Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0013258

Physical Location & Seq

Genomic Coordinates Reverse (-)

31625748 .. 31627960

Gene Structure 2213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G013540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGCGATGATGCAGCAGTTTGGGCGCACAAAGAGCGTGACGAAGCGTTCGTCGAAATACGTGGAGGAAGCTCTCTACGTCTGGCTCTTCAAAGACGGCGGCTCCGAGTTAAGCGTTTGTCAGAAGCTCAATGAATTCATCAAGAGCCGCAAGCGAGTCTTCAAATGGGAGGTCGGCGACACTCTCAAGAAGCTTCGCCAACGCAAGCTCTACTACCCTGCTCTTAAGCTCTCTGAAACTATGGCTAAAAGGGGAATGAACAAGACCGTTAGTGATCAGGCTATACATCTCGATCTTGTTGCTAAAGCTCGAGGAATTCCTGCTGCGGAAGATTATTTCAAGAATCTTCCTGAATCGTCCAAAAATCATCTCAGTTACGGGGCCCTGCTCAACTGTTACTGTAAGGAATTGATGACTGAAGAGGCTGAAGCTCTACTGGAGAAGATGAAGGAACTTAACCTTCCTTTGACTTCTATGCCTTATAACAGCCTTATGACGCTTTACTCAAAGACTGGGAAGCCAGAAAAGATCCCAGCCATTATACAAGAAATGAAGGGTTGCAGTGTCATGCTCGATTCATATTCTTACAATGTCTGGATGCGGTCGCTAGCTGCTGTCGATGATATTTCTGGGGTGGAAAGGGTTATTGATGAGATGAAGAGGGATGGACGAGTTGCCAGCGATTGGACAACGTATAGCAACTTAGCTTCCATCTATGTTGATGCTGGCATGCCTGAGAAGGCAGAAAATGCACTTAGTGAATTGGAGAAAAAGAATTCCCACCGAGATCTTTCAGCTTTCCAATTCCTTATTACATTGTATGGTCGAACTGGGAACCTGCTTGAAGTACATAGGGTATGGCGTTCCTTGAGGCTTGCTTTCCCTAAAACTGCAAACATAAGTTATCTGAATATGATCCAGGTGTTGGTTAACTTGAGAGATCTACCAGGTGCAGAGAAATGTTTCAGGGAATGGGAATCTCGGTGTTCAACCTATGATATTCGGGTAGCAAATGTTCTGATTGGAGCTTATGCTAAGGAGGGTATGCTAGAGAAGGCTAAGGAGCTCAAGGAACAGGCTCGTAGGAGAGGAGCCAAGCCTAATGCAAAAACCTGGGAGATCTTTGTGGACTATTATTTAAAGAATGCAGAATATGACTTGGCAGTTGAGTCTGTTGCCAATGCAATATCGATTGGTAAAGGGGATGGTCGGAAGTGGATACCATCACATGAGACCATCAAAACCTTGATGGAGCACTTTGAACAAACTAAGGATGTTGAAGGTGCAGAAGGTTTTCTGGAGATTTTGAAGAAGGCTATGGAGTCCTTAGGGGCTGAGGTGTTCGAATCATTAATTAGAACTTATGCCGCTGCTGGAAAGACGACCCAGCCATGCGTCATCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

468

Amino Acids

53.25

Weight (kDa)

8.84

Isoelectric Point (pI)

