MD13G1250000.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
26526927 .. 26527662
736 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1250000.v1.1.491

Sequence Viewer

Length: 201 bp
ATGGTAGCTTGTGGGATAGATGAAAAAGATAAAGAGATAGCAGAGAGAATGGTAAACGTAGCTCTGTGGTGTACTCAGTATAGGCCGGAGTCGAGGCCTTCGATGAGCGGTGTGGTAAAAGTGTTGGAAGGAGATATTGAGATTCCCAGACCTACAACTAACCCTTTTCAGCACTTTGATTCCAGGCAATCCATACCCTAA

Protein Analysis

67

Amino Acids

7.5

Weight (kDa)

5.21

Isoelectric Point (pI)

69.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 108
AciI CCGC 1 cut(s) 108
AfaI GTAC 1 cut(s) 73
AjnI CCWGG 1 cut(s) 182
AluBI AGCT 2 cut(s) 8, 62
AluI AGCT 2 cut(s) 8, 62
AoxI GGCC 2 cut(s) 83, 95
BciT130I CCWGG 1 cut(s) 184
Bme1390I CCNGG 1 cut(s) 184
BmrFI CCNGG 1 cut(s) 184
BseBI CCWGG 1 cut(s) 184
BseMII CTCAG 1 cut(s) 89
BshFI GGCC 2 cut(s) 85, 97
BsiSI CCGG 1 cut(s) 86
BsnI GGCC 2 cut(s) 85, 97
BspACI CCGC 1 cut(s) 108
BspANI GGCC 2 cut(s) 85, 97
BspCNI CTCAG 1 cut(s) 88
BsrBI CCGCTC 1 cut(s) 108
Bst2UI CCWGG 1 cut(s) 184
BstDEI CTNAG 1 cut(s) 75
BstNI CCWGG 1 cut(s) 184
BstSCI CCNGG 1 cut(s) 182
BsuRI GGCC 2 cut(s) 85, 97
Csp6I GTAC 1 cut(s) 72
CviJI RGCY 4 cut(s) 8, 62, 85, 97
CviKI_1 RGCY 4 cut(s) 8, 62, 85, 97
CviQI GTAC 1 cut(s) 72
DdeI CTNAG 1 cut(s) 75
Eco147I AGGCCT 1 cut(s) 97
EcoRII CCWGG 1 cut(s) 182
FaiI YATR 2 cut(s) 81, 194
HaeIII GGCC 2 cut(s) 85, 97
HapII CCGG 1 cut(s) 86
HinfI GANTC 3 cut(s) 89, 142, 179
HpaII CCGG 1 cut(s) 86
Hpy166II GTNNAC 2 cut(s) 55, 72
Hpy8I GTNNAC 2 cut(s) 55, 72
HpyAV CCTTC 2 cut(s) 108, 122
HpyCH4IV ACGT 1 cut(s) 57
HpyF3I CTNAG 1 cut(s) 75
HpySE526I ACGT 1 cut(s) 57
LpnPI CCDG 4 cut(s) 99, 160, 169, 196
MaeII ACGT 1 cut(s) 57
MbiI CCGCTC 1 cut(s) 108
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 1 cut(s) 105
MnlI CCTC 1 cut(s) 87
MspI CCGG 1 cut(s) 86
MspR9I CCNGG 1 cut(s) 184
MvaI CCWGG 1 cut(s) 184
PceI AGGCCT 1 cut(s) 97
PcsI WCGNNNNNNNCGW 1 cut(s) 98
PfeI GAWTC 2 cut(s) 142, 179
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
Psp6I CCWGG 1 cut(s) 182
PspGI CCWGG 1 cut(s) 182
RsaI GTAC 1 cut(s) 73
RsaNI GTAC 1 cut(s) 72
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 1 cut(s) 184
SetI ASST 4 cut(s) 10, 60, 64, 154
SgeI CNNG 6 cut(s) 21, 98, 105, 159, 195, 196
SseBI AGGCCT 1 cut(s) 97
SsiI CCGC 1 cut(s) 108
StuI AGGCCT 1 cut(s) 97
StyD4I CCNGG 1 cut(s) 182
TaiI ACGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 92, 101
TatI WGTACW 1 cut(s) 71
TfiI GAWTC 2 cut(s) 142, 179
TspDTI ATGAA 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.