MD13G1267400.v1.1

Calmodulin binding protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0007252
Physical Location & Seq
Forward (+)
35033348 .. 35041227
7880 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1267400.v1.1.491

Sequence Viewer

Length: 1899 bp
ATGAGGCAGACTAGGCTTATGGAGAGGACCAACTCTATGAGAGAGAAGAGGCAAATGGAAGGGGGAGAGGAGGAGCAACCCGAGCGAAAACGACCGGCTCTCGCTAGTGTAATTATAGAAGCTCTCAAGGTGGACAGTCTGCAGAAGCTATGCTCGTCATTGGAACCTATTCTTCGCAGAGTTGTAAGCGAAGAAGTGGAGCGTGCTTTGGCTAAGTTAGGCCCTACGAGAGTTAATGGAAGGTCTTCTCCAAAACGAATTGAAGGTCCAAATGGGCAAAACTTGCAACTAGAGTTTAAGTCCAATTTGGCTCTTCCGATATTCACAGGAGGTAAAGTTGAAGGCGAGCAGGGTGCTGCAATTCATGTTGTTTTAGTTGATGCAAACACTGGCCGAGTTGTGACTTCTGGGGCTGAATCCTCTGTAAAACTAGATATTGTTGTGCTTGAAGGTGATTTCAACAATGAAGATGATGAAGGCTGGACTCAAGAAGAATTTGATAGCCATGTGGTGAAAGAGCGTGAAGGAAAGAGACCTCTATTGACTGGGGACCTGCAAGTGACCCTCAAAGAAGGGGTAGGAACTCTAGGGGATCTGACCTTCACAGACAACTCAAGTTGGATACGAAGCAGGAAGTTCAGACTTGGATTGAAAGTAGCTTTGGGGTTTTGTGAGGGCATGCGCATACGAGAAGCTAAAACAGAAGCTTTTACTGTTAAAGATCACAGAGGGGAATTGTACAAGAAACACTACCCACCAGCATTAAATGATGAAGTATGGAGATTGGAGAAGATTGGTAAGGATGGGGCATTCCATAAGAGGTTAAGCAAAGCAGGAATATTCACAGTTGAAGAGTTTCTTCAGCTTGTGGTCCGAGATTCTCAAAAATTACGGAATATCCTTGGAAGCGGAATGTCAAATAAGATGTGGGATGCTCTTTTAGAACATGCAAAGACTTGTGTCTTGAGCGGGAAGCTTTATGTTTATTATCCTGAAGATACAAGAAATGTTGGTGTTGTTTTTAACAACATCTATCAGCTGAGTGGCCTCATCACCGGGGAGCAGTTTCACTCTGCTGATGATCTTTCTGACAGCCAGAAGGTCTATGTAGATGGGCTGGTGAAGAAAGCATATGACAACTGGGAGCAAGTTATTCAGTATGATGGCAAGTCACTTCTAAATTTCAAACAGATTAAGAGGTCGGCTGCACCCCGAACTGAAATTCAAATGGGCCCAATCAGTTACTCTGAAGCTTCAGATCAACTGCAACTACATCGCCTGCCAAATTCAGTTCACTCAGAGCAGCCTCCATTGGATCCGCTACCAATCGGAGGTTATAATGACGGTCTATCAACAAGATACTTGACCCAGCCACTCGTAAATTCCAATTCTCATACCCAGTTTGATGGCGCCGGATTTACACTGGATGACCAATTGATCAGCAATTCTCATCAGGTACAAAGCACAAGAAATGACCCCAATACTGTTGGTTTGGCTCTTGGTCCTCCACAATCATCCACATCAGGATTTCAGACTATCAATTCTGCTCAGACATCCACTCTTAATCCTATAGATGACTGGACAACCAACCGAGATTTTATTTCAGAGGAAGAGATTCGTATTAGAAGTCATGAGATGCTCGAAAATGAGGATATGCAGCACTTGCTCAGAATCTTCAGTATGGGAGGAGGCCATGGCTCAATTGATGTGCCCGATGATGGGTTTTCATTCCCCTCATATATGCCATCACCAATGCCCAACTATGAGGAAGATCGCACCCGTCCTGGAAAAGCTGTTGTGGGGTGGCTCAAAATTAAGGCAGCAATGAGATGGGGTTTTTTTGTGAGGAAGAAAGCTGCTGAGAGAAGGGCACAGATTGTGGAGATAGAGGATGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Calmodulin_bind

Protein Analysis

633

Amino Acids

70.95

Weight (kDa)

5.82

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Calmodulin_bind PF07887 95 - 242 6.1e-64 Calmodulin binding protein-like N-terminal domain
