcsI	RAATTY	3 cut(s)	863, 1315, 1390
AcuI	CTGAAG	1 cut(s)	1011
AcyI	GRCGYC	1 cut(s)	1326
AfaI	GTAC	1 cut(s)	1239
AfiI	CCNNNNNNNGG	6 cut(s)	345, 346, 405, 418, 517, 866
AflII	CTTAAG	1 cut(s)	1340
AgeI	ACCGGT	1 cut(s)	679
AgsI	TTSAA	9 cut(s)	167, 178, 605, 767, 1143, 1151, 1205, 1521, 1537
AjnI	CCWGG	2 cut(s)	244, 1432
AjuI	GAANNNNNNNTTGG	2 cut(s)	401, 433
AluBI	AGCT	8 cut(s)	9, 194, 204, 564, 796, 986, 1031, 1121
AluI	AGCT	8 cut(s)	9, 194, 204, 564, 796, 986, 1031, 1121
Alw21I	GWGCWC	1 cut(s)	206
AlwI	GGATC	1 cut(s)	1007
AlwNI	CAGNNNCTG	2 cut(s)	223, 251
Ama87I	CYCGRG	2 cut(s)	593, 1094
Aor13HI	TCCGGA	1 cut(s)	1370
AoxI	GGCC	6 cut(s)	186, 354, 779, 839, 953, 1346
ApeKI	GCWGC	2 cut(s)	9, 476
ApoI	RAATTY	3 cut(s)	863, 1315, 1390
ArsI	GACNNNNNNTTYG	2 cut(s)	848, 880
AsiGI	ACCGGT	1 cut(s)	679
Asp700I	GAANNNNTTC	1 cut(s)	306
AspS9I	GGNCC	4 cut(s)	33, 336, 779, 980
AsuC2I	CCSGG	2 cut(s)	1095, 1096
AsuHPI	GGTGA	4 cut(s)	770, 1240, 1273, 1439
AvaI	CYCGRG	2 cut(s)	593, 1094
AvaII	GGWCC	3 cut(s)	33, 336, 980
BaeI	ACNNNNGTAYC	2 cut(s)	1350, 1383
BalI	TGGCCA	1 cut(s)	356
BanII	GRGCYC	2 cut(s)	206, 399
BauI	CACGAG	1 cut(s)	1242
Bbv12I	GWGCWC	1 cut(s)	206
BbvCI	CCTCAGC	3 cut(s)	190, 239, 1122
BbvI	GCAGC	1 cut(s)	463
BccI	CCATC	6 cut(s)	50, 205, 960, 1109, 1242, 1501
BciT130I	CCWGG	2 cut(s)	246, 1434
BciVI	GTATCC	3 cut(s)	106, 518, 1378
BclI	TGATCA	4 cut(s)	820, 1044, 1263, 1444
BcnI	CCSGG	2 cut(s)	1095, 1096
BfaI	CTAG	1 cut(s)	1549
BfrI	CTTAAG	1 cut(s)	1340
BfuI	GTATCC	3 cut(s)	106, 518, 1378
BglI	GCCNNNNNGGC	1 cut(s)	1421
BisI	GCNGC	3 cut(s)	10, 477, 842
BlpI	GCTNAGC	1 cut(s)	5
BlsI	GCNGC	3 cut(s)	11, 478, 843
Bme1390I	CCNGG	4 cut(s)	246, 1095, 1096, 1434
Bme18I	GGWCC	3 cut(s)	33, 336, 980
BmeT110I	CYCGRG	2 cut(s)	593, 1094
BmgT120I	GGNCC	4 cut(s)	33, 336, 779, 980
BmiI	GGNNCC	6 cut(s)	337, 338, 410, 669, 1089, 1375
BmrFI	CCNGG	4 cut(s)	246, 1095, 1096, 1434
BmrI	ACTGGG	3 cut(s)	233, 718, 1101
BmsI	GCATC	1 cut(s)	1111
BmuI	ACTGGG	3 cut(s)	233, 718, 1101
BpmI	CTGGAG	1 cut(s)	424
Bpu10I	CCTNAGC	3 cut(s)	190, 239, 1122
Bpu1102I	GCTNAGC	1 cut(s)	5
BpuEI	CTTGAG	4 cut(s)	167, 244, 332, 602
BpuMI	CCSGG	2 cut(s)	1095, 1096
BsaHI	GRCGYC	1 cut(s)	1326
BsaJI	CCNNGG	4 cut(s)	208, 244, 1094, 1095
