Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007807

Physical Location & Seq

Genomic Coordinates Reverse (-)

15596363 .. 15605381

Gene Structure 9019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1101200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGGTTCTTGCAAGTCCCCTCACGTTGTTCTTCTGCTACATGTCTTGCTTTGCTCTGTCTATCGTTGCTTTGCCATTGGAGTCGATGCAAACCAGACAGCAAACCTGCTTATCGATGCTTCTCAAGCATCCGCACGCCCAATATCTGACACGCTGTTTGGAATTTTCTTTGAGGAGATTAACCATGCTGGTGCTGGCGGGGTGTGGGCTGAGCTTGTAAGCAACAGAGGTTTTGAAGCTGGGGGCCCTAACACTCCTTCTAACATTGATCCTTGGGCGATAATTGGCAATGAGTCCTCTTTGATTGTGTCAACGGACCGTTCATCATGCTTTGACCGCAATAAGGTTGCACTCCGAATGGAGGTGCTATGTGACACCCAAGGCGCCAATAGCTGCCCTGCTGGGGGTGTTGGAATTTATAACCCTGGGTTCTGGGGCATGAATATAGAAAAAGGGAAGACATACAATGCTGTTCTTTATGTTCGTTCATCTGGATCAATCAATGTATCCGTATCACTGACAGGCTCAGATGGGTTGCAGAAACTTGCTGCTGCGAACATTATTGCTTCTGGTTCTGAAGTTTCAAACTGGACAAAATTCGAGGTTCAGTTGAAAGCCCAAGGAACAAATCCTAACTCAAGACTGCAATTGACAACAACCAGTAAAGGGGTGATATGGTTTGATCAAGTGTCAGCCATTCCCTTGGATACATATAAGGGACATGGATTTCGGAAGGACCTTGTCCAAATGTTGGCTGATTTAAAACCTCGGTTTTTCAGATTTCCAGGTGGCTGTTTCGTTGAAGGTGAATGGTTACGCAATGCATTTCGTTGGAAAGAAACAATTGGACCCTGGGAAGAGAGACCTGGACACTTTGGTGATGTTTGGATGTACTGGACTGACGATGGACTTGGTTATTTTGAGTTTCTCCAACTATCAGAGGACCTTGGCTCATTGCCAATATGGGTGTTCAATAACGGAATCAGTCACAATGATCAAGTTGATACTTCCAGTGTCTTACCATTTGTACAGGAAGCTCTCGATGGTATAGAATTTGCTAGAGGCAGTCCTAATTCCACATGGGGTTCTCTTCGTGCTGCAATGGGACACCCAGAACCCTTTGACTTGAGATATGTTGCTATAGGGAATGAGGATTGTGGAAAAAAGAACTACCGAGGAAATTACCTTAAGTTCTATAGTGCTATAAGAAACGCCTATCCTGACATCAAAATGATTTCAAACTGCGACGGTTCTTCTCGTCAGTTGGATCATCCAGCCGATATGTATGATTTTCATATCTATACATCTGCCAGCAACTTGTTTTCTATGGCCAATCATTTTGATCACACGTCACGTAACGGCCCCAAGGCTTTTGTGAGCGAGTATGCCGTGACTGGAAAAGATGCTGGGAGAGGAAGTCTTCTAGCAGCATTAGCTGAAGCTGGATTTCTTATTGGACTGGAGAAAAACAGTGATATTGTTGAGATGGCAAGCTATGCACCACTCTTTGTCAATACCCATGACAGGCGGTGGAATCCGGATGCAATTGTCTTCGACTCCTCACAGCTCTACGGGACTCCTAGCTACTGGGTGCAATGTCTGTTCAACGAATCTAGTGGAGCAACTCTTTACAACTCAACACTCCAAACGAATTCTTCTACTTCACTTCTTGCATCTGCAATTTCGTGGCAAAATTCAGAAAACGAGAATACTTACCTGAGAATAAAGGTTGTGAATTTGGGAACCTACACAGTGAATCTGAAGGTTTTTGTGGATGGGTTGGAGCCAAATTCCGTTAGTCTGTCTGGGTCAACAAAAACTGTGCTTACATCAAACAACCAGATGGACGAGAATTCGTTTAACGAGCCAAAGAAGGTGATACCCAAACGGAGCCTGCTAGAGTCCGCGGGTGAGGAAATGGAGGTTGTAATCTCTCCGCGTTCATTCACCTCCATTGATTTGTTAATGGAATCGAGCGATGTCATCAGGACTACTGGAGCTGATTCTGTCTCTGTATCTTCTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009505 