BEST Arabidopsis thaliana protein match is glycosyltransferase family protein 2 (TAIR AT5G60700.1)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12260 |
| fragaria_vesca | FvH4_5g29830 FvH4_5g29830 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910 |
| malus_domestica | MD10G1340300.v1.1 MD13G1224500.v1.1 MD13G1224600.v1.1 |
| prunus_persica | Prupe.1G051200_v2.0.a1 Prupe.1G051200_v2.0.a1 |
| pyrus_communis | pycom13g19820 pycom16g19110 |
| rosa_chinensis | RchiOBHm_Chr1g0336841 RchiOBHm_Chr7g0223431 |
| rosa_laevigata | RLG00000001965 RLG00000029331 RLG00000029333 |
| rosa_multiflora | Rmu_co8498753.1_g000002 Rmu_sc0007408.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00235810 Rroxscaffold_4G00315310 |
| rosa_rugosa | Rorug01G0128200 Rorug07G0216600 Rorug07G0216600 Rorug07G0216600 Rorug07G0216600 |
| rosa_samantha | Rh1AG149000 Rh1BG117100 Rh1CG140300 Rh1DG156300 Rh7AG360300 Rh7BG350400 Rh7CG378900 Rh7DG355800 |
| rosa_wichuraiana | Rw1G012050 Rw1G012060 Rw7G030630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 488 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 427, 955 |
| AccI | GTMKAC | 2 cut(s) | 267, 273 |
| AciI | CCGC | 3 cut(s) | 231, 497, 1702 |
| AclWI | GGATC | 3 cut(s) | 287, 300, 1382 |
| AcsI | RAATTY | 7 cut(s) | 116, 136, 368, 830, 1040, 1484, 1712 |
| AcuI | CTGAAG | 3 cut(s) | 398, 1301, 1668 |
| AfaI | GTAC | 5 cut(s) | 659, 954, 1203, 1267, 1325 |
| AfeI | AGCGCT | 1 cut(s) | 888 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 189, 427, 955, 1135, 1262 |
| AflII | CTTAAG | 1 cut(s) | 1010 |
| AgsI | TTSAA | 4 cut(s) | 187, 303, 1178, 1709 |
| AhlI | ACTAGT | 1 cut(s) | 664 |
| AjnI | CCWGG | 3 cut(s) | 434, 604, 1331 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 146, 178 |
| AluBI | AGCT | 7 cut(s) | 206, 685, 935, 1147, 1295, 1419, 1552 |
| AluI | AGCT | 7 cut(s) | 206, 685, 935, 1147, 1295, 1419, 1552 |
| Alw21I | GWGCWC | 1 cut(s) | 1421 |
| Alw26I | GTCTC | 6 cut(s) | 10, 496, 901, 1586, 1610, 1674 |
| AlwI | GGATC | 3 cut(s) | 287, 300, 1382 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1279 |
| Ama87I | CYCGRG | 2 cut(s) | 287, 1076 |
| Aor51HI | AGCGCT | 1 cut(s) | 888 |
| AoxI | GGCC | 6 cut(s) | 409, 417, 432, 440, 938, 1210 |
| ApeKI | GCWGC | 3 cut(s) | 210, 227, 586 |
| ApoI | RAATTY | 7 cut(s) | 116, 136, 368, 830, 1040, 1484, 1712 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 443, 475, 1214, 1246 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1041 |
| AspLEI | GCGC | 1 cut(s) | 889 |
| AspS9I | GGNCC | 7 cut(s) | 8, 175, 253, 418, 441, 938, 1211 |
| AsuC2I | CCSGG | 1 cut(s) | 905 |
| AsuHPI | GGTGA | 7 cut(s) | 151, 486, 784, 893, 1270, 1478, 1757 |
| AvaI | CYCGRG | 2 cut(s) | 287, 1076 |