BsaWI	WCCGGW	3 cut(s)	679, 907, 1370
BsaXI	ACNNNNNCTCC	4 cut(s)	861, 891, 1110, 1140
Bsc4I	CCNNNNNNNGG	6 cut(s)	345, 346, 405, 418, 517, 866
Bse118I	RCCGGY	1 cut(s)	679
Bse1I	ACTGG	5 cut(s)	228, 274, 713, 782, 1107
Bse3DI	GCAATG	2 cut(s)	471, 481
BseAI	TCCGGA	1 cut(s)	1370
BseBI	CCWGG	2 cut(s)	246, 1434
BseDI	CCNNGG	4 cut(s)	208, 244, 1094, 1095
BseGI	GGATG	4 cut(s)	427, 1102, 1253, 1493
BseLI	CCNNNNNNNGG	6 cut(s)	345, 346, 405, 418, 517, 866
BseMI	GCAATG	2 cut(s)	471, 481
BseMII	CTCAG	4 cut(s)	204, 253, 885, 1113
BseNI	ACTGG	5 cut(s)	228, 274, 713, 782, 1107
BseRI	GAGGAG	2 cut(s)	659, 1481
BseXI	GCAGC	1 cut(s)	463
BseYI	CCCAGC	3 cut(s)	986, 1220, 1479
BshFI	GGCC	6 cut(s)	188, 356, 781, 841, 955, 1348
BshTI	ACCGGT	1 cut(s)	679
BsiHKAI	GWGCWC	1 cut(s)	206
BsiHKCI	CYCGRG	2 cut(s)	593, 1094
BsiSI	CCGG	4 cut(s)	680, 908, 1095, 1371
BslFI	GGGAC	4 cut(s)	10, 349, 548, 815
BslI	CCNNNNNNNGG	6 cut(s)	345, 346, 405, 418, 517, 866
BsmFI	GGGAC	4 cut(s)	10, 349, 548, 815
BsmI	GAATGC	3 cut(s)	1042, 1211, 1480
BsnI	GGCC	6 cut(s)	188, 356, 781, 841, 955, 1348
BsoBI	CYCGRG	2 cut(s)	593, 1094
Bsp1286I	GDGCHC	2 cut(s)	206, 399
Bsp13I	TCCGGA	1 cut(s)	1370
Bsp143I	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
Bsp1720I	GCTNAGC	1 cut(s)	5
Bsp19I	CCATGG	1 cut(s)	208
BspACI	CCGC	2 cut(s)	842, 1526
BspANI	GGCC	6 cut(s)	188, 356, 781, 841, 955, 1348
BspCNI	CTCAG	4 cut(s)	203, 252, 886, 1114
BspEI	TCCGGA	1 cut(s)	1370
BspHI	TCATGA	2 cut(s)	391, 1158
BspLI	GGNNCC	6 cut(s)	337, 338, 410, 669, 1089, 1375
BspPI	GGATC	1 cut(s)	1007
BspTI	CTTAAG	1 cut(s)	1340
BsrDI	GCAATG	2 cut(s)	471, 481
BsrFI	RCCGGY	1 cut(s)	679
BsrI	ACTGG	5 cut(s)	228, 274, 713, 782, 1107
BssAI	RCCGGY	1 cut(s)	679
BssECI	CCNNGG	4 cut(s)	208, 244, 1094, 1095
BssMI	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
BssNI	GRCGYC	1 cut(s)	1326
BssSI	CACGAG	1 cut(s)	1242
BssT1I	CCWWGG	1 cut(s)	208
Bst2BI	CACGAG	1 cut(s)	1242
Bst2UI	CCWGG	2 cut(s)	246, 1434
Bst4CI	ACNGT	1 cut(s)	361
Bst6I	CTCTTC	2 cut(s)	560, 828
BstACI	GRCGYC	1 cut(s)	1326
BstAFI	CTTAAG	1 cut(s)	1340
BstC8I	GCNNGC	2 cut(s)	566, 1357
BstDEI	CTNAG	5 cut(s)	5, 190, 239, 894, 1122
BstDSI	CCRYGG	1 cut(s)	208
