Rh4CG115600
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
21868362 .. 21874990
6629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG115600.1

Sequence Viewer

Length: 453 bp
ATGTGGGCATGGAAGAAGTTTGAAGCTGGTGAACTAGAAGAACTAATGGTAGTATGTGGTATAGATGAGAAAGATAAAGAGGCAGCAGTGAGAATGGTAAAAGTAGCTATATGGTGTGTTCAGTATAGCTCTGAGTTGAGGCCTTTGATGAGTGTAGTGGTGAAAATGCTGGAAGGAGCACTTGAAATTCCTAAGCCTTCAATTAACCCATTTCAGTACTTGATGCCAGGTACTCCAATCGTGGCTGCATTTCCCGCATATAGCACTAGTGCATTCGACACTGATTCCTCTCAAAAGATAACCGGACATAGCTTCTTGCGTGGTACTCCTATCATGAGGAGATACGAAATTGAAATAGCATCTAATTCTGTGATAGAAGTTCAAACCCACAGCAACATTAGCTGGCAGTTAGATTTTAAACTTATTCACAAGTTGGAGGAGTTTGAAAACTGA

Protein Analysis

150

Amino Acids

17.09

Weight (kDa)

5.23

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 255
AcsI RAATTY 1 cut(s) 186
AfaI GTAC 3 cut(s) 218, 232, 325
AgsI TTSAA 6 cut(s) 23, 185, 201, 353, 383, 446
AhlI ACTAGT 1 cut(s) 266
AjnI CCWGG 1 cut(s) 226
AluBI AGCT 5 cut(s) 26, 107, 129, 312, 402
AluI AGCT 5 cut(s) 26, 107, 129, 312, 402
Alw21I GWGCWC 1 cut(s) 181
AoxI GGCC 1 cut(s) 140
ApeKI GCWGC 2 cut(s) 83, 245
ApoI RAATTY 1 cut(s) 186
AsuHPI GGTGA 2 cut(s) 41, 172
Bbv12I GWGCWC 1 cut(s) 181
BbvI GCAGC 2 cut(s) 95, 232
BciT130I CCWGG 1 cut(s) 228
BcuI ACTAGT 1 cut(s) 266
BfaI CTAG 2 cut(s) 35, 267
BisI GCNGC 2 cut(s) 84, 246
BlsI GCNGC 2 cut(s) 85, 247
BmcAI AGTACT 1 cut(s) 218
Bme1390I CCNGG 1 cut(s) 228
BmrFI CCNGG 1 cut(s) 228
BmsI GCATC 2 cut(s) 213, 368
Bpu10I CCTNAGC 1 cut(s) 192
BsaWI WCCGGW 1 cut(s) 302
BseBI CCWGG 1 cut(s) 228
BseMII CTCAG 1 cut(s) 123
BseRI GAGGAG 2 cut(s) 352, 452
BseXI GCAGC 2 cut(s) 95, 232
BshFI GGCC 1 cut(s) 142
BsiHKAI GWGCWC 1 cut(s) 181
BsiSI CCGG 1 cut(s) 303
BsmI GAATGC 1 cut(s) 272
BsnI GGCC 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 181
BspACI CCGC 1 cut(s) 255
BspANI GGCC 1 cut(s) 142
BspCNI CTCAG 1 cut(s) 124
BspHI TCATGA 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 228
BstC8I GCNNGC 1 cut(s) 404
BstDEI CTNAG 2 cut(s) 132, 192
BstMWI GCNNNNNNNGC 2 cut(s) 254, 399
BstNI CCWGG 1 cut(s) 228
BstSCI CCNGG 1 cut(s) 226
BstV1I GCAGC 2 cut(s) 95, 232
BsuRI GGCC 1 cut(s) 142
BtsI GCAGTG 1 cut(s) 93
BtsIMutI CAGTG 2 cut(s) 93, 279
Cac8I GCNNGC 1 cut(s) 404
CciI TCATGA 1 cut(s) 333
Csp6I GTAC 3 cut(s) 217, 231, 324
CviAII CATG 2 cut(s) 9, 334
CviJI RGCY 8 cut(s) 26, 107, 129, 142, 196, 245, 312, 402
