Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0013258

Physical Location & Seq

Genomic Coordinates Reverse (-)

6884730 .. 6886970

Gene Structure 2241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1097100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGCGCTGCAACAGTTCGGGCGCACGAAGAGCGTGACGAAGCGGTCGAGCAAGTACTTGGAGGAGGCTCTGTACCTGAGGCTGTTCAAGGACGGCGGCTCGGAGGTGAGCGTTCGACAGCAGCTCAATGAAGTTCTCAAGAGCCGCAAGCGAGTTTACAAATGGGAGGTCGGCGACACCCTCAAGAAGCTTCGCGAACGCAAGCTATACTACCCTGCCCTCAAGCTATCGGAAGCTATGGATAGAAGAGGAATGAACAAGACAGTCAGTGATCAGGCAATGCATCTTGATCTTGTTGCTAAAGCCCGAGGTATTCCTGCTGCGGAAAATTATTTCATTGATCTTCCTGAATCAGCAAAGACCCATCTCTGTTATGGTGCCCTGCTCAACTGTTACTGTAAGGAATGGATGACTGAAAAAGCCGAAGCCCTCATAGAAAAGATGAAGGCTCTTAACCTTCCATTAACCTCCATGCCTTATAACAGCCTTATGACCCTTTACTCAAAAACTGGAAAGCCGGATAAGATCCCAGCCATCATACAAGAAATGAAGGCCTGTAATGTCATGCTTGATTCCTATTCATACAATGTCTGGATGCGGGCACTTGCTTCTGTTAATGATATTTCTGGGGCTGAAAGGGTTATTGATGAGATGAAGAGGGATGGTCGAGTTGCCAGTGATTGGACCACGTATAGCAACTTAGCTTCAATTTTTGTTGAAGCCGGCATGTTTGAGAAGGCAGAAAATGCGCTCAAAGAATTGGAGAAGAAAAATTCGAGCCGAGATCTTTTTGCTTTCCAATTCCTCATTACATTGTATGGTAAAACAGGGAACCTACGTGAAGTTTATCGGGTATGGCGTTCCTTGAGGCTGGCTTTCCCCAAGACTGCAAATGTCAGTTATCTGAATATGATTCAGGTCTTGGTCAACTTGAATGATGTACCGGGTGCAGAGAAAACTTTCAGGGACTGGGAATGTCAGTGCTCAACATATGATATTCGGGTAGCAAATGTGTTGATTGGAGCTTATGCTGAACAGGGTATGCTAGAGAAGGCGAAGGAGCTCAAGGAGGTGGCCCGCCGGAGAGGAGCCAAGCCTAATGCAACAAGCTGGGAGATCTTTCTGGATTATTATCTGAAGTCTGGAGAATATCAGTTGGCAGTTGATTGTGTTGCCAGTGCGATATCCATTGGTAGAGGGGATGGTAAGAAGTGGAGTCCATCAAATAAGATTGTCAAAACCTTGATGGAGCATTTCGAGCAAGAGAAGGATGTTGATGGCGCAGAAGGTTTTCTTGAGATTCTGAAGAAGTCCGTAGAATCCTTAGGGGTTGATGTGTTTGAATCATTGATCAGAACTTATGCTGCTGCTGGAAGGACGAGTCCTGCTATGCGTGCTCGTTTGAAAATGGAGAAATTGGAGGTGAGTGAAGCCAGTAAAAAGTTGCTCGAGGCCGTATGTGTGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

490

Amino Acids

55.55

Weight (kDa)

9.04

Isoelectric Point (pI)