BstF5I	GGATG	4 cut(s)	427, 1102, 1253, 1493
BstKTI	GATC	7 cut(s)	427, 823, 1015, 1047, 1266, 1384, 1447
BstMBI	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
BstMWI	GCNNNNNNNGC	4 cut(s)	824, 1037, 1127, 1421
BstNI	CCWGG	2 cut(s)	246, 1434
BstNSI	RCATGY	1 cut(s)	1134
BstSCI	CCNGG	4 cut(s)	244, 1093, 1094, 1432
BstV1I	GCAGC	1 cut(s)	463
BstXI	CCANNNNNNTGG	2 cut(s)	1363, 1500
BsuI	GTATCC	3 cut(s)	106, 518, 1378
BsuRI	GGCC	6 cut(s)	188, 356, 781, 841, 955, 1348
BtgI	CCRYGG	1 cut(s)	208
BtsCI	GGATG	4 cut(s)	427, 1102, 1253, 1493
BtsI	GCAGTG	1 cut(s)	1047
BtsIMutI	CAGTG	5 cut(s)	221, 267, 357, 789, 1047
Cac8I	GCNNGC	2 cut(s)	566, 1357
CaiI	CAGNNNCTG	2 cut(s)	223, 251
CciI	TCATGA	2 cut(s)	391, 1158
Cfr10I	RCCGGY	1 cut(s)	679
Cfr13I	GGNCC	4 cut(s)	33, 336, 779, 980
Cfr9I	CCCGGG	1 cut(s)	1094
Csp6I	GTAC	1 cut(s)	1238
CspAI	ACCGGT	1 cut(s)	679
CviAII	CATG	4 cut(s)	209, 392, 1131, 1159
CviQI	GTAC	1 cut(s)	1238
DdeI	CTNAG	5 cut(s)	5, 190, 239, 894, 1122
DpnI	GATC	7 cut(s)	426, 822, 1014, 1046, 1265, 1383, 1446
DpnII	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
DraI	TTTAAA	1 cut(s)	1408
EaeI	YGGCCR	1 cut(s)	354
Eam1104I	CTCTTC	2 cut(s)	560, 828
EarI	CTCTTC	2 cut(s)	560, 828
Ecl136II	GAGCTC	1 cut(s)	204
Eco130I	CCWWGG	1 cut(s)	208
Eco147I	AGGCCT	1 cut(s)	188
Eco24I	GRGCYC	2 cut(s)	206, 399
Eco47I	GGWCC	3 cut(s)	33, 336, 980
Eco53kI	GAGCTC	1 cut(s)	204
Eco57I	CTGAAG	1 cut(s)	1011
Eco88I	CYCGRG	2 cut(s)	593, 1094
EcoICRI	GAGCTC	1 cut(s)	204
EcoO109I	RGGNCCY	1 cut(s)	336
EcoRII	CCWGG	2 cut(s)	244, 1432
EcoT14I	CCWWGG	1 cut(s)	208
EcoT22I	ATGCAT	1 cut(s)	1211
EcoT38I	GRGCYC	2 cut(s)	206, 399
ErhI	CCWWGG	1 cut(s)	208
FaeI	CATG	4 cut(s)	212, 395, 1134, 1162
FalI	AAGNNNNNCTT	2 cut(s)	355, 387
FaqI	GGGAC	4 cut(s)	10, 349, 548, 815
FatI	CATG	4 cut(s)	208, 391, 1130, 1158
FauI	CCCGC	1 cut(s)	1519
FbaI	TGATCA	4 cut(s)	820, 1044, 1263, 1444
Fnu4HI	GCNGC	3 cut(s)	10, 477, 842
FokI	GGATG	4 cut(s)	434, 1089, 1260, 1480
FriOI	GRGCYC	2 cut(s)	206, 399
Fsp4HI	GCNGC	3 cut(s)	10, 477, 842
FspBI	CTAG	1 cut(s)	1549
GluI	GCNGC	3 cut(s)	10, 477, 842
GsaI	CCCAGC	3 cut(s)	990, 1224, 1483
GsuI	CTGGAG	1 cut(s)	424
HaeIII	GGCC	6 cut(s)	188, 356, 781, 841, 955, 1348
HapII	CCGG	4 cut(s)	680, 908, 1095, 1371