| AvaII | GGWCC | 3 cut(s) | 8, 175, 253 |
| BamHI | GGATCC | 1 cut(s) | 292 |
| BanII | GRGCYC | 1 cut(s) | 1421 |
| BauI | CACGAG | 2 cut(s) | 878, 1671 |
| Bbv12I | GWGCWC | 1 cut(s) | 1421 |
| BbvI | GCAGC | 3 cut(s) | 197, 214, 598 |
| BccI | CCATC | 7 cut(s) | 264, 347, 758, 790, 1337, 1640, 1651 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1489, 1523 |
| BciT130I | CCWGG | 3 cut(s) | 436, 606, 1333 |
| BclI | TGATCA | 1 cut(s) | 310 |
| BcnI | CCSGG | 1 cut(s) | 905 |
| BcoDI | GTCTC | 6 cut(s) | 10, 496, 901, 1586, 1610, 1674 |
| BcuI | ACTAGT | 1 cut(s) | 664 |
| BfaI | CTAG | 2 cut(s) | 665, 1511 |
| BfmI | CTRYAG | 2 cut(s) | 584, 1728 |
| BfoI | RGCGCY | 1 cut(s) | 890 |
| BfrI | CTTAAG | 1 cut(s) | 1010 |
| BglII | AGATCT | 1 cut(s) | 1442 |
| BisI | GCNGC | 5 cut(s) | 211, 228, 231, 587, 1703 |
| BlsI | GCNGC | 5 cut(s) | 212, 229, 232, 588, 1704 |
| Bme1390I | CCNGG | 4 cut(s) | 436, 606, 905, 1333 |
| Bme18I | GGWCC | 3 cut(s) | 8, 175, 253 |
| BmeT110I | CYCGRG | 2 cut(s) | 287, 1076 |
| BmgT120I | GGNCC | 7 cut(s) | 8, 175, 253, 418, 441, 938, 1211 |
| BmiI | GGNNCC | 3 cut(s) | 9, 294, 1064 |
| BmrFI | CCNGG | 4 cut(s) | 436, 606, 905, 1333 |
| BmrI | ACTGGG | 1 cut(s) | 438 |
| BmsI | GCATC | 3 cut(s) | 340, 587, 898 |
| BmuI | ACTGGG | 1 cut(s) | 438 |
| BpuMI | CCSGG | 1 cut(s) | 905 |
| BsaAI | YACGTR | 2 cut(s) | 271, 1408 |
| BsaI | GGTCTC | 3 cut(s) | 496, 1610, 1674 |
| BsaJI | CCNNGG | 9 cut(s) | 11, 286, 593, 604, 701, 818, 844, 1332, 1600 |
| BsaWI | WCCGGW | 2 cut(s) | 393, 1255 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 9, 39, 62, 92, 422, 452 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 189, 427, 955, 1135, 1262 |
| Bse1I | ACTGG | 4 cut(s) | 444, 960, 1273, 1768 |
| BseBI | CCWGG | 3 cut(s) | 436, 606, 1333 |
| BseDI | CCNNGG | 9 cut(s) | 11, 286, 593, 604, 701, 818, 844, 1332, 1600 |
| BseGI | GGATG | 7 cut(s) | 384, 640, 723, 913, 1252, 1348, 1651 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 189, 427, 955, 1135, 1262 |
| BseMII | CTCAG | 5 cut(s) | 506, 904, 1375, 1434, 1466 |
| BseNI | ACTGG | 4 cut(s) | 444, 960, 1273, 1768 |
| BseRI | GAGGAG | 3 cut(s) | 23, 26, 70 |
| BseXI | GCAGC | 3 cut(s) | 197, 214, 598 |
| BseYI | CCCAGC | 1 cut(s) | 935 |
| BsgI | GTGCAG | 1 cut(s) | 1118 |
| BshFI | GGCC | 6 cut(s) | 411, 419, 434, 442, 940, 1212 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1421 |
| BsiHKCI | CYCGRG | 2 cut(s) | 287, 1076 |
| BsiSI | CCGG | 3 cut(s) | 394, 904, 1256 |
| BslFI | GGGAC | 3 cut(s) | 21, 546, 587 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 189, 427, 955, 1135, 1262 |
| BsmAI | GTCTC | 6 cut(s) | 10, 496, 901, 1586, 1610, 1674 |
| BsmFI | GGGAC | 3 cut(s) | 21, 546, 587 |
| BsnI | GGCC | 6 cut(s) | 411, 419, 434, 442, 940, 1212 |