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Alpha-L-AF_C

Protein Analysis

676

Amino Acids

74.01

Weight (kDa)

5.15

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ASD1_dom	PF22848	251 - 452	2.2e-56	Alpha-L-arabinofuranosidase 1 domain
Alpha-L-AF_C	PF06964	470 - 648	1.5e-23	Alpha-L-arabinofuranosidase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10740 AT3G10740 AT3G10740 AT3G10740
fragaria_vesca	FvH4_1g29140 FvH4_1g29140
malus_domestica	MD12G1112100.v1.1 MD14G1101200.v1.1
prunus_persica	Prupe.7G021200_v2.0.a1 Prupe.7G021200_v2.0.a1 Prupe.7G021200_v2.0.a1
pyrus_communis	pycom12g09150 pycom14g08790
rosa_chinensis	RchiOBHm_Chr3g0494401
rosa_laevigata	RLG00000022674
rosa_multiflora	Rmu_sc0001481.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391120
rosa_rugosa	Rorug03G0265100 Rorug03G0265200
rosa_samantha	Rh3AG315400 Rh3BG350600 Rh3CG347300 Rh3DG349900
rosa_wichuraiana	Rw3G027540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	420
Acc36I	ACCTGC	1 cut(s)	114
AccB1I	GGYRCC	1 cut(s)	383
AccB7I	CCANNNNNTGG	1 cut(s)	751
AccII	CGCG	2 cut(s)	1907, 1939
AccIII	TCCGGA	1 cut(s)	1537
AciI	CCGC	7 cut(s)	132, 198, 337, 1528, 1905, 1907, 1937
AclWI	GGATC	3 cut(s)	263, 502, 1275
AcoI	YGGCCR	1 cut(s)	1329
AcsI	RAATTY	9 cut(s)	162, 414, 596, 1052, 1651, 1693, 1735, 1789, 1852
AcuI	CTGAAG	3 cut(s)	597, 1458, 1781
AcyI	GRCGYC	1 cut(s)	384
AfaI	GTAC	2 cut(s)	893, 1029
AfiI	CCNNNNNNNGG	7 cut(s)	343, 361, 403, 404, 666, 751, 1524
AflII	CTTAAG	1 cut(s)	1187
AflIII	ACRYGT	2 cut(s)	40, 1347
AgsI	TTSAA	7 cut(s)	236, 585, 613, 803, 973, 1239, 1606
AjiI	CACGTC	1 cut(s)	1350
AjnI	CCWGG	4 cut(s)	424, 784, 851, 865
AleI	CACNNNNGTG	1 cut(s)	876
Alw26I	GTCTC	2 cut(s)	856, 2014
AlwI	GGATC	3 cut(s)	263, 502, 1275
Aor13HI	TCCGGA	1 cut(s)	1537