Hin1I	GRCGYC	1 cut(s)	1326
Hin1II	CATG	4 cut(s)	212, 395, 1134, 1162
HincII	GTYRAC	1 cut(s)	256
HindII	GTYRAC	1 cut(s)	256
HindIII	AAGCTT	1 cut(s)	794
HinfI	GANTC	4 cut(s)	1277, 1453, 1505, 1517
HpaII	CCGG	4 cut(s)	680, 908, 1095, 1371
HphI	GGTGA	4 cut(s)	770, 1240, 1273, 1439
Hpy166II	GTNNAC	2 cut(s)	256, 913
Hpy188I	TCNGA	3 cut(s)	547, 895, 1458
Hpy8I	GTNNAC	2 cut(s)	256, 913
HpyAV	CCTTC	4 cut(s)	498, 621, 686, 1507
HpyCH4III	ACNGT	1 cut(s)	361
HpyCH4IV	ACGT	1 cut(s)	1326
HpyCH4V	TGCA	7 cut(s)	12, 386, 716, 1040, 1102, 1175, 1209
HpyF10VI	GCNNNNNNNGC	4 cut(s)	824, 1037, 1127, 1421
HpyF3I	CTNAG	5 cut(s)	5, 190, 239, 894, 1122
HpySE526I	ACGT	1 cut(s)	1326
Hsp92I	GRCGYC	1 cut(s)	1326
Hsp92II	CATG	4 cut(s)	212, 395, 1134, 1162
KflI	GGGWCCC	1 cut(s)	336
Kpn2I	TCCGGA	1 cut(s)	1370
Ksp22I	TGATCA	4 cut(s)	820, 1044, 1263, 1444
Kzo9I	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
LmnI	GCTCC	3 cut(s)	199, 209, 1118
Lsp1109I	GCAGC	1 cut(s)	463
LweI	GCATC	1 cut(s)	1111
MaeI	CTAG	1 cut(s)	1549
MaeII	ACGT	1 cut(s)	1326
MaeIII	GTNAC	1 cut(s)	1510
MalI	GATC	7 cut(s)	426, 822, 1014, 1046, 1265, 1383, 1446
MboI	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
MfeI	CAATTG	1 cut(s)	1281
MhlI	GDGCHC	2 cut(s)	206, 399
MlsI	TGGCCA	1 cut(s)	356
MluNI	TGGCCA	1 cut(s)	356
MlyI	GAGTC	1 cut(s)	1447
MmeI	TCCRAC	3 cut(s)	399, 669, 1302
Mox20I	TGGCCA	1 cut(s)	356
Mph1103I	ATGCAT	1 cut(s)	1211
MroI	TCCGGA	1 cut(s)	1370
MroXI	GAANNNNTTC	1 cut(s)	306
MscI	TGGCCA	1 cut(s)	356
MseI	TTAA	2 cut(s)	1341, 1407
MslI	CAYNNNNRTG	1 cut(s)	753
Msp20I	TGGCCA	1 cut(s)	356
MspA1I	CMGCKG	2 cut(s)	844, 986
MspCI	CTTAAG	1 cut(s)	1340
MspI	CCGG	4 cut(s)	680, 908, 1095, 1371
MspR9I	CCNGG	4 cut(s)	246, 1095, 1096, 1434
MunI	CAATTG	1 cut(s)	1281
Mva1269I	GAATGC	3 cut(s)	1042, 1211, 1480
MvaI	CCWGG	2 cut(s)	246, 1434
MwoI	GCNNNNNNNGC	4 cut(s)	824, 1037, 1127, 1421
NciI	CCSGG	2 cut(s)	1095, 1096
NcoI	CCATGG	1 cut(s)	208
NdeII	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
NlaIII	CATG	4 cut(s)	212, 395, 1134, 1162
NlaIV	GGNNCC	6 cut(s)	337, 338, 410, 669, 1089, 1375
NsiI	ATGCAT	1 cut(s)	1211
NspI	RCATGY	1 cut(s)	1134
PagI	TCATGA	2 cut(s)	391, 1158
PceI	AGGCCT	1 cut(s)	188
