Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002619

Physical Location & Seq

Genomic Coordinates Forward (+)

22932731 .. 22948933

Gene Structure 16203 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00235810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGATCAAGACTTGTCTTGCCTGACCAATAGAGTTGCTATTATTCATAATTATTTATATGAATATAATGTGGATATGCCATCGCCAACCCAAACGTTCAGCAGAAATGGTGGGATTGAAAACACACTTGCTTCCACTCCTCCTCTTCTCTCTCTCCGCCCTCTTCTTCTTCTCCTACTTCCACTCCTCCCTCCCCTCCTCTCCTCCCCACACCCAAACCCTAACCCTAATTTCACCCTCCACCCCCAAAACCCCGATTTCACTTTCATCATCAAGCTCCTCGCCTACAACCGCCTCGACTCCCTCTCCCGCTGCCTCCGCTCCCTCGCCGCCGCCGACTACCTCTCCGACCGCGTCCACCTCCACGTCCACATTGACCATTTTGCCCTCCCCGACGACGACGCGGATCGCAAGCTGCTGGAGTCGCGTCGGATCCTGGACTTCGTCGATGGGTTCGAGTGGAGGTTCGGAGAGAAGGTCGTGCACTACCGGACTGCGAATGTGGGCCTCCAGGCCCAGTGGCTCGAGGCCTGGTGGCCCAGCTCCGATCACGAGTTCGCTTTCGTTGTGGAAGATGACTTGGAGGTGTCGCCGCTCTATTACAAGTTTCTCAAGAATCTGATTCTGAATTACTATTACAATGCCTCCAATTTCCGCCCTTACATCTATGGAGCTTCGCTACAGAGACCAAGGTTTGTTCCAGGTAAACACGGGAACAAACTAAAATTGGATGATAGAACACGGCTCTTTCTATACCAACTGGTTGGTACTTGGGGTCAACTTCTCTTTCCGAAACCTTGGAAAGAGTTCAGGTTGTGGTACGACAAAAACAAGGCAAAAGGCATTAAGCCATATCTCGATGGCATGGTGACTACTGGGTGGTATAAAAAGATCGGAGAGAAGATATGGACACCTTGGTTTATTAAATTCATTCACACTCGTGGCTATTTCAATATCTACACCAACTTTTTACATGAGAGAGCGCTTAGCGTCTCTCACAGAGATGCTGGTGTTAATTATGGGAAAACAGCTGGGCCTGATTCACATATATTGGATGAAAGTTCTCTTGAATTTAAGTTCTGGGATATGCAACCGTTGGGTGATCTCAAGTGGTATGATTTTTGTTTCAGAGAAATATTTCCTGAAAGAGTAATTGCGAGCCTTGAAGAACTTGGGTCTGTTCTTAATTCTGTGCAGAAACACAACAATGTTATTTTTGTCAGCCTGTTTGGGGTTAAAGAGATGGTAATAAGCAACTTGCTCTGCCACTTTGAGAGTCTAAATTTGCGGAACTATATACTTATTGGCCTCGAGTCTGAATTCCTGTTTGATCTGGCAAGAAGAGGACATACAGTGATCATTACGAACCGGTTTCTGGAGAGTGTAGGAGCTTATAAATTGCTTACTGTGCACAATTCTTATGTGCAAGTGATCAGTGAAATATTAGTGAAAGTCTATGTATTACAAAAGTGTTTTGAATCTAGTTACAGTTCCTGGGTGGTGGATGGGAACATGCTTCCAGTCAGCATTGATGCATTTGTCGTCGAGTCTGATTCCTCATATGATTTCTATATTGGTACGAGCTCAGAACTTTTCTTTGCCAGAGGGTCAAAAGATGTTTGGGGTACTGATTTCATATCAAAATTTGCAATGATGGTGAACTCTCTGCTTGTTAGGCAACAGAGCATAAGTTTTGGGTATGTAATGGCCAAGTTCTTGGAACTGAAGAAGGGTGTGAGAGTGAACACTCTCGATGAGACAAGCTTTGGTCTTAGGATTGATAACAGTAATGTTAATCAATCTTTGGGTGATGGAAAGAAGATAGTATTTTGGCCTAACGATATGGCTTCAGATATTGTTCAGAAGCGGCTTCAAGAAATCGGTATTTGGGTTATAAATGATGACTCTTCTTGTAAGGCTGTTGTTTGCCACCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