33.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	160 - 203	1.6e-07	PPR repeat family
TPR_24	PF23276	168 - 288	1.1e-06	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60770
fragaria_vesca	FvH4_4g12450
malus_domestica	MD13G1097100.v1.1 MD16G1098000.v1.1
prunus_persica	Prupe.1G248500_v2.0.a1
pyrus_communis	pycom13g08480 pycom16g08350
rosa_chinensis	RchiOBHm_Chr4g0410731
rosa_laevigata	RLG00000008406
rosa_multiflora	Rmu_sc0001967.1_g000008 Rmu_ssc0000072.1_g000002
rosa_roxburghii	Rroxscaffold_5G00355480
rosa_rugosa	Rorug04G0111500
rosa_samantha	Rh4AG162600 Rh4BG161400 Rh4CG175500 Rh4DG158200
rosa_wichuraiana	Rw4G013540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	480
AasI	GACNNNNNNGTC	1 cut(s)	43
AccB1I	GGYRCC	1 cut(s)	377
AccB7I	CCANNNNNTGG	1 cut(s)	681
AccII	CGCG	1 cut(s)	195
AciI	CCGC	6 cut(s)	43, 96, 145, 323, 598, 1078
AclWI	GGATC	1 cut(s)	520
AcsI	RAATTY	1 cut(s)	772
AcuI	CTGAAG	2 cut(s)	1157, 1325
AfaI	GTAC	3 cut(s)	56, 74, 942
AfiI	CCNNNNNNNGG	1 cut(s)	681
AgsI	TTSAA	6 cut(s)	88, 708, 719, 934, 1343, 1405
AluBI	AGCT	9 cut(s)	124, 190, 205, 226, 236, 704, 1025, 1063, 1110
AluI	AGCT	9 cut(s)	124, 190, 205, 226, 236, 704, 1025, 1063, 1110
Alw21I	GWGCWC	3 cut(s)	986, 1065, 1399
AlwI	GGATC	1 cut(s)	520
AlwNI	CAGNNNCTG	1 cut(s)	969
Ama87I	CYCGRG	2 cut(s)	306, 1448
AoxI	GGCC	3 cut(s)	552, 1074, 1452
ApeKI	GCWGC	5 cut(s)	7, 121, 320, 1364, 1367
ApoI	RAATTY	1 cut(s)	772
ArsI	GACNNNNNNTTYG	2 cut(s)	153, 185
Asp700I	GAANNNNTTC	2 cut(s)	959, 1290
AspLEI	GCGC	4 cut(s)	7, 24, 751, 1283
AspS9I	GGNCC	2 cut(s)	684, 1075
AsuC2I	CCSGG	1 cut(s)	945
AsuHPI	GGTGA	2 cut(s)	118, 1435
AvaI	CYCGRG	2 cut(s)	306, 1448
AvaII	GGWCC	1 cut(s)	684
AxyI	CCTNAGG	2 cut(s)	77, 1324
BaeGI	GKGCMC	2 cut(s)	382, 604
BanI	GGYRCC	1 cut(s)	377
BanII	GRGCYC	1 cut(s)	1065
Bbv12I	GWGCWC	3 cut(s)	986, 1065, 1399
BbvI	GCAGC	4 cut(s)	133, 307, 1351, 1354
BccI	CCATC	7 cut(s)	372, 542, 656, 1196, 1228, 1240, 1271
BceAI	ACGGC	2 cut(s)	109, 1439
BclI	TGATCA	2 cut(s)	271, 1350
BcnI	CCSGG	1 cut(s)	945
BfaI	CTAG	1 cut(s)	1046
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	2 cut(s)	784, 1116
BisI	GCNGC	7 cut(s)	8, 97, 122, 145, 321, 1365, 1368
BlsI	GCNGC	7 cut(s)	9, 98, 123, 146, 322, 1366, 1369
BmcAI	AGTACT	1 cut(s)	56
Bme1390I	CCNGG	1 cut(s)	945
Bme18I	GGWCC	1 cut(s)	684
BmeT110I	CYCGRG	2 cut(s)	306, 1448
