Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002619

Physical Location & Seq

Genomic Coordinates Reverse (-)

39571888 .. 39574648

Gene Structure 2761 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00315310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGTGGGACCCAAAACACAGTTGCTTCCACTCCTGCTCCTCCTCCTCTTCCTCTCCGCCCTCACCTTCTTCTCCTACCACCACTCCTCCCTCCTAATCTCACTTTCAAACCCTAACCCTAACCTTAATCTCACTCTCCACCCCCAAATTCCCAATTTCACCTTCATCATCAAGGTCCTCGCCTACAACCGCCTCGACTCTCTCTCCCGCTGCCTCCGCTCCCTCGCCGCCGCCGACTACCTCTCCGACGATGTCCACCTCCACCTCCACATTGACCATTTCCCCCTCGCCGTCCCCGACGACGCCGATCGCAAGCTGCAGGAGTCGCGTCGCATTCTGGACTTGGTCGATGGATTCGAGTGGAAGTTCGGCGACAAGGTCGTGCATTACCGGACTCAAAACGCGGGCCTCCAGGCCCAGTGGCTCGAGGCCTGGTGGCCCAGCTCCGATCACGAGTTCGCGTTCGTTGTGGAAGATGACTTGGAGGTGTCGCCGCTCTATTACAAGTTTCTCAAGAATCTGATTGTGAATTACTACTACAACGCCTCCAATTCTCGTCCTTACATCTATGGAGCTTCGCTTCAGCGACCAAGGTTTGTTCCAGGTAAACACGGGAACAAACTACAATTGGATGATGGAACACGACTCTTTTTGTACCAACTGGTTGGCACTTGGGGTCAGCTTCTGTTTCCTAAACCTTGGAAAGAGTTCAGGTTGTGGTACGACAAACACAAGGCCAAAGGCATTAAGCCAATCCTCAATGGCATGGTAACAACTGGGTGGTATAAAAAGATGGGAGAGAAGATATGGACACCGTGGTTCATTAAATTCATTCATACTCGTGGCTATTTTAATATCTACACCAACTTTTTACATGAAAGAGCGCTTAGTGCCTCTCACAGAGATGCTGGTGTCAATTATGGGAAGACAGCTGGGCCTGATTCACATATATTGGATGAAAGTTCTCTTGATTTGATGTTTTGGGACATGCAACCGTTGAGTGATCTCAAGTGGTATGATTTTTGTTTCAGAGAAATATTTCCTGAAAGAGTTGTTGTGAGCCTTGATGAACTTGGGTCCACTCTTGATTCTGTGCAGAAACACAACACCGTTATTGTTGTTAGCCTGTTTGGGGCTAAAGAGATGGTAATAAGAAACCTACTCTGCCATTTTGAGACTCTAAATTTGCTGAATTATGTACTTATTGGCCCCGAGTCTGAACTCTTGTTCGATCTGGCAAGAAGAGGACATCCAGTGATCACTACGAACCGCTTTCTGGAGAGTGTAGGAGCGCATAAATTGATTTCCATGAAGCATTCTCATGCGCACATTATCAATGAAATATTAGTCAAGGTCTATGTATTACAGAAGTGTTTACAATCTGGGTACAGTTCCTGGGTGGTGGATGGGAACATGCTTCCAGTCAGCAGTGACGCATTTGTCGAGTCGGATCACTCATATGATTTCTATATAGGTAAAACCTCAGAACTTTTCTTTGCCAGTGGATTATCTTCTACTCGAAAGGTTTGGGATGATGATTTTATATCAAAATTTGCAATGATGGTGAACTCTTTTCTAGTTAAACGACAGAGCATAAGTTTCGGTTATGTAATGGCAGAGATTTTGGAACAGAAAAAAGGTGTGAGGGTGAAGAATCTTGATGAGACAAGCTTTGGTGTTAGGATCGATAACAGTAGGGTCAATCAATCTTTAGGTGATGGAAAGCAGGTGGCTTTCTGGTCACATGATATGGCTTCAGATTTAGTTCAACAACGGCTTCAGGAACTGGGTGTTTGGACTGTGGATGACGACTTTTCTTGTAAGGCTGTTATTTGTCACCAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