31.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	125 - 153	3.1e-06	PPR repeat
PPR_2	PF13041	161 - 204	1.5e-06	PPR repeat family
PPR_2	PF13041	336 - 377	4.6e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60770
fragaria_vesca	FvH4_4g12450
malus_domestica	MD13G1097100.v1.1 MD16G1098000.v1.1
prunus_persica	Prupe.1G248500_v2.0.a1
pyrus_communis	pycom13g08480 pycom16g08350
rosa_chinensis	RchiOBHm_Chr4g0410731
rosa_laevigata	RLG00000008406
rosa_multiflora	Rmu_sc0001967.1_g000008 Rmu_ssc0000072.1_g000002
rosa_roxburghii	Rroxscaffold_5G00355480
rosa_rugosa	Rorug04G0111500
rosa_samantha	Rh4AG162600 Rh4BG161400 Rh4CG175500 Rh4DG158200
rosa_wichuraiana	Rw4G013540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	483
Acc36I	ACCTGC	1 cut(s)	846
AccB7I	CCANNNNNTGG	2 cut(s)	684, 925
AciI	CCGC	5 cut(s)	99, 148, 326, 601, 1368
AclWI	GGATC	2 cut(s)	523, 910
AcsI	RAATTY	3 cut(s)	134, 315, 775
AcuI	CTGAAG	2 cut(s)	438, 447
AdeI	CACNNNGTG	1 cut(s)	758
AfaI	GTAC	1 cut(s)	849
AfiI	CCNNNNNNNGG	2 cut(s)	684, 925
AflII	CTTAAG	1 cut(s)	224
AgsI	TTSAA	8 cut(s)	91, 163, 340, 845, 990, 1262, 1280, 1309
AjnI	CCWGG	3 cut(s)	918, 946, 1112
Alw21I	GWGCWC	2 cut(s)	1068, 1257
Alw26I	GTCTC	1 cut(s)	1226
AlwI	GGATC	2 cut(s)	523, 910
Ama87I	CYCGRG	1 cut(s)	309
AoxI	GGCC	1 cut(s)	381
ApaI	GGGCCC	1 cut(s)	385
ApeKI	GCWGC	4 cut(s)	13, 323, 611, 1370
ApoI	RAATTY	3 cut(s)	134, 315, 775
ArsI	GACNNNNNNTTYG	6 cut(s)	31, 35, 63, 67, 156, 188
AseI	ATTAAT	1 cut(s)	1352
Asp700I	GAANNNNTTC	2 cut(s)	962, 1293
AspLEI	GCGC	1 cut(s)	27
AspS9I	GGNCC	2 cut(s)	381, 382
AsuII	TTCGAA	1 cut(s)	1344
AsuNHI	GCTAGC	1 cut(s)	607
AvaI	CYCGRG	1 cut(s)	309
AxyI	CCTNAGG	1 cut(s)	1327
BaeGI	GKGCMC	1 cut(s)	385
BanII	GRGCYC	2 cut(s)	385, 1068
BbsI	GAAGAC	1 cut(s)	151
Bbv12I	GWGCWC	2 cut(s)	1068, 1257
BbvCI	CCTCAGC	1 cut(s)	1335
BbvI	GCAGC	4 cut(s)	25, 310, 598, 1357
BccI	CCATC	6 cut(s)	659, 719, 1199, 1231, 1243, 1244
BceAI	ACGGC	1 cut(s)	112
BcgI	CGANNNNNNTGC	2 cut(s)	281, 315
BciT130I	CCWGG	3 cut(s)	920, 948, 1114
BciVI	GTATCC	1 cut(s)	1212
BclI	TGATCA	1 cut(s)	274
BcoDI	GTCTC	1 cut(s)	1226
BfaI	CTAG	2 cut(s)	608, 1049
BfrI	CTTAAG	1 cut(s)	224
BfuAI	ACCTGC	1 cut(s)	846
BfuI	GTATCC	1 cut(s)	1212
BglII	AGATCT	3 cut(s)	787, 940, 1119
BisI	GCNGC	7 cut(s)	14, 100, 148, 324, 612, 1368, 1371
BlsI	GCNGC	7 cut(s)	15, 101, 149, 325, 613, 1369, 1372
Bme1390I	CCNGG	3 cut(s)	920, 948, 1114
BmeT110I	CYCGRG	1 cut(s)	309
