Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0007721

Physical Location & Seq

Genomic Coordinates Forward (+)

16821464 .. 16827937

Gene Structure 6474 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1106400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGTCTGGCCCTGTGGCCATTGGCGATAAAGTGGAAGAAGCACAAACTTTTGCAGAGAGAACAAAGTCTCTTGATGTCATTTCCAGAGAAGACAGAGAATCCATAATAACTAATGGTGAAGTTGCTGATACTTCTGAAATTGCAGCCTTTAGAGTCAGGGAGCTATTACTTCCGAATAGGGAGTCCTATTCTGGACCTGTGCTTGGCAACATCCCTGAAGGAAAGGGAAAATATGTCTGGTCAGATGGCTGCATATATGATGGTGAATGGAGACGGGGGATGAGACATGGGAATGGAAAAATTATTTGGTCTTCAGGTGCCATTTATGAGGGCGAGTTTTCAGGTGGATATATGCATGGCACAGGGACCTACATTGGATCGGATAAGTTGACTTATAAGGGGCGATGGCGGTTAAATCTCAAACATGGTTTGGGATATCAAGTCTATCCTAATGGAGATGCCTTTGAAGGCTCTTGGATGCAGGGGTTGCCAGAAGGGCCTGGCAAGTATACATGGGTAAATGGAAATGTTTATCTAGGAAATATGAAAGGAGGGAAAATGTCAGGGAAAGGAACTCTCACATGGACCAATGGGGATTCATTTGAAGGAAGCTGGTTGAATGGCATGATGCATGGATTTGGAGTATACACGTGGAGTGATGGAGGCTTCTATGTTGGAACTTGGACCCGCGGTTTAAAGGATGGGAAAGGGTCGTTTTATCCAAAAGGCAGCAGACTTCCAGCAGTAGAAGAACTTTACCTGAATGCTTTGAGGAAACGAGGGCTCTTGCCAGATTTAAGAAAACAGAACAACGCACATATCCATCATGCTGGTTCAGGGGATATGGGAAATGCTAAGATTGGAGAGAGGCTGCAGGGATCTCATCGTGCTTCAGCCAACAAAATCTCTAATAGAAATTTGTTAAATTTGGAGCAGTCACATAGAAATGTTTCCTTGGAAAGGCGTTGGAGTCTTGAGGTATCTTTTGAAAAAGTTATTGGACATGATCCATCATTATTGGAGGGTAGAGAAAAAGATTCTGAGACAGAAATTCCAATCTTAGAGCGAGAATATATGCAAGGTGTCTTAATAAGTGAGCTAGTAATAAATAACAGCTTTTCTTCATCATCTAGAAGGGCAAAACGGCGACAAAAGAAACTAGCTAAAGTGGTCAAGAGACCTGGTGAAGCAATCATTAAAGGTCATAGGAGCTATGATCTAATGCTCAGTTTGCAGTTGGGTATCAGGTATACTGTTGGGAAGATAACACCAATACAAAGGAGAGAAGTCCGAGCATCAGATTTTGGCCCTCGGGCAAGTTTTTGGATGAACTTTCCTAAAGAAGGCTCCCAATTGACACCACCTCATCGGTCAGTAGATTTTAGGTGGAAAGACTATTGCCCTATGGTCTTTAGGAATTTAAGGGAGATGTTCAAGATCGATGCTGCTGACTACATGATGTCTATTTGCGGAAATGATGCTCTCAGGGAACTTTCTTCTCCTGGAAAAAGTGGTAGTGTGTTTTTCCTATCTCAAGATGATCGTTTCATGATTAAGACACTGAGGAAATCTGAAGTTCAGGTTCTTTTGCGGATGCTTCCAAGTTATCATCATCATGTAAGGTCGTATGAGAACACCCTCATCACAAAATTCTTTGGTCTTCATAGGATTAAACCTTCAAGTGGTCAAAAGTTCCGCTTTGTAGTGATGGGAAACATGTTCTGCACAGAGCTAAGAATACATCGAAGATTTGATTTGAAAGGTTCATCCCTTGGTCGTTCTGCAGATAAGATCGAAATTGATGAAAATACAACACTTAAGGACTTGGATTTAAACTACTCTTTTTATCTGGAACCTTCTTGGCGAGAGGCTTTAATGAATCAGATTGAGACTGACAGCAAATTTCTGGAGGCGCAGCACATTATGGATTACAGCCTTCTCATGGGAGTGCATTATCGGGCCCCCCAACATCTGCGGTCTGTCATGTCCTACAATAATACCAATCGAGCTGATGGTTTGGGAATCCTTGCAGAGGAAGAGACTCTGGAGGATGAAATCTCTAATTACCCACAAGGACTTGTTTTAATCCCTCGTGGAACAGATGATGCTAGTGTTGTTGTGGGCCCTCACGTGAGAGGTAGCCGGCTGAGAGCATCATCTGCCGGTTTTGAGGAAGTTGATCTCCTTTTACCCGGTACAGCAAGATTCCAAATCCAGCTGGGTGTGAACATGCCAGCAAGGGCAGAGCAGGTTCCTGGCGAACAGGGAGACCAGCAGACATTTCATGAAGTATACGATGTTGTGCTGTATCTCGGAATCATTGACATATTGCAAGACTACAGCATGGGAAAGAAGATTGAACACGCATACAAATCTCTTCAGTTTGATTCCTTGTCCATCTCTGCTGTCGACCCTACATTCTATTCGCGGCGCTTCTTGGAGTTCATCCGGAAGGTGTTTCCTCCAAATGCCTTAACAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005975 GO:0006082 GO:0006520 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

MORN PIP5K

Protein Analysis

828

Amino Acids

93.65

Weight (kDa)

9.05

Isoelectric Point (pI)

44.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	86 - 106	5.3e-07	MORN repeat
MORN	PF02493	155 - 177	1.4e-06	MORN repeat
MORN	PF02493	201 - 222	1.3e-07	MORN repeat
PIP5K	PF01504	489 - 818	9.2e-100	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09920 AT3G09920 AT3G09920 AT3G09920
fragaria_vesca	FvH4_6g16890 FvH4_6g16890 FvH4_6g16890
malus_domestica	MD04G1088700.v1.1 MD12G1106400.v1.1
prunus_persica	Prupe.7G125200_v2.0.a1 Prupe.7G125200_v2.0.a1
pyrus_communis	pycom04g08300 pycom12g10690
rosa_chinensis	RchiOBHm_Chr3g0470911
rosa_laevigata	RLG00000024234
rosa_multiflora	Rmu_co8399353.1_g000001 Rmu_sc0003361.1_g000002 Rmu_sc0010267.1_g000001
rosa_roxburghii	Rroxscaffold_6G00410420
rosa_rugosa	Rorug03G0113600
rosa_samantha	Rh3BG188800 Rh3CG178800 Rh3DG187300
rosa_wichuraiana	Rw3G015390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	396
Acc36I	ACCTGC	1 cut(s)	2239
AccB1I	GGYRCC	1 cut(s)	317
AccI	GTMKAC	5 cut(s)	509, 645, 1250, 2292, 2409
AccII	CGCG	2 cut(s)	690, 2428
AccIII	TCCGGA	1 cut(s)	2448
AciI	CCGC	8 cut(s)	409, 688, 690, 1470, 1591, 1696, 1975, 2428
AclWI	GGATC	3 cut(s)	385, 886, 1001
AcoI	YGGCCR	1 cut(s)	15
AcsI	RAATTY	6 cut(s)	916, 925, 1050, 1417, 1649, 1901
AcuI	CTGAAG	5 cut(s)	237, 297, 876, 1593, 2363
AcvI	CACGTG	2 cut(s)	651, 2131