645

Amino Acids

74.57

Weight (kDa)

6.69

Isoelectric Point (pI)

35.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002619)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12260
fragaria_vesca	FvH4_5g29830 FvH4_5g29830 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910 FvH4_7g06910
malus_domestica	MD10G1340300.v1.1 MD13G1224500.v1.1 MD13G1224600.v1.1
prunus_persica	Prupe.1G051200_v2.0.a1 Prupe.1G051200_v2.0.a1
pyrus_communis	pycom13g19820 pycom16g19110
rosa_chinensis	RchiOBHm_Chr1g0336841 RchiOBHm_Chr7g0223431
rosa_laevigata	RLG00000001965 RLG00000029331 RLG00000029333
rosa_multiflora	Rmu_co8498753.1_g000002 Rmu_sc0007408.1_g000014
rosa_roxburghii	Rroxscaffold_3G00235810 Rroxscaffold_4G00315310
rosa_rugosa	Rorug01G0128200 Rorug07G0216600 Rorug07G0216600 Rorug07G0216600 Rorug07G0216600
rosa_samantha	Rh1AG149000 Rh1BG117100 Rh1CG140300 Rh1DG156300 Rh7AG360300 Rh7BG350400 Rh7CG378900 Rh7DG355800
rosa_wichuraiana	Rw1G012050 Rw1G012060 Rw7G030630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1395, 1895
AccBSI	CCGCTC	2 cut(s)	321, 595
AccII	CGCG	3 cut(s)	354, 404, 427
AclI	AACGTT	1 cut(s)	95
AclWI	GGATC	4 cut(s)	12, 414, 427, 440
AcoI	YGGCCR	1 cut(s)	1707
AcsI	RAATTY	5 cut(s)	926, 1070, 1282, 1319, 1643
AcuI	CTGAAG	2 cut(s)	1745, 1833
AfaI	GTAC	4 cut(s)	769, 821, 1579, 1627
AfeI	AGCGCT	1 cut(s)	984
AfiI	CCNNNNNNNGG	2 cut(s)	1231, 1375
AgeI	ACCGGT	2 cut(s)	1368, 1932
AgsI	TTSAA	6 cut(s)	119, 952, 1070, 1166, 1478, 1874
AjiI	CACGTC	1 cut(s)	367
AjnI	CCWGG	5 cut(s)	435, 510, 530, 700, 1493
AleI	CACNNNNGTG	1 cut(s)	939
AluBI	AGCT	8 cut(s)	277, 415, 543, 674, 1031, 1391, 1584, 1764
AluI	AGCT	8 cut(s)	277, 415, 543, 674, 1031, 1391, 1584, 1764
Alw21I	GWGCWC	3 cut(s)	486, 1413, 1586
Alw26I	GTCTC	3 cut(s)	679, 997, 1751
Alw44I	GTGCAC	2 cut(s)	482, 1409
AlwI	GGATC	4 cut(s)	12, 414, 427, 440
AlwNI	CAGNNNCTG	1 cut(s)	1494
Ama87I	CYCGRG	2 cut(s)	524, 1310
Aor51HI	AGCGCT	1 cut(s)	984
AoxI	GGCC	8 cut(s)	505, 513, 528, 536, 1034, 1306, 1707, 1832
ApaLI	GTGCAC	2 cut(s)	482, 1409
ApeKI	GCWGC	2 cut(s)	312, 415
ApoI	RAATTY	5 cut(s)	926, 1070, 1282, 1319, 1643
AsiGI	ACCGGT	2 cut(s)	1368, 1932
Asp700I	GAANNNNTTC	2 cut(s)	806, 1137