AoxI	GGCC	3 cut(s)	244, 1329, 1360
ApaI	GGGCCC	1 cut(s)	248
ApeKI	GCWGC	5 cut(s)	393, 548, 551, 1097, 1427
ApoI	RAATTY	9 cut(s)	162, 414, 596, 1052, 1651, 1693, 1735, 1789, 1852
ArsI	GACNNNNNNTTYG	4 cut(s)	140, 172, 711, 743
AspLEI	GCGC	1 cut(s)	386
AspS9I	GGNCC	7 cut(s)	244, 245, 316, 736, 848, 943, 1361
AsuHPI	GGTGA	6 cut(s)	682, 818, 890, 1888, 1922, 1939
AvaII	GGWCC	4 cut(s)	316, 736, 848, 943
BaeGI	GKGCMC	1 cut(s)	248
BalI	TGGCCA	1 cut(s)	1331
BanI	GGYRCC	1 cut(s)	383
BanII	GRGCYC	1 cut(s)	248
BbsI	GAAGAC	3 cut(s)	464, 1412, 1543
BbvI	GCAGC	5 cut(s)	380, 535, 538, 1084, 1439
BccI	CCATC	6 cut(s)	524, 899, 1037, 1480, 1769, 1837
BceAI	ACGGC	2 cut(s)	1373, 1375
BciT130I	CCWGG	4 cut(s)	426, 786, 853, 867
BciVI	GTATCC	2 cut(s)	517, 700
BclI	TGATCA	3 cut(s)	682, 994, 1342
BcoDI	GTCTC	2 cut(s)	856, 2014
BfaI	CTAG	5 cut(s)	1059, 1424, 1581, 1614, 1898
BfmI	CTRYAG	2 cut(s)	1140, 1195
BfoI	RGCGCY	1 cut(s)	387
BfrI	CTTAAG	1 cut(s)	1187
BfuAI	ACCTGC	1 cut(s)	114
BfuI	GTATCC	2 cut(s)	517, 700
BisI	GCNGC	5 cut(s)	394, 549, 552, 1098, 1428
BlpI	GCTNAGC	1 cut(s)	210
BlsI	GCNGC	5 cut(s)	395, 550, 553, 1099, 1429
Bme1390I	CCNGG	4 cut(s)	426, 786, 853, 867
Bme18I	GGWCC	4 cut(s)	316, 736, 848, 943
BmgBI	CACGTC	1 cut(s)	1350
BmgT120I	GGNCC	7 cut(s)	244, 245, 316, 736, 848, 943, 1361
BmiI	GGNNCC	8 cut(s)	245, 246, 385, 850, 1363, 1744, 1785, 1892
BmrFI	CCNGG	4 cut(s)	426, 786, 853, 867
BmrI	ACTGGG	1 cut(s)	1597
BmsI	GCATC	6 cut(s)	76, 106, 137, 1393, 1531, 1682
BmuI	ACTGGG	1 cut(s)	1597
BpiI	GAAGAC	3 cut(s)	464, 1412, 1543
BpmI	CTGGAG	2 cut(s)	1481, 2016
Bpu1102I	GCTNAGC	1 cut(s)	210
BpuEI	CTTGAG	3 cut(s)	108, 622, 1147
Bsa29I	ATCGAT	1 cut(s)	114
BsaAI	YACGTR	1 cut(s)	1355
BsaHI	GRCGYC	1 cut(s)	384
BsaI	GGTCTC	1 cut(s)	856
BsaWI	WCCGGW	1 cut(s)	1537
BsaXI	ACNNNNNCTCC	2 cut(s)	1402, 1432
Bsc4I	CCNNNNNNNGG	7 cut(s)	343, 361, 403, 404, 666, 751, 1524
Bse1I	ACTGG	8 cut(s)	593, 660, 899, 1011, 1399, 1464, 1592, 1999
Bse3DI	GCAATG	5 cut(s)	295, 826, 953, 1107, 1601
BseAI	TCCGGA	1 cut(s)	1537
BseBI	CCWGG	4 cut(s)	426, 786, 853, 867
BseCI	ATCGAT	1 cut(s)	114