BmgT120I	GGNCC	2 cut(s)	684, 1075
BmiI	GGNNCC	3 cut(s)	379, 833, 1090
BmrFI	CCNGG	1 cut(s)	945
BmrI	ACTGGG	1 cut(s)	979
BmsI	GCATC	2 cut(s)	292, 585
BmuI	ACTGGG	1 cut(s)	979
BpmI	CTGGAG	1 cut(s)	1164
BpuEI	CTTGAG	6 cut(s)	122, 167, 206, 886, 1049, 1316
BpuMI	CCSGG	1 cut(s)	945
BsaAI	YACGTR	2 cut(s)	690, 839
BsaBI	GATNNNNATC	1 cut(s)	1131
BsaJI	CCNNGG	1 cut(s)	307
BsaXI	ACNNNNNCTCC	2 cut(s)	56, 86
Bsc4I	CCNNNNNNNGG	1 cut(s)	681
Bse118I	RCCGGY	1 cut(s)	722
Bse1I	ACTGG	5 cut(s)	514, 675, 974, 1176, 1434
Bse21I	CCTNAGG	2 cut(s)	77, 1324
Bse3DI	GCAATG	1 cut(s)	285
Bse8I	GATNNNNATC	1 cut(s)	1131
BseDI	CCNNGG	1 cut(s)	307
BseGI	GGATG	5 cut(s)	414, 600, 667, 1207, 1276
BseJI	GATNNNNATC	1 cut(s)	1131
BseLI	CCNNNNNNNGG	1 cut(s)	681
BseMI	GCAATG	1 cut(s)	285
BseMII	CTCAG	1 cut(s)	68
BseNI	ACTGG	5 cut(s)	514, 675, 974, 1176, 1434
BseRI	GAGGAG	2 cut(s)	77, 1101
BseSI	GKGCMC	2 cut(s)	382, 604
BseXI	GCAGC	4 cut(s)	133, 307, 1351, 1354
BseYI	CCCAGC	2 cut(s)	529, 1110
BsgI	GTGCAG	1 cut(s)	969
Bsh1236I	CGCG	1 cut(s)	195
Bsh1285I	CGRYCG	1 cut(s)	47
BshFI	GGCC	3 cut(s)	554, 1076, 1454
BshNI	GGYRCC	1 cut(s)	377
BsiEI	CGRYCG	1 cut(s)	47
BsiHKAI	GWGCWC	3 cut(s)	986, 1065, 1399
BsiHKCI	CYCGRG	2 cut(s)	306, 1448
BsiSI	CCGG	4 cut(s)	518, 723, 944, 1081
BslFI	GGGAC	1 cut(s)	980
BslI	CCNNNNNNNGG	1 cut(s)	681
BsmFI	GGGAC	1 cut(s)	980
BsnI	GGCC	3 cut(s)	554, 1076, 1454
BsoBI	CYCGRG	2 cut(s)	306, 1448
Bsp1286I	GDGCHC	5 cut(s)	382, 604, 986, 1065, 1399
Bsp143I	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
Bsp68I	TCGCGA	1 cut(s)	195
BspACI	CCGC	6 cut(s)	43, 96, 145, 323, 598, 1078
BspANI	GGCC	3 cut(s)	554, 1076, 1454
BspCNI	CTCAG	1 cut(s)	69
BspFNI	CGCG	1 cut(s)	195
BspLI	GGNNCC	3 cut(s)	379, 833, 1090
BspPI	GGATC	1 cut(s)	520
BspQI	GCTCTTC	1 cut(s)	23
BspT107I	GGYRCC	1 cut(s)	377
BsrDI	GCAATG	1 cut(s)	285
BsrFI	RCCGGY	1 cut(s)	722
BsrI	ACTGG	5 cut(s)	514, 675, 974, 1176, 1434
BssAI	RCCGGY	1 cut(s)	722
BssECI	CCNNGG	1 cut(s)	307
BssMI	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
Bst4CI	ACNGT	4 cut(s)	15, 265, 392, 398
Bst6I	CTCTTC	3 cut(s)	23, 241, 650
BstAPI	GCANNNNNTGC	1 cut(s)	746
BstBAI	YACGTR	2 cut(s)	690, 839
BstC8I	GCNNGC	7 cut(s)	149, 203, 600, 724, 873, 1078, 1395
BstDEI	CTNAG	3 cut(s)	77, 700, 1324
BstF5I	GGATG	5 cut(s)	414, 600, 667, 1207, 1276
BstFNI	CGCG	1 cut(s)	195
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	4 cut(s)	7, 24, 751, 1283