AspLEI	GCGC	1 cut(s)	985
AspS9I	GGNCC	4 cut(s)	505, 514, 537, 1034
AsuHPI	GGTGA	5 cut(s)	226, 880, 1112, 1669, 1820
AvaI	CYCGRG	2 cut(s)	524, 1310
BaeGI	GKGCMC	2 cut(s)	486, 1413
BalI	TGGCCA	1 cut(s)	1709
BamHI	GGATCC	1 cut(s)	432
BanII	GRGCYC	1 cut(s)	1586
BarI	GAAGNNNNNNTAC	2 cut(s)	1333, 1365
BauI	CACGAG	2 cut(s)	551, 939
Bbv12I	GWGCWC	3 cut(s)	486, 1413, 1586
BbvI	GCAGC	2 cut(s)	299, 402
BccI	CCATC	7 cut(s)	88, 443, 854, 1237, 1499, 1648, 1805
BceAI	ACGGC	1 cut(s)	758
BciT130I	CCWGG	5 cut(s)	437, 512, 532, 702, 1495
BclI	TGATCA	2 cut(s)	1356, 1431
BcoDI	GTCTC	3 cut(s)	679, 997, 1751
BfaI	CTAG	1 cut(s)	1482
BfmI	CTRYAG	1 cut(s)	680
BfoI	RGCGCY	1 cut(s)	986
BisI	GCNGC	6 cut(s)	313, 330, 333, 416, 593, 1868
BlpI	GCTNAGC	1 cut(s)	986
BlsI	GCNGC	6 cut(s)	314, 331, 334, 417, 594, 1869
Bme1390I	CCNGG	5 cut(s)	437, 512, 532, 702, 1495
BmeT110I	CYCGRG	2 cut(s)	524, 1310
BmgBI	CACGTC	1 cut(s)	367
BmgT120I	GGNCC	4 cut(s)	505, 514, 537, 1034
BmiI	GGNNCC	1 cut(s)	434
BmrFI	CCNGG	5 cut(s)	437, 512, 532, 702, 1495
BmrI	ACTGGG	2 cut(s)	511, 885
BmsI	GCATC	2 cut(s)	994, 1522
BmuI	ACTGGG	2 cut(s)	511, 885
BpmI	CTGGAG	3 cut(s)	440, 494, 1397
Bpu1102I	GCTNAGC	1 cut(s)	986
BpuEI	CTTGAG	2 cut(s)	596, 1091
BsaI	GGTCTC	1 cut(s)	679
BsaJI	CCNNGG	4 cut(s)	689, 797, 914, 1494
BsaWI	WCCGGW	3 cut(s)	489, 1368, 1932
Bsc4I	CCNNNNNNNGG	2 cut(s)	1231, 1375
Bse118I	RCCGGY	2 cut(s)	1368, 1932
Bse1I	ACTGG	4 cut(s)	517, 765, 880, 1520
Bse3DI	GCAATG	1 cut(s)	1656
BseBI	CCWGG	5 cut(s)	437, 512, 532, 702, 1495
BseDI	CCNNGG	4 cut(s)	689, 797, 914, 1494
BseGI	GGATG	3 cut(s)	736, 1060, 1510
BseLI	CCNNNNNNNGG	2 cut(s)	1231, 1375
BseMI	GCAATG	1 cut(s)	1656
BseMII	CTCAG	1 cut(s)	1599
BseNI	ACTGG	4 cut(s)	517, 765, 880, 1520
BseRI	GAGGAG	6 cut(s)	129, 132, 176, 188, 193, 269
BseSI	GKGCMC	2 cut(s)	486, 1413
BseXI	GCAGC	2 cut(s)	299, 402
BseYI	CCCAGC	2 cut(s)	539, 1031
BsgI	GTGCAG	1 cut(s)	1214
Bsh1236I	CGCG	3 cut(s)	354, 404, 427
Bsh1285I	CGRYCG	1 cut(s)	352
BshFI	GGCC	8 cut(s)	507, 515, 530, 538, 1036, 1308, 1709, 1834
BshTI	ACCGGT	2 cut(s)	1368, 1932
BsiEI	CGRYCG	1 cut(s)	352
BsiHKAI	GWGCWC	3 cut(s)	486, 1413, 1586
BsiHKCI	CYCGRG	2 cut(s)	524, 1310
BsiSI	CCGG	3 cut(s)	490, 1369, 1933