BseGI	GGATG	5 cut(s)	128, 894, 1270, 1546, 1780
BseLI	CCNNNNNNNGG	7 cut(s)	343, 361, 403, 404, 666, 751, 1524
BseMI	GCAATG	5 cut(s)	295, 826, 953, 1107, 1601
BseMII	CTCAG	3 cut(s)	201, 540, 1709
BseNI	ACTGG	8 cut(s)	593, 660, 899, 1011, 1399, 1464, 1592, 1999
BseRI	GAGGAG	2 cut(s)	188, 1549
BseSI	GKGCMC	1 cut(s)	248
BseXI	GCAGC	5 cut(s)	380, 535, 538, 1084, 1439
BseYI	CCCAGC	3 cut(s)	239, 401, 1406
Bsh1236I	CGCG	2 cut(s)	1907, 1939
BshFI	GGCC	3 cut(s)	246, 1331, 1362
BshNI	GGYRCC	1 cut(s)	383
BshVI	ATCGAT	1 cut(s)	114
BsiSI	CCGG	1 cut(s)	1538
BslFI	GGGAC	3 cut(s)	732, 1119, 1588
BslI	CCNNNNNNNGG	7 cut(s)	343, 361, 403, 404, 666, 751, 1524
BsmAI	GTCTC	2 cut(s)	856, 2014
BsmFI	GGGAC	3 cut(s)	732, 1119, 1588
BsnI	GGCC	3 cut(s)	246, 1331, 1362
Bso31I	GGTCTC	1 cut(s)	856
Bsp120I	GGGCCC	1 cut(s)	244
Bsp1286I	GDGCHC	1 cut(s)	248
Bsp13I	TCCGGA	1 cut(s)	1537
Bsp1407I	TGTACA	1 cut(s)	1027
Bsp143I	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
Bsp1720I	GCTNAGC	1 cut(s)	210
BspACI	CCGC	7 cut(s)	132, 198, 337, 1528, 1905, 1907, 1937
BspANI	GGCC	3 cut(s)	246, 1331, 1362
BspCNI	CTCAG	3 cut(s)	202, 539, 1710
BspDI	ATCGAT	1 cut(s)	114
BspEI	TCCGGA	1 cut(s)	1537
BspFNI	CGCG	2 cut(s)	1907, 1939
BspLI	GGNNCC	8 cut(s)	245, 246, 385, 850, 1363, 1744, 1785, 1892
BspMI	ACCTGC	1 cut(s)	114
BspPI	GGATC	3 cut(s)	263, 502, 1275
BspT107I	GGYRCC	1 cut(s)	383
BspTI	CTTAAG	1 cut(s)	1187
BspTNI	GGTCTC	1 cut(s)	856
BsrDI	GCAATG	5 cut(s)	295, 826, 953, 1107, 1601
BsrGI	TGTACA	1 cut(s)	1027
BsrI	ACTGG	8 cut(s)	593, 660, 899, 1011, 1399, 1464, 1592, 1999
BssMI	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
BssNI	GRCGYC	1 cut(s)	384
BssT1I	CCWWGG	6 cut(s)	272, 379, 619, 702, 946, 1365
Bst2UI	CCWGG	4 cut(s)	426, 786, 853, 867
Bst4CI	ACNGT	5 cut(s)	320, 1250, 1472, 1753, 1822
Bst6I	CTCTTC	2 cut(s)	852, 1095
BstACI	GRCGYC	1 cut(s)	384
BstAFI	CTTAAG	1 cut(s)	1187
BstAPI	GCANNNNNTGC	1 cut(s)	1496
BstAUI	TGTACA	1 cut(s)	1027
BstBAI	YACGTR	1 cut(s)	1355
BstC8I	GCNNGC	5 cut(s)	136, 196, 1312, 1492, 1895
BstDEI	CTNAG	3 cut(s)	210, 526, 1718
BstDSI	CCRYGG	1 cut(s)	1905