PctI	GAATGC	3 cut(s)	1042, 1211, 1480
PdmI	GAANNNNTTC	1 cut(s)	306
PfeI	GAWTC	3 cut(s)	1277, 1505, 1517
PflMI	CCANNNNNTGG	1 cut(s)	866
PfoI	TCCNGGA	1 cut(s)	1432
PinAI	ACCGGT	1 cut(s)	679
PkrI	GCNGC	3 cut(s)	11, 478, 843
PleI	GAGTC	1 cut(s)	1447
PpsI	GAGTC	1 cut(s)	1447
PpuMI	RGGWCCY	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	206
Psp5II	RGGWCCY	1 cut(s)	336
Psp6I	CCWGG	2 cut(s)	244, 1432
PspFI	CCCAGC	3 cut(s)	986, 1220, 1479
PspGI	CCWGG	2 cut(s)	244, 1432
PspN4I	GGNNCC	6 cut(s)	337, 338, 410, 669, 1089, 1375
PspPI	GGNCC	4 cut(s)	33, 336, 779, 980
PspPPI	RGGWCCY	1 cut(s)	336
PstNI	CAGNNNCTG	2 cut(s)	223, 251
PvuII	CAGCTG	1 cut(s)	986
RsaI	GTAC	1 cut(s)	1239
RsaNI	GTAC	1 cut(s)	1238
RseI	CAYNNNNRTG	1 cut(s)	753
SacI	GAGCTC	1 cut(s)	206
SaqAI	TTAA	2 cut(s)	1341, 1407
SatI	GCNGC	3 cut(s)	10, 477, 842
Sau3AI	GATC	7 cut(s)	424, 820, 1012, 1044, 1263, 1381, 1444
Sau96I	GGNCC	4 cut(s)	33, 336, 779, 980
SchI	GAGTC	1 cut(s)	1447
ScrFI	CCNGG	4 cut(s)	246, 1095, 1096, 1434
SduI	GDGCHC	2 cut(s)	206, 399
SfaNI	GCATC	1 cut(s)	1111
SinI	GGWCC	3 cut(s)	33, 336, 980
SmaI	CCCGGG	1 cut(s)	1096
SmiMI	CAYNNNNRTG	1 cut(s)	753
SmlI	CTYRAG	5 cut(s)	182, 259, 311, 581, 1340
SmoI	CTYRAG	5 cut(s)	182, 259, 311, 581, 1340
SseBI	AGGCCT	1 cut(s)	188
SsiI	CCGC	2 cut(s)	842, 1526
SspMI	CTAG	1 cut(s)	1549
SstI	GAGCTC	1 cut(s)	206
StuI	AGGCCT	1 cut(s)	188
StyD4I	CCNGG	4 cut(s)	244, 1093, 1094, 1432
StyI	CCWWGG	1 cut(s)	208
TaaI	ACNGT	1 cut(s)	361
TaiI	ACGT	1 cut(s)	1329
TaqI	TCGA	3 cut(s)	200, 1022, 1384
TauI	GCSGC	1 cut(s)	844
TfiI	GAWTC	3 cut(s)	1277, 1505, 1517
Tru1I	TTAA	2 cut(s)	1341, 1407
Tru9I	TTAA	2 cut(s)	1341, 1407
TscAI	CASTG	5 cut(s)	228, 274, 364, 789, 1047
TseI	GCWGC	2 cut(s)	9, 476
TspGWI	ACGGA	2 cut(s)	500, 1529
TspMI	CCCGGG	1 cut(s)	1094
TspRI	CASTG	5 cut(s)	228, 274, 364, 789, 1047
Van91I	CCANNNNNTGG	1 cut(s)	866
Vha464I	CTTAAG	1 cut(s)	1340
VpaK11BI	GGWCC	3 cut(s)	33, 336, 980
XapI	RAATTY	3 cut(s)	863, 1315, 1390
XceI	RCATGY	1 cut(s)	1134
XcmI	CCANNNNNNNNNTGG	1 cut(s)	963
XmaI	CCCGGG	1 cut(s)	1094
XmnI	GAANNNNTTC	1 cut(s)	306
XspI	CTAG	1 cut(s)	1549
ZraI	GACGTC	1 cut(s)	1327
Zsp2I	ATGCAT	1 cut(s)	1211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.