Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0007721

Physical Location & Seq

Genomic Coordinates Reverse (-)

16656115 .. 16660975

Gene Structure 4861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG188800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGTCTGGCCCTGTGGCCATTGACGATAACTTGAAAGGAGCACGATCTTTTGCAGAGAGAACAAGATCTCTTGATGTCATTTCGGACAAAGACAGAGAGTTCGTATTAAATAATGGTGAATCTGCTCATATTTCTGAACCTGCTGCATTTAGAGTCACAGAGCTCTTACTTCCAAATAGCGAAACATATGCCGGACCACTGCTTGGCAACATCCCCGAGGGTAGGGGAAAGTATCTGTGGTCAGATGGCTGCATATATGAGGGTGAGTGGAGACGGGGGATGAGACATGGAAGTGGAAAAATATCATGGCCTTCAGGTGCTGTTTATGAGGGCGAATTTTCAGGTGGATATATGCATGGTGCAGGGACATACATTGGATCAGATAACTTGAATTACAAGGGGCGATGGCGGTTGAATCTGAAACATGGTTTGGGATATCAAGTTTATCCAAATGGAGATATCTTTGAAGGCTCTTGGATGCAGGGATTGCCAGAAGGGCCAGGTAAGTATACATGGCTGCATGGAAATGTTTATGTAGGAAACATGAAAGGTGGGAAAATGTCAGGGAAAGGAACTCTCACTTGGATAAATGGGGACTCATTTGAAGGAAGCTGGCTGAATGGCATGATGCATGGATTTGGAGTATACACATGGAGTGATGGAGGCTTCTATGTTGGAACTTGGACTAGGGGCCTAAAGGATGGGAAAGGATCATTTTATCCAAGAGGCAGCAGACTTCCAGCAGTAGAAGAACTTTACCTCAATGCTTTGAGGAAAAGAGGGCTCTTGCCAGATTTAAGAAAGCAGAAGCTGCAAAACAAGTCACATATTCATCATGCTACTTCAGCAGATTTGGGAAATGTCAAGATCGGGGAGATCCAGGGATCTCATGCTGCTTCAGTTGATAAATTGTCTAAGAGAAATCTTTTGAATTTGGAACAATCTCATAATAGAAATGTTTCCTTAGAAAGGCGTTGGAGTCTTGAGGTATCTATAGAAAAAGTGATTGCACATGATTCATCTCTAACTGAAGGTGGAGAAAATGATACTGGGGCAAACATTCCAATCTTGGAACGAGAATATATGCAAGGTGTCTTAATCAGCGAGCTAGTAATAAATAATTCATTCTCATCATCGAATAGAAGAGCAAAGCGGAGACAAAAGAAACTAGCAAAAGTGGTTAAGAGACCTGGTGAAGCAATCATTAAAGGTCACAGAAGTTACGATCTAATGCTCAGTTTGCAGCTTGGTATCAGGTATACTGTTGGTAAGATTACACCAATACAAAGAAGAGAAGTTCGAGCATCGGATTTTGGTCCTCGGGCCAGTTTTTGGATGAATTTTCCAAAAGAAGGCTCCCAATTGACACCACCTCATCAGTCAGTAGATTTTAAGTGGAAAGACTACTGTCCAATGGTCTTCAGGAATTTAAGGGAGATGTTCAAAATTGATGCTGCCGACTACATGATGTCTATTTGTGGAAATGATGCTCTCAGAGAACTTTCTTCTCCTGGAAAAAGTGGTAGTGTCTTTTTCCTATCTCAAGATGATCGTTTCATGATTAAGACACTCAGGAAATCTGAAGTTCAGGTTCTTCTACGAATGCTTCCTAGTTATCATCATCATGTAAAGACGTATGAAAACACCCTCATCACAAAATTCTTCGGCCTTCACAGGATTAAACCTTCAAGTGGTCAAAAGTTCCGGTTTGTAGTGATGGGAAACATGTTCTGCACAGAGTTAAGAATACATAGAAGATTTGATTTGAAAGGTTCATCCCTTGGGCGTTCTGCAGATAAGATTGAAATTGATGAAAACACCACGTTAAAGGACTTGGATTTAAACTACTGCTTTTATTTGGAACCTTCTTGGCGGGAGTCTTTATTGAATCAAATTGAGACTGACAGCAAATTTCTGGAGGCACAACACATAATGGATTATAGCCTTCTCCTGGGTGTGCATTACCGAGCCCCCCAACATCTGCGGTCTCTCATGTCCTACAATACAAGCACTAGAGCTGATGGATTGGGAATGGTTGCAGAGGAAGAGGCTCTGGAGGACGAGATCTCCAACTACCCGCAAGGACTTGTCTTAATCCCGCGCGGAACAGATGATGGTACTGTTGTTGCAGGCCCTCACATCAGAGGTAACCGACTGAGAGCATCATCTGCTGGTTATGAGGAAGTGGATCTTCTTTTACCTGGCACTGCAAGACTCCAAGTTCAACTGGGTGTAAACATGCCATCAAGAGCAGAGCAGATTATGGAGAATCAGGGAGACGAGCAGATGTTTCATGGAGTGTATGATGTTGTGCTATATCTTGGGATCATTGATATATTGCAAGACTACAACATGGGCAAGAAGATTGAACATGCATACAAATCTCTTCAGTTTGATTCCTTATCCATCTCCGCTGTGGACCCTACATTCTACTCCCGACGCTTCTTGGAATTCATTCAGAAGGTCTTCCCTCCTAATGTTGCAACAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005975 GO:0006082 GO:0006520 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