BslI	CCNNNNNNNGG	2 cut(s)	1231, 1375
BsmAI	GTCTC	3 cut(s)	679, 997, 1751
BsmBI	CGTCTC	1 cut(s)	997
BsnI	GGCC	8 cut(s)	507, 515, 530, 538, 1036, 1308, 1709, 1834
Bso31I	GGTCTC	1 cut(s)	679
BsoBI	CYCGRG	2 cut(s)	524, 1310
Bsp1286I	GDGCHC	3 cut(s)	486, 1413, 1586
Bsp143I	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
Bsp1720I	GCTNAGC	1 cut(s)	986
BspANI	GGCC	8 cut(s)	507, 515, 530, 538, 1036, 1308, 1709, 1834
BspCNI	CTCAG	1 cut(s)	1598
BspFNI	CGCG	3 cut(s)	354, 404, 427
BspLI	GGNNCC	1 cut(s)	434
BspPI	GGATC	4 cut(s)	12, 414, 427, 440
BspTNI	GGTCTC	1 cut(s)	679
BsrBI	CCGCTC	2 cut(s)	321, 595
BsrDI	GCAATG	1 cut(s)	1656
BsrFI	RCCGGY	2 cut(s)	1368, 1932
BsrI	ACTGG	4 cut(s)	517, 765, 880, 1520
BssAI	RCCGGY	2 cut(s)	1368, 1932
BssECI	CCNNGG	4 cut(s)	689, 797, 914, 1494
BssMI	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
BssSI	CACGAG	2 cut(s)	551, 939
BssT1I	CCWWGG	3 cut(s)	689, 797, 914
Bst2BI	CACGAG	2 cut(s)	551, 939
Bst2UI	CCWGG	5 cut(s)	437, 512, 532, 702, 1495
Bst4CI	ACNGT	5 cut(s)	1095, 1354, 1408, 1490, 1787
Bst6I	CTCTTC	4 cut(s)	150, 168, 1336, 1912
BstC8I	GCNNGC	2 cut(s)	413, 1159
BstDEI	CTNAG	3 cut(s)	986, 1585, 1772
BstF5I	GGATG	3 cut(s)	736, 1060, 1510
BstFNI	CGCG	3 cut(s)	354, 404, 427
BstH2I	RGCGCY	1 cut(s)	986
BstHHI	GCGC	1 cut(s)	985
BstKTI	GATC	9 cut(s)	7, 409, 435, 550, 894, 1105, 1333, 1359, 1434
BstMAI	GTCTC	3 cut(s)	679, 997, 1751
BstMBI	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
BstMCI	CGRYCG	1 cut(s)	352
BstMWI	GCNNNNNNNGC	4 cut(s)	318, 424, 1408, 1675
BstNI	CCWGG	5 cut(s)	437, 512, 532, 702, 1495
BstNSI	RCATGY	1 cut(s)	1516
BstSCI	CCNGG	5 cut(s)	435, 510, 530, 700, 1493
BstSFI	CTRYAG	1 cut(s)	680
BstSLI	GKGCMC	2 cut(s)	486, 1413
BstUI	CGCG	3 cut(s)	354, 404, 427
BstV1I	GCAGC	2 cut(s)	299, 402
BstX2I	RGATCY	1 cut(s)	432
BstXI	CCANNNNNNTGG	2 cut(s)	764, 1717
BstYI	RGATCY	1 cut(s)	432
BsuRI	GGCC	8 cut(s)	507, 515, 530, 538, 1036, 1308, 1709, 1834
BtgZI	GCGATG	1 cut(s)	66
BtrI	CACGTC	1 cut(s)	367
BtsCI	GGATG	3 cut(s)	736, 1060, 1510
BtsIMutI	CAGTG	3 cut(s)	524, 1359, 1441
Cac8I	GCNNGC	2 cut(s)	413, 1159
CaiI	CAGNNNCTG	1 cut(s)	1494
CfoI	GCGC	1 cut(s)	985
Cfr10I	RCCGGY	2 cut(s)	1368, 1932
Cfr13I	GGNCC	4 cut(s)	505, 514, 537, 1034