AfaI	GTAC	1 cut(s)	2197
AfiI	CCNNNNNNNGG	7 cut(s)	203, 960, 1343, 1682, 1942, 2032, 2478
AflII	CTTAAG	1 cut(s)	1817
AflIII	ACRYGT	2 cut(s)	648, 1716
AgsI	TTSAA	8 cut(s)	467, 605, 619, 989, 1435, 1680, 1759, 2360
AjnI	CCWGG	4 cut(s)	499, 1180, 1501, 2254
AjuI	GAANNNNNNNTTGG	4 cut(s)	289, 321, 981, 1013
AluBI	AGCT	9 cut(s)	163, 612, 1099, 1116, 1163, 1212, 1732, 2009, 2218
AluI	AGCT	9 cut(s)	163, 612, 1099, 1116, 1163, 1212, 1732, 2009, 2218
Alw26I	GTCTC	8 cut(s)	72, 265, 277, 1037, 1171, 1883, 2033, 2262
AlwI	GGATC	3 cut(s)	385, 886, 1001
Ama87I	CYCGRG	1 cut(s)	1311
Aor13HI	TCCGGA	1 cut(s)	2448
AoxI	GGCC	6 cut(s)	7, 15, 497, 1306, 1959, 2122
ApaI	GGGCCC	2 cut(s)	1963, 2126
ApeKI	GCWGC	6 cut(s)	143, 249, 729, 871, 1445, 1915
ApoI	RAATTY	6 cut(s)	916, 925, 1050, 1417, 1649, 1901
ArsI	GACNNNNNNTTYG	2 cut(s)	167, 199
Asp700I	GAANNNNTTC	1 cut(s)	949
AspLEI	GCGC	2 cut(s)	1915, 2433
AsuC2I	CCSGG	1 cut(s)	2193
AsuHPI	GGTGA	3 cut(s)	128, 275, 1196
AvaI	CYCGRG	1 cut(s)	1311
AvaII	GGWCC	4 cut(s)	194, 366, 585, 684
BaeGI	GKGCMC	2 cut(s)	1963, 2126
BalI	TGGCCA	1 cut(s)	17
BanI	GGYRCC	1 cut(s)	317
BanII	GRGCYC	3 cut(s)	786, 1963, 2126
BauI	CACGAG	1 cut(s)	2091
BbrPI	CACGTG	2 cut(s)	651, 2131
BbsI	GAAGAC	3 cut(s)	96, 303, 1652
BbvI	GCAGC	6 cut(s)	155, 236, 741, 858, 1432, 1927
BceAI	ACGGC	1 cut(s)	1160
BciT130I	CCWGG	4 cut(s)	501, 1182, 1503, 2256
BcnI	CCSGG	1 cut(s)	2193
BcoDI	GTCTC	8 cut(s)	72, 265, 277, 1037, 1171, 1883, 2033, 2262
BfaI	CTAG	5 cut(s)	536, 1100, 1131, 1160, 2109
BfmI	CTRYAG	3 cut(s)	872, 1782, 2338
BfoI	RGCGCY	1 cut(s)	2434
BfrI	CTTAAG	1 cut(s)	1817
BfuAI	ACCTGC	1 cut(s)	2239
BglI	GCCNNNNNGGC	1 cut(s)	496
BisI	GCNGC	7 cut(s)	144, 250, 730, 872, 1446, 1916, 2429
BlsI	GCNGC	7 cut(s)	145, 251, 731, 873, 1447, 1917, 2430
Bme1390I	CCNGG	5 cut(s)	501, 1182, 1503, 2193, 2256
Bme18I	GGWCC	4 cut(s)	194, 366, 585, 684
BmeT110I	CYCGRG	1 cut(s)	1311
BmiI	GGNNCC	9 cut(s)	319, 367, 686, 1348, 1854, 1961, 1962, 2124, 2253
BmrFI	CCNGG	5 cut(s)	501, 1182, 1503, 2193, 2256
BmsI	GCATC	9 cut(s)	448, 468, 618, 1304, 1432, 1468, 1584, 2095, 2162
BpiI	GAAGAC	3 cut(s)	96, 303, 1652
BpmI	CTGGAG	2 cut(s)	1928, 2066
BpuEI	CTTGAG	2 cut(s)	995, 1518
