Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0007807

Physical Location & Seq

Genomic Coordinates Reverse (-)

39294269 .. 39309641

Gene Structure 15373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G027540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGAAGGCCGTCGTCTTGCTCTGCTGCTGCTGCTGCTTTCTGTTCCAACGTTTCGCTGTTGGAGCTGATACAAACCCGACAGCAGAGCTGCTTGTTGATGCTTCTCAATCATCCGGACGACTAATATCTCCAACACTCTTTGGAATTTTCTTCGAGGAGATTAACCATGCTGGCGCTGGTGGGTTGTGGGCTGAACTTGTAAGCAACCGAGGTTTTGAATCTGGGGGACCTAACACTCCTTCCAACATTGATCCCTGGTCAATTATTGGGAATGAGTCATCTTTGCTTGTATCGACGGACCGGTCGTCATGTTTCGAGCGCAATAAAGTTGCACTTCGAATGGAGGTTCTATGTGACAGCCAAGATGCCAATATCTGTCCTTCTGGGGGTGTTGGTATTTATAACCCTGGGTTCTGGGGCATGAATGTCGAAAAAGGGAAGACCTACATTGTAACTCTTTATGTTCGTTCATCTGGAGCAATCAATGTATCTGTGTCGTTGACGAGTTCCAATGGATTGCAGACTCTTGCTGCTGATAACATTATAGCTTCTGTTTCAGAAGTTTCAAACTGGACGAAATTTAAAGTTCTGTTGGAAGCCAAAGCAACAAATCCTAGTTCAAGATTGCAATTGACAACCACCAGAAAAGGGTTGATATGGTTTGATCAAGTGTCAGTCATGCCTTCGGACACATACAAGGGACATGGATTTAGGAAGGACCTTGTCGACATGTTGGCAGATCTAAAACCCCAATTTATTAGATTTCCAGGTGGCTGTTTTGTTGAAGGTGAATGGTTAAGAAATGCATTTCGCTGGAAAGAAACAATTGGACCATGGGAAGAGAGACCTGGACACTTTGGTGATGTTGGATGTACTGGACTGATGATGGACTTGCTAGCAGAGGACCTTGGTACACGGCCAATATGGGTGTTCAACAATGGAATCAGCCACAATGATCAAGTTGATACTTCCAATGTCTTACCGTTTGTACAGGAAGCTCTTGATGGTATTGAGTTTGCTAGGGGCGATCCTGATTCTACATGGGGTTCTCTCCGTGCCGCAATGGGACACCCAGAGCCCTTTGACTTGAGATATGTTGCTGTTGGGAATGAGGATTGTGGCAAAAAGAATTACCGAGGAAATTACCTTAAGTTCTACAGTGCTATAAAGCGTGCCTATCCGGACATCCAAATAATTTCTAACTGCGATGGCTCTTCTCAACCTTTGGATCATCCAGCTGATTTGTATGACTTTCATGTTTATACTTCAGCAAGCAACATGTTTTCGATGGCTCATCGGTTTGATCGTGCACCACGTAAGGCTTTTGTGAGTGAGTATGCTGTGACCGGAAAAGATGCTGGAGCAGGAAGTCTTCTCGCAGCATTGGCAGAAGCTGGATTTCTGATTGGGCTTGAAAAAAACAGTGATGTTGTTGAGATGGCAAGTTATGCGCCACTCTTTGTGAATGCCAATAACAAGCGGTGGAACCCAGATGCAATCGTGTTTAACTCCTCACAGCTGTATGGAACTCCTAGCTACTGGGTGCAATGTTTTTTTAGTGAATCAAGTGGAGCAACTATTTTCAATGCAACACTCCAAACAAATTCTTCTACTTCACTTCTTGCATCTGCAATTTCGTGGAAAAGTTCTGAAGATCAGAATACTTACCTAAGAATTAAGATTGTGAACTTTGGAAGCAACATAGTAAATCTTACGATCCGTGTTGATGGGTTGGGGCCAAATTTTGTTGGTCTGTCTGGATCAACCAAGACTGTGCTCACATCTAAAAATGTGATGGATGAGAACTCGTTTGGTGAGCCAAAGAAGGTCATACCGAACCTGAGTCTACTTGAACAGGCTGGTGAGGAAATGGATGTTGGACTTTCTGCACATTCCTTCACTTCAATTGATTTGTTAATGGAACCAAGTTATATCAGGACTGGAGCTGATTCTTTCTCCCTGTCTTCTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009505 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Alpha-L-AF_C