BmgT120I	GGNCC	2 cut(s)	381, 382
BmiI	GGNNCC	5 cut(s)	103, 382, 383, 836, 1093
BmrFI	CCNGG	3 cut(s)	920, 948, 1114
BmrI	ACTGGG	2 cut(s)	522, 840
BmsI	GCATC	2 cut(s)	588, 712
BmtI	GCTAGC	1 cut(s)	611
BmuI	ACTGGG	2 cut(s)	522, 840
BpiI	GAAGAC	1 cut(s)	151
BpmI	CTGGAG	2 cut(s)	458, 1319
Bpu10I	CCTNAGC	3 cut(s)	1035, 1059, 1335
Bpu14I	TTCGAA	1 cut(s)	1344
BpuEI	CTTGAG	4 cut(s)	170, 889, 955, 1052
Bsa29I	ATCGAT	2 cut(s)	1190, 1401
BsaAI	YACGTR	1 cut(s)	61
BsaI	GGTCTC	1 cut(s)	1226
BsaJI	CCNNGG	1 cut(s)	1113
BsaXI	ACNNNNNCTCC	2 cut(s)	86, 116
Bsc4I	CCNNNNNNNGG	2 cut(s)	684, 925
Bse1I	ACTGG	3 cut(s)	441, 517, 835
Bse21I	CCTNAGG	1 cut(s)	1327
BseBI	CCWGG	3 cut(s)	920, 948, 1114
BseCI	ATCGAT	2 cut(s)	1190, 1401
BseDI	CCNNGG	1 cut(s)	1113
BseGI	GGATG	4 cut(s)	603, 670, 1210, 1279
BseLI	CCNNNNNNNGG	2 cut(s)	684, 925
BseMII	CTCAG	3 cut(s)	385, 726, 1326
BseNI	ACTGG	3 cut(s)	441, 517, 835
BseRI	GAGGAG	1 cut(s)	1104
BseSI	GKGCMC	1 cut(s)	385
BseXI	GCAGC	4 cut(s)	25, 310, 598, 1357
BseYI	CCCAGC	2 cut(s)	532, 1386
BsgI	GTGCAG	2 cut(s)	972, 1305
Bsh1285I	CGRYCG	1 cut(s)	605
BshFI	GGCC	1 cut(s)	383
BshVI	ATCGAT	2 cut(s)	1190, 1401
BsiEI	CGRYCG	1 cut(s)	605
BsiHKAI	GWGCWC	2 cut(s)	1068, 1257
BsiHKCI	CYCGRG	1 cut(s)	309
BslI	CCNNNNNNNGG	2 cut(s)	684, 925
BsmAI	GTCTC	1 cut(s)	1226
BsmI	GAATGC	1 cut(s)	1150
BsnI	GGCC	1 cut(s)	383
Bso31I	GGTCTC	1 cut(s)	1226
BsoBI	CYCGRG	1 cut(s)	309
Bsp119I	TTCGAA	1 cut(s)	1344
Bsp120I	GGGCCC	1 cut(s)	381
Bsp1286I	GDGCHC	3 cut(s)	385, 1068, 1257
Bsp143I	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
BspACI	CCGC	5 cut(s)	99, 148, 326, 601, 1368
BspANI	GGCC	1 cut(s)	383
BspCNI	CTCAG	3 cut(s)	384, 727, 1327
BspDI	ATCGAT	2 cut(s)	1190, 1401
BspLI	GGNNCC	5 cut(s)	103, 382, 383, 836, 1093
BspMI	ACCTGC	1 cut(s)	846
BspOI	GCTAGC	1 cut(s)	611
BspPI	GGATC	2 cut(s)	523, 910
BspQI	GCTCTTC	1 cut(s)	92
BspT104I	TTCGAA	1 cut(s)	1344
BspTI	CTTAAG	1 cut(s)	224
BspTNI	GGTCTC	1 cut(s)	1226
BsrI	ACTGG	3 cut(s)	441, 517, 835
BssECI	CCNNGG	1 cut(s)	1113
BssMI	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
Bst2UI	CCWGG	3 cut(s)	920, 948, 1114
Bst4CI	ACNGT	3 cut(s)	268, 395, 401
Bst6I	CTCTTC	3 cut(s)	92, 414, 653
BstAFI	CTTAAG	1 cut(s)	224
BstAPI	GCANNNNNTGC	1 cut(s)	749
BstBAI	YACGTR	1 cut(s)	61
BstBI	TTCGAA	1 cut(s)	1344
BstC8I	GCNNGC	7 cut(s)	152, 206, 609, 679, 727, 731, 876
BstDEI	CTNAG	9 cut(s)	371, 703, 735, 755, 1035, 1059, 1269, 1327, 1335