| Bso31I | GGTCTC | 3 cut(s) | 496, 1610, 1674 |
| BsoBI | CYCGRG | 2 cut(s) | 287, 1076 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1421 |
| Bsp143I | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| BspACI | CCGC | 3 cut(s) | 231, 497, 1702 |
| BspANI | GGCC | 6 cut(s) | 411, 419, 434, 442, 940, 1212 |
| BspCNI | CTCAG | 5 cut(s) | 507, 903, 1374, 1433, 1465 |
| BspHI | TCATGA | 1 cut(s) | 1608 |
| BspLI | GGNNCC | 3 cut(s) | 9, 294, 1064 |
| BspMAI | CTGCAG | 1 cut(s) | 588 |
| BspPI | GGATC | 3 cut(s) | 287, 300, 1382 |
| BspQI | GCTCTTC | 1 cut(s) | 1409 |
| BspTI | CTTAAG | 1 cut(s) | 1010 |
| BspTNI | GGTCTC | 3 cut(s) | 496, 1610, 1674 |
| BsrI | ACTGG | 4 cut(s) | 444, 960, 1273, 1768 |
| BssECI | CCNNGG | 9 cut(s) | 11, 286, 593, 604, 701, 818, 844, 1332, 1600 |
| BssMI | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| BssSI | CACGAG | 2 cut(s) | 878, 1671 |
| BssT1I | CCWWGG | 5 cut(s) | 11, 593, 701, 818, 1600 |
| Bst2BI | CACGAG | 2 cut(s) | 878, 1671 |
| Bst2UI | CCWGG | 3 cut(s) | 436, 606, 1333 |
| Bst4CI | ACNGT | 2 cut(s) | 1622, 1729 |
| Bst6I | CTCTTC | 7 cut(s) | 62, 90, 656, 1240, 1277, 1409, 1554 |
| BstAFI | CTTAAG | 1 cut(s) | 1010 |
| BstBAI | YACGTR | 2 cut(s) | 271, 1408 |
| BstC8I | GCNNGC | 2 cut(s) | 208, 1149 |
| BstDEI | CTNAG | 5 cut(s) | 515, 890, 1361, 1420, 1452 |
| BstDSI | CCRYGG | 1 cut(s) | 844 |
| BstF5I | GGATG | 7 cut(s) | 384, 640, 723, 913, 1252, 1348, 1651 |
| BstH2I | RGCGCY | 1 cut(s) | 890 |
| BstHHI | GCGC | 1 cut(s) | 889 |
| BstKTI | GATC | 8 cut(s) | 295, 313, 733, 1009, 1237, 1390, 1445, 1614 |
| BstMAI | GTCTC | 6 cut(s) | 10, 496, 901, 1586, 1610, 1674 |
| BstMBI | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 328, 1496 |
| BstNI | CCWGG | 3 cut(s) | 436, 606, 1333 |
| BstNSI | RCATGY | 1 cut(s) | 1354 |
| BstSCI | CCNGG | 4 cut(s) | 434, 604, 903, 1331 |
| BstSFI | CTRYAG | 2 cut(s) | 584, 1728 |
| BstSNI | TACGTA | 2 cut(s) | 271, 1408 |
| BstV1I | GCAGC | 3 cut(s) | 197, 214, 598 |
| BstX2I | RGATCY | 2 cut(s) | 292, 1442 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 668 |
| BstYI | RGATCY | 2 cut(s) | 292, 1442 |
| BsuRI | GGCC | 6 cut(s) | 411, 419, 434, 442, 940, 1212 |
| BtgI | CCRYGG | 1 cut(s) | 844 |
| BtsCI | GGATG | 7 cut(s) | 384, 640, 723, 913, 1252, 1348, 1651 |
| BtsI | GCAGTG | 2 cut(s) | 581, 1372 |
| BtsIMutI | CAGTG | 4 cut(s) | 243, 581, 898, 1372 |
| Cac8I | GCNNGC | 2 cut(s) | 208, 1149 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1279 |
| CciI | TCATGA | 1 cut(s) | 1608 |
| CfoI | GCGC | 1 cut(s) | 889 |
| Cfr13I | GGNCC | 7 cut(s) | 8, 175, 253, 418, 441, 938, 1211 |
| Csp6I | GTAC | 5 cut(s) | 658, 953, 1202, 1266, 1324 |
| CviAII | CATG | 6 cut(s) | 263, 769, 950, 1106, 1351, 1609 |