MORN PIP5K

Protein Analysis

830

Amino Acids

93.66

Weight (kDa)

8.83

Isoelectric Point (pI)

45.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	86 - 107	5.7e-08	MORN repeat
MORN	PF02493	201 - 222	1.3e-07	MORN repeat
PIP5K	PF01504	492 - 821	5.8e-100	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09920 AT3G09920 AT3G09920 AT3G09920
fragaria_vesca	FvH4_6g16890 FvH4_6g16890 FvH4_6g16890
malus_domestica	MD04G1088700.v1.1 MD12G1106400.v1.1
prunus_persica	Prupe.7G125200_v2.0.a1 Prupe.7G125200_v2.0.a1
pyrus_communis	pycom04g08300 pycom12g10690
rosa_chinensis	RchiOBHm_Chr3g0470911
rosa_laevigata	RLG00000024234
rosa_multiflora	Rmu_co8399353.1_g000001 Rmu_sc0003361.1_g000002 Rmu_sc0010267.1_g000001
rosa_roxburghii	Rroxscaffold_6G00410420
rosa_rugosa	Rorug03G0113600
rosa_samantha	Rh3BG188800 Rh3CG178800 Rh3DG187300
rosa_wichuraiana	Rw3G015390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	148
AccB7I	CCANNNNNTGG	2 cut(s)	203, 1332
AccI	GTMKAC	3 cut(s)	509, 645, 1259
AccII	CGCG	2 cut(s)	2101, 2103
AciI	CCGC	8 cut(s)	409, 1153, 1873, 1984, 2078, 2099, 2103, 2412
AclWI	GGATC	6 cut(s)	385, 718, 871, 892, 2196, 2333
AcoI	YGGCCR	1 cut(s)	15
AcsI	RAATTY	7 cut(s)	335, 931, 1339, 1426, 1658, 1910, 2450
AcuI	CTGAAG	7 cut(s)	297, 828, 882, 1050, 1405, 1602, 2372
AfaI	GTAC	1 cut(s)	2119
AfiI	CCNNNNNNNGG	7 cut(s)	203, 222, 969, 1332, 1352, 1691, 1951
AflIII	ACRYGT	1 cut(s)	1725
AjnI	CCWGG	6 cut(s)	499, 879, 1189, 1510, 1950, 2200
AjuI	GAANNNNNNNTTGG	4 cut(s)	413, 445, 565, 597
AluBI	AGCT	6 cut(s)	163, 612, 811, 1108, 1246, 2018
AluI	AGCT	6 cut(s)	163, 612, 811, 1108, 1246, 2018
Alw21I	GWGCWC	2 cut(s)	43, 165
Alw26I	GTCTC	7 cut(s)	265, 277, 1150, 1180, 1892, 1992, 2271
AlwI	GGATC	6 cut(s)	385, 718, 871, 892, 2196, 2333
AlwNI	CAGNNNCTG	2 cut(s)	320, 811
Ama87I	CYCGRG	2 cut(s)	215, 1320
AoxI	GGCC	8 cut(s)	7, 15, 308, 497, 691, 1323, 1666, 2131
ApeKI	GCWGC	8 cut(s)	143, 249, 517, 729, 811, 893, 1243, 1454
ApoI	RAATTY	7 cut(s)	335, 931, 1339, 1426, 1658, 1910, 2450
ArsI	GACNNNNNNTTYG	2 cut(s)	83, 115
Asp700I	GAANNNNTTC	3 cut(s)	958, 2454, 2465
AspLEI	GCGC	1 cut(s)	2103
AspS9I	GGNCC	8 cut(s)	8, 194, 497, 691, 1316, 1323, 2132, 2419