BstF5I	GGATG	4 cut(s)	603, 670, 1210, 1279
BstHHI	GCGC	1 cut(s)	27
BstKTI	GATC	7 cut(s)	277, 295, 531, 790, 918, 943, 1122
BstMAI	GTCTC	1 cut(s)	1226
BstMBI	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
BstMCI	CGRYCG	1 cut(s)	605
BstMWI	GCNNNNNNNGC	3 cut(s)	22, 33, 749
BstNI	CCWGG	3 cut(s)	920, 948, 1114
BstNSI	RCATGY	1 cut(s)	733
BstSCI	CCNGG	3 cut(s)	918, 946, 1112
BstSLI	GKGCMC	1 cut(s)	385
BstV1I	GCAGC	4 cut(s)	25, 310, 598, 1357
BstV2I	GAAGAC	1 cut(s)	151
BstX2I	RGATCY	4 cut(s)	528, 787, 940, 1119
BstYI	RGATCY	4 cut(s)	528, 787, 940, 1119
Bsu15I	ATCGAT	2 cut(s)	1190, 1401
Bsu36I	CCTNAGG	1 cut(s)	1327
BsuI	GTATCC	1 cut(s)	1212
BsuRI	GGCC	1 cut(s)	383
BsuTUI	ATCGAT	2 cut(s)	1190, 1401
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	4 cut(s)	603, 670, 1210, 1279
BtsI	GCAGTG	1 cut(s)	568
BtsIMutI	CAGTG	1 cut(s)	568
BveI	ACCTGC	1 cut(s)	846
Cac8I	GCNNGC	7 cut(s)	152, 206, 609, 679, 727, 731, 876
CfoI	GCGC	1 cut(s)	27
Cfr13I	GGNCC	2 cut(s)	381, 382
ClaI	ATCGAT	2 cut(s)	1190, 1401
CseI	GACGC	2 cut(s)	505, 1384
CsiI	ACCWGGT	1 cut(s)	946
Csp6I	GTAC	1 cut(s)	848
CviAII	CATG	4 cut(s)	568, 730, 1229, 1392
CviQI	GTAC	1 cut(s)	848
DdeI	CTNAG	9 cut(s)	371, 703, 735, 755, 1035, 1059, 1269, 1327, 1335
DpnI	GATC	7 cut(s)	276, 294, 530, 789, 917, 942, 1121
DpnII	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
DraI	TTTAAA	1 cut(s)	1140
DraIII	CACNNNGTG	1 cut(s)	758
Eam1104I	CTCTTC	3 cut(s)	92, 414, 653
EarI	CTCTTC	3 cut(s)	92, 414, 653
Ecl136II	GAGCTC	1 cut(s)	1066
Eco24I	GRGCYC	2 cut(s)	385, 1068
Eco31I	GGTCTC	1 cut(s)	1226
Eco53kI	GAGCTC	1 cut(s)	1066
Eco57I	CTGAAG	2 cut(s)	438, 447
Eco81I	CCTNAGG	1 cut(s)	1327
Eco88I	CYCGRG	1 cut(s)	309
EcoICRI	GAGCTC	1 cut(s)	1066
EcoO109I	RGGNCCY	2 cut(s)	381, 382
EcoRI	GAATTC	3 cut(s)	134, 315, 775
EcoRII	CCWGG	3 cut(s)	918, 946, 1112
EcoT38I	GRGCYC	2 cut(s)	385, 1068
FaeI	CATG	4 cut(s)	571, 733, 1232, 1395
FalI	AAGNNNNNCTT	2 cut(s)	143, 175
FatI	CATG	4 cut(s)	567, 729, 1228, 1391
FbaI	TGATCA	1 cut(s)	274
Fnu4HI	GCNGC	7 cut(s)	14, 100, 148, 324, 612, 1368, 1371
FokI	GGATG	4 cut(s)	610, 677, 1217, 1286
FriOI	GRGCYC	2 cut(s)	385, 1068
Fsp4HI	GCNGC	7 cut(s)	14, 100, 148, 324, 612, 1368, 1371
FspBI	CTAG	2 cut(s)	608, 1049
GlaI	GCGC	1 cut(s)	26
GluI	GCNGC	7 cut(s)	14, 100, 148, 324, 612, 1368, 1371
GsaI	CCCAGC	2 cut(s)	536, 1390
GsuI	CTGGAG	2 cut(s)	458, 1319
HaeIII	GGCC	1 cut(s)	383
HgaI	GACGC	2 cut(s)	505, 1384