615

Amino Acids

70.83

Weight (kDa)

6.68

Isoelectric Point (pI)

35.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002619)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12260
fragaria_vesca	FvH4_5g29830 FvH4_5g29830 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910
malus_domestica	MD10G1340300.v1.1 MD13G1224500.v1.1 MD13G1224600.v1.1
prunus_persica	Prupe.1G051200_v2.0.a1 Prupe.1G051200_v2.0.a1
pyrus_communis	pycom13g19820 pycom16g19110
rosa_chinensis	RchiOBHm_Chr1g0336841 RchiOBHm_Chr7g0223431
rosa_laevigata	RLG00000001965 RLG00000029331 RLG00000029333
rosa_multiflora	Rmu_co8498753.1_g000002 Rmu_sc0007408.1_g000014
rosa_roxburghii	Rroxscaffold_3G00235810 Rroxscaffold_4G00315310
rosa_rugosa	Rorug01G0128200 Rorug07G0216600 Rorug07G0216600 Rorug07G0216600 Rorug07G0216600
rosa_samantha	Rh1AG149000 Rh1BG117100 Rh1CG140300 Rh1DG156300 Rh7AG360300 Rh7BG350400 Rh7CG378900 Rh7DG355800
rosa_wichuraiana	Rw1G012050 Rw1G012060 Rw7G030630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1717
AasI	GACNNNNNNGTC	1 cut(s)	1439
Acc16I	TGCGCA	1 cut(s)	1326
Acc36I	ACCTGC	1 cut(s)	1717
AccBSI	CCGCTC	2 cut(s)	219, 496
AccII	CGCG	3 cut(s)	328, 404, 461
AciI	CCGC	9 cut(s)	57, 190, 208, 217, 228, 231, 404, 494, 1270
AclWI	GGATC	2 cut(s)	1458, 1691
AcsI	RAATTY	4 cut(s)	147, 827, 1183, 1550
AcuI	CTGAAG	3 cut(s)	566, 1740, 1763
AcyI	GRCGYC	1 cut(s)	303
AfaI	GTAC	4 cut(s)	656, 722, 1200, 1388
AfeI	AGCGCT	1 cut(s)	885
AfiI	CCNNNNNNNGG	2 cut(s)	1132, 1276
AgsI	TTSAA	2 cut(s)	108, 1769
AjnI	CCWGG	4 cut(s)	411, 431, 601, 1394
AjuI	GAANNNNNNNTTGG	2 cut(s)	146, 178
AluBI	AGCT	6 cut(s)	316, 444, 575, 682, 932, 1671
AluI	AGCT	6 cut(s)	316, 444, 575, 682, 932, 1671
Alw26I	GTCTC	2 cut(s)	1169, 1658
AlwI	GGATC	2 cut(s)	1458, 1691
AlwNI	CAGNNNCTG	3 cut(s)	685, 1395, 1786
Ama87I	CYCGRG	2 cut(s)	425, 1211
Aor51HI	AGCGCT	1 cut(s)	885
AoxI	GGCC	7 cut(s)	406, 414, 429, 437, 735, 935, 1207
ApeKI	GCWGC	2 cut(s)	210, 316
ApoI	RAATTY	4 cut(s)	147, 827, 1183, 1550
ArsI	GACNNNNNNTTYG	2 cut(s)	1168, 1200
Asp700I	GAANNNNTTC	2 cut(s)	707, 1038
AspLEI	GCGC	3 cut(s)	886, 1294, 1327
AspS9I	GGNCC	8 cut(s)	8, 175, 406, 415, 438, 935, 1077, 1208