AsuHPI	GGTGA	3 cut(s)	128, 275, 1205
AvaI	CYCGRG	2 cut(s)	215, 1320
AvaII	GGWCC	3 cut(s)	194, 1316, 2419
BaeI	ACNNNNGTAYC	2 cut(s)	2109, 2142
BalI	TGGCCA	1 cut(s)	17
BanII	GRGCYC	3 cut(s)	165, 786, 1972
BbsI	GAAGAC	2 cut(s)	1411, 2458
Bbv12I	GWGCWC	2 cut(s)	43, 165
BbvI	GCAGC	8 cut(s)	130, 236, 504, 741, 798, 880, 1255, 1441
BccI	CCATC	9 cut(s)	239, 399, 653, 695, 1711, 2015, 2108, 2251, 2414
BcgI	CGANNNNNNTGC	2 cut(s)	170, 204
BciT130I	CCWGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
BcoDI	GTCTC	7 cut(s)	265, 277, 1150, 1180, 1892, 1992, 2271
BfaI	CTAG	5 cut(s)	687, 1109, 1169, 1611, 2013
BfmI	CTRYAG	2 cut(s)	993, 1791
BfuAI	ACCTGC	1 cut(s)	148
BglI	GCCNNNNNGGC	1 cut(s)	496
BglII	AGATCT	2 cut(s)	65, 2064
BisI	GCNGC	8 cut(s)	144, 250, 518, 730, 812, 894, 1244, 1455
BlsI	GCNGC	8 cut(s)	145, 251, 519, 731, 813, 895, 1245, 1456
Bme1390I	CCNGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
Bme18I	GGWCC	3 cut(s)	194, 1316, 2419
BmeT110I	CYCGRG	2 cut(s)	215, 1320
BmgT120I	GGNCC	8 cut(s)	8, 194, 497, 691, 1316, 1323, 2132, 2419
BmiI	GGNNCC	4 cut(s)	692, 1357, 1863, 2421
BmrFI	CCNGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
BmrI	ACTGGG	2 cut(s)	1059, 2237
BmsI	GCATC	6 cut(s)	468, 618, 1313, 1441, 1477, 2171
BmuI	ACTGGG	2 cut(s)	1059, 2237
BoxI	GACNNNNGTC	1 cut(s)	1407
BpiI	GAAGAC	2 cut(s)	1411, 2458
BpmI	CTGGAG	2 cut(s)	1937, 2075
BpuEI	CTTGAG	2 cut(s)	1004, 1527
BsaI	GGTCTC	2 cut(s)	1180, 1992
BsaJI	CCNNGG	5 cut(s)	216, 880, 1319, 1780, 1951
BsaWI	WCCGGW	1 cut(s)	1704
BsaXI	ACNNNNNCTCC	2 cut(s)	2051, 2081
Bsc4I	CCNNNNNNNGG	7 cut(s)	203, 222, 969, 1332, 1352, 1691, 1951
Bse1I	ACTGG	3 cut(s)	1054, 1326, 2232
BseBI	CCWGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
BseDI	CCNNGG	5 cut(s)	216, 880, 1319, 1780, 1951
BseGI	GGATG	6 cut(s)	210, 285, 483, 706, 1341, 1775
BseLI	CCNNNNNNNGG	7 cut(s)	203, 222, 969, 1332, 1352, 1691, 1951
BseMII	CTCAG	4 cut(s)	1249, 1507, 1585, 2147
BseNI	ACTGG	3 cut(s)	1054, 1326, 2232
BseXI	GCAGC	8 cut(s)	130, 236, 504, 741, 798, 880, 1255, 1441
BsgI	GTGCAG	2 cut(s)	381, 1717
Bsh1236I	CGCG	2 cut(s)	2101, 2103
BshFI	GGCC	8 cut(s)	9, 17, 310, 499, 693, 1325, 1668, 2133
BsiHKAI	GWGCWC	2 cut(s)	43, 165