Calmod_bind_M PF20451 254 - 320 6.7e-33 Calmodulin binding protein central domain
Calmod_bind_C PF20452 325 - 387 2.9e-24 Calmodulin binding protein C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1338
Acc16I TGCGCA 1 cut(s) 683
Acc36I ACCTGC 1 cut(s) 561
AccB1I GGYRCC 1 cut(s) 1409
AccBSI CCGCTC 1 cut(s) 969
AciI CCGC 3 cut(s) 909, 969, 1319
AclWI GGATC 3 cut(s) 600, 1310, 1323
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 5 cut(s) 494, 1180, 1221, 1285, 1381
AcuI CTGAAG 5 cut(s) 845, 1014, 1239, 1269, 1660
AcyI GRCGYC 1 cut(s) 1410
AfaI GTAC 2 cut(s) 740, 1458
AfiI CCNNNNNNNGG 3 cut(s) 1331, 1718, 1719
AgsI TTSAA 8 cut(s) 263, 341, 449, 460, 652, 851, 1186, 1226
AjnI CCWGG 1 cut(s) 1783
AjuI GAANNNNNNNTTGG 2 cut(s) 644, 676
Alw26I GTCTC 1 cut(s) 526
AlwI GGATC 3 cut(s) 600, 1310, 1323
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 5 cut(s) 220, 391, 1045, 1231, 1690
ApaI GGGCCC 1 cut(s) 1235
ApeKI GCWGC 6 cut(s) 356, 1205, 1303, 1657, 1820, 1856
ApoI RAATTY 5 cut(s) 494, 1180, 1221, 1285, 1381
ArsI GACNNNNNNTTYG 2 cut(s) 250, 282
Asp700I GAANNNNTTC 4 cut(s) 168, 244, 855, 1614
AspLEI GCGC 2 cut(s) 684, 1412
AspS9I GGNCC 8 cut(s) 27, 221, 266, 550, 871, 1231, 1232, 1502
AsuC2I CCSGG 1 cut(s) 1057
AsuHPI GGTGA 5 cut(s) 464, 523, 1045, 1132, 1740
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 5 cut(s) 27, 266, 550, 871, 1502
BaeGI GKGCMC 3 cut(s) 1235, 1713, 1873
BamHI GGATCC 1 cut(s) 1315
BanI GGYRCC 1 cut(s) 1409
BanII GRGCYC 1 cut(s) 1235
BbsI GAAGAC 1 cut(s) 237
BbvI GCAGC 6 cut(s) 343, 1192, 1315, 1669, 1832, 1843
BccI CCATC 7 cut(s) 797, 1106, 1157, 1400, 1712, 1753, 1824
BcgI CGANNNNNNTGC 4 cut(s) 335, 369, 1256, 1290
BciT130I CCWGG 1 cut(s) 1785
BciVI GTATCC 1 cut(s) 615
BclI TGATCA 1 cut(s) 1437
BcnI CCSGG 1 cut(s) 1057
BcoDI GTCTC 1 cut(s) 526
BfaI CTAG 5 cut(s) 12, 105, 290, 431, 587
BfmI CTRYAG 2 cut(s) 140, 1569
BfoI RGCGCY 1 cut(s) 1413
BfuAI ACCTGC 1 cut(s) 561
BfuI GTATCC 1 cut(s) 615
BisI GCNGC 6 cut(s) 357, 1206, 1304, 1658, 1821, 1857
BlsI GCNGC 6 cut(s) 358, 1207, 1305, 1659, 1822, 1858
Bme1390I CCNGG 2 cut(s) 1057, 1785
Bme18I GGWCC 5 cut(s) 27, 266, 550, 871, 1502
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 8 cut(s) 27, 221, 266, 550, 871, 1231, 1232, 1502
BmiI GGNNCC 5 cut(s) 165, 551, 1233, 1317, 1411
BmrFI CCNGG 2 cut(s) 1057, 1785
BmrI ACTGGG 3 cut(s) 555, 1150, 1393
BmsI GCATC 3 cut(s) 370, 922, 1626
BmuI ACTGGG 3 cut(s) 555, 1150, 1393
BoxI GACNNNNGTC 1 cut(s) 959
BpiI GAAGAC 1 cut(s) 237
