Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0011411

Physical Location & Seq

Genomic Coordinates Reverse (-)

30904216 .. 30908080

Gene Structure 3865 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1233200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGCTCGTGCTGTTCGAAACTCCGGCGGGTTTTGCCTTATTTAAAGTGTTGGATGAAGGGAAGCTCTCCAAAGTTGAGGACTTATGGAAGGATTTTTCAAGTGCAGATAAAGCTAGACAGGTTGTGAAACTGAAAGCTTTCTCCAAGTTTGAGAATACATCAGAAGCTTTGGAAGCGGCAACCCTGCTGATTGACAGTAAACCCAGCAAAGGTCTGCGCAAATTTTTGAAAGCGCACTGCAGTGGTGAGACGCTGGCTGTTTCCGATTCTAAGCTTGGAAATATAATTAAGGAAAAACTGAAAATAGACTGTGTTCACAACAATGCTGTGATGGAATTGATGAGAGGTGTAAGAGCTCAGTTGACTGAGCTCATAGCCGGTCTACAAGTTCAAGATTTGGCGCCAATGAGCTTGGGTTTATCTCACAGCTTATCTCGATTCAAGCTCAAGTTCAGTGCTGATAAGGTTGATACAATGGTGATTCAAGCCATTGGTTTGCTTGATGATCTTGATAAAGAGTTAAATACATATGCAATGAGGGTTCGAGAATGGTATGGCTGGCATTTTCCAGAGCTTGCTAAGATTGTACAGGACAACATCCTTTATGCCAAGGTAGTGAAGCTGATGGGCTACCGTTCTAATGCTGCAAAGCTTGATTTCTCCGAGATATTGCCAGAGGAGGTTGAAACTGAATTGAAGGATGCGGCAATGATATCCATGGGAACAGAAGTTAGTGAACTTGATTTGATGAACATCAAAGAACTCTGTGACCAAGTCCTTTCTCTCTCTGAGTACAGAGCTCAGCTATATGACTATTTGAAAAATAGGATGAACACCATTGCACCAAATTTGACTGCTCTTGTTGGAGAGCTCGTCGGTGCTCGCCTCATTTCCCATGGTGGTAGCTTGTTGAACCTTGCAAAGCAGCCTGGGAGCACAGTTCAGATTCTTGGAGCTGAAAAGGCCCTTTTCAGAGCACTGAAGACTAAGCACGCAACACCAAAATATGGACTTATCTACCATGCATCCTTGATTGGTAAAGCAGCGCCAAAGCTGAAGGGTAAAATTTCTCGGTCACTTGCTAGTAAAGCTGCATTGGCAATTCGAGTTGATGCTCTTGGAGACAGTCAAGATAACTCAATGGGAGTGGAAAATTATCAGAAGCTTGAAGCACGGTTAAGGAATCTTGAAGGCAGAGAATTGGGTCACTTTGCTGGGTCGGCTAAAGGCAAACCAAAGATTGAAGTCTATGACAAGGATCGCAAGAAGGGAGCCGCAGGATTGATAACTGCTGCCAAGGCATATAATCCTGCTGCAGATGCAGTTCTTGGGAAAACAACACCTTCTAATACTGAGAAACCAACTGCCGAGGTTCCTGTTACTGAAGATAAGAAAGAGAAGAAGAAAAAGAAGAAGAAGGCTGATGACGAGGACATGCCTGACGGAAATGCCAATGTGGAACCAGAAGTTGAGGAGCCTGCAAAGAAGGAAAAGAAGAAGAAGAAGAAGCATTCGGCTGAGGATGCTGAATTAGTTGCTGTGGTTGAAAATAAAGATGCGGGAGAGAAGAAGAGGAAAAGAAAGCATGCTGAGGAAGAAGAAACGGAGGTGCCAAGCGAGAAGAAAGAGAAAAAGAAGAAGAAGAAGAGCAAGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005732 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016072 GO:0022613 GO:0030515 GO:0030684 GO:0031428 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOP5NT Nop

Protein Analysis

553

Amino Acids

61.03

Weight (kDa)

9.19

Isoelectric Point (pI)