BstKTI	GATC	7 cut(s)	274, 292, 343, 528, 787, 1119, 1353
BstMBI	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
BstMCI	CGRYCG	1 cut(s)	47
BstMWI	GCNNNNNNNGC	4 cut(s)	30, 746, 1258, 1394
BstNSI	RCATGY	1 cut(s)	730
BstSCI	CCNGG	1 cut(s)	943
BstSLI	GKGCMC	2 cut(s)	382, 604
BstUI	CGCG	1 cut(s)	195
BstV1I	GCAGC	4 cut(s)	133, 307, 1351, 1354
BstX2I	RGATCY	3 cut(s)	525, 784, 1116
BstYI	RGATCY	3 cut(s)	525, 784, 1116
Bsu36I	CCTNAGG	2 cut(s)	77, 1324
BsuRI	GGCC	3 cut(s)	554, 1076, 1454
BtsCI	GGATG	5 cut(s)	414, 600, 667, 1207, 1276
BtsIMutI	CAGTG	4 cut(s)	274, 682, 986, 1183
BtuMI	TCGCGA	1 cut(s)	195
Cac8I	GCNNGC	7 cut(s)	149, 203, 600, 724, 873, 1078, 1395
CaiI	CAGNNNCTG	1 cut(s)	969
CfoI	GCGC	4 cut(s)	7, 24, 751, 1283
Cfr10I	RCCGGY	1 cut(s)	722
Cfr13I	GGNCC	2 cut(s)	684, 1075
Csp6I	GTAC	3 cut(s)	55, 73, 941
CviAII	CATG	3 cut(s)	472, 565, 727
CviQI	GTAC	3 cut(s)	55, 73, 941
DdeI	CTNAG	3 cut(s)	77, 700, 1324
DpnI	GATC	7 cut(s)	273, 291, 342, 527, 786, 1118, 1352
DpnII	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
DrdI	GACNNNNNNGTC	1 cut(s)	43
DseDI	GACNNNNNNGTC	1 cut(s)	43
Eam1104I	CTCTTC	3 cut(s)	23, 241, 650
EarI	CTCTTC	3 cut(s)	23, 241, 650
Ecl136II	GAGCTC	1 cut(s)	1063
Eco147I	AGGCCT	1 cut(s)	554
Eco24I	GRGCYC	1 cut(s)	1065
Eco32I	GATATC	1 cut(s)	1185
Eco47I	GGWCC	1 cut(s)	684
Eco53kI	GAGCTC	1 cut(s)	1063
Eco57I	CTGAAG	2 cut(s)	1157, 1325
Eco81I	CCTNAGG	2 cut(s)	77, 1324
Eco88I	CYCGRG	2 cut(s)	306, 1448
EcoICRI	GAGCTC	1 cut(s)	1063
EcoRV	GATATC	1 cut(s)	1185
EcoT22I	ATGCAT	1 cut(s)	285
EcoT38I	GRGCYC	1 cut(s)	1065
FaeI	CATG	3 cut(s)	475, 568, 730
FalI	AAGNNNNNCTT	2 cut(s)	1278, 1310
FaqI	GGGAC	1 cut(s)	980
FatI	CATG	3 cut(s)	471, 564, 726
FauI	CCCGC	2 cut(s)	591, 1085
FauNDI	CATATG	1 cut(s)	991
FbaI	TGATCA	2 cut(s)	271, 1350
Fnu4HI	GCNGC	7 cut(s)	8, 97, 122, 145, 321, 1365, 1368
FokI	GGATG	5 cut(s)	421, 607, 674, 1214, 1283
FriOI	GRGCYC	1 cut(s)	1065
Fsp4HI	GCNGC	7 cut(s)	8, 97, 122, 145, 321, 1365, 1368
FspBI	CTAG	1 cut(s)	1046
GlaI	GCGC	4 cut(s)	6, 23, 750, 1282
GluI	GCNGC	7 cut(s)	8, 97, 122, 145, 321, 1365, 1368
GsaI	CCCAGC	2 cut(s)	533, 1114
GsuI	CTGGAG	1 cut(s)	1164
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	554, 1076, 1454
HapII	CCGG	4 cut(s)	518, 723, 944, 1081
HhaI	GCGC	4 cut(s)	7, 24, 751, 1283
Hin1II	CATG	3 cut(s)	475, 568, 730