BpuEI CTTGAG 4 cut(s) 110, 471, 598, 985
BpuMI CCSGG 1 cut(s) 1057
BsaHI GRCGYC 1 cut(s) 1410
BsaI GGTCTC 1 cut(s) 526
BsaJI CCNNGG 3 cut(s) 901, 1056, 1693
BsaXI ACNNNNNCTCC 2 cut(s) 321, 351
Bsc4I CCNNNNNNNGG 3 cut(s) 1331, 1718, 1719
Bse118I RCCGGY 1 cut(s) 94
Bse1I ACTGG 6 cut(s) 394, 550, 1145, 1399, 1428, 1583
Bse3DI GCAATG 1 cut(s) 1830
BseBI CCWGG 1 cut(s) 1785
BseDI CCNNGG 3 cut(s) 901, 1056, 1693
BseGI GGATG 6 cut(s) 808, 937, 1432, 1514, 1553, 1897
BseLI CCNNNNNNNGG 3 cut(s) 1331, 1718, 1719
BseMI GCAATG 1 cut(s) 1830
BseMII CTCAG 5 cut(s) 1031, 1311, 1562, 1681, 1851
BseNI ACTGG 6 cut(s) 394, 550, 1145, 1399, 1428, 1583
BseRI GAGGAG 3 cut(s) 83, 86, 1701
BseSI GKGCMC 3 cut(s) 1235, 1713, 1873
BseXI GCAGC 6 cut(s) 343, 1192, 1315, 1669, 1832, 1843
BseYI CCCAGC 1 cut(s) 1368
BsgI GTGCAG 1 cut(s) 1191
Bsh1285I CGRYCG 1 cut(s) 95
BshFI GGCC 5 cut(s) 222, 393, 1047, 1233, 1692
BshNI GGYRCC 1 cut(s) 1409
BsiEI CGRYCG 1 cut(s) 95
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 3 cut(s) 95, 1056, 1413
BslFI GGGAC 1 cut(s) 563
BslI CCNNNNNNNGG 3 cut(s) 1331, 1718, 1719
BsmAI GTCTC 1 cut(s) 526
BsmFI GGGAC 1 cut(s) 563
BsmI GAATGC 1 cut(s) 809
BsnI GGCC 5 cut(s) 222, 393, 1047, 1233, 1692
Bso31I GGTCTC 1 cut(s) 526
BsoBI CYCGRG 1 cut(s) 80
Bsp120I GGGCCC 1 cut(s) 1231
Bsp1286I GDGCHC 3 cut(s) 1235, 1713, 1873
Bsp1407I TGTACA 1 cut(s) 738
Bsp143I GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
Bsp19I CCATGG 1 cut(s) 1693
BspACI CCGC 3 cut(s) 909, 969, 1319
BspANI GGCC 5 cut(s) 222, 393, 1047, 1233, 1692
BspCNI CTCAG 5 cut(s) 1032, 1310, 1561, 1680, 1852
BspHI TCATGA 1 cut(s) 1630
BspLI GGNNCC 5 cut(s) 165, 551, 1233, 1317, 1411
BspMAI CTGCAG 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 561
BspPI GGATC 3 cut(s) 600, 1310, 1323
BspQI GCTCTTC 1 cut(s) 318
BspT107I GGYRCC 1 cut(s) 1409
BspTNI GGTCTC 1 cut(s) 526
BsrBI CCGCTC 1 cut(s) 969
BsrDI GCAATG 1 cut(s) 1830
BsrFI RCCGGY 1 cut(s) 94
BsrGI TGTACA 1 cut(s) 738
BsrI ACTGG 6 cut(s) 394, 550, 1145, 1399, 1428, 1583
BssAI RCCGGY 1 cut(s) 94
BssECI CCNNGG 3 cut(s) 901, 1056, 1693
BssMI GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
BssNI GRCGYC 1 cut(s) 1410
BssT1I CCWWGG 2 cut(s) 901, 1693
Bst2UI CCWGG 1 cut(s) 1785
Bst4CI ACNGT 5 cut(s) 137, 715, 847, 1346, 1486
Bst6I CTCTTC 4 cut(s) 41, 318, 846, 1605
BstACI GRCGYC 1 cut(s) 1410
BstAPI GCANNNNNTGC 2 cut(s) 283, 1663
BstAUI TGTACA 1 cut(s) 738
BstC8I GCNNGC 4 cut(s) 204, 347, 680, 1280
BstDEI CTNAG 6 cut(s) 213, 1040, 1297, 1548, 1667, 1860