HhaI	GCGC	1 cut(s)	27
Hin1II	CATG	4 cut(s)	571, 733, 1232, 1395
Hin6I	GCGC	1 cut(s)	25
HinP1I	GCGC	1 cut(s)	25
HincII	GTYRAC	1 cut(s)	931
HindII	GTYRAC	1 cut(s)	931
HindIII	AAGCTT	1 cut(s)	191
HinfI	GANTC	8 cut(s)	156, 343, 353, 575, 977, 1169, 1322, 1346
HpaI	GTTAAC	1 cut(s)	931
Hpy166II	GTNNAC	2 cut(s)	931, 1129
Hpy188I	TCNGA	6 cut(s)	106, 123, 235, 909, 1020, 1212
Hpy188III	TCNNGA	7 cut(s)	142, 187, 290, 340, 350, 595, 1298
Hpy8I	GTNNAC	2 cut(s)	931, 1129
Hpy99I	CGWCG	1 cut(s)	55
HpyAV	CCTTC	8 cut(s)	442, 470, 547, 733, 1048, 1274, 1283, 1306
HpyCH4III	ACNGT	3 cut(s)	268, 395, 401
HpyCH4IV	ACGT	3 cut(s)	60, 78, 692
HpyCH4V	TGCA	9 cut(s)	13, 561, 752, 893, 953, 1106, 1148, 1184, 1286
HpyF10VI	GCNNNNNNNGC	3 cut(s)	22, 33, 749
HpyF3I	CTNAG	9 cut(s)	371, 703, 735, 755, 1035, 1059, 1269, 1327, 1335
HpySE526I	ACGT	3 cut(s)	60, 78, 692
Hsp92II	CATG	4 cut(s)	571, 733, 1232, 1395
HspAI	GCGC	1 cut(s)	25
Ksp22I	TGATCA	1 cut(s)	274
KspAI	GTTAAC	1 cut(s)	931
Kzo9I	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
LguI	GCTCTTC	1 cut(s)	92
LmnI	GCTCC	5 cut(s)	107, 1025, 1063, 1091, 1252
Lsp1109I	GCAGC	4 cut(s)	25, 310, 598, 1357
LweI	GCATC	2 cut(s)	588, 712
MabI	ACCWGGT	1 cut(s)	946
MaeI	CTAG	2 cut(s)	608, 1049
MaeII	ACGT	3 cut(s)	60, 78, 692
MaeIII	GTNAC	3 cut(s)	37, 374, 395
MalI	GATC	7 cut(s)	276, 294, 530, 789, 917, 942, 1121
MboI	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
MboII	GAAGA	8 cut(s)	79, 151, 338, 341, 431, 454, 670, 1321
MflI	RGATCY	4 cut(s)	528, 787, 940, 1119
MhlI	GDGCHC	3 cut(s)	385, 1068, 1257
MluCI	AATT	7 cut(s)	134, 315, 407, 761, 775, 803, 1353
MlyI	GAGTC	3 cut(s)	165, 1178, 1331
MmeI	TCCRAC	1 cut(s)	1190
MnlI	CCTC	9 cut(s)	58, 163, 305, 415, 654, 864, 1033, 1082, 1330
MroXI	GAANNNNTTC	2 cut(s)	962, 1293
MseI	TTAA	6 cut(s)	110, 225, 456, 930, 1139, 1352
MspA1I	CMGCKG	1 cut(s)	1370
MspCI	CTTAAG	1 cut(s)	224
MspR9I	CCNGG	3 cut(s)	920, 948, 1114
Mva1269I	GAATGC	1 cut(s)	1150
MvaI	CCWGG	3 cut(s)	920, 948, 1114
MwoI	GCNNNNNNNGC	3 cut(s)	22, 33, 749
NdeII	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
NheI	GCTAGC	1 cut(s)	607
NlaIII	CATG	4 cut(s)	571, 733, 1232, 1395
NlaIV	GGNNCC	5 cut(s)	103, 382, 383, 836, 1093
NmuCI	GTSAC	1 cut(s)	37
NspI	RCATGY	1 cut(s)	733
NspV	TTCGAA	1 cut(s)	1344
PaeI	GCATGC	1 cut(s)	733
PaeR7I	CTCGAG	1 cut(s)	309
PciSI	GCTCTTC	1 cut(s)	92
PcsI	WCGNNNNNNNCGW	2 cut(s)	47, 102
PctI	GAATGC	1 cut(s)	1150