AsuHPI	GGTGA	6 cut(s)	55, 151, 1576, 1660, 1727, 1829
AvaI	CYCGRG	2 cut(s)	425, 1211
AvaII	GGWCC	3 cut(s)	8, 175, 1077
BauI	CACGAG	2 cut(s)	452, 840
BbsI	GAAGAC	1 cut(s)	932
BbvI	GCAGC	2 cut(s)	197, 303
BccI	CCATC	7 cut(s)	344, 629, 787, 1138, 1400, 1555, 1712
BceAI	ACGGC	2 cut(s)	275, 1790
BcgI	CGANNNNNNTGC	2 cut(s)	1582, 1616
BciT130I	CCWGG	4 cut(s)	413, 433, 603, 1396
BclI	TGATCA	1 cut(s)	1257
BcoDI	GTCTC	2 cut(s)	1169, 1658
BfaI	CTAG	1 cut(s)	1577
BfmI	CTRYAG	1 cut(s)	317
BfoI	RGCGCY	1 cut(s)	887
BfuAI	ACCTGC	1 cut(s)	1717
BisI	GCNGC	5 cut(s)	211, 228, 231, 317, 494
BlsI	GCNGC	5 cut(s)	212, 229, 232, 318, 495
Bme1390I	CCNGG	4 cut(s)	413, 433, 603, 1396
Bme18I	GGWCC	3 cut(s)	8, 175, 1077
BmeT110I	CYCGRG	2 cut(s)	425, 1211
BmgT120I	GGNCC	8 cut(s)	8, 175, 406, 415, 438, 935, 1077, 1208
BmiI	GGNNCC	4 cut(s)	9, 10, 1078, 1210
BmrFI	CCNGG	4 cut(s)	413, 433, 603, 1396
BmrI	ACTGGG	3 cut(s)	412, 786, 1796
BmsI	GCATC	1 cut(s)	895
BmuI	ACTGGG	3 cut(s)	412, 786, 1796
BpiI	GAAGAC	1 cut(s)	932
BpmI	CTGGAG	2 cut(s)	395, 1298
BpuEI	CTTGAG	2 cut(s)	497, 992
Bsa29I	ATCGAT	1 cut(s)	1686
BsaHI	GRCGYC	1 cut(s)	303
BsaJI	CCNNGG	4 cut(s)	590, 698, 815, 1395
BsaWI	WCCGGW	1 cut(s)	390
Bsc4I	CCNNNNNNNGG	2 cut(s)	1132, 1276
Bse1I	ACTGG	7 cut(s)	418, 666, 781, 1253, 1421, 1500, 1791
Bse3DI	GCAATG	1 cut(s)	1563
BseBI	CCWGG	4 cut(s)	413, 433, 603, 1396
BseCI	ATCGAT	1 cut(s)	1686
BseDI	CCNNGG	4 cut(s)	590, 698, 815, 1395
BseGI	GGATG	6 cut(s)	637, 961, 1249, 1411, 1537, 1810
BseLI	CCNNNNNNNGG	2 cut(s)	1132, 1276
BseMI	GCAATG	1 cut(s)	1563
BseMII	CTCAG	1 cut(s)	1497
BseNI	ACTGG	7 cut(s)	418, 666, 781, 1253, 1421, 1500, 1791
BseRI	GAGGAG	4 cut(s)	29, 32, 35, 76
BseXI	GCAGC	2 cut(s)	197, 303
BseYI	CCCAGC	2 cut(s)	440, 932
BsgI	GTGCAG	1 cut(s)	1115
Bsh1236I	CGCG	3 cut(s)	328, 404, 461
Bsh1285I	CGRYCG	1 cut(s)	310
BshFI	GGCC	7 cut(s)	408, 416, 431, 439, 737, 937, 1209
BshVI	ATCGAT	1 cut(s)	1686
BsiEI	CGRYCG	1 cut(s)	310
BsiHKCI	CYCGRG	2 cut(s)	425, 1211
BsiSI	CCGG	1 cut(s)	391
BslFI	GGGAC	3 cut(s)	21, 278, 998
BslI	CCNNNNNNNGG	2 cut(s)	1132, 1276
BsmAI	GTCTC	2 cut(s)	1169, 1658
BsmFI	GGGAC	3 cut(s)	21, 278, 998
BsmI	GAATGC	2 cut(s)	333, 1315
BsnI	GGCC	7 cut(s)	408, 416, 431, 439, 737, 937, 1209