Hin6I	GCGC	4 cut(s)	5, 22, 749, 1281
HinP1I	GCGC	4 cut(s)	5, 22, 749, 1281
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HindIII	AAGCTT	1 cut(s)	188
HinfI	GANTC	8 cut(s)	350, 572, 913, 1216, 1300, 1319, 1343, 1381
HpaII	CCGG	4 cut(s)	518, 723, 944, 1081
HphI	GGTGA	2 cut(s)	118, 1435
Hpy166II	GTNNAC	2 cut(s)	157, 928
Hpy188I	TCNGA	6 cut(s)	103, 232, 906, 1137, 1305, 1355
Hpy188III	TCNNGA	9 cut(s)	139, 184, 194, 287, 347, 592, 1124, 1143, 1295
Hpy8I	GTNNAC	2 cut(s)	157, 928
HpyAV	CCTTC	9 cut(s)	439, 467, 544, 730, 1045, 1051, 1261, 1280, 1368
HpyCH4III	ACNGT	4 cut(s)	15, 265, 392, 398
HpyCH4IV	ACGT	2 cut(s)	689, 838
HpyCH4V	TGCA	5 cut(s)	10, 283, 890, 950, 1103
HpyF10VI	GCNNNNNNNGC	4 cut(s)	30, 746, 1258, 1394
HpyF3I	CTNAG	3 cut(s)	77, 700, 1324
HpySE526I	ACGT	2 cut(s)	689, 838
Hsp92II	CATG	3 cut(s)	475, 568, 730
HspAI	GCGC	4 cut(s)	5, 22, 749, 1281
KroI	GCCGGC	1 cut(s)	722
KroNI	GCCGGC	1 cut(s)	724
Ksp22I	TGATCA	2 cut(s)	271, 1350
Kzo9I	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
LguI	GCTCTTC	1 cut(s)	23
LmnI	GCTCC	4 cut(s)	1022, 1060, 1088, 1249
Lsp1109I	GCAGC	4 cut(s)	133, 307, 1351, 1354
LweI	GCATC	2 cut(s)	292, 585
MaeI	CTAG	1 cut(s)	1046
MaeII	ACGT	2 cut(s)	689, 838
MaeIII	GTNAC	2 cut(s)	34, 392
MalI	GATC	7 cut(s)	273, 291, 342, 527, 786, 1118, 1352
MboI	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
MboII	GAAGA	6 cut(s)	40, 258, 335, 667, 778, 1318
MflI	RGATCY	3 cut(s)	525, 784, 1116
MhlI	GDGCHC	5 cut(s)	382, 604, 986, 1065, 1399
MluCI	AATT	6 cut(s)	328, 708, 758, 772, 800, 1415
MlyI	GAGTC	2 cut(s)	1225, 1390
Mph1103I	ATGCAT	1 cut(s)	285
MroNI	GCCGGC	1 cut(s)	722
MroXI	GAANNNNTTC	2 cut(s)	959, 1290
MseI	TTAA	3 cut(s)	453, 464, 615
MspI	CCGG	4 cut(s)	518, 723, 944, 1081
MspR9I	CCNGG	1 cut(s)	945
MvnI	CGCG	1 cut(s)	195
MwoI	GCNNNNNNNGC	4 cut(s)	30, 746, 1258, 1394
NaeI	GCCGGC	1 cut(s)	724
NciI	CCSGG	1 cut(s)	945
NdeI	CATATG	1 cut(s)	991
NdeII	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
NgoMIV	GCCGGC	1 cut(s)	722
NlaIII	CATG	3 cut(s)	475, 568, 730
NlaIV	GGNNCC	3 cut(s)	379, 833, 1090
NmeAIII	GCCGAG	1 cut(s)	806
NmuCI	GTSAC	1 cut(s)	34
NruI	TCGCGA	1 cut(s)	195
NsiI	ATGCAT	1 cut(s)	285
NspI	RCATGY	1 cut(s)	730
PaeR7I	CTCGAG	1 cut(s)	1448
PceI	AGGCCT	1 cut(s)	554
PciSI	GCTCTTC	1 cut(s)	23
PcsI	WCGNNNNNNNCGW	2 cut(s)	44, 856
PdiI	GCCGGC	1 cut(s)	724
PdmI	GAANNNNTTC	2 cut(s)	959, 1290