BsiHKCI	CYCGRG	2 cut(s)	215, 1320
BsiSI	CCGG	2 cut(s)	192, 1705
BslFI	GGGAC	2 cut(s)	379, 608
BslI	CCNNNNNNNGG	7 cut(s)	203, 222, 969, 1332, 1352, 1691, 1951
BsmAI	GTCTC	7 cut(s)	265, 277, 1150, 1180, 1892, 1992, 2271
BsmBI	CGTCTC	2 cut(s)	265, 2271
BsmFI	GGGAC	2 cut(s)	379, 608
BsmI	GAATGC	1 cut(s)	1608
BsnI	GGCC	8 cut(s)	9, 17, 310, 499, 693, 1325, 1668, 2133
Bso31I	GGTCTC	2 cut(s)	1180, 1992
BsoBI	CYCGRG	2 cut(s)	215, 1320
Bsp1286I	GDGCHC	4 cut(s)	43, 165, 786, 1972
BspACI	CCGC	8 cut(s)	409, 1153, 1873, 1984, 2078, 2099, 2103, 2412
BspANI	GGCC	8 cut(s)	9, 17, 310, 499, 693, 1325, 1668, 2133
BspCNI	CTCAG	4 cut(s)	1248, 1506, 1584, 2148
BspFNI	CGCG	2 cut(s)	2101, 2103
BspHI	TCATGA	1 cut(s)	1557
BspLI	GGNNCC	4 cut(s)	692, 1357, 1863, 2421
BspMAI	CTGCAG	1 cut(s)	1795
BspMI	ACCTGC	1 cut(s)	148
BspPI	GGATC	6 cut(s)	385, 718, 871, 892, 2196, 2333
BspQI	GCTCTTC	1 cut(s)	1138
BspTNI	GGTCTC	2 cut(s)	1180, 1992
BsrI	ACTGG	3 cut(s)	1054, 1326, 2232
BssECI	CCNNGG	5 cut(s)	216, 880, 1319, 1780, 1951
BssNAI	GTATAC	3 cut(s)	510, 646, 1260
BssT1I	CCWWGG	1 cut(s)	1780
Bst1107I	GTATAC	3 cut(s)	510, 646, 1260
Bst2UI	CCWGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
Bst4CI	ACNGT	3 cut(s)	1264, 1409, 2122
Bst6I	CTCTTC	4 cut(s)	1138, 1285, 2040, 2391
BstAPI	GCANNNNNTGC	3 cut(s)	487, 811, 2168
BstC8I	GCNNGC	3 cut(s)	614, 1106, 2131
BstDEI	CTNAG	6 cut(s)	915, 964, 1235, 1493, 1571, 2156
BstEII	GGTNACC	1 cut(s)	2147
BstENI	CCTNNNNNAGG	1 cut(s)	967
BstF5I	GGATG	6 cut(s)	210, 285, 483, 706, 1341, 1775
BstFNI	CGCG	2 cut(s)	2101, 2103
BstHHI	GCGC	1 cut(s)	2103
BstMAI	GTCTC	7 cut(s)	265, 277, 1150, 1180, 1892, 1992, 2271
BstMWI	GCNNNNNNNGC	6 cut(s)	487, 496, 811, 845, 1240, 2168
BstNI	CCWGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
BstNSI	RCATGY	3 cut(s)	1729, 2242, 2375
BstPAI	GACNNNNGTC	1 cut(s)	1407
BstPI	GGTNACC	1 cut(s)	2147
BstSCI	CCNGG	6 cut(s)	499, 879, 1189, 1510, 1950, 2200
BstSFI	CTRYAG	2 cut(s)	993, 1791
BstUI	CGCG	2 cut(s)	2101, 2103
BstV1I	GCAGC	8 cut(s)	130, 236, 504, 741, 798, 880, 1255, 1441
BstV2I	GAAGAC	2 cut(s)	1411, 2458
BstX2I	RGATCY	5 cut(s)	65, 876, 884, 2064, 2188
BstYI	RGATCY	5 cut(s)	65, 876, 884, 2064, 2188