28.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NOP5NT	PF08156	2 - 65	1.5e-19	NOP5NT (NUC127) domain
Nop	PF01798	166 - 394	1.8e-86	snoRNA binding domain, fibrillarin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05060 AT5G27120
fragaria_vesca	FvH4_6g04090 FvH4_6g04090
malus_domestica	MD04G1216600.v1.1 MD12G1233200.v1.1
prunus_persica	Prupe.6G336300_v2.0.a1
pyrus_communis	pycom04g19260 pycom12g21570
rosa_chinensis	RchiOBHm_Chr3g0452641
rosa_laevigata	RLG00000025576
rosa_multiflora	Rmu_sc0022184.1_g000001
rosa_roxburghii	Rroxscaffold_6G00429680
rosa_rugosa	Rorug02G0642100 Rorug02G0642100
rosa_samantha	Rh3AG044500 Rh3BG046800 Rh3CG045300 Rh3DG045700
rosa_wichuraiana	Rw3G003470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	218
AccB1I	GGYRCC	2 cut(s)	400, 1609
AccB7I	CCANNNNNTGG	1 cut(s)	1007
AccI	GTMKAC	1 cut(s)	382
AciI	CCGC	5 cut(s)	26, 176, 704, 1275, 1559
AclWI	GGATC	1 cut(s)	1266
AcsI	RAATTY	3 cut(s)	221, 847, 1065
AcuI	CTGAAG	3 cut(s)	1001, 1076, 1404
AcyI	GRCGYC	1 cut(s)	401
AfaI	GTAC	2 cut(s)	588, 794
AfiI	CCNNNNNNNGG	2 cut(s)	209, 1007
AjnI	CCWGG	1 cut(s)	928
AleI	CACNNNNGTG	1 cut(s)	240
Alw21I	GWGCWC	7 cut(s)	358, 372, 802, 873, 883, 938, 979
Alw26I	GTCTC	2 cut(s)	242, 1116
AlwI	GGATC	1 cut(s)	1266
AoxI	GGCC	1 cut(s)	963
ApeKI	GCWGC	6 cut(s)	644, 925, 1043, 1091, 1292, 1313
ApoI	RAATTY	3 cut(s)	221, 847, 1065
Asp700I	GAANNNNTTC	1 cut(s)	137
AspLEI	GCGC	4 cut(s)	219, 235, 403, 1048
AspS9I	GGNCC	1 cut(s)	964
AsuHPI	GGTGA	2 cut(s)	257, 490
AsuII	TTCGAA	1 cut(s)	15
BaeI	ACNNNNGTAYC	2 cut(s)	462, 495
BanI	GGYRCC	2 cut(s)	400, 1609
BanII	GRGCYC	4 cut(s)	358, 372, 802, 873
BauI	CACGAG	1 cut(s)	5
BbsI	GAAGAC	1 cut(s)	989
Bbv12I	GWGCWC	7 cut(s)	358, 372, 802, 873, 883, 938, 979
BbvCI	CCTCAGC	2 cut(s)	1518, 1590
BbvI	GCAGC	6 cut(s)	631, 937, 1055, 1078, 1279, 1300
BccI	CCATC	2 cut(s)	325, 619
BciT130I	CCWGG	1 cut(s)	930
BcoDI	GTCTC	2 cut(s)	242, 1116
BfaI	CTAG	2 cut(s)	114, 1083
BfmI	CTRYAG	2 cut(s)	238, 1314
BfoI	RGCGCY	2 cut(s)	404, 1049
BisI	GCNGC	9 cut(s)	177, 645, 705, 926, 1044, 1092, 1275, 1293, 1314
BlpI	GCTNAGC	1 cut(s)	801
BlsI	GCNGC	9 cut(s)	178, 646, 706, 927, 1045, 1093, 1276, 1294, 1315
Bme1390I	CCNGG	1 cut(s)	930
BmgT120I	GGNCC	1 cut(s)	964
BmiI	GGNNCC	6 cut(s)	402, 1273, 1374, 1461, 1476, 1611