| CviQI | GTAC | 5 cut(s) | 658, 953, 1202, 1266, 1324 |
| DdeI | CTNAG | 5 cut(s) | 515, 890, 1361, 1420, 1452 |
| DpnI | GATC | 8 cut(s) | 294, 312, 732, 1008, 1236, 1389, 1444, 1613 |
| DpnII | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 488 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 488 |
| Eam1104I | CTCTTC | 7 cut(s) | 62, 90, 656, 1240, 1277, 1409, 1554 |
| EarI | CTCTTC | 7 cut(s) | 62, 90, 656, 1240, 1277, 1409, 1554 |
| Ecl136II | GAGCTC | 1 cut(s) | 1419 |
| Eco105I | TACGTA | 2 cut(s) | 271, 1408 |
| Eco130I | CCWWGG | 5 cut(s) | 11, 593, 701, 818, 1600 |
| Eco147I | AGGCCT | 1 cut(s) | 434 |
| Eco24I | GRGCYC | 1 cut(s) | 1421 |
| Eco31I | GGTCTC | 3 cut(s) | 496, 1610, 1674 |
| Eco47I | GGWCC | 3 cut(s) | 8, 175, 253 |
| Eco47III | AGCGCT | 1 cut(s) | 888 |
| Eco53kI | GAGCTC | 1 cut(s) | 1419 |
| Eco57I | CTGAAG | 3 cut(s) | 398, 1301, 1668 |
| Eco88I | CYCGRG | 2 cut(s) | 287, 1076 |
| EcoICRI | GAGCTC | 1 cut(s) | 1419 |
| EcoO109I | RGGNCCY | 1 cut(s) | 175 |
| EcoRI | GAATTC | 1 cut(s) | 1712 |
| EcoRII | CCWGG | 3 cut(s) | 434, 604, 1331 |
| EcoT14I | CCWWGG | 5 cut(s) | 11, 593, 701, 818, 1600 |
| EcoT38I | GRGCYC | 1 cut(s) | 1421 |
| ErhI | CCWWGG | 5 cut(s) | 11, 593, 701, 818, 1600 |
| FaeI | CATG | 6 cut(s) | 266, 772, 953, 1109, 1354, 1612 |
| FaqI | GGGAC | 3 cut(s) | 21, 546, 587 |
| FatI | CATG | 6 cut(s) | 262, 768, 949, 1105, 1350, 1608 |
| FbaI | TGATCA | 1 cut(s) | 310 |
| FblI | GTMKAC | 2 cut(s) | 267, 273 |
| Fnu4HI | GCNGC | 5 cut(s) | 211, 228, 231, 587, 1703 |
| FokI | GGATG | 7 cut(s) | 371, 647, 730, 920, 1239, 1355, 1658 |
| FriOI | GRGCYC | 1 cut(s) | 1421 |
| Fsp4HI | GCNGC | 5 cut(s) | 211, 228, 231, 587, 1703 |
| FspBI | CTAG | 2 cut(s) | 665, 1511 |
| GlaI | GCGC | 1 cut(s) | 888 |
| GluI | GCNGC | 5 cut(s) | 211, 228, 231, 587, 1703 |
| GsaI | CCCAGC | 1 cut(s) | 939 |
| HaeII | RGCGCY | 1 cut(s) | 890 |
| HaeIII | GGCC | 6 cut(s) | 411, 419, 434, 442, 940, 1212 |
| HapII | CCGG | 3 cut(s) | 394, 904, 1256 |
| HhaI | GCGC | 1 cut(s) | 889 |
| Hin1II | CATG | 6 cut(s) | 266, 772, 953, 1109, 1354, 1612 |
| Hin6I | GCGC | 1 cut(s) | 887 |
| HinP1I | GCGC | 1 cut(s) | 887 |
| HincII | GTYRAC | 1 cut(s) | 1618 |
| HindII | GTYRAC | 1 cut(s) | 1618 |
| HindIII | AAGCTT | 1 cut(s) | 1550 |
| HpaI | GTTAAC | 1 cut(s) | 1618 |
| HpaII | CCGG | 3 cut(s) | 394, 904, 1256 |
| HphI | GGTGA | 7 cut(s) | 151, 486, 784, 893, 1270, 1478, 1757 |
| Hpy166II | GTNNAC | 4 cut(s) | 268, 274, 611, 1618 |
| Hpy8I | GTNNAC | 4 cut(s) | 268, 274, 611, 1618 |
| HpyAV | CCTTC | 8 cut(s) | 137, 172, 193, 309, 422, 700, 1558, 1567 |
| HpyCH4III | ACNGT | 2 cut(s) | 1622, 1729 |
| HpyCH4IV | ACGT | 3 cut(s) | 217, 270, 1407 |