BstZ17I	GTATAC	3 cut(s)	510, 646, 1260
BsuRI	GGCC	8 cut(s)	9, 17, 310, 499, 693, 1325, 1668, 2133
BtgZI	GCGATG	1 cut(s)	418
BtsCI	GGATG	6 cut(s)	210, 285, 483, 706, 1341, 1775
BtsI	GCAGTG	2 cut(s)	197, 2205
BtsIMutI	CAGTG	2 cut(s)	197, 2205
BveI	ACCTGC	1 cut(s)	148
Cac8I	GCNNGC	3 cut(s)	614, 1106, 2131
CaiI	CAGNNNCTG	2 cut(s)	320, 811
CciI	TCATGA	1 cut(s)	1557
CfoI	GCGC	1 cut(s)	2103
Cfr13I	GGNCC	8 cut(s)	8, 194, 497, 691, 1316, 1323, 2132, 2419
CseI	GACGC	1 cut(s)	2448
CsiI	ACCWGGT	1 cut(s)	1189
Csp6I	GTAC	1 cut(s)	2118
CviQI	GTAC	1 cut(s)	2118
DdeI	CTNAG	6 cut(s)	915, 964, 1235, 1493, 1571, 2156
DraI	TTTAAA	1 cut(s)	1842
EaeI	YGGCCR	1 cut(s)	15
Eam1104I	CTCTTC	4 cut(s)	1138, 1285, 2040, 2391
EarI	CTCTTC	4 cut(s)	1138, 1285, 2040, 2391
Ecl136II	GAGCTC	1 cut(s)	163
Eco130I	CCWWGG	1 cut(s)	1780
Eco24I	GRGCYC	3 cut(s)	165, 786, 1972
Eco31I	GGTCTC	2 cut(s)	1180, 1992
Eco32I	GATATC	2 cut(s)	437, 460
Eco47I	GGWCC	3 cut(s)	194, 1316, 2419
Eco53kI	GAGCTC	1 cut(s)	163
Eco57I	CTGAAG	7 cut(s)	297, 828, 882, 1050, 1405, 1602, 2372
Eco88I	CYCGRG	2 cut(s)	215, 1320
Eco91I	GGTNACC	1 cut(s)	2147
EcoICRI	GAGCTC	1 cut(s)	163
EcoNI	CCTNNNNNAGG	1 cut(s)	967
EcoO109I	RGGNCCY	2 cut(s)	691, 2132
EcoO65I	GGTNACC	1 cut(s)	2147
EcoRI	GAATTC	1 cut(s)	2450
EcoRII	CCWGG	6 cut(s)	499, 879, 1189, 1510, 1950, 2200
EcoRV	GATATC	2 cut(s)	437, 460
EcoT14I	CCWWGG	1 cut(s)	1780
EcoT22I	ATGCAT	3 cut(s)	357, 633, 2377
EcoT38I	GRGCYC	3 cut(s)	165, 786, 1972
ErhI	CCWWGG	1 cut(s)	1780
Esp3I	CGTCTC	2 cut(s)	265, 2271
FalI	AAGNNNNNCTT	2 cut(s)	2175, 2207
FaqI	GGGAC	2 cut(s)	379, 608
FauI	CCCGC	3 cut(s)	1866, 2085, 2106
FauNDI	CATATG	1 cut(s)	187
FblI	GTMKAC	3 cut(s)	509, 645, 1259
Fnu4HI	GCNGC	8 cut(s)	144, 250, 518, 730, 812, 894, 1244, 1455
FokI	GGATG	6 cut(s)	197, 292, 490, 713, 1348, 1762
FriOI	GRGCYC	3 cut(s)	165, 786, 1972
Fsp4HI	GCNGC	8 cut(s)	144, 250, 518, 730, 812, 894, 1244, 1455
FspBI	CTAG	5 cut(s)	687, 1109, 1169, 1611, 2013
GlaI	GCGC	1 cut(s)	2102
GluI	GCNGC	8 cut(s)	144, 250, 518, 730, 812, 894, 1244, 1455
GsuI	CTGGAG	2 cut(s)	1937, 2075
HaeIII	GGCC	8 cut(s)	9, 17, 310, 499, 693, 1325, 1668, 2133
HapII	CCGG	2 cut(s)	192, 1705
HgaI	GACGC	1 cut(s)	2448