CseI	GACGC	4 cut(s)	343, 410, 416, 979
Csp6I	GTAC	4 cut(s)	768, 820, 1578, 1626
CspAI	ACCGGT	2 cut(s)	1368, 1932
CviAII	CATG	3 cut(s)	865, 974, 1513
CviQI	GTAC	4 cut(s)	768, 820, 1578, 1626
DdeI	CTNAG	3 cut(s)	986, 1585, 1772
DpnI	GATC	9 cut(s)	6, 408, 434, 549, 893, 1104, 1332, 1358, 1433
DpnII	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
EaeI	YGGCCR	1 cut(s)	1707
Eam1104I	CTCTTC	4 cut(s)	150, 168, 1336, 1912
EarI	CTCTTC	4 cut(s)	150, 168, 1336, 1912
EciI	GGCGGA	2 cut(s)	146, 644
Ecl136II	GAGCTC	1 cut(s)	1584
Eco130I	CCWWGG	3 cut(s)	689, 797, 914
Eco147I	AGGCCT	1 cut(s)	530
Eco24I	GRGCYC	1 cut(s)	1586
Eco31I	GGTCTC	1 cut(s)	679
Eco47III	AGCGCT	1 cut(s)	984
Eco53kI	GAGCTC	1 cut(s)	1584
Eco57I	CTGAAG	2 cut(s)	1745, 1833
Eco88I	CYCGRG	2 cut(s)	524, 1310
EcoICRI	GAGCTC	1 cut(s)	1584
EcoRI	GAATTC	1 cut(s)	1319
EcoRII	CCWGG	5 cut(s)	435, 510, 530, 700, 1493
EcoT14I	CCWWGG	3 cut(s)	689, 797, 914
EcoT22I	ATGCAT	1 cut(s)	1537
EcoT38I	GRGCYC	1 cut(s)	1586
ErhI	CCWWGG	3 cut(s)	689, 797, 914
Esp3I	CGTCTC	1 cut(s)	997
FaeI	CATG	3 cut(s)	868, 977, 1516
FatI	CATG	3 cut(s)	864, 973, 1512
FauI	CCCGC	1 cut(s)	317
FauNDI	CATATG	1 cut(s)	1561
FbaI	TGATCA	2 cut(s)	1356, 1431
Fnu4HI	GCNGC	6 cut(s)	313, 330, 333, 416, 593, 1868
FokI	GGATG	3 cut(s)	743, 1067, 1517
FriOI	GRGCYC	1 cut(s)	1586
Fsp4HI	GCNGC	6 cut(s)	313, 330, 333, 416, 593, 1868
FspBI	CTAG	1 cut(s)	1482
GlaI	GCGC	1 cut(s)	984
GluI	GCNGC	6 cut(s)	313, 330, 333, 416, 593, 1868
GsaI	CCCAGC	2 cut(s)	543, 1035
GsuI	CTGGAG	3 cut(s)	440, 494, 1397
HaeII	RGCGCY	1 cut(s)	986
HaeIII	GGCC	8 cut(s)	507, 515, 530, 538, 1036, 1308, 1709, 1834
HapII	CCGG	3 cut(s)	490, 1369, 1933
HgaI	GACGC	4 cut(s)	343, 410, 416, 979
HhaI	GCGC	1 cut(s)	985
Hin1II	CATG	3 cut(s)	868, 977, 1516
Hin6I	GCGC	1 cut(s)	983
HinP1I	GCGC	1 cut(s)	983
HincII	GTYRAC	1 cut(s)	779
HindII	GTYRAC	1 cut(s)	779
HindIII	AAGCTT	1 cut(s)	1762
HpaII	CCGG	3 cut(s)	490, 1369, 1933
HphI	GGTGA	5 cut(s)	226, 880, 1112, 1669, 1820
Hpy166II	GTNNAC	8 cut(s)	358, 370, 484, 707, 779, 1411, 1660, 1744
Hpy188III	TCNNGA	9 cut(s)	8, 551, 613, 857, 1067, 1142, 1376, 1751, 1874
Hpy8I	GTNNAC	8 cut(s)	358, 370, 484, 707, 779, 1411, 1660, 1744
Hpy99I	CGWCG	6 cut(s)	398, 401, 404, 432, 449, 1547