BstF5I	GGATG	5 cut(s)	128, 894, 1270, 1546, 1780
BstFNI	CGCG	2 cut(s)	1907, 1939
BstH2I	RGCGCY	1 cut(s)	387
BstHHI	GCGC	1 cut(s)	386
BstKTI	GATC	6 cut(s)	271, 497, 685, 997, 1270, 1345
BstMAI	GTCTC	2 cut(s)	856, 2014
BstMBI	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
BstMWI	GCNNNNNNNGC	5 cut(s)	125, 336, 390, 1433, 1496
BstNI	CCWGG	4 cut(s)	426, 786, 853, 867
BstNSI	RCATGY	1 cut(s)	44
BstSCI	CCNGG	4 cut(s)	424, 784, 851, 865
BstSFI	CTRYAG	2 cut(s)	1140, 1195
BstSLI	GKGCMC	1 cut(s)	248
BstUI	CGCG	2 cut(s)	1907, 1939
BstV1I	GCAGC	5 cut(s)	380, 535, 538, 1084, 1439
BstV2I	GAAGAC	3 cut(s)	464, 1412, 1543
BstXI	CCANNNNNNTGG	1 cut(s)	703
Bsu15I	ATCGAT	1 cut(s)	114
BsuI	GTATCC	2 cut(s)	517, 700
BsuRI	GGCC	3 cut(s)	246, 1331, 1362
BsuTUI	ATCGAT	1 cut(s)	114
BtgI	CCRYGG	1 cut(s)	1905
BtgZI	GCGATG	1 cut(s)	1992
BtrI	CACGTC	1 cut(s)	1350
BtsCI	GGATG	5 cut(s)	128, 894, 1270, 1546, 1780
BtsIMutI	CAGTG	4 cut(s)	515, 1018, 1477, 1758
BveI	ACCTGC	1 cut(s)	114
Cac8I	GCNNGC	5 cut(s)	136, 196, 1312, 1492, 1895
CfoI	GCGC	1 cut(s)	386
Cfr13I	GGNCC	7 cut(s)	244, 245, 316, 736, 848, 943, 1361
Cfr42I	CCGCGG	1 cut(s)	1908
ClaI	ATCGAT	1 cut(s)	114
CpoI	CGGWCCG	1 cut(s)	316
Csp6I	GTAC	2 cut(s)	892, 1028
CspI	CGGWCCG	1 cut(s)	316
CviAII	CATG	7 cut(s)	41, 185, 327, 439, 722, 1080, 1520
CviQI	GTAC	2 cut(s)	892, 1028
DdeI	CTNAG	3 cut(s)	210, 526, 1718
DinI	GGCGCC	1 cut(s)	385
DpnI	GATC	6 cut(s)	270, 496, 684, 996, 1269, 1344
DpnII	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
DraI	TTTAAA	1 cut(s)	762
EaeI	YGGCCR	1 cut(s)	1329
Eam1104I	CTCTTC	2 cut(s)	852, 1095
EarI	CTCTTC	2 cut(s)	852, 1095
Eco130I	CCWWGG	6 cut(s)	272, 379, 619, 702, 946, 1365
Eco24I	GRGCYC	1 cut(s)	248
Eco31I	GGTCTC	1 cut(s)	856
Eco47I	GGWCC	4 cut(s)	316, 736, 848, 943
Eco57I	CTGAAG	3 cut(s)	597, 1458, 1781
EcoO109I	RGGNCCY	4 cut(s)	244, 245, 736, 943
EcoRI	GAATTC	2 cut(s)	1651, 1852
EcoRII	CCWGG	4 cut(s)	424, 784, 851, 865
EcoT14I	CCWWGG	6 cut(s)	272, 379, 619, 702, 946, 1365
EcoT22I	ATGCAT	1 cut(s)	826
EcoT38I	GRGCYC	1 cut(s)	248
EgeI	GGCGCC	1 cut(s)	385
EheI	GGCGCC	1 cut(s)	385