PfeI	GAWTC	6 cut(s)	350, 572, 913, 1300, 1319, 1343
PflMI	CCANNNNNTGG	1 cut(s)	681
PkrI	GCNGC	7 cut(s)	9, 98, 123, 146, 322, 1366, 1369
PleI	GAGTC	2 cut(s)	1224, 1389
PpsI	GAGTC	2 cut(s)	1224, 1389
Ppu21I	YACGTR	2 cut(s)	690, 839
PsiI	TTATAA	1 cut(s)	480
Psp124BI	GAGCTC	1 cut(s)	1065
PspFI	CCCAGC	2 cut(s)	529, 1110
PspN4I	GGNNCC	3 cut(s)	379, 833, 1090
PspPI	GGNCC	2 cut(s)	684, 1075
PspXI	VCTCGAGB	1 cut(s)	1448
PstNI	CAGNNNCTG	1 cut(s)	969
PsuI	RGATCY	3 cut(s)	525, 784, 1116
RruI	TCGCGA	1 cut(s)	195
RsaI	GTAC	3 cut(s)	56, 74, 942
RsaNI	GTAC	3 cut(s)	55, 73, 941
SacI	GAGCTC	1 cut(s)	1065
SapI	GCTCTTC	1 cut(s)	23
SaqAI	TTAA	3 cut(s)	453, 464, 615
SatI	GCNGC	7 cut(s)	8, 97, 122, 145, 321, 1365, 1368
Sau3AI	GATC	7 cut(s)	271, 289, 340, 525, 784, 1116, 1350
Sau96I	GGNCC	2 cut(s)	684, 1075
ScaI	AGTACT	1 cut(s)	56
SchI	GAGTC	2 cut(s)	1225, 1390
ScrFI	CCNGG	1 cut(s)	945
SduI	GDGCHC	5 cut(s)	382, 604, 986, 1065, 1399
SfaNI	GCATC	2 cut(s)	292, 585
Sfr274I	CTCGAG	1 cut(s)	1448
SinI	GGWCC	1 cut(s)	684
SlaI	CTCGAG	1 cut(s)	1448
SmlI	CTYRAG	7 cut(s)	137, 182, 221, 865, 1064, 1295, 1448
SmoI	CTYRAG	7 cut(s)	137, 182, 221, 865, 1064, 1295, 1448
Sse9I	AATT	6 cut(s)	328, 708, 758, 772, 800, 1415
SseBI	AGGCCT	1 cut(s)	554
SsiI	CCGC	6 cut(s)	43, 96, 145, 323, 598, 1078
SspMI	CTAG	1 cut(s)	1046
SstI	GAGCTC	1 cut(s)	1065
StuI	AGGCCT	1 cut(s)	554
StyD4I	CCNGG	1 cut(s)	943
TaaI	ACNGT	4 cut(s)	15, 265, 392, 398
TaiI	ACGT	2 cut(s)	692, 841
TaqI	TCGA	6 cut(s)	47, 115, 667, 776, 1257, 1449
TasI	AATT	6 cut(s)	328, 708, 758, 772, 800, 1415
TatI	WGTACW	1 cut(s)	54
TauI	GCSGC	2 cut(s)	99, 147
TfiI	GAWTC	6 cut(s)	350, 572, 913, 1300, 1319, 1343
Tru1I	TTAA	3 cut(s)	453, 464, 615
Tru9I	TTAA	3 cut(s)	453, 464, 615
TscAI	CASTG	4 cut(s)	274, 682, 986, 1183
TseFI	GTSAC	1 cut(s)	34
TseI	GCWGC	5 cut(s)	7, 121, 320, 1364, 1367
Tsp45I	GTSAC	1 cut(s)	34
TspDTI	ATGAA	7 cut(s)	144, 269, 325, 458, 563, 570, 668
TspGWI	ACGGA	1 cut(s)	1303
TspRI	CASTG	4 cut(s)	274, 682, 986, 1183
Van91I	CCANNNNNTGG	1 cut(s)	681
VpaK11BI	GGWCC	1 cut(s)	684
XapI	RAATTY	1 cut(s)	772
XceI	RCATGY	1 cut(s)	730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	371
XhoI	CTCGAG	1 cut(s)	1448
XmnI	GAANNNNTTC	2 cut(s)	959, 1290
XspI	CTAG	1 cut(s)	1046
ZrmI	AGTACT	1 cut(s)	56
Zsp2I	ATGCAT	1 cut(s)	285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.