BsoBI	CYCGRG	2 cut(s)	425, 1211
Bsp143I	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
BspACI	CCGC	9 cut(s)	57, 190, 208, 217, 228, 231, 404, 494, 1270
BspANI	GGCC	7 cut(s)	408, 416, 431, 439, 737, 937, 1209
BspCNI	CTCAG	1 cut(s)	1496
BspDI	ATCGAT	1 cut(s)	1686
BspFNI	CGCG	3 cut(s)	328, 404, 461
BspLI	GGNNCC	4 cut(s)	9, 10, 1078, 1210
BspMAI	CTGCAG	1 cut(s)	321
BspMI	ACCTGC	1 cut(s)	1717
BspPI	GGATC	2 cut(s)	1458, 1691
BsrBI	CCGCTC	2 cut(s)	219, 496
BsrDI	GCAATG	1 cut(s)	1563
BsrI	ACTGG	7 cut(s)	418, 666, 781, 1253, 1421, 1500, 1791
BssECI	CCNNGG	4 cut(s)	590, 698, 815, 1395
BssMI	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
BssNI	GRCGYC	1 cut(s)	303
BssSI	CACGAG	2 cut(s)	452, 840
BssT1I	CCWWGG	2 cut(s)	590, 698
Bst2BI	CACGAG	2 cut(s)	452, 840
Bst2UI	CCWGG	4 cut(s)	413, 433, 603, 1396
Bst4CI	ACNGT	7 cut(s)	21, 816, 996, 1111, 1391, 1694, 1801
Bst6I	CTCTTC	2 cut(s)	53, 1237
BstACI	GRCGYC	1 cut(s)	303
BstC8I	GCNNGC	2 cut(s)	314, 406
BstDEI	CTNAG	2 cut(s)	887, 1483
BstDSI	CCRYGG	1 cut(s)	815
BstF5I	GGATG	6 cut(s)	637, 961, 1249, 1411, 1537, 1810
BstFNI	CGCG	3 cut(s)	328, 404, 461
BstH2I	RGCGCY	1 cut(s)	887
BstHHI	GCGC	3 cut(s)	886, 1294, 1327
BstKTI	GATC	7 cut(s)	310, 451, 1006, 1234, 1260, 1453, 1686
BstMAI	GTCTC	2 cut(s)	1169, 1658
BstMBI	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
BstMCI	CGRYCG	1 cut(s)	310
BstMWI	GCNNNNNNNGC	3 cut(s)	216, 325, 890
BstNI	CCWGG	4 cut(s)	413, 433, 603, 1396
BstNSI	RCATGY	2 cut(s)	991, 1417
BstSCI	CCNGG	4 cut(s)	411, 431, 601, 1394
BstSFI	CTRYAG	1 cut(s)	317
BstUI	CGCG	3 cut(s)	328, 404, 461
BstV1I	GCAGC	2 cut(s)	197, 303
BstV2I	GAAGAC	1 cut(s)	932
BstXI	CCANNNNNNTGG	1 cut(s)	665
Bsu15I	ATCGAT	1 cut(s)	1686
BsuRI	GGCC	7 cut(s)	408, 416, 431, 439, 737, 937, 1209
BsuTUI	ATCGAT	1 cut(s)	1686
BtgI	CCRYGG	1 cut(s)	815
BtsCI	GGATG	6 cut(s)	637, 961, 1249, 1411, 1537, 1810
BtsI	GCAGTG	1 cut(s)	1435
BtsIMutI	CAGTG	4 cut(s)	425, 1260, 1435, 1507
BveI	ACCTGC	1 cut(s)	1717
Cac8I	GCNNGC	2 cut(s)	314, 406
CaiI	CAGNNNCTG	3 cut(s)	685, 1395, 1786
CfoI	GCGC	3 cut(s)	886, 1294, 1327
Cfr13I	GGNCC	8 cut(s)	8, 175, 406, 415, 438, 935, 1077, 1208
ClaI	ATCGAT	1 cut(s)	1686