Protein Analysis

657

Amino Acids

71.72

Weight (kDa)

5.1

Isoelectric Point (pI)

31.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ASD1_dom	PF22848	245 - 439	1.3e-48	Alpha-L-arabinofuranosidase 1 domain
Alpha-L-AF_C	PF06964	456 - 632	2.4e-22	Alpha-L-arabinofuranosidase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10740 AT3G10740 AT3G10740 AT3G10740
fragaria_vesca	FvH4_1g29140 FvH4_1g29140
malus_domestica	MD12G1112100.v1.1 MD14G1101200.v1.1
prunus_persica	Prupe.7G021200_v2.0.a1 Prupe.7G021200_v2.0.a1 Prupe.7G021200_v2.0.a1
pyrus_communis	pycom12g09150 pycom14g08790
rosa_chinensis	RchiOBHm_Chr3g0494401
rosa_laevigata	RLG00000022674
rosa_multiflora	Rmu_sc0001481.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391120
rosa_rugosa	Rorug03G0265100 Rorug03G0265200
rosa_samantha	Rh3AG315400 Rh3BG350600 Rh3CG347300 Rh3DG349900
rosa_wichuraiana	Rw3G027540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	402
AasI	GACNNNNNNGTC	1 cut(s)	301
AccI	GTMKAC	2 cut(s)	726, 1846
AccIII	TCCGGA	2 cut(s)	113, 1180
AciI	CCGC	2 cut(s)	1059, 1480
AclI	AACGTT	1 cut(s)	49
AclWI	GGATC	5 cut(s)	245, 1022, 1236, 1711, 1768
AcoI	YGGCCR	1 cut(s)	917
AcsI	RAATTY	4 cut(s)	144, 578, 1603, 1741
AcuI	CTGAAG	2 cut(s)	1251, 1671
AfaI	GTAC	3 cut(s)	874, 913, 990
AfiI	CCNNNNNNNGG	2 cut(s)	386, 648
AflII	CTTAAG	1 cut(s)	1148
AflIII	ACRYGT	2 cut(s)	729, 1278
AgeI	ACCGGT	1 cut(s)	300
AgsI	TTSAA	9 cut(s)	218, 567, 621, 785, 934, 1415, 1585, 1853, 1905
AhdI	GACNNNNNGTC	1 cut(s)	304
AjnI	CCWGG	4 cut(s)	254, 406, 766, 847
AjuI	GAANNNNNNNTTGG	2 cut(s)	1860, 1892
AleI	CACNNNNGTG	1 cut(s)	858
AluBI	AGCT	9 cut(s)	65, 88, 548, 998, 1238, 1394, 1519, 1536, 1946
AluI	AGCT	9 cut(s)	65, 88, 548, 998, 1238, 1394, 1519, 1536, 1946
Alw21I	GWGCWC	2 cut(s)	1312, 1779
Alw26I	GTCTC	1 cut(s)	838
Alw44I	GTGCAC	1 cut(s)	1308
AlwI	GGATC	5 cut(s)	245, 1022, 1236, 1711, 1768
AlwNI	CAGNNNCTG	1 cut(s)	1394
Aor13HI	TCCGGA	2 cut(s)	113, 1180
AoxI	GGCC	3 cut(s)	6, 917, 1736
ApaLI	GTGCAC	1 cut(s)	1308
ApeKI	GCWGC	7 cut(s)	24, 27, 30, 33, 88, 530, 1379
ApoI	RAATTY	4 cut(s)	144, 578, 1603, 1741
AsiGI	ACCGGT	1 cut(s)	300
AspLEI	GCGC	3 cut(s)	176, 321, 1453
AspS9I	GGNCC	6 cut(s)	227, 298, 718, 830, 904, 1736
AsuHPI	GGTGA	4 cut(s)	800, 872, 1826, 1874
AsuII	TTCGAA	1 cut(s)	337
AsuNHI	GCTAGC	1 cut(s)	895
AvaII	GGWCC	5 cut(s)	227, 298, 718, 830, 904
BaeGI	GKGCMC	1 cut(s)	1312
BanII	GRGCYC	1 cut(s)	1080
BbsI	GAAGAC	3 cut(s)	446, 1364, 1956