HhaI	GCGC	1 cut(s)	2103
Hin6I	GCGC	1 cut(s)	2101
HinP1I	GCGC	1 cut(s)	2101
HpaII	CCGG	2 cut(s)	192, 1705
HphI	GGTGA	3 cut(s)	128, 275, 1205
Hpy166II	GTNNAC	5 cut(s)	510, 646, 1260, 2236, 2419
Hpy8I	GTNNAC	5 cut(s)	510, 646, 1260, 2236, 2419
Hpy99I	CGWCG	1 cut(s)	2442
HpyCH4III	ACNGT	3 cut(s)	1264, 1409, 2122
HpyCH4IV	ACGT	2 cut(s)	1634, 1823
HpyF10VI	GCNNNNNNNGC	6 cut(s)	487, 496, 811, 845, 1240, 2168
HpyF3I	CTNAG	6 cut(s)	915, 964, 1235, 1493, 1571, 2156
HpySE526I	ACGT	2 cut(s)	1634, 1823
HspAI	GCGC	1 cut(s)	2101
LguI	GCTCTTC	1 cut(s)	1138
LmnI	GCTCC	2 cut(s)	38, 1361
Lsp1109I	GCAGC	8 cut(s)	130, 236, 504, 741, 798, 880, 1255, 1441
LweI	GCATC	6 cut(s)	468, 618, 1313, 1441, 1477, 2171
MabI	ACCWGGT	1 cut(s)	1189
MaeI	CTAG	5 cut(s)	687, 1109, 1169, 1611, 2013
MaeII	ACGT	2 cut(s)	1634, 1823
MaeIII	GTNAC	5 cut(s)	154, 822, 1211, 1220, 2147
MfeI	CAATTG	1 cut(s)	1361
MflI	RGATCY	5 cut(s)	65, 876, 884, 2064, 2188
MhlI	GDGCHC	4 cut(s)	43, 165, 786, 1972
MlsI	TGGCCA	1 cut(s)	17
MluNI	TGGCCA	1 cut(s)	17
MlyI	GAGTC	5 cut(s)	162, 590, 988, 1886, 2208
MmeI	TCCRAC	3 cut(s)	655, 956, 2094
Mox20I	TGGCCA	1 cut(s)	17
Mph1103I	ATGCAT	3 cut(s)	357, 633, 2377
MroXI	GAANNNNTTC	3 cut(s)	958, 2454, 2465
MscI	TGGCCA	1 cut(s)	17
MslI	CAYNNNNRTG	3 cut(s)	291, 525, 1623
Msp20I	TGGCCA	1 cut(s)	17
MspA1I	CMGCKG	1 cut(s)	2414
MspI	CCGG	2 cut(s)	192, 1705
MspR9I	CCNGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
MunI	CAATTG	1 cut(s)	1361
Mva1269I	GAATGC	1 cut(s)	1608
MvaI	CCWGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
MvnI	CGCG	2 cut(s)	2101, 2103
MwoI	GCNNNNNNNGC	6 cut(s)	487, 496, 811, 845, 1240, 2168
NdeI	CATATG	1 cut(s)	187
NlaIV	GGNNCC	4 cut(s)	692, 1357, 1863, 2421
NmuCI	GTSAC	3 cut(s)	154, 822, 1211
NsiI	ATGCAT	3 cut(s)	357, 633, 2377
NspI	RCATGY	3 cut(s)	1729, 2242, 2375
PagI	TCATGA	1 cut(s)	1557
PciI	ACATGT	1 cut(s)	1725
PciSI	GCTCTTC	1 cut(s)	1138
PctI	GAATGC	1 cut(s)	1608
PdmI	GAANNNNTTC	3 cut(s)	958, 2454, 2465
PfeI	GAWTC	6 cut(s)	119, 415, 1016, 1888, 2269, 2396
PflMI	CCANNNNNTGG	2 cut(s)	203, 1332
PfoI	TCCNGGA	1 cut(s)	1510
PkrI	GCNGC	8 cut(s)	145, 251, 519, 731, 813, 895, 1245, 1456
PleI	GAGTC	5 cut(s)	161, 590, 987, 1885, 2208