BpuMI	CCSGG	1 cut(s)	2193
Bsa29I	ATCGAT	1 cut(s)	1440
BsaAI	YACGTR	2 cut(s)	651, 2131
BsaI	GGTCTC	2 cut(s)	1171, 2262
BsaJI	CCNNGG	4 cut(s)	688, 954, 1310, 1771
BsaWI	WCCGGW	1 cut(s)	2448
Bsc4I	CCNNNNNNNGG	7 cut(s)	203, 960, 1343, 1682, 1942, 2032, 2478
Bse118I	RCCGGY	2 cut(s)	2142, 2162
BseAI	TCCGGA	1 cut(s)	2448
BseBI	CCWGG	4 cut(s)	501, 1182, 1503, 2256
BseCI	ATCGAT	1 cut(s)	1440
BseDI	CCNNGG	4 cut(s)	688, 954, 1310, 1771
BseGI	GGATG	9 cut(s)	210, 285, 483, 706, 1332, 1599, 1766, 2056, 2445
BseLI	CCNNNNNNNGG	7 cut(s)	203, 960, 1343, 1682, 1942, 2032, 2478
BseMII	CTCAG	5 cut(s)	1032, 1240, 1498, 1553, 2138
BseSI	GKGCMC	2 cut(s)	1963, 2126
BseXI	GCAGC	6 cut(s)	155, 236, 741, 858, 1432, 1927
BseYI	CCCAGC	1 cut(s)	2218
BsgI	GTGCAG	1 cut(s)	1708
Bsh1236I	CGCG	2 cut(s)	690, 2428
BshFI	GGCC	6 cut(s)	9, 17, 499, 1308, 1961, 2124
BshNI	GGYRCC	1 cut(s)	317
BshVI	ATCGAT	1 cut(s)	1440
BsiHKCI	CYCGRG	1 cut(s)	1311
BsiSI	CCGG	4 cut(s)	2143, 2163, 2193, 2449
BslFI	GGGAC	1 cut(s)	379
BslI	CCNNNNNNNGG	7 cut(s)	203, 960, 1343, 1682, 1942, 2032, 2478
BsmAI	GTCTC	8 cut(s)	72, 265, 277, 1037, 1171, 1883, 2033, 2262
BsmBI	CGTCTC	1 cut(s)	265
BsmFI	GGGAC	1 cut(s)	379
BsmI	GAATGC	1 cut(s)	769
BsnI	GGCC	6 cut(s)	9, 17, 499, 1308, 1961, 2124
Bso31I	GGTCTC	2 cut(s)	1171, 2262
BsoBI	CYCGRG	1 cut(s)	1311
Bsp120I	GGGCCC	2 cut(s)	1959, 2122
Bsp1286I	GDGCHC	3 cut(s)	786, 1963, 2126
Bsp13I	TCCGGA	1 cut(s)	2448
Bsp143I	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
BspACI	CCGC	8 cut(s)	409, 688, 690, 1470, 1591, 1696, 1975, 2428
BspANI	GGCC	6 cut(s)	9, 17, 499, 1308, 1961, 2124
BspCNI	CTCAG	5 cut(s)	1033, 1239, 1497, 1554, 2139
BspDI	ATCGAT	1 cut(s)	1440
BspEI	TCCGGA	1 cut(s)	2448
BspFNI	CGCG	2 cut(s)	690, 2428
BspHI	TCATGA	2 cut(s)	1548, 2284
BspLI	GGNNCC	9 cut(s)	319, 367, 686, 1348, 1854, 1961, 1962, 2124, 2253
BspMAI	CTGCAG	2 cut(s)	876, 1786
BspMI	ACCTGC	1 cut(s)	2239
BspPI	GGATC	3 cut(s)	385, 886, 1001
BspT107I	GGYRCC	1 cut(s)	317
BspTI	CTTAAG	1 cut(s)	1817
BspTNI	GGTCTC	2 cut(s)	1171, 2262
BsrFI	RCCGGY	2 cut(s)	2142, 2162
BssAI	RCCGGY	2 cut(s)	2142, 2162
BssECI	CCNNGG	4 cut(s)	688, 954, 1310, 1771