| HpyCH4V | TGCA | 8 cut(s) | 322, 401, 586, 877, 994, 1099, 1490, 1749 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 328, 1496 |
| HpyF3I | CTNAG | 5 cut(s) | 515, 890, 1361, 1420, 1452 |
| HpySE526I | ACGT | 3 cut(s) | 217, 270, 1407 |
| Hsp92II | CATG | 6 cut(s) | 266, 772, 953, 1109, 1354, 1612 |
| HspAI | GCGC | 1 cut(s) | 887 |
| Ksp22I | TGATCA | 1 cut(s) | 310 |
| KspAI | GTTAAC | 1 cut(s) | 1618 |
| Kzo9I | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| LguI | GCTCTTC | 1 cut(s) | 1409 |
| LmnI | GCTCC | 2 cut(s) | 1062, 1292 |
| Lsp1109I | GCAGC | 3 cut(s) | 197, 214, 598 |
| LweI | GCATC | 3 cut(s) | 340, 587, 898 |
| MaeI | CTAG | 2 cut(s) | 665, 1511 |
| MaeII | ACGT | 3 cut(s) | 217, 270, 1407 |
| MaeIII | GTNAC | 3 cut(s) | 772, 1367, 1763 |
| MalI | GATC | 8 cut(s) | 294, 312, 732, 1008, 1236, 1389, 1444, 1613 |
| MboI | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| MflI | RGATCY | 2 cut(s) | 292, 1442 |
| MhlI | GDGCHC | 1 cut(s) | 1421 |
| MlyI | GAGTC | 5 cut(s) | 191, 335, 642, 1391, 1591 |
| MmeI | TCCRAC | 2 cut(s) | 408, 1270 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1041 |
| MseI | TTAA | 8 cut(s) | 750, 828, 855, 918, 1011, 1089, 1617, 1629 |
| MslI | CAYNNNNRTG | 3 cut(s) | 261, 843, 906 |
| MspA1I | CMGCKG | 2 cut(s) | 499, 935 |
| MspCI | CTTAAG | 1 cut(s) | 1010 |
| MspI | CCGG | 3 cut(s) | 394, 904, 1256 |
| MspR9I | CCNGG | 4 cut(s) | 436, 606, 905, 1333 |
| MvaI | CCWGG | 3 cut(s) | 436, 606, 1333 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 328, 1496 |
| NciI | CCSGG | 1 cut(s) | 905 |
| NdeII | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| NlaIII | CATG | 6 cut(s) | 266, 772, 953, 1109, 1354, 1612 |
| NlaIV | GGNNCC | 3 cut(s) | 9, 294, 1064 |
| NmuCI | GTSAC | 3 cut(s) | 772, 1367, 1763 |
| NspI | RCATGY | 1 cut(s) | 1354 |
| PagI | TCATGA | 1 cut(s) | 1608 |
| PceI | AGGCCT | 1 cut(s) | 434 |
| PciSI | GCTCTTC | 1 cut(s) | 1409 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 214, 1404 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1041 |
| PfeI | GAWTC | 5 cut(s) | 944, 974, 1217, 1316, 1634 |
| PflFI | GACNNNGTC | 1 cut(s) | 251 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 427, 955 |
| PkrI | GCNGC | 5 cut(s) | 212, 229, 232, 588, 1704 |
| PleI | GAGTC | 5 cut(s) | 191, 334, 642, 1390, 1590 |
| PpsI | GAGTC | 5 cut(s) | 191, 334, 642, 1390, 1590 |
| Ppu21I | YACGTR | 2 cut(s) | 271, 1408 |
| PpuMI | RGGWCCY | 1 cut(s) | 175 |
| Psp124BI | GAGCTC | 1 cut(s) | 1421 |
| Psp5II | RGGWCCY | 1 cut(s) | 175 |
| Psp6I | CCWGG | 3 cut(s) | 434, 604, 1331 |
| PspFI | CCCAGC | 1 cut(s) | 935 |
| PspGI | CCWGG | 3 cut(s) | 434, 604, 1331 |
| PspN4I | GGNNCC | 3 cut(s) | 9, 294, 1064 |
| PspPI | GGNCC | 7 cut(s) | 8, 175, 253, 418, 441, 938, 1211 |