BstDSI CCRYGG 1 cut(s) 1693
BstF5I GGATG 6 cut(s) 808, 937, 1432, 1514, 1553, 1897
BstH2I RGCGCY 1 cut(s) 1413
BstHHI GCGC 2 cut(s) 684, 1412
BstKTI GATC 7 cut(s) 595, 724, 1084, 1261, 1318, 1440, 1774
BstMAI GTCTC 1 cut(s) 526
BstMBI GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
BstMCI CGRYCG 1 cut(s) 95
BstMWI GCNNNNNNNGC 4 cut(s) 13, 82, 283, 1663
BstNI CCWGG 1 cut(s) 1785
BstNSI RCATGY 2 cut(s) 682, 950
BstPAI GACNNNNGTC 1 cut(s) 959
BstSCI CCNGG 2 cut(s) 1055, 1783
BstSFI CTRYAG 2 cut(s) 140, 1569
BstSLI GKGCMC 3 cut(s) 1235, 1713, 1873
BstV1I GCAGC 6 cut(s) 343, 1192, 1315, 1669, 1832, 1843
BstV2I GAAGAC 1 cut(s) 237
BstX2I RGATCY 2 cut(s) 592, 1315
BstXI CCANNNNNNTGG 1 cut(s) 1406
BstYI RGATCY 2 cut(s) 592, 1315
BsuI GTATCC 1 cut(s) 615
BsuRI GGCC 5 cut(s) 222, 393, 1047, 1233, 1692
BtgI CCRYGG 1 cut(s) 1693
BtgZI GCGATG 1 cut(s) 1259
BtsCI GGATG 6 cut(s) 808, 937, 1432, 1514, 1553, 1897
BtsIMutI CAGTG 2 cut(s) 387, 1421
BveI ACCTGC 1 cut(s) 561
Cac8I GCNNGC 4 cut(s) 204, 347, 680, 1280
CciI TCATGA 1 cut(s) 1630
CfoI GCGC 2 cut(s) 684, 1412
Cfr10I RCCGGY 1 cut(s) 94
Cfr13I GGNCC 8 cut(s) 27, 221, 266, 550, 871, 1231, 1232, 1502
Csp6I GTAC 2 cut(s) 739, 1457
CviAII CATG 6 cut(s) 365, 506, 679, 947, 1631, 1694
CviQI GTAC 2 cut(s) 739, 1457
DdeI CTNAG 6 cut(s) 213, 1040, 1297, 1548, 1667, 1860
DinI GGCGCC 1 cut(s) 1411
DpnI GATC 7 cut(s) 594, 723, 1083, 1260, 1317, 1439, 1773
DpnII GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
EaeI YGGCCR 1 cut(s) 391
Eam1104I CTCTTC 4 cut(s) 41, 318, 846, 1605
EarI CTCTTC 4 cut(s) 41, 318, 846, 1605
Eco130I CCWWGG 2 cut(s) 901, 1693
Eco24I GRGCYC 1 cut(s) 1235
Eco31I GGTCTC 1 cut(s) 526
Eco47I GGWCC 5 cut(s) 27, 266, 550, 871, 1502
Eco57I CTGAAG 5 cut(s) 845, 1014, 1239, 1269, 1660
Eco88I CYCGRG 1 cut(s) 80
EcoO109I RGGNCCY 2 cut(s) 221, 550
EcoRII CCWGG 1 cut(s) 1783
EcoT14I CCWWGG 2 cut(s) 901, 1693
EcoT38I GRGCYC 1 cut(s) 1235
EgeI GGCGCC 1 cut(s) 1411
EheI GGCGCC 1 cut(s) 1411
ErhI CCWWGG 2 cut(s) 901, 1693
FaeI CATG 6 cut(s) 368, 509, 682, 950, 1634, 1697
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FaqI GGGAC 1 cut(s) 563
FatI CATG 6 cut(s) 364, 505, 678, 946, 1630, 1693
FauI CCCGC 1 cut(s) 962
FauNDI CATATG 1 cut(s) 1132
FbaI TGATCA 1 cut(s) 1437
Fnu4HI GCNGC 6 cut(s) 357, 1206, 1304, 1658, 1821, 1857
FokI GGATG 5 cut(s) 815, 944, 1439, 1501, 1540
FriOI GRGCYC 1 cut(s) 1235
Fsp4HI GCNGC 6 cut(s) 357, 1206, 1304, 1658, 1821, 1857