ErhI	CCWWGG	6 cut(s)	272, 379, 619, 702, 946, 1365
FaeI	CATG	7 cut(s)	44, 188, 330, 442, 725, 1083, 1523
FaqI	GGGAC	3 cut(s)	732, 1119, 1588
FatI	CATG	7 cut(s)	40, 184, 326, 438, 721, 1079, 1519
FauI	CCCGC	2 cut(s)	191, 1900
FbaI	TGATCA	3 cut(s)	682, 994, 1342
Fnu4HI	GCNGC	5 cut(s)	394, 549, 552, 1098, 1428
FokI	GGATG	5 cut(s)	115, 901, 1257, 1553, 1787
FriOI	GRGCYC	1 cut(s)	248
Fsp4HI	GCNGC	5 cut(s)	394, 549, 552, 1098, 1428
FspBI	CTAG	5 cut(s)	1059, 1424, 1581, 1614, 1898
GlaI	GCGC	1 cut(s)	385
GluI	GCNGC	5 cut(s)	394, 549, 552, 1098, 1428
GsaI	CCCAGC	3 cut(s)	243, 405, 1410
GsuI	CTGGAG	2 cut(s)	1481, 2016
HaeII	RGCGCY	1 cut(s)	387
HaeIII	GGCC	3 cut(s)	246, 1331, 1362
HapII	CCGG	1 cut(s)	1538
HhaI	GCGC	1 cut(s)	386
Hin1I	GRCGYC	1 cut(s)	384
Hin1II	CATG	7 cut(s)	44, 188, 330, 442, 725, 1083, 1523
Hin6I	GCGC	1 cut(s)	384
HinP1I	GCGC	1 cut(s)	384
HincII	GTYRAC	2 cut(s)	312, 1812
HindII	GTYRAC	2 cut(s)	312, 1812
HpaII	CCGG	1 cut(s)	1538
HphI	GGTGA	6 cut(s)	682, 818, 890, 1888, 1922, 1939
Hpy166II	GTNNAC	2 cut(s)	312, 1812
Hpy188I	TCNGA	9 cut(s)	148, 356, 529, 577, 732, 779, 940, 1699, 1761
Hpy188III	TCNNGA	6 cut(s)	492, 639, 1040, 1220, 1538, 1987
Hpy8I	GTNNAC	2 cut(s)	312, 1812
Hpy99I	CGWCG	1 cut(s)	1250
HpyAV	CCTTC	5 cut(s)	267, 727, 797, 1756, 1867
HpyCH4III	ACNGT	5 cut(s)	320, 1250, 1472, 1753, 1822
HpyCH4IV	ACGT	3 cut(s)	24, 1349, 1354
HpyF10VI	GCNNNNNNNGC	5 cut(s)	125, 336, 390, 1433, 1496
HpyF3I	CTNAG	3 cut(s)	210, 526, 1718
HpySE526I	ACGT	3 cut(s)	24, 1349, 1354
Hsp92I	GRCGYC	1 cut(s)	384
Hsp92II	CATG	7 cut(s)	44, 188, 330, 442, 725, 1083, 1523
HspAI	GCGC	1 cut(s)	384
KasI	GGCGCC	1 cut(s)	383
Kpn2I	TCCGGA	1 cut(s)	1537
Ksp22I	TGATCA	3 cut(s)	682, 994, 1342
KspI	CCGCGG	1 cut(s)	1908
Kzo9I	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
LmnI	GCTCC	4 cut(s)	1619, 1783, 1890, 1997
Lsp1109I	GCAGC	5 cut(s)	380, 535, 538, 1084, 1439
LweI	GCATC	6 cut(s)	76, 106, 137, 1393, 1531, 1682
MaeI	CTAG	5 cut(s)	1059, 1424, 1581, 1614, 1898
MaeII	ACGT	3 cut(s)	24, 1349, 1354
MaeIII	GTNAC	6 cut(s)	371, 813, 986, 1350, 1355, 1390