CviKI_1 RGCY 8 cut(s) 26, 107, 129, 142, 196, 245, 312, 402
CviQI GTAC 3 cut(s) 217, 231, 324
DdeI CTNAG 2 cut(s) 132, 192
DraI TTTAAA 1 cut(s) 418
Eco147I AGGCCT 1 cut(s) 142
EcoRII CCWGG 1 cut(s) 226
FaeI CATG 2 cut(s) 12, 337
FalI AAGNNNNNCTT 2 cut(s) 165, 197
FatI CATG 2 cut(s) 8, 333
FauI CCCGC 1 cut(s) 262
Fnu4HI GCNGC 2 cut(s) 84, 246
Fsp4HI GCNGC 2 cut(s) 84, 246
FspBI CTAG 2 cut(s) 35, 267
GluI GCNGC 2 cut(s) 84, 246
HaeIII GGCC 1 cut(s) 142
HapII CCGG 1 cut(s) 303
Hin1II CATG 2 cut(s) 12, 337
HinfI GANTC 1 cut(s) 284
HpaII CCGG 1 cut(s) 303
HphI GGTGA 2 cut(s) 41, 172
Hpy166II GTNNAC 1 cut(s) 32
Hpy188I TCNGA 1 cut(s) 133
Hpy188III TCNNGA 1 cut(s) 334
Hpy8I GTNNAC 1 cut(s) 32
HpyAV CCTTC 2 cut(s) 167, 207
HpyCH4V TGCA 2 cut(s) 248, 272
HpyF10VI GCNNNNNNNGC 2 cut(s) 254, 399
HpyF3I CTNAG 2 cut(s) 132, 192
Hsp92II CATG 2 cut(s) 12, 337
LmnI GCTCC 1 cut(s) 176
LpnPI CCDG 6 cut(s) 12, 155, 213, 240, 316, 388
Lsp1109I GCAGC 2 cut(s) 95, 232
LweI GCATC 2 cut(s) 213, 368
MaeI CTAG 2 cut(s) 35, 267
MboII GAAGA 2 cut(s) 25, 50
MhlI GDGCHC 1 cut(s) 181
MluCI AATT 4 cut(s) 186, 201, 348, 364
MmeI TCCRAC 1 cut(s) 414
MnlI CCTC 5 cut(s) 73, 132, 298, 330, 430
MseI TTAA 2 cut(s) 204, 417
MspI CCGG 1 cut(s) 303
MspR9I CCNGG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 272
MvaI CCWGG 1 cut(s) 228
MwoI GCNNNNNNNGC 2 cut(s) 254, 399
NlaIII CATG 2 cut(s) 12, 337
PagI TCATGA 1 cut(s) 333
PceI AGGCCT 1 cut(s) 142
PctI GAATGC 1 cut(s) 272
PfeI GAWTC 1 cut(s) 284
PkrI GCNGC 2 cut(s) 85, 247
Psp6I CCWGG 1 cut(s) 226
PspGI CCWGG 1 cut(s) 226
RsaI GTAC 3 cut(s) 218, 232, 325
RsaNI GTAC 3 cut(s) 217, 231, 324
SaqAI TTAA 2 cut(s) 204, 417
SatI GCNGC 2 cut(s) 84, 246
ScaI AGTACT 1 cut(s) 218
ScrFI CCNGG 1 cut(s) 228
SduI GDGCHC 1 cut(s) 181
SetI ASST 6 cut(s) 28, 109, 131, 232, 314, 404
SfaNI GCATC 2 cut(s) 213, 368
SpeI ACTAGT 1 cut(s) 266
Sse9I AATT 4 cut(s) 186, 201, 348, 364
SseBI AGGCCT 1 cut(s) 142
SsiI CCGC 1 cut(s) 255
SspMI CTAG 2 cut(s) 35, 267
StuI AGGCCT 1 cut(s) 142
StyD4I CCNGG 1 cut(s) 226
TaqI TCGA 1 cut(s) 276
TasI AATT 4 cut(s) 186, 201, 348, 364
TatI WGTACW 1 cut(s) 216
TfiI GAWTC 1 cut(s) 284
Tru1I TTAA 2 cut(s) 204, 417
Tru9I TTAA 2 cut(s) 204, 417
TscAI CASTG 2 cut(s) 93, 286
TseI GCWGC 2 cut(s) 83, 245
TspRI CASTG 2 cut(s) 93, 286
XapI RAATTY 1 cut(s) 186
XspI CTAG 2 cut(s) 35, 267
ZrmI AGTACT 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.