BssMI	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
BssNAI	GTATAC	4 cut(s)	510, 646, 1251, 2293
BssSI	CACGAG	1 cut(s)	2091
BssT1I	CCWWGG	2 cut(s)	954, 1771
Bst1107I	GTATAC	4 cut(s)	510, 646, 1251, 2293
Bst2BI	CACGAG	1 cut(s)	2091
Bst2UI	CCWGG	4 cut(s)	501, 1182, 1503, 2256
Bst4CI	ACNGT	1 cut(s)	1255
Bst6I	CTCTTC	2 cut(s)	2031, 2382
BstAFI	CTTAAG	1 cut(s)	1817
BstAPI	GCANNNNNTGC	2 cut(s)	487, 2159
BstBAI	YACGTR	2 cut(s)	651, 2131
BstC8I	GCNNGC	2 cut(s)	2144, 2235
BstDEI	CTNAG	8 cut(s)	855, 1041, 1060, 1226, 1484, 1562, 1733, 2147
BstDSI	CCRYGG	1 cut(s)	688
BstENI	CCTNNNNNAGG	4 cut(s)	958, 1341, 2030, 2476
BstF5I	GGATG	9 cut(s)	210, 285, 483, 706, 1332, 1599, 1766, 2056, 2445
BstFNI	CGCG	2 cut(s)	690, 2428
BstH2I	RGCGCY	1 cut(s)	2434
BstHHI	GCGC	2 cut(s)	1915, 2433
BstKTI	GATC	8 cut(s)	380, 881, 1009, 1219, 1440, 1543, 1794, 2182
BstMAI	GTCTC	8 cut(s)	72, 265, 277, 1037, 1171, 1883, 2033, 2262
BstMBI	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
BstMWI	GCNNNNNNNGC	4 cut(s)	487, 496, 1231, 2159
BstNI	CCWGG	4 cut(s)	501, 1182, 1503, 2256
BstNSI	RCATGY	2 cut(s)	1720, 2233
BstSCI	CCNGG	5 cut(s)	499, 1180, 1501, 2191, 2254
BstSFI	CTRYAG	3 cut(s)	872, 1782, 2338
BstSLI	GKGCMC	2 cut(s)	1963, 2126
BstUI	CGCG	2 cut(s)	690, 2428
BstV1I	GCAGC	6 cut(s)	155, 236, 741, 858, 1432, 1927
BstV2I	GAAGAC	3 cut(s)	96, 303, 1652
BstX2I	RGATCY	1 cut(s)	878
BstXI	CCANNNNNNTGG	1 cut(s)	830
BstYI	RGATCY	1 cut(s)	878
BstZ17I	GTATAC	4 cut(s)	510, 646, 1251, 2293
Bsu15I	ATCGAT	1 cut(s)	1440
BsuRI	GGCC	6 cut(s)	9, 17, 499, 1308, 1961, 2124
BsuTUI	ATCGAT	1 cut(s)	1440
BtgI	CCRYGG	1 cut(s)	688
BtgZI	GCGATG	1 cut(s)	418
BtsCI	GGATG	9 cut(s)	210, 285, 483, 706, 1332, 1599, 1766, 2056, 2445
BtsIMutI	CAGTG	1 cut(s)	1559
BveI	ACCTGC	1 cut(s)	2239
Cac8I	GCNNGC	2 cut(s)	2144, 2235
CciI	TCATGA	2 cut(s)	1548, 2284
CfoI	GCGC	2 cut(s)	1915, 2433
Cfr10I	RCCGGY	2 cut(s)	2142, 2162
Cfr42I	CCGCGG	1 cut(s)	691
ClaI	ATCGAT	1 cut(s)	1440
CsiI	ACCWGGT	1 cut(s)	1180
Csp6I	GTAC	1 cut(s)	2196
CviQI	GTAC	1 cut(s)	2196
DdeI	CTNAG	8 cut(s)	855, 1041, 1060, 1226, 1484, 1562, 1733, 2147
DpnI	GATC	8 cut(s)	379, 880, 1008, 1218, 1439, 1542, 1793, 2181