FspAI RTGCGCAY 1 cut(s) 683
FspBI CTAG 5 cut(s) 12, 105, 290, 431, 587
FspI TGCGCA 1 cut(s) 683
GlaI GCGC 2 cut(s) 683, 1411
GluI GCNGC 6 cut(s) 357, 1206, 1304, 1658, 1821, 1857
GsaI CCCAGC 1 cut(s) 1372
HaeII RGCGCY 1 cut(s) 1413
HaeIII GGCC 5 cut(s) 222, 393, 1047, 1233, 1692
HapII CCGG 3 cut(s) 95, 1056, 1413
HhaI GCGC 2 cut(s) 684, 1412
Hin1I GRCGYC 1 cut(s) 1410
Hin1II CATG 6 cut(s) 368, 509, 682, 950, 1634, 1697
Hin6I GCGC 2 cut(s) 682, 1410
HinP1I GCGC 2 cut(s) 682, 1410
HindIII AAGCTT 3 cut(s) 705, 974, 1251
HinfI GANTC 5 cut(s) 416, 484, 878, 1615, 1671
HpaII CCGG 3 cut(s) 95, 1056, 1413
HphI GGTGA 5 cut(s) 464, 523, 1045, 1132, 1740
Hpy166II GTNNAC 2 cut(s) 133, 1294
Hpy188III TCNNGA 5 cut(s) 488, 964, 992, 1524, 1631
Hpy8I GTNNAC 2 cut(s) 133, 1294
HpyCH4III ACNGT 5 cut(s) 137, 715, 847, 1346, 1486
HpyCH4V TGCA 9 cut(s) 142, 286, 359, 383, 556, 950, 1208, 1267, 1657
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 82, 283, 1663
HpyF3I CTNAG 6 cut(s) 213, 1040, 1297, 1548, 1667, 1860
Hsp92I GRCGYC 1 cut(s) 1410
Hsp92II CATG 6 cut(s) 368, 509, 682, 950, 1634, 1697
HspAI GCGC 2 cut(s) 682, 1410
KasI GGCGCC 1 cut(s) 1409
Ksp22I TGATCA 1 cut(s) 1437
Kzo9I GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 4 cut(s) 73, 199, 1060, 1144
Lsp1109I GCAGC 6 cut(s) 343, 1192, 1315, 1669, 1832, 1843
LweI GCATC 3 cut(s) 370, 922, 1626
MaeI CTAG 5 cut(s) 12, 105, 290, 431, 587
MaeIII GTNAC 4 cut(s) 400, 559, 1170, 1241
MalI GATC 7 cut(s) 594, 723, 1083, 1260, 1317, 1439, 1773
MbiI CCGCTC 1 cut(s) 969
MboI GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
MfeI CAATTG 2 cut(s) 1433, 1701
MflI RGATCY 2 cut(s) 592, 1315
MhlI GDGCHC 3 cut(s) 1235, 1713, 1873
Mly113I GGCGCC 1 cut(s) 1410
MlyI GAGTC 1 cut(s) 478
MmeI TCCRAC 1 cut(s) 599
MroXI GAANNNNTTC 4 cut(s) 168, 244, 855, 1614
MseI TTAA 9 cut(s) 234, 297, 717, 764, 824, 1023, 1194, 1563, 1815
MspA1I CMGCKG 1 cut(s) 1039
MspI CCGG 3 cut(s) 95, 1056, 1413
MspR9I CCNGG 2 cut(s) 1057, 1785
MunI CAATTG 2 cut(s) 1433, 1701
Mva1269I GAATGC 1 cut(s) 809
MvaI CCWGG 1 cut(s) 1785
MwoI GCNNNNNNNGC 4 cut(s) 13, 82, 283, 1663
NarI GGCGCC 1 cut(s) 1410
NciI CCSGG 1 cut(s) 1057
NcoI CCATGG 1 cut(s) 1693
NdeI CATATG 1 cut(s) 1132
NdeII GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
NlaIII CATG 6 cut(s) 368, 509, 682, 950, 1634, 1697
NlaIV GGNNCC 5 cut(s) 165, 551, 1233, 1317, 1411
NmeAIII GCCGAG 1 cut(s) 419
NmuCI GTSAC 3 cut(s) 400, 559, 1170
NsbI TGCGCA 1 cut(s) 683
NspI RCATGY 2 cut(s) 682, 950