CseI	GACGC	3 cut(s)	311, 317, 1442
Csp6I	GTAC	4 cut(s)	655, 721, 1199, 1387
CviAII	CATG	7 cut(s)	766, 875, 988, 1309, 1322, 1414, 1745
CviQI	GTAC	4 cut(s)	655, 721, 1199, 1387
DdeI	CTNAG	2 cut(s)	887, 1483
DpnI	GATC	7 cut(s)	309, 450, 1005, 1233, 1259, 1452, 1685
DpnII	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
DrdI	GACNNNNNNGTC	1 cut(s)	1439
DseDI	GACNNNNNNGTC	1 cut(s)	1439
Eam1104I	CTCTTC	2 cut(s)	53, 1237
EarI	CTCTTC	2 cut(s)	53, 1237
EciI	GGCGGA	1 cut(s)	46
Eco130I	CCWWGG	2 cut(s)	590, 698
Eco147I	AGGCCT	1 cut(s)	431
Eco47I	GGWCC	3 cut(s)	8, 175, 1077
Eco47III	AGCGCT	1 cut(s)	885
Eco57I	CTGAAG	3 cut(s)	566, 1740, 1763
Eco88I	CYCGRG	2 cut(s)	425, 1211
EcoO109I	RGGNCCY	2 cut(s)	8, 175
EcoRII	CCWGG	4 cut(s)	411, 431, 601, 1394
EcoT14I	CCWWGG	2 cut(s)	590, 698
ErhI	CCWWGG	2 cut(s)	590, 698
FaeI	CATG	7 cut(s)	769, 878, 991, 1312, 1325, 1417, 1748
FaqI	GGGAC	3 cut(s)	21, 278, 998
FatI	CATG	7 cut(s)	765, 874, 987, 1308, 1321, 1413, 1744
FauI	CCCGC	2 cut(s)	215, 397
FauNDI	CATATG	1 cut(s)	1459
FbaI	TGATCA	1 cut(s)	1257
Fnu4HI	GCNGC	5 cut(s)	211, 228, 231, 317, 494
FokI	GGATG	6 cut(s)	644, 968, 1236, 1418, 1544, 1817
Fsp4HI	GCNGC	5 cut(s)	211, 228, 231, 317, 494
FspAI	RTGCGCAY	1 cut(s)	1326
FspBI	CTAG	1 cut(s)	1577
FspI	TGCGCA	1 cut(s)	1326
GlaI	GCGC	3 cut(s)	885, 1293, 1326
GluI	GCNGC	5 cut(s)	211, 228, 231, 317, 494
GsaI	CCCAGC	2 cut(s)	444, 936
GsuI	CTGGAG	2 cut(s)	395, 1298
HaeII	RGCGCY	1 cut(s)	887
HaeIII	GGCC	7 cut(s)	408, 416, 431, 439, 737, 937, 1209
HapII	CCGG	1 cut(s)	391
HgaI	GACGC	3 cut(s)	311, 317, 1442
HhaI	GCGC	3 cut(s)	886, 1294, 1327
Hin1I	GRCGYC	1 cut(s)	303
Hin1II	CATG	7 cut(s)	769, 878, 991, 1312, 1325, 1417, 1748
Hin6I	GCGC	3 cut(s)	884, 1292, 1325
HinP1I	GCGC	3 cut(s)	884, 1292, 1325
HindIII	AAGCTT	1 cut(s)	1669
HpaII	CCGG	1 cut(s)	391
HphI	GGTGA	6 cut(s)	55, 151, 1576, 1660, 1727, 1829
Hpy166II	GTNNAC	5 cut(s)	256, 608, 1080, 1376, 1567
Hpy188I	TCNGA	8 cut(s)	247, 448, 522, 1031, 1219, 1450, 1486, 1759
Hpy188III	TCNNGA	9 cut(s)	338, 452, 514, 968, 1043, 1085, 1277, 1658, 1781
Hpy8I	GTNNAC	5 cut(s)	256, 608, 1080, 1376, 1567
Hpy99I	CGWCG	4 cut(s)	251, 302, 305, 333
HpyAV	CCTTC	2 cut(s)	76, 172