DpnII	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
DraI	TTTAAA	2 cut(s)	696, 1833
EaeI	YGGCCR	1 cut(s)	15
Eam1104I	CTCTTC	2 cut(s)	2031, 2382
EarI	CTCTTC	2 cut(s)	2031, 2382
Eco130I	CCWWGG	2 cut(s)	954, 1771
Eco24I	GRGCYC	3 cut(s)	786, 1963, 2126
Eco31I	GGTCTC	2 cut(s)	1171, 2262
Eco32I	GATATC	1 cut(s)	437
Eco47I	GGWCC	4 cut(s)	194, 366, 585, 684
Eco57I	CTGAAG	5 cut(s)	237, 297, 876, 1593, 2363
Eco72I	CACGTG	2 cut(s)	651, 2131
Eco88I	CYCGRG	1 cut(s)	1311
EcoNI	CCTNNNNNAGG	4 cut(s)	958, 1341, 2030, 2476
EcoO109I	RGGNCCY	4 cut(s)	366, 497, 1960, 2123
EcoRII	CCWGG	4 cut(s)	499, 1180, 1501, 2254
EcoRV	GATATC	1 cut(s)	437
EcoT14I	CCWWGG	2 cut(s)	954, 1771
EcoT22I	ATGCAT	2 cut(s)	357, 633
EcoT38I	GRGCYC	3 cut(s)	786, 1963, 2126
ErhI	CCWWGG	2 cut(s)	954, 1771
Esp3I	CGTCTC	1 cut(s)	265
FalI	AAGNNNNNCTT	2 cut(s)	1682, 1714
FaqI	GGGAC	1 cut(s)	379
FauI	CCCGC	1 cut(s)	695
FblI	GTMKAC	5 cut(s)	509, 645, 1250, 2292, 2409
Fnu4HI	GCNGC	7 cut(s)	144, 250, 730, 872, 1446, 1916, 2429
FokI	GGATG	9 cut(s)	197, 292, 490, 713, 1339, 1606, 1753, 2063, 2432
FriOI	GRGCYC	3 cut(s)	786, 1963, 2126
Fsp4HI	GCNGC	7 cut(s)	144, 250, 730, 872, 1446, 1916, 2429
FspBI	CTAG	5 cut(s)	536, 1100, 1131, 1160, 2109
GlaI	GCGC	2 cut(s)	1914, 2432
GluI	GCNGC	7 cut(s)	144, 250, 730, 872, 1446, 1916, 2429
GsaI	CCCAGC	1 cut(s)	2222
GsuI	CTGGAG	2 cut(s)	1928, 2066
HaeII	RGCGCY	1 cut(s)	2434
HaeIII	GGCC	6 cut(s)	9, 17, 499, 1308, 1961, 2124
HapII	CCGG	4 cut(s)	2143, 2163, 2193, 2449
HhaI	GCGC	2 cut(s)	1915, 2433
Hin6I	GCGC	2 cut(s)	1913, 2431
HinP1I	GCGC	2 cut(s)	1913, 2431
HincII	GTYRAC	2 cut(s)	390, 2410
HindII	GTYRAC	2 cut(s)	390, 2410
HpaII	CCGG	4 cut(s)	2143, 2163, 2193, 2449
HphI	GGTGA	3 cut(s)	128, 275, 1196
Hpy166II	GTNNAC	7 cut(s)	390, 510, 646, 1251, 2227, 2293, 2410
Hpy8I	GTNNAC	7 cut(s)	390, 510, 646, 1251, 2227, 2293, 2410
HpyCH4III	ACNGT	1 cut(s)	1255
HpyCH4IV	ACGT	2 cut(s)	650, 2130
HpyF10VI	GCNNNNNNNGC	4 cut(s)	487, 496, 1231, 2159
HpyF3I	CTNAG	8 cut(s)	855, 1041, 1060, 1226, 1484, 1562, 1733, 2147
HpySE526I	ACGT	2 cut(s)	650, 2130
HspAI	GCGC	2 cut(s)	1913, 2431
Kpn2I	TCCGGA	1 cut(s)	2448
KroI	GCCGGC	1 cut(s)	2142