BmrFI	CCNGG	1 cut(s)	930
BmsI	GCATC	6 cut(s)	691, 1034, 1102, 1309, 1513, 1546
BpiI	GAAGAC	1 cut(s)	989
Bpu10I	CCTNAGC	2 cut(s)	1518, 1590
Bpu1102I	GCTNAGC	1 cut(s)	801
Bpu14I	TTCGAA	1 cut(s)	15
BpuEI	CTTGAG	1 cut(s)	431
BsaBI	GATNNNNATC	1 cut(s)	752
BsaHI	GRCGYC	1 cut(s)	401
BsaJI	CCNNGG	6 cut(s)	609, 717, 895, 929, 1296, 1368
BsaXI	ACNNNNNCTCC	2 cut(s)	858, 888
Bsc4I	CCNNNNNNNGG	2 cut(s)	209, 1007
Bse118I	RCCGGY	1 cut(s)	377
Bse3DI	GCAATG	3 cut(s)	540, 714, 837
Bse8I	GATNNNNATC	1 cut(s)	752
BseBI	CCWGG	1 cut(s)	930
BseDI	CCNNGG	6 cut(s)	609, 717, 895, 929, 1296, 1368
BseGI	GGATG	6 cut(s)	58, 597, 706, 834, 1025, 1528
BseJI	GATNNNNATC	1 cut(s)	752
BseLI	CCNNNNNNNGG	2 cut(s)	209, 1007
BseMI	GCAATG	3 cut(s)	540, 714, 837
BseMII	CTCAG	7 cut(s)	357, 371, 780, 815, 1344, 1509, 1581
BseRI	GAGGAG	2 cut(s)	692, 1487
BseXI	GCAGC	6 cut(s)	631, 937, 1055, 1078, 1279, 1300
BseYI	CCCAGC	2 cut(s)	203, 1214
BsgI	GTGCAG	1 cut(s)	123
BshFI	GGCC	1 cut(s)	965
BshNI	GGYRCC	2 cut(s)	400, 1609
BsiHKAI	GWGCWC	7 cut(s)	358, 372, 802, 873, 883, 938, 979
BsiSI	CCGG	2 cut(s)	23, 378
BslI	CCNNNNNNNGG	2 cut(s)	209, 1007
BsmAI	GTCTC	2 cut(s)	242, 1116
BsmBI	CGTCTC	1 cut(s)	242
BsmI	GAATGC	1 cut(s)	1510
BsnI	GGCC	1 cut(s)	965
Bsp119I	TTCGAA	1 cut(s)	15
Bsp1286I	GDGCHC	7 cut(s)	358, 372, 802, 873, 883, 938, 979
Bsp1407I	TGTACA	1 cut(s)	586
Bsp143I	GATC	2 cut(s)	505, 1258
Bsp1720I	GCTNAGC	1 cut(s)	801
Bsp19I	CCATGG	2 cut(s)	717, 895
BspACI	CCGC	5 cut(s)	26, 176, 704, 1275, 1559
BspANI	GGCC	1 cut(s)	965
BspCNI	CTCAG	7 cut(s)	358, 370, 781, 814, 1345, 1510, 1582
BspLI	GGNNCC	6 cut(s)	402, 1273, 1374, 1461, 1476, 1611
BspMAI	CTGCAG	2 cut(s)	242, 1318
BspPI	GGATC	1 cut(s)	1266
BspQI	GCTCTTC	1 cut(s)	1640
BspT104I	TTCGAA	1 cut(s)	15
BspT107I	GGYRCC	2 cut(s)	400, 1609
BsrDI	GCAATG	3 cut(s)	540, 714, 837
BsrFI	RCCGGY	1 cut(s)	377
BsrGI	TGTACA	1 cut(s)	586
BssAI	RCCGGY	1 cut(s)	377
BssECI	CCNNGG	6 cut(s)	609, 717, 895, 929, 1296, 1368
BssMI	GATC	2 cut(s)	505, 1258
BssNI	GRCGYC	1 cut(s)	401
BssSI	CACGAG	1 cut(s)	5
BssT1I	CCWWGG	4 cut(s)	609, 717, 895, 1296
Bst2BI	CACGAG	1 cut(s)	5
Bst2UI	CCWGG	1 cut(s)	930
Bst4CI	ACNGT	6 cut(s)	197, 311, 635, 940, 1127, 1176
Bst6I	CTCTTC	2 cut(s)	1565, 1640
BstACI	GRCGYC	1 cut(s)	401
BstAUI	TGTACA	1 cut(s)	586
BstBI	TTCGAA	1 cut(s)	15