HpyAV	CCTTC	2 cut(s)	469, 1723
HpyCH4III	ACNGT	5 cut(s)	1095, 1354, 1408, 1490, 1787
HpyCH4IV	ACGT	2 cut(s)	95, 366
HpyCH4V	TGCA	7 cut(s)	484, 1090, 1195, 1411, 1426, 1535, 1649
HpyF10VI	GCNNNNNNNGC	4 cut(s)	318, 424, 1408, 1675
HpyF3I	CTNAG	3 cut(s)	986, 1585, 1772
HpySE526I	ACGT	2 cut(s)	95, 366
Hsp92II	CATG	3 cut(s)	868, 977, 1516
HspAI	GCGC	1 cut(s)	983
Ksp22I	TGATCA	2 cut(s)	1356, 1431
Kzo9I	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
LmnI	GCTCC	5 cut(s)	282, 326, 548, 671, 1388
Lsp1109I	GCAGC	2 cut(s)	299, 402
LweI	GCATC	2 cut(s)	994, 1522
MaeI	CTAG	1 cut(s)	1482
MaeII	ACGT	2 cut(s)	95, 366
MaeIII	GTNAC	2 cut(s)	868, 1484
MalI	GATC	9 cut(s)	6, 408, 434, 549, 893, 1104, 1332, 1358, 1433
MbiI	CCGCTC	2 cut(s)	321, 595
MboI	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
MflI	RGATCY	1 cut(s)	432
MhlI	GDGCHC	3 cut(s)	486, 1413, 1586
MlsI	TGGCCA	1 cut(s)	1709
MluNI	TGGCCA	1 cut(s)	1709
MlyI	GAGTC	6 cut(s)	293, 431, 1285, 1322, 1556, 1898
MmeI	TCCRAC	2 cut(s)	372, 410
Mox20I	TGGCCA	1 cut(s)	1709
Mph1103I	ATGCAT	1 cut(s)	1537
MroXI	GAANNNNTTC	2 cut(s)	806, 1137
MscI	TGGCCA	1 cut(s)	1709
MseI	TTAA	7 cut(s)	846, 924, 1014, 1074, 1185, 1236, 1794
MslI	CAYNNNNRTG	3 cut(s)	939, 1002, 1206
Msp20I	TGGCCA	1 cut(s)	1709
MspA1I	CMGCKG	2 cut(s)	312, 1031
MspI	CCGG	3 cut(s)	490, 1369, 1933
MspR9I	CCNGG	5 cut(s)	437, 512, 532, 702, 1495
MvaI	CCWGG	5 cut(s)	437, 512, 532, 702, 1495
MvnI	CGCG	3 cut(s)	354, 404, 427
MwoI	GCNNNNNNNGC	4 cut(s)	318, 424, 1408, 1675
NdeI	CATATG	1 cut(s)	1561
NdeII	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
NlaIII	CATG	3 cut(s)	868, 977, 1516
NlaIV	GGNNCC	1 cut(s)	434
NmuCI	GTSAC	1 cut(s)	868
NsiI	ATGCAT	1 cut(s)	1537
NspI	RCATGY	1 cut(s)	1516
OliI	CACNNNNGTG	1 cut(s)	939
PaeR7I	CTCGAG	2 cut(s)	524, 1310
PceI	AGGCCT	1 cut(s)	530
PcsI	WCGNNNNNNNCGW	2 cut(s)	333, 453
PdmI	GAANNNNTTC	2 cut(s)	806, 1137
PfeI	GAWTC	5 cut(s)	616, 622, 1040, 1478, 1553
PflFI	GACNNNGTC	2 cut(s)	353, 443
PfoI	TCCNGGA	1 cut(s)	435
PinAI	ACCGGT	2 cut(s)	1368, 1932
PkrI	GCNGC	6 cut(s)	314, 331, 334, 417, 594, 1869
PleI	GAGTC	6 cut(s)	293, 430, 1284, 1321, 1555, 1898
PpsI	GAGTC	6 cut(s)	293, 430, 1284, 1321, 1555, 1898
PsiI	TTATAA	2 cut(s)	1395, 1895