PdmI	GAANNNNTTC	2 cut(s)	962, 1293
PfeI	GAWTC	5 cut(s)	343, 353, 575, 977, 1346
PflMI	CCANNNNNTGG	2 cut(s)	684, 925
PkrI	GCNGC	7 cut(s)	15, 101, 149, 325, 613, 1369, 1372
PleI	GAGTC	3 cut(s)	164, 1177, 1330
PpsI	GAGTC	3 cut(s)	164, 1177, 1330
Ppu21I	YACGTR	1 cut(s)	61
PshBI	ATTAAT	1 cut(s)	1352
PsiI	TTATAA	1 cut(s)	483
Psp124BI	GAGCTC	1 cut(s)	1068
Psp6I	CCWGG	3 cut(s)	918, 946, 1112
PspFI	CCCAGC	2 cut(s)	532, 1386
PspGI	CCWGG	3 cut(s)	918, 946, 1112
PspN4I	GGNNCC	5 cut(s)	103, 382, 383, 836, 1093
PspOMI	GGGCCC	1 cut(s)	381
PspPI	GGNCC	2 cut(s)	381, 382
PspXI	VCTCGAGB	1 cut(s)	309
PsrI	GAACNNNNNNTAC	2 cut(s)	999, 1031
PsuI	RGATCY	4 cut(s)	528, 787, 940, 1119
RsaI	GTAC	1 cut(s)	849
RsaNI	GTAC	1 cut(s)	848
SacI	GAGCTC	1 cut(s)	1068
SapI	GCTCTTC	1 cut(s)	92
SaqAI	TTAA	6 cut(s)	110, 225, 456, 930, 1139, 1352
SatI	GCNGC	7 cut(s)	14, 100, 148, 324, 612, 1368, 1371
Sau3AI	GATC	7 cut(s)	274, 292, 528, 787, 915, 940, 1119
Sau96I	GGNCC	2 cut(s)	381, 382
SchI	GAGTC	3 cut(s)	165, 1178, 1331
ScrFI	CCNGG	3 cut(s)	920, 948, 1114
SduI	GDGCHC	3 cut(s)	385, 1068, 1257
SexAI	ACCWGGT	1 cut(s)	946
SfaNI	GCATC	2 cut(s)	588, 712
Sfr274I	CTCGAG	1 cut(s)	309
SfuI	TTCGAA	1 cut(s)	1344
SlaI	CTCGAG	1 cut(s)	309
SmlI	CTYRAG	6 cut(s)	185, 224, 309, 868, 934, 1067
SmoI	CTYRAG	6 cut(s)	185, 224, 309, 868, 934, 1067
SphI	GCATGC	1 cut(s)	733
Sse9I	AATT	7 cut(s)	134, 315, 407, 761, 775, 803, 1353
SsiI	CCGC	5 cut(s)	99, 148, 326, 601, 1368
SspMI	CTAG	2 cut(s)	608, 1049
SstI	GAGCTC	1 cut(s)	1068
StyD4I	CCNGG	3 cut(s)	918, 946, 1112
TaaI	ACNGT	3 cut(s)	268, 395, 401
TaiI	ACGT	3 cut(s)	63, 81, 695
TaqI	TCGA	9 cut(s)	53, 291, 310, 573, 618, 826, 1190, 1344, 1401
TasI	AATT	7 cut(s)	134, 315, 407, 761, 775, 803, 1353
TatI	WGTACW	1 cut(s)	847
TauI	GCSGC	3 cut(s)	102, 150, 1370
TfiI	GAWTC	5 cut(s)	343, 353, 575, 977, 1346
Tru1I	TTAA	6 cut(s)	110, 225, 456, 930, 1139, 1352
Tru9I	TTAA	6 cut(s)	110, 225, 456, 930, 1139, 1352
TscAI	CASTG	1 cut(s)	568
TseFI	GTSAC	1 cut(s)	37
TseI	GCWGC	4 cut(s)	13, 323, 611, 1370
Tsp45I	GTSAC	1 cut(s)	37
TspDTI	ATGAA	7 cut(s)	127, 147, 272, 461, 566, 567, 671
TspRI	CASTG	1 cut(s)	568
Van91I	CCANNNNNTGG	2 cut(s)	684, 925
Vha464I	CTTAAG	1 cut(s)	224
VspI	ATTAAT	1 cut(s)	1352
XapI	RAATTY	3 cut(s)	134, 315, 775
XceI	RCATGY	1 cut(s)	733
XhoI	CTCGAG	1 cut(s)	309
XmnI	GAANNNNTTC	2 cut(s)	962, 1293
XspI	CTAG	2 cut(s)	608, 1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.