BstC8I	GCNNGC	7 cut(s)	255, 560, 576, 883, 993, 1479, 1587
BstDSI	CCRYGG	2 cut(s)	717, 895
BstF5I	GGATG	6 cut(s)	58, 597, 706, 834, 1025, 1528
BstH2I	RGCGCY	2 cut(s)	404, 1049
BstHHI	GCGC	4 cut(s)	219, 235, 403, 1048
BstKTI	GATC	2 cut(s)	508, 1261
BstMAI	GTCTC	2 cut(s)	242, 1116
BstMBI	GATC	2 cut(s)	505, 1258
BstNI	CCWGG	1 cut(s)	930
BstNSI	RCATGY	2 cut(s)	1438, 1589
BstSCI	CCNGG	1 cut(s)	928
BstSFI	CTRYAG	2 cut(s)	238, 1314
BstV1I	GCAGC	6 cut(s)	631, 937, 1055, 1078, 1279, 1300
BstV2I	GAAGAC	1 cut(s)	989
BsuRI	GGCC	1 cut(s)	965
BtgI	CCRYGG	2 cut(s)	717, 895
BtsCI	GGATG	6 cut(s)	58, 597, 706, 834, 1025, 1528
BtsI	GCAGTG	2 cut(s)	235, 247
BtsIMutI	CAGTG	4 cut(s)	235, 247, 460, 977
Cac8I	GCNNGC	7 cut(s)	255, 560, 576, 883, 993, 1479, 1587
CfoI	GCGC	4 cut(s)	219, 235, 403, 1048
Cfr10I	RCCGGY	1 cut(s)	377
Cfr13I	GGNCC	1 cut(s)	964
CseI	GACGC	1 cut(s)	259
Csp6I	GTAC	2 cut(s)	587, 793
CspCI	CAANNNNNGTGG	2 cut(s)	1128, 1163
CviAII	CATG	5 cut(s)	718, 896, 1022, 1435, 1586
CviQI	GTAC	2 cut(s)	587, 793
DinI	GGCGCC	1 cut(s)	402
DpnI	GATC	2 cut(s)	507, 1260
DpnII	GATC	2 cut(s)	505, 1258
DraI	TTTAAA	1 cut(s)	43
Eam1104I	CTCTTC	2 cut(s)	1565, 1640
EarI	CTCTTC	2 cut(s)	1565, 1640
Ecl136II	GAGCTC	4 cut(s)	356, 370, 800, 871
Eco130I	CCWWGG	4 cut(s)	609, 717, 895, 1296
Eco24I	GRGCYC	4 cut(s)	358, 372, 802, 873
Eco32I	GATATC	1 cut(s)	714
Eco53kI	GAGCTC	4 cut(s)	356, 370, 800, 871
Eco57I	CTGAAG	3 cut(s)	1001, 1076, 1404
EcoICRI	GAGCTC	4 cut(s)	356, 370, 800, 871
EcoO109I	RGGNCCY	1 cut(s)	964
EcoRII	CCWGG	1 cut(s)	928
EcoRV	GATATC	1 cut(s)	714
EcoT14I	CCWWGG	4 cut(s)	609, 717, 895, 1296
EcoT22I	ATGCAT	1 cut(s)	1027
EcoT38I	GRGCYC	4 cut(s)	358, 372, 802, 873
EgeI	GGCGCC	1 cut(s)	402
EheI	GGCGCC	1 cut(s)	402
ErhI	CCWWGG	4 cut(s)	609, 717, 895, 1296
Esp3I	CGTCTC	1 cut(s)	242
FaeI	CATG	5 cut(s)	721, 899, 1025, 1438, 1589
FatI	CATG	5 cut(s)	717, 895, 1021, 1434, 1585
FauI	CCCGC	2 cut(s)	19, 1552
FauNDI	CATATG	1 cut(s)	529
FblI	GTMKAC	1 cut(s)	382
Fnu4HI	GCNGC	9 cut(s)	177, 645, 705, 926, 1044, 1092, 1275, 1293, 1314
FokI	GGATG	6 cut(s)	65, 584, 713, 841, 1012, 1535
FriOI	GRGCYC	4 cut(s)	358, 372, 802, 873
Fsp4HI	GCNGC	9 cut(s)	177, 645, 705, 926, 1044, 1092, 1275, 1293, 1314
FspBI	CTAG	2 cut(s)	114, 1083
FspI	TGCGCA	1 cut(s)	218
GlaI	GCGC	4 cut(s)	218, 234, 402, 1047