Psp124BI	GAGCTC	1 cut(s)	1586
Psp1406I	AACGTT	1 cut(s)	95
Psp6I	CCWGG	5 cut(s)	435, 510, 530, 700, 1493
PspFI	CCCAGC	2 cut(s)	539, 1031
PspGI	CCWGG	5 cut(s)	435, 510, 530, 700, 1493
PspN4I	GGNNCC	1 cut(s)	434
PspPI	GGNCC	4 cut(s)	505, 514, 537, 1034
PspXI	VCTCGAGB	2 cut(s)	524, 1310
PstNI	CAGNNNCTG	1 cut(s)	1494
PsuI	RGATCY	1 cut(s)	432
PsyI	GACNNNGTC	2 cut(s)	353, 443
PvuII	CAGCTG	1 cut(s)	1031
RsaI	GTAC	4 cut(s)	769, 821, 1579, 1627
RsaNI	GTAC	4 cut(s)	768, 820, 1578, 1626
RseI	CAYNNNNRTG	3 cut(s)	939, 1002, 1206
SacI	GAGCTC	1 cut(s)	1586
SaqAI	TTAA	7 cut(s)	846, 924, 1014, 1074, 1185, 1236, 1794
SatI	GCNGC	6 cut(s)	313, 330, 333, 416, 593, 1868
Sau3AI	GATC	9 cut(s)	4, 406, 432, 547, 891, 1102, 1330, 1356, 1431
Sau96I	GGNCC	4 cut(s)	505, 514, 537, 1034
SchI	GAGTC	6 cut(s)	293, 431, 1285, 1322, 1556, 1898
ScrFI	CCNGG	5 cut(s)	437, 512, 532, 702, 1495
SduI	GDGCHC	3 cut(s)	486, 1413, 1586
SfaNI	GCATC	2 cut(s)	994, 1522
SfcI	CTRYAG	1 cut(s)	680
Sfr274I	CTCGAG	2 cut(s)	524, 1310
SlaI	CTCGAG	2 cut(s)	524, 1310
SmiMI	CAYNNNNRTG	3 cut(s)	939, 1002, 1206
SmlI	CTYRAG	4 cut(s)	524, 611, 1106, 1310
SmoI	CTYRAG	4 cut(s)	524, 611, 1106, 1310
SseBI	AGGCCT	1 cut(s)	530
SspI	AATATT	2 cut(s)	1137, 1443
SspMI	CTAG	1 cut(s)	1482
SstI	GAGCTC	1 cut(s)	1586
StuI	AGGCCT	1 cut(s)	530
StyD4I	CCNGG	5 cut(s)	435, 510, 530, 700, 1493
StyI	CCWWGG	3 cut(s)	689, 797, 914
TaaI	ACNGT	5 cut(s)	1095, 1354, 1408, 1490, 1787
TaiI	ACGT	2 cut(s)	98, 369
TaqI	TCGA	8 cut(s)	297, 447, 456, 525, 858, 1311, 1545, 1752
TauI	GCSGC	4 cut(s)	332, 335, 595, 1870
TfiI	GAWTC	5 cut(s)	616, 622, 1040, 1478, 1553
Tru1I	TTAA	7 cut(s)	846, 924, 1014, 1074, 1185, 1236, 1794
Tru9I	TTAA	7 cut(s)	846, 924, 1014, 1074, 1185, 1236, 1794
TscAI	CASTG	3 cut(s)	524, 1359, 1441
TseFI	GTSAC	1 cut(s)	868
TseI	GCWGC	2 cut(s)	312, 415
Tsp45I	GTSAC	1 cut(s)	868
TspDTI	ATGAA	6 cut(s)	35, 75, 256, 919, 1071, 1624
TspRI	CASTG	3 cut(s)	524, 1359, 1441
Tth111I	GACNNNGTC	2 cut(s)	353, 443
VneI	GTGCAC	2 cut(s)	482, 1409
XapI	RAATTY	5 cut(s)	926, 1070, 1282, 1319, 1643
XceI	RCATGY	1 cut(s)	1516
XhoI	CTCGAG	2 cut(s)	524, 1310
XmnI	GAANNNNTTC	2 cut(s)	806, 1137
XspI	CTAG	1 cut(s)	1482
Zsp2I	ATGCAT	1 cut(s)	1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.