KroNI	GCCGGC	1 cut(s)	2144
KspI	CCGCGG	1 cut(s)	691
Kzo9I	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
LmnI	GCTCC	4 cut(s)	160, 931, 1209, 1352
Lsp1109I	GCAGC	6 cut(s)	155, 236, 741, 858, 1432, 1927
LweI	GCATC	9 cut(s)	448, 468, 618, 1304, 1432, 1468, 1584, 2095, 2162
MabI	ACCWGGT	1 cut(s)	1180
MaeI	CTAG	5 cut(s)	536, 1100, 1131, 1160, 2109
MaeII	ACGT	2 cut(s)	650, 2130
MaeIII	GTNAC	1 cut(s)	936
MalI	GATC	8 cut(s)	379, 880, 1008, 1218, 1439, 1542, 1793, 2181
MboI	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
MfeI	CAATTG	1 cut(s)	1352
MflI	RGATCY	1 cut(s)	878
MhlI	GDGCHC	3 cut(s)	786, 1963, 2126
MlsI	TGGCCA	1 cut(s)	17
MluNI	TGGCCA	1 cut(s)	17
MlyI	GAGTC	4 cut(s)	162, 191, 979, 2035
MmeI	TCCRAC	2 cut(s)	655, 947
Mox20I	TGGCCA	1 cut(s)	17
Mph1103I	ATGCAT	2 cut(s)	357, 633
MroI	TCCGGA	1 cut(s)	2448
MroNI	GCCGGC	1 cut(s)	2142
MroXI	GAANNNNTTC	1 cut(s)	949
MscI	TGGCCA	1 cut(s)	17
MslI	CAYNNNNRTG	4 cut(s)	291, 945, 1614, 1946
Msp20I	TGGCCA	1 cut(s)	17
MspA1I	CMGCKG	2 cut(s)	690, 2218
MspCI	CTTAAG	1 cut(s)	1817
MspI	CCGG	4 cut(s)	2143, 2163, 2193, 2449
MspR9I	CCNGG	5 cut(s)	501, 1182, 1503, 2193, 2256
MunI	CAATTG	1 cut(s)	1352
Mva1269I	GAATGC	1 cut(s)	769
MvaI	CCWGG	4 cut(s)	501, 1182, 1503, 2256
MvnI	CGCG	2 cut(s)	690, 2428
MwoI	GCNNNNNNNGC	4 cut(s)	487, 496, 1231, 2159
NaeI	GCCGGC	1 cut(s)	2144
NciI	CCSGG	1 cut(s)	2193
NdeII	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
NgoMIV	GCCGGC	1 cut(s)	2142
NlaIV	GGNNCC	9 cut(s)	319, 367, 686, 1348, 1854, 1961, 1962, 2124, 2253
NmuCI	GTSAC	1 cut(s)	936
NsiI	ATGCAT	2 cut(s)	357, 633
NspI	RCATGY	2 cut(s)	1720, 2233
PagI	TCATGA	2 cut(s)	1548, 2284
PciI	ACATGT	1 cut(s)	1716
PctI	GAATGC	1 cut(s)	769
PdiI	GCCGGC	1 cut(s)	2144
PdmI	GAANNNNTTC	1 cut(s)	949
PfeI	GAWTC	8 cut(s)	98, 596, 1037, 1879, 2022, 2205, 2316, 2387
PfoI	TCCNGGA	1 cut(s)	1501
PkrI	GCNGC	7 cut(s)	145, 251, 731, 873, 1447, 1917, 2430
PleI	GAGTC	4 cut(s)	161, 190, 978, 2035
PmaCI	CACGTG	2 cut(s)	651, 2131
PmlI	CACGTG	2 cut(s)	651, 2131
PpsI	GAGTC	4 cut(s)	161, 190, 978, 2035
Ppu21I	YACGTR	2 cut(s)	651, 2131
PpuMI	RGGWCCY	1 cut(s)	366
PscI	ACATGT	1 cut(s)	1716
PsiI	TTATAA	1 cut(s)	396