GluI	GCNGC	9 cut(s)	177, 645, 705, 926, 1044, 1092, 1275, 1293, 1314
GsaI	CCCAGC	2 cut(s)	207, 1218
HaeII	RGCGCY	2 cut(s)	404, 1049
HaeIII	GGCC	1 cut(s)	965
HapII	CCGG	2 cut(s)	23, 378
HgaI	GACGC	1 cut(s)	259
HhaI	GCGC	4 cut(s)	219, 235, 403, 1048
Hin1I	GRCGYC	1 cut(s)	401
Hin1II	CATG	5 cut(s)	721, 899, 1025, 1438, 1589
Hin6I	GCGC	4 cut(s)	217, 233, 401, 1046
HinP1I	GCGC	4 cut(s)	217, 233, 401, 1046
HincII	GTYRAC	1 cut(s)	363
HindII	GTYRAC	1 cut(s)	363
HindIII	AAGCTT	5 cut(s)	135, 165, 272, 650, 1163
HinfI	GANTC	5 cut(s)	266, 438, 481, 946, 1183
HpaII	CCGG	2 cut(s)	23, 378
HphI	GGTGA	2 cut(s)	257, 490
Hpy166II	GTNNAC	5 cut(s)	200, 316, 363, 383, 737
Hpy188I	TCNGA	7 cut(s)	163, 265, 664, 790, 945, 974, 1161
Hpy188III	TCNNGA	7 cut(s)	392, 435, 509, 545, 569, 1130, 1187
Hpy8I	GTNNAC	5 cut(s)	200, 316, 363, 383, 737
Hpy99I	CGWCG	1 cut(s)	878
HpyAV	CCTTC	9 cut(s)	50, 82, 691, 1051, 1184, 1261, 1353, 1411, 1480
HpyCH4III	ACNGT	6 cut(s)	197, 311, 635, 940, 1127, 1176
Hsp92I	GRCGYC	1 cut(s)	401
Hsp92II	CATG	5 cut(s)	721, 899, 1025, 1438, 1589
HspAI	GCGC	4 cut(s)	217, 233, 401, 1046
KasI	GGCGCC	1 cut(s)	400
Kzo9I	GATC	2 cut(s)	505, 1258
LguI	GCTCTTC	1 cut(s)	1640
LmnI	GCTCC	4 cut(s)	933, 953, 1271, 1474
Lsp1109I	GCAGC	6 cut(s)	631, 937, 1055, 1078, 1279, 1300
LweI	GCATC	6 cut(s)	691, 1034, 1102, 1309, 1513, 1546
MaeI	CTAG	2 cut(s)	114, 1083
MaeIII	GTNAC	4 cut(s)	767, 1074, 1205, 1378
MalI	GATC	2 cut(s)	507, 1260
MboI	GATC	2 cut(s)	505, 1258
MhlI	GDGCHC	7 cut(s)	358, 372, 802, 873, 883, 938, 979
Mly113I	GGCGCC	1 cut(s)	401
MmeI	TCCRAC	2 cut(s)	30, 844
Mph1103I	ATGCAT	1 cut(s)	1027
MroXI	GAANNNNTTC	1 cut(s)	137
MseI	TTAA	4 cut(s)	42, 288, 521, 1178
MslI	CAYNNNNRTG	2 cut(s)	240, 321
MspI	CCGG	2 cut(s)	23, 378
MspR9I	CCNGG	1 cut(s)	930
Mva1269I	GAATGC	1 cut(s)	1510
MvaI	CCWGG	1 cut(s)	930
NarI	GGCGCC	1 cut(s)	401
NcoI	CCATGG	2 cut(s)	717, 895
NdeI	CATATG	1 cut(s)	529
NdeII	GATC	2 cut(s)	505, 1258
NlaIII	CATG	5 cut(s)	721, 899, 1025, 1438, 1589
NlaIV	GGNNCC	6 cut(s)	402, 1273, 1374, 1461, 1476, 1611
NmeAIII	GCCGAG	1 cut(s)	1393
NmuCI	GTSAC	3 cut(s)	767, 1074, 1205
NsbI	TGCGCA	1 cut(s)	218
NsiI	ATGCAT	1 cut(s)	1027
NspI	RCATGY	2 cut(s)	1438, 1589
NspV	TTCGAA	1 cut(s)	15
OliI	CACNNNNGTG	1 cut(s)	240
PaeI	GCATGC	1 cut(s)	1589
PciSI	GCTCTTC	1 cut(s)	1640