HpyCH4III	ACNGT	7 cut(s)	21, 816, 996, 1111, 1391, 1694, 1801
HpyCH4V	TGCA	5 cut(s)	319, 385, 991, 1096, 1556
HpyF10VI	GCNNNNNNNGC	3 cut(s)	216, 325, 890
HpyF3I	CTNAG	2 cut(s)	887, 1483
Hsp92I	GRCGYC	1 cut(s)	303
Hsp92II	CATG	7 cut(s)	769, 878, 991, 1312, 1325, 1417, 1748
HspAI	GCGC	3 cut(s)	884, 1292, 1325
KflI	GGGWCCC	1 cut(s)	8
Ksp22I	TGATCA	1 cut(s)	1257
Kzo9I	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
LmnI	GCTCC	5 cut(s)	42, 224, 449, 572, 1289
Lsp1109I	GCAGC	2 cut(s)	197, 303
LweI	GCATC	1 cut(s)	895
MaeI	CTAG	1 cut(s)	1577
MaeIII	GTNAC	4 cut(s)	769, 1430, 1740, 1835
MalI	GATC	7 cut(s)	309, 450, 1005, 1233, 1259, 1452, 1685
MbiI	CCGCTC	2 cut(s)	219, 496
MboI	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
MboII	GAAGA	8 cut(s)	40, 61, 485, 814, 937, 1254, 1503, 1663
MfeI	CAATTG	1 cut(s)	626
MlyI	GAGTC	7 cut(s)	191, 332, 388, 639, 1171, 1223, 1454
MmeI	TCCRAC	2 cut(s)	270, 1428
MroXI	GAANNNNTTC	2 cut(s)	707, 1038
MseI	TTAA	5 cut(s)	126, 747, 825, 852, 1581
MslI	CAYNNNNRTG	4 cut(s)	840, 903, 1320, 1458
MspA1I	CMGCKG	2 cut(s)	210, 932
MspI	CCGG	1 cut(s)	391
MspR9I	CCNGG	4 cut(s)	413, 433, 603, 1396
MunI	CAATTG	1 cut(s)	626
Mva1269I	GAATGC	2 cut(s)	333, 1315
MvaI	CCWGG	4 cut(s)	413, 433, 603, 1396
MvnI	CGCG	3 cut(s)	328, 404, 461
MwoI	GCNNNNNNNGC	3 cut(s)	216, 325, 890
NdeI	CATATG	1 cut(s)	1459
NdeII	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
NlaIII	CATG	7 cut(s)	769, 878, 991, 1312, 1325, 1417, 1748
NlaIV	GGNNCC	4 cut(s)	9, 10, 1078, 1210
NmuCI	GTSAC	3 cut(s)	1430, 1740, 1835
NsbI	TGCGCA	1 cut(s)	1326
NspI	RCATGY	2 cut(s)	991, 1417
PaeR7I	CTCGAG	1 cut(s)	425
PaqCI	CACCTGC	1 cut(s)	1717
PceI	AGGCCT	1 cut(s)	431
PcsI	WCGNNNNNNNCGW	4 cut(s)	231, 294, 354, 1440
PctI	GAATGC	2 cut(s)	333, 1315
PdmI	GAANNNNTTC	2 cut(s)	707, 1038
PfeI	GAWTC	5 cut(s)	354, 517, 941, 1088, 1654
PflFI	GACNNNGTC	3 cut(s)	251, 344, 377
PkrI	GCNGC	5 cut(s)	212, 229, 232, 318, 495
Ple19I	CGATCG	1 cut(s)	310
PleI	GAGTC	7 cut(s)	191, 331, 388, 639, 1171, 1222, 1453
PpsI	GAGTC	7 cut(s)	191, 331, 388, 639, 1171, 1222, 1453
PpuMI	RGGWCCY	2 cut(s)	8, 175
Psp5II	RGGWCCY	2 cut(s)	8, 175
Psp6I	CCWGG	4 cut(s)	411, 431, 601, 1394
PspFI	CCCAGC	2 cut(s)	440, 932