MalI	GATC	6 cut(s)	270, 496, 684, 996, 1269, 1344
MboI	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
MboII	GAAGA	9 cut(s)	23, 469, 869, 1082, 1245, 1412, 1543, 1647, 2010
MfeI	CAATTG	3 cut(s)	647, 843, 1545
MhlI	GDGCHC	1 cut(s)	248
MlsI	TGGCCA	1 cut(s)	1331
MluNI	TGGCCA	1 cut(s)	1331
Mly113I	GGCGCC	1 cut(s)	384
MlyI	GAGTC	5 cut(s)	90, 302, 1550, 1570, 1910
MmeI	TCCRAC	5 cut(s)	391, 812, 955, 1245, 1761
Mox20I	TGGCCA	1 cut(s)	1331
Mph1103I	ATGCAT	1 cut(s)	826
MroI	TCCGGA	1 cut(s)	1537
MscI	TGGCCA	1 cut(s)	1331
MseI	TTAA	6 cut(s)	180, 761, 1188, 1860, 1964, 2026
MslI	CAYNNNNRTG	3 cut(s)	189, 876, 1229
Msp20I	TGGCCA	1 cut(s)	1331
MspA1I	CMGCKG	1 cut(s)	1907
MspCI	CTTAAG	1 cut(s)	1187
MspI	CCGG	1 cut(s)	1538
MspR9I	CCNGG	4 cut(s)	426, 786, 853, 867
MunI	CAATTG	3 cut(s)	647, 843, 1545
MvaI	CCWGG	4 cut(s)	426, 786, 853, 867
MvnI	CGCG	2 cut(s)	1907, 1939
MwoI	GCNNNNNNNGC	5 cut(s)	125, 336, 390, 1433, 1496
NarI	GGCGCC	1 cut(s)	384
NdeII	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
NlaIII	CATG	7 cut(s)	44, 188, 330, 442, 725, 1083, 1523
NlaIV	GGNNCC	8 cut(s)	245, 246, 385, 850, 1363, 1744, 1785, 1892
NmuCI	GTSAC	4 cut(s)	371, 986, 1350, 1390
NsiI	ATGCAT	1 cut(s)	826
NspI	RCATGY	1 cut(s)	44
OliI	CACNNNNGTG	1 cut(s)	876
PasI	CCCWGGG	2 cut(s)	425, 852
PciI	ACATGT	1 cut(s)	40
PfeI	GAWTC	6 cut(s)	981, 1534, 1610, 1756, 1970, 2003
PflFI	GACNNNGTC	1 cut(s)	740
PflMI	CCANNNNNTGG	1 cut(s)	751
PkrI	GCNGC	5 cut(s)	395, 550, 553, 1099, 1429
PleI	GAGTC	5 cut(s)	89, 301, 1550, 1570, 1909
PluTI	GGCGCC	1 cut(s)	387
PpsI	GAGTC	5 cut(s)	89, 301, 1550, 1570, 1909
Ppu21I	YACGTR	1 cut(s)	1355
PpuMI	RGGWCCY	2 cut(s)	736, 943
PscI	ACATGT	1 cut(s)	40
PsiI	TTATAA	1 cut(s)	420
Psp5II	RGGWCCY	2 cut(s)	736, 943
Psp6I	CCWGG	4 cut(s)	424, 784, 851, 865
PspFI	CCCAGC	3 cut(s)	239, 401, 1406
PspGI	CCWGG	4 cut(s)	424, 784, 851, 865
PspN4I	GGNNCC	8 cut(s)	245, 246, 385, 850, 1363, 1744, 1785, 1892
PspOMI	GGGCCC	1 cut(s)	244
PspPI	GGNCC	7 cut(s)	244, 245, 316, 736, 848, 943, 1361
PspPPI	RGGWCCY	2 cut(s)	736, 943
PsyI	GACNNNGTC	1 cut(s)	740