PaeI GCATGC 1 cut(s) 682
PagI TCATGA 1 cut(s) 1630
PciSI GCTCTTC 1 cut(s) 318
PctI GAATGC 1 cut(s) 809
PdmI GAANNNNTTC 4 cut(s) 168, 244, 855, 1614
PfeI GAWTC 4 cut(s) 416, 878, 1615, 1671
PfoI TCCNGGA 1 cut(s) 1783
PkrI GCNGC 6 cut(s) 358, 1207, 1305, 1659, 1822, 1858
PleI GAGTC 1 cut(s) 478
PluTI GGCGCC 1 cut(s) 1413
PpsI GAGTC 1 cut(s) 478
PpuMI RGGWCCY 1 cut(s) 550
PshAI GACNNNNGTC 1 cut(s) 959
PsiI TTATAA 1 cut(s) 1338
Psp5II RGGWCCY 1 cut(s) 550
Psp6I CCWGG 1 cut(s) 1783
PspFI CCCAGC 1 cut(s) 1368
PspGI CCWGG 1 cut(s) 1783
PspN4I GGNNCC 5 cut(s) 165, 551, 1233, 1317, 1411
PspOMI GGGCCC 1 cut(s) 1231
PspPI GGNCC 8 cut(s) 27, 221, 266, 550, 871, 1231, 1232, 1502
PspPPI RGGWCCY 1 cut(s) 550
PstI CTGCAG 1 cut(s) 144
PsuI RGATCY 2 cut(s) 592, 1315
PvuII CAGCTG 1 cut(s) 1039
RsaI GTAC 2 cut(s) 740, 1458
RsaNI GTAC 2 cut(s) 739, 1457
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 9 cut(s) 234, 297, 717, 764, 824, 1023, 1194, 1563, 1815
SatI GCNGC 6 cut(s) 357, 1206, 1304, 1658, 1821, 1857
Sau3AI GATC 7 cut(s) 592, 721, 1081, 1258, 1315, 1437, 1771
Sau96I GGNCC 8 cut(s) 27, 221, 266, 550, 871, 1231, 1232, 1502
SchI GAGTC 1 cut(s) 478
ScrFI CCNGG 2 cut(s) 1057, 1785
SduI GDGCHC 3 cut(s) 1235, 1713, 1873
SfaNI GCATC 3 cut(s) 370, 922, 1626
SfcI CTRYAG 2 cut(s) 140, 1569
SfoI GGCGCC 1 cut(s) 1411
SinI GGWCC 5 cut(s) 27, 266, 550, 871, 1502
SmlI CTYRAG 4 cut(s) 125, 486, 613, 964
SmoI CTYRAG 4 cut(s) 125, 486, 613, 964
SphI GCATGC 1 cut(s) 682
SsiI CCGC 3 cut(s) 909, 969, 1319
SspDI GGCGCC 1 cut(s) 1409
SspI AATATT 1 cut(s) 840
SspMI CTAG 5 cut(s) 12, 105, 290, 431, 587
StyD4I CCNGG 2 cut(s) 1055, 1783
StyI CCWWGG 2 cut(s) 901, 1693
TaaI ACNGT 5 cut(s) 137, 715, 847, 1346, 1486
TaqI TCGA 1 cut(s) 1641
TatI WGTACW 1 cut(s) 738
TfiI GAWTC 4 cut(s) 416, 878, 1615, 1671
Tru1I TTAA 9 cut(s) 234, 297, 717, 764, 824, 1023, 1194, 1563, 1815
Tru9I TTAA 9 cut(s) 234, 297, 717, 764, 824, 1023, 1194, 1563, 1815
TscAI CASTG 2 cut(s) 394, 1428
TseFI GTSAC 3 cut(s) 400, 559, 1170
TseI GCWGC 6 cut(s) 356, 1205, 1303, 1657, 1820, 1856
Tsp45I GTSAC 3 cut(s) 400, 559, 1170
TspDTI ATGAA 5 cut(s) 353, 480, 489, 786, 1716
TspGWI ACGGA 1 cut(s) 907
TspRI CASTG 2 cut(s) 394, 1428
VpaK11BI GGWCC 5 cut(s) 27, 266, 550, 871, 1502
XapI RAATTY 5 cut(s) 494, 1180, 1221, 1285, 1381
XceI RCATGY 2 cut(s) 682, 950
XmnI GAANNNNTTC 4 cut(s) 168, 244, 855, 1614
XspI CTAG 5 cut(s) 12, 105, 290, 431, 587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.