| PspPPI | RGGWCCY | 1 cut(s) | 175 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 494, 526 |
| PstI | CTGCAG | 1 cut(s) | 588 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1279 |
| PsuI | RGATCY | 2 cut(s) | 292, 1442 |
| PsyI | GACNNNGTC | 1 cut(s) | 251 |
| PvuII | CAGCTG | 1 cut(s) | 935 |
| RsaI | GTAC | 5 cut(s) | 659, 954, 1203, 1267, 1325 |
| RsaNI | GTAC | 5 cut(s) | 658, 953, 1202, 1266, 1324 |
| RseI | CAYNNNNRTG | 3 cut(s) | 261, 843, 906 |
| SacI | GAGCTC | 1 cut(s) | 1421 |
| SapI | GCTCTTC | 1 cut(s) | 1409 |
| SaqAI | TTAA | 8 cut(s) | 750, 828, 855, 918, 1011, 1089, 1617, 1629 |
| SatI | GCNGC | 5 cut(s) | 211, 228, 231, 587, 1703 |
| Sau3AI | GATC | 8 cut(s) | 292, 310, 730, 1006, 1234, 1387, 1442, 1611 |
| Sau96I | GGNCC | 7 cut(s) | 8, 175, 253, 418, 441, 938, 1211 |
| SchI | GAGTC | 5 cut(s) | 191, 335, 642, 1391, 1591 |
| ScrFI | CCNGG | 4 cut(s) | 436, 606, 905, 1333 |
| SduI | GDGCHC | 1 cut(s) | 1421 |
| SfaNI | GCATC | 3 cut(s) | 340, 587, 898 |
| SfcI | CTRYAG | 2 cut(s) | 584, 1728 |
| SinI | GGWCC | 3 cut(s) | 8, 175, 253 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 261, 843, 906 |
| SmlI | CTYRAG | 1 cut(s) | 1010 |
| SmoI | CTYRAG | 1 cut(s) | 1010 |
| SnaBI | TACGTA | 2 cut(s) | 271, 1408 |
| SpeI | ACTAGT | 1 cut(s) | 664 |
| SseBI | AGGCCT | 1 cut(s) | 434 |
| SsiI | CCGC | 3 cut(s) | 231, 497, 1702 |
| SspI | AATATT | 1 cut(s) | 1459 |
| SspMI | CTAG | 2 cut(s) | 665, 1511 |
| SstI | GAGCTC | 1 cut(s) | 1421 |
| StuI | AGGCCT | 1 cut(s) | 434 |
| StyD4I | CCNGG | 4 cut(s) | 434, 604, 903, 1331 |
| StyI | CCWWGG | 5 cut(s) | 11, 593, 701, 818, 1600 |
| TaaI | ACNGT | 2 cut(s) | 1622, 1729 |
| TaiI | ACGT | 3 cut(s) | 220, 273, 1410 |
| TatI | WGTACW | 2 cut(s) | 952, 1201 |
| TauI | GCSGC | 2 cut(s) | 233, 1705 |
| TfiI | GAWTC | 5 cut(s) | 944, 974, 1217, 1316, 1634 |
| Tru1I | TTAA | 8 cut(s) | 750, 828, 855, 918, 1011, 1089, 1617, 1629 |
| Tru9I | TTAA | 8 cut(s) | 750, 828, 855, 918, 1011, 1089, 1617, 1629 |
| TscAI | CASTG | 4 cut(s) | 250, 588, 898, 1372 |
| TseFI | GTSAC | 3 cut(s) | 772, 1367, 1763 |
| TseI | GCWGC | 3 cut(s) | 210, 227, 586 |
| Tsp45I | GTSAC | 3 cut(s) | 772, 1367, 1763 |
| TspDTI | ATGAA | 6 cut(s) | 154, 814, 823, 827, 1086, 1647 |
| TspGWI | ACGGA | 1 cut(s) | 40 |
| TspRI | CASTG | 4 cut(s) | 250, 588, 898, 1372 |
| Tth111I | GACNNNGTC | 1 cut(s) | 251 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 427, 955 |
| Vha464I | CTTAAG | 1 cut(s) | 1010 |
| VpaK11BI | GGWCC | 3 cut(s) | 8, 175, 253 |
| XapI | RAATTY | 7 cut(s) | 116, 136, 368, 830, 1040, 1484, 1712 |
| XceI | RCATGY | 1 cut(s) | 1354 |
| XmiI | GTMKAC | 2 cut(s) | 267, 273 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1041 |
| XspI | CTAG | 2 cut(s) | 665, 1511 |