RsaI	GTAC	2 cut(s)	893, 1029
RsaNI	GTAC	2 cut(s)	892, 1028
RseI	CAYNNNNRTG	3 cut(s)	189, 876, 1229
Rsr2I	CGGWCCG	1 cut(s)	316
RsrII	CGGWCCG	1 cut(s)	316
SacII	CCGCGG	1 cut(s)	1908
SaqAI	TTAA	6 cut(s)	180, 761, 1188, 1860, 1964, 2026
SatI	GCNGC	5 cut(s)	394, 549, 552, 1098, 1428
Sau3AI	GATC	6 cut(s)	268, 494, 682, 994, 1267, 1342
Sau96I	GGNCC	7 cut(s)	244, 245, 316, 736, 848, 943, 1361
SchI	GAGTC	5 cut(s)	90, 302, 1550, 1570, 1910
ScrFI	CCNGG	4 cut(s)	426, 786, 853, 867
SduI	GDGCHC	1 cut(s)	248
SfaNI	GCATC	6 cut(s)	76, 106, 137, 1393, 1531, 1682
SfcI	CTRYAG	2 cut(s)	1140, 1195
SfoI	GGCGCC	1 cut(s)	385
Sfr303I	CCGCGG	1 cut(s)	1908
SgrBI	CCGCGG	1 cut(s)	1908
SinI	GGWCC	4 cut(s)	316, 736, 848, 943
SmiMI	CAYNNNNRTG	3 cut(s)	189, 876, 1229
SmlI	CTYRAG	4 cut(s)	123, 637, 1126, 1187
SmoI	CTYRAG	4 cut(s)	123, 637, 1126, 1187
SsiI	CCGC	7 cut(s)	132, 198, 337, 1528, 1905, 1907, 1937
SspDI	GGCGCC	1 cut(s)	383
SspMI	CTAG	5 cut(s)	1059, 1424, 1581, 1614, 1898
StyD4I	CCNGG	4 cut(s)	424, 784, 851, 865
StyI	CCWWGG	6 cut(s)	272, 379, 619, 702, 946, 1365
TaaI	ACNGT	5 cut(s)	320, 1250, 1472, 1753, 1822
TaiI	ACGT	3 cut(s)	27, 1352, 1357
TaqI	TCGA	6 cut(s)	84, 114, 600, 1041, 1554, 1973
TatI	WGTACW	2 cut(s)	891, 1027
TfiI	GAWTC	6 cut(s)	981, 1534, 1610, 1756, 1970, 2003
Tru1I	TTAA	6 cut(s)	180, 761, 1188, 1860, 1964, 2026
Tru9I	TTAA	6 cut(s)	180, 761, 1188, 1860, 1964, 2026
TscAI	CASTG	4 cut(s)	522, 1018, 1477, 1758
TseFI	GTSAC	4 cut(s)	371, 986, 1350, 1390
TseI	GCWGC	5 cut(s)	393, 548, 551, 1097, 1427
Tsp45I	GTSAC	4 cut(s)	371, 986, 1350, 1390
TspDTI	ATGAA	5 cut(s)	312, 455, 477, 1283, 1932
TspGWI	ACGGA	5 cut(s)	329, 499, 993, 1783, 1903
TspRI	CASTG	4 cut(s)	522, 1018, 1477, 1758
Tth111I	GACNNNGTC	1 cut(s)	740
Van91I	CCANNNNNTGG	1 cut(s)	751
Vha464I	CTTAAG	1 cut(s)	1187
VpaK11BI	GGWCC	4 cut(s)	316, 736, 848, 943
XapI	RAATTY	9 cut(s)	162, 414, 596, 1052, 1651, 1693, 1735, 1789, 1852
XceI	RCATGY	1 cut(s)	44
XcmI	CCANNNNNNNNNTGG	1 cut(s)	191
XspI	CTAG	5 cut(s)	1059, 1424, 1581, 1614, 1898
Zsp2I	ATGCAT	1 cut(s)	826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.