PcsI	WCGNNNNNNNCGW	1 cut(s)	12
PctI	GAATGC	1 cut(s)	1510
PdmI	GAANNNNTTC	1 cut(s)	137
PfeI	GAWTC	5 cut(s)	266, 438, 481, 946, 1183
PflFI	GACNNNGTC	1 cut(s)	773
PflMI	CCANNNNNTGG	1 cut(s)	1007
PkrI	GCNGC	9 cut(s)	178, 646, 706, 927, 1045, 1093, 1276, 1294, 1315
PluTI	GGCGCC	1 cut(s)	404
Psp124BI	GAGCTC	4 cut(s)	358, 372, 802, 873
Psp6I	CCWGG	1 cut(s)	928
PspFI	CCCAGC	2 cut(s)	203, 1214
PspGI	CCWGG	1 cut(s)	928
PspN4I	GGNNCC	6 cut(s)	402, 1273, 1374, 1461, 1476, 1611
PspPI	GGNCC	1 cut(s)	964
PstI	CTGCAG	2 cut(s)	242, 1318
PsyI	GACNNNGTC	1 cut(s)	773
RsaI	GTAC	2 cut(s)	588, 794
RsaNI	GTAC	2 cut(s)	587, 793
RseI	CAYNNNNRTG	2 cut(s)	240, 321
SacI	GAGCTC	4 cut(s)	358, 372, 802, 873
SapI	GCTCTTC	1 cut(s)	1640
SaqAI	TTAA	4 cut(s)	42, 288, 521, 1178
SatI	GCNGC	9 cut(s)	177, 645, 705, 926, 1044, 1092, 1275, 1293, 1314
Sau3AI	GATC	2 cut(s)	505, 1258
Sau96I	GGNCC	1 cut(s)	964
ScrFI	CCNGG	1 cut(s)	930
SduI	GDGCHC	7 cut(s)	358, 372, 802, 873, 883, 938, 979
SfaNI	GCATC	6 cut(s)	691, 1034, 1102, 1309, 1513, 1546
SfcI	CTRYAG	2 cut(s)	238, 1314
SfoI	GGCGCC	1 cut(s)	402
SfuI	TTCGAA	1 cut(s)	15
SmiMI	CAYNNNNRTG	2 cut(s)	240, 321
SmlI	CTYRAG	1 cut(s)	446
SmoI	CTYRAG	1 cut(s)	446
SphI	GCATGC	1 cut(s)	1589
SsiI	CCGC	5 cut(s)	26, 176, 704, 1275, 1559
SspDI	GGCGCC	1 cut(s)	400
SspMI	CTAG	2 cut(s)	114, 1083
SstI	GAGCTC	4 cut(s)	358, 372, 802, 873
StyD4I	CCNGG	1 cut(s)	928
StyI	CCWWGG	4 cut(s)	609, 717, 895, 1296
TaaI	ACNGT	6 cut(s)	197, 311, 635, 940, 1127, 1176
TaqI	TCGA	4 cut(s)	15, 436, 544, 1105
TaqII	GACCGA	1 cut(s)	1062
TatI	WGTACW	2 cut(s)	586, 792
TauI	GCSGC	3 cut(s)	179, 707, 1277
TfiI	GAWTC	5 cut(s)	266, 438, 481, 946, 1183
Tru1I	TTAA	4 cut(s)	42, 288, 521, 1178
Tru9I	TTAA	4 cut(s)	42, 288, 521, 1178
TscAI	CASTG	4 cut(s)	242, 247, 460, 984
TseFI	GTSAC	3 cut(s)	767, 1074, 1205
TseI	GCWGC	6 cut(s)	644, 925, 1043, 1091, 1292, 1313
Tsp45I	GTSAC	3 cut(s)	767, 1074, 1205
TspDTI	ATGAA	3 cut(s)	69, 764, 845
TspGWI	ACGGA	2 cut(s)	1458, 1619
TspRI	CASTG	4 cut(s)	242, 247, 460, 984
Tth111I	GACNNNGTC	1 cut(s)	773
Van91I	CCANNNNNTGG	1 cut(s)	1007
XapI	RAATTY	3 cut(s)	221, 847, 1065
XceI	RCATGY	2 cut(s)	1438, 1589
XmiI	GTMKAC	1 cut(s)	382
XmnI	GAANNNNTTC	1 cut(s)	137
XspI	CTAG	2 cut(s)	114, 1083
Zsp2I	ATGCAT	1 cut(s)	1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.