PspGI	CCWGG	4 cut(s)	411, 431, 601, 1394
PspN4I	GGNNCC	4 cut(s)	9, 10, 1078, 1210
PspPI	GGNCC	8 cut(s)	8, 175, 406, 415, 438, 935, 1077, 1208
PspPPI	RGGWCCY	2 cut(s)	8, 175
PspXI	VCTCGAGB	1 cut(s)	425
PstI	CTGCAG	1 cut(s)	321
PstNI	CAGNNNCTG	3 cut(s)	685, 1395, 1786
PsyI	GACNNNGTC	3 cut(s)	251, 344, 377
PvuI	CGATCG	1 cut(s)	310
PvuII	CAGCTG	1 cut(s)	932
RsaI	GTAC	4 cut(s)	656, 722, 1200, 1388
RsaNI	GTAC	4 cut(s)	655, 721, 1199, 1387
RseI	CAYNNNNRTG	4 cut(s)	840, 903, 1320, 1458
SaqAI	TTAA	5 cut(s)	126, 747, 825, 852, 1581
SatI	GCNGC	5 cut(s)	211, 228, 231, 317, 494
Sau3AI	GATC	7 cut(s)	307, 448, 1003, 1231, 1257, 1450, 1683
Sau96I	GGNCC	8 cut(s)	8, 175, 406, 415, 438, 935, 1077, 1208
SchI	GAGTC	7 cut(s)	191, 332, 388, 639, 1171, 1223, 1454
ScrFI	CCNGG	4 cut(s)	413, 433, 603, 1396
SfaNI	GCATC	1 cut(s)	895
SfcI	CTRYAG	1 cut(s)	317
Sfr274I	CTCGAG	1 cut(s)	425
SinI	GGWCC	3 cut(s)	8, 175, 1077
SlaI	CTCGAG	1 cut(s)	425
SmiMI	CAYNNNNRTG	4 cut(s)	840, 903, 1320, 1458
SmlI	CTYRAG	3 cut(s)	425, 512, 1007
SmoI	CTYRAG	3 cut(s)	425, 512, 1007
SseBI	AGGCCT	1 cut(s)	431
SsiI	CCGC	9 cut(s)	57, 190, 208, 217, 228, 231, 404, 494, 1270
SspI	AATATT	2 cut(s)	1038, 1344
SspMI	CTAG	1 cut(s)	1577
StuI	AGGCCT	1 cut(s)	431
StyD4I	CCNGG	4 cut(s)	411, 431, 601, 1394
StyI	CCWWGG	2 cut(s)	590, 698
TaaI	ACNGT	7 cut(s)	21, 816, 996, 1111, 1391, 1694, 1801
TaqI	TCGA	8 cut(s)	195, 348, 357, 426, 1230, 1443, 1519, 1686
TatI	WGTACW	1 cut(s)	1198
TauI	GCSGC	3 cut(s)	230, 233, 496
TfiI	GAWTC	5 cut(s)	354, 517, 941, 1088, 1654
Tru1I	TTAA	5 cut(s)	126, 747, 825, 852, 1581
Tru9I	TTAA	5 cut(s)	126, 747, 825, 852, 1581
TscAI	CASTG	4 cut(s)	425, 1260, 1435, 1507
TseFI	GTSAC	3 cut(s)	1430, 1740, 1835
TseI	GCWGC	2 cut(s)	210, 316
Tsp45I	GTSAC	3 cut(s)	1430, 1740, 1835
TspDTI	ATGAA	9 cut(s)	154, 811, 820, 824, 891, 972, 1083, 1325, 1353
TspRI	CASTG	4 cut(s)	425, 1260, 1435, 1507
Tth111I	GACNNNGTC	3 cut(s)	251, 344, 377
VpaK11BI	GGWCC	3 cut(s)	8, 175, 1077
XapI	RAATTY	4 cut(s)	147, 827, 1183, 1550
XceI	RCATGY	2 cut(s)	991, 1417
XhoI	CTCGAG	1 cut(s)	425
XmnI	GAANNNNTTC	2 cut(s)	707, 1038
XspI	CTAG	1 cut(s)	1577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.