PpsI	GAGTC	5 cut(s)	161, 590, 987, 1885, 2208
PscI	ACATGT	1 cut(s)	1725
PshAI	GACNNNNGTC	1 cut(s)	1407
Psp124BI	GAGCTC	1 cut(s)	165
Psp6I	CCWGG	6 cut(s)	499, 879, 1189, 1510, 1950, 2200
PspEI	GGTNACC	1 cut(s)	2147
PspGI	CCWGG	6 cut(s)	499, 879, 1189, 1510, 1950, 2200
PspN4I	GGNNCC	4 cut(s)	692, 1357, 1863, 2421
PspPI	GGNCC	8 cut(s)	8, 194, 497, 691, 1316, 1323, 2132, 2419
PstI	CTGCAG	1 cut(s)	1795
PstNI	CAGNNNCTG	2 cut(s)	320, 811
PsuI	RGATCY	5 cut(s)	65, 876, 884, 2064, 2188
RsaI	GTAC	1 cut(s)	2119
RsaNI	GTAC	1 cut(s)	2118
RseI	CAYNNNNRTG	3 cut(s)	291, 525, 1623
SacI	GAGCTC	1 cut(s)	165
SapI	GCTCTTC	1 cut(s)	1138
SatI	GCNGC	8 cut(s)	144, 250, 518, 730, 812, 894, 1244, 1455
Sau96I	GGNCC	8 cut(s)	8, 194, 497, 691, 1316, 1323, 2132, 2419
SchI	GAGTC	5 cut(s)	162, 590, 988, 1886, 2208
ScrFI	CCNGG	6 cut(s)	501, 881, 1191, 1512, 1952, 2202
SduI	GDGCHC	4 cut(s)	43, 165, 786, 1972
SexAI	ACCWGGT	1 cut(s)	1189
SfaNI	GCATC	6 cut(s)	468, 618, 1313, 1441, 1477, 2171
SfcI	CTRYAG	2 cut(s)	993, 1791
SinI	GGWCC	3 cut(s)	194, 1316, 2419
SmiMI	CAYNNNNRTG	3 cut(s)	291, 525, 1623
SmlI	CTYRAG	2 cut(s)	983, 1542
SmoI	CTYRAG	2 cut(s)	983, 1542
SsiI	CCGC	8 cut(s)	409, 1153, 1873, 1984, 2078, 2099, 2103, 2412
SspMI	CTAG	5 cut(s)	687, 1109, 1169, 1611, 2013
SstI	GAGCTC	1 cut(s)	165
StyD4I	CCNGG	6 cut(s)	499, 879, 1189, 1510, 1950, 2200
StyI	CCWWGG	1 cut(s)	1780
TaaI	ACNGT	3 cut(s)	1264, 1409, 2122
TaiI	ACGT	2 cut(s)	1637, 1826
TaqI	TCGA	2 cut(s)	1136, 1300
TfiI	GAWTC	6 cut(s)	119, 415, 1016, 1888, 2269, 2396
TscAI	CASTG	2 cut(s)	204, 2212
TseFI	GTSAC	3 cut(s)	154, 822, 1211
TseI	GCWGC	8 cut(s)	143, 249, 517, 729, 811, 893, 1243, 1454
Tsp45I	GTSAC	3 cut(s)	154, 822, 1211
TspRI	CASTG	2 cut(s)	204, 2212
Van91I	CCANNNNNTGG	2 cut(s)	203, 1332
VpaK11BI	GGWCC	3 cut(s)	194, 1316, 2419
XagI	CCTNNNNNAGG	1 cut(s)	967
XapI	RAATTY	7 cut(s)	335, 931, 1339, 1426, 1658, 1910, 2450
XceI	RCATGY	3 cut(s)	1729, 2242, 2375
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2413
XmiI	GTMKAC	3 cut(s)	509, 645, 1259
XmnI	GAANNNNTTC	3 cut(s)	958, 2454, 2465
XspI	CTAG	5 cut(s)	687, 1109, 1169, 1611, 2013
Zsp2I	ATGCAT	3 cut(s)	357, 633, 2377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.