Psp5II	RGGWCCY	1 cut(s)	366
Psp6I	CCWGG	4 cut(s)	499, 1180, 1501, 2254
PspCI	CACGTG	2 cut(s)	651, 2131
PspFI	CCCAGC	1 cut(s)	2218
PspGI	CCWGG	4 cut(s)	499, 1180, 1501, 2254
PspN4I	GGNNCC	9 cut(s)	319, 367, 686, 1348, 1854, 1961, 1962, 2124, 2253
PspOMI	GGGCCC	2 cut(s)	1959, 2122
PspPPI	RGGWCCY	1 cut(s)	366
PstI	CTGCAG	2 cut(s)	876, 1786
PsuI	RGATCY	1 cut(s)	878
PvuII	CAGCTG	1 cut(s)	2218
RsaI	GTAC	1 cut(s)	2197
RsaNI	GTAC	1 cut(s)	2196
RseI	CAYNNNNRTG	4 cut(s)	291, 945, 1614, 1946
SacII	CCGCGG	1 cut(s)	691
SalI	GTCGAC	1 cut(s)	2408
SatI	GCNGC	7 cut(s)	144, 250, 730, 872, 1446, 1916, 2429
Sau3AI	GATC	8 cut(s)	377, 878, 1006, 1216, 1437, 1540, 1791, 2179
SchI	GAGTC	4 cut(s)	162, 191, 979, 2035
ScrFI	CCNGG	5 cut(s)	501, 1182, 1503, 2193, 2256
SduI	GDGCHC	3 cut(s)	786, 1963, 2126
SexAI	ACCWGGT	1 cut(s)	1180
SfaNI	GCATC	9 cut(s)	448, 468, 618, 1304, 1432, 1468, 1584, 2095, 2162
SfcI	CTRYAG	3 cut(s)	872, 1782, 2338
Sfr303I	CCGCGG	1 cut(s)	691
SgrBI	CCGCGG	1 cut(s)	691
SinI	GGWCC	4 cut(s)	194, 366, 585, 684
SmiMI	CAYNNNNRTG	4 cut(s)	291, 945, 1614, 1946
SmlI	CTYRAG	3 cut(s)	974, 1533, 1817
SmoI	CTYRAG	3 cut(s)	974, 1533, 1817
SsiI	CCGC	8 cut(s)	409, 688, 690, 1470, 1591, 1696, 1975, 2428
SspMI	CTAG	5 cut(s)	536, 1100, 1131, 1160, 2109
StyD4I	CCNGG	5 cut(s)	499, 1180, 1501, 2191, 2254
StyI	CCWWGG	2 cut(s)	954, 1771
TaaI	ACNGT	1 cut(s)	1255
TaiI	ACGT	2 cut(s)	653, 2133
TaqI	TCGA	5 cut(s)	1440, 1744, 1794, 2005, 2409
TaqII	GACCGA	1 cut(s)	1359
TauI	GCSGC	1 cut(s)	2431
TfiI	GAWTC	8 cut(s)	98, 596, 1037, 1879, 2022, 2205, 2316, 2387
TscAI	CASTG	1 cut(s)	1566
TseFI	GTSAC	1 cut(s)	936
TseI	GCWGC	6 cut(s)	143, 249, 729, 871, 1445, 1915
Tsp45I	GTSAC	1 cut(s)	936
TspRI	CASTG	1 cut(s)	1566
Vha464I	CTTAAG	1 cut(s)	1817
VpaK11BI	GGWCC	4 cut(s)	194, 366, 585, 684
XagI	CCTNNNNNAGG	4 cut(s)	958, 1341, 2030, 2476
XapI	RAATTY	6 cut(s)	916, 925, 1050, 1417, 1649, 1901
XbaI	TCTAGA	1 cut(s)	1130
XceI	RCATGY	2 cut(s)	1720, 2233
XmiI	GTMKAC	5 cut(s)	509, 645, 1250, 2292, 2409
XmnI	GAANNNNTTC	1 cut(s)	949
XspI	CTAG	5 cut(s)	536, 1100, 1131, 1160, 2109
Zsp2I	ATGCAT	2 cut(s)	357, 633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.