Bbv12I	GWGCWC	2 cut(s)	1312, 1779
BbvI	GCAGC	7 cut(s)	11, 14, 17, 20, 75, 517, 1391
BccI	CCATC	7 cut(s)	880, 998, 1202, 1282, 1432, 1721, 1789
BceAI	ACGGC	1 cut(s)	932
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	4 cut(s)	256, 408, 768, 849
BclI	TGATCA	2 cut(s)	664, 955
BcoDI	GTCTC	1 cut(s)	838
BfaI	CTAG	4 cut(s)	615, 896, 1020, 1533
BfmI	CTRYAG	1 cut(s)	1156
BfoI	RGCGCY	1 cut(s)	177
BfrI	CTTAAG	1 cut(s)	1148
BglII	AGATCT	1 cut(s)	739
BisI	GCNGC	8 cut(s)	25, 28, 31, 34, 89, 531, 1059, 1380
BlsI	GCNGC	8 cut(s)	26, 29, 32, 35, 90, 532, 1060, 1381
Bme1390I	CCNGG	4 cut(s)	256, 408, 768, 849
Bme18I	GGWCC	5 cut(s)	227, 298, 718, 830, 904
BmeRI	GACNNNNNGTC	1 cut(s)	304
BmgT120I	GGNCC	6 cut(s)	227, 298, 718, 830, 904, 1736
BmiI	GGNNCC	4 cut(s)	228, 1487, 1737, 1923
BmrFI	CCNGG	4 cut(s)	256, 408, 768, 849
BmrI	ACTGGG	1 cut(s)	1549
BmsI	GCATC	5 cut(s)	88, 355, 1345, 1483, 1634
BmtI	GCTAGC	1 cut(s)	899
BmuI	ACTGGG	1 cut(s)	1549
BpiI	GAAGAC	3 cut(s)	446, 1364, 1956
BpmI	CTGGAG	3 cut(s)	495, 1380, 1962
Bpu14I	TTCGAA	1 cut(s)	337
BpuEI	CTTGAG	1 cut(s)	1108
BsaAI	YACGTR	1 cut(s)	1316
BsaI	GGTCTC	1 cut(s)	838
BsaJI	CCNNGG	7 cut(s)	208, 254, 406, 407, 833, 907, 1135
BsaWI	WCCGGW	4 cut(s)	113, 300, 1180, 1346
Bsc4I	CCNNNNNNNGG	2 cut(s)	386, 648
Bse118I	RCCGGY	1 cut(s)	300
Bse1I	ACTGG	4 cut(s)	575, 880, 1544, 1945
Bse3DI	GCAATG	2 cut(s)	1068, 1553
BseAI	TCCGGA	2 cut(s)	113, 1180
BseBI	CCWGG	4 cut(s)	256, 408, 768, 849
BseDI	CCNNGG	7 cut(s)	208, 254, 406, 407, 833, 907, 1135
BseGI	GGATG	6 cut(s)	110, 875, 1185, 1231, 1804, 1879
BseLI	CCNNNNNNNGG	2 cut(s)	386, 648
BseMI	GCAATG	2 cut(s)	1068, 1553
BseMII	CTCAG	1 cut(s)	1832
BseNI	ACTGG	4 cut(s)	575, 880, 1544, 1945
BseRI	GAGGAG	2 cut(s)	170, 1501
BseSI	GKGCMC	1 cut(s)	1312
BseXI	GCAGC	7 cut(s)	11, 14, 17, 20, 75, 517, 1391
BsgI	GTGCAG	1 cut(s)	1872
Bsh1285I	CGRYCG	1 cut(s)	305
BshFI	GGCC	3 cut(s)	8, 919, 1738
BshTI	ACCGGT	1 cut(s)	300
BsiEI	CGRYCG	1 cut(s)	305
BsiHKAI	GWGCWC	2 cut(s)	1312, 1779
BsiSI	CCGG	4 cut(s)	114, 301, 1181, 1347
BslFI	GGGAC	3 cut(s)	240, 714, 1080
BslI	CCNNNNNNNGG	2 cut(s)	386, 648
BsmAI	GTCTC	1 cut(s)	838
BsmFI	GGGAC	3 cut(s)	240, 714, 1080
BsmI	GAATGC	1 cut(s)	1471
BsnI	GGCC	3 cut(s)	8, 919, 1738
Bso31I	GGTCTC	1 cut(s)	838
Bsp119I	TTCGAA	1 cut(s)	337
Bsp1286I	GDGCHC	3 cut(s)	1080, 1312, 1779
Bsp13I	TCCGGA	2 cut(s)	113, 1180
Bsp1407I	TGTACA	1 cut(s)	988
Bsp19I	CCATGG	1 cut(s)	833
BspACI	CCGC	2 cut(s)	1059, 1480
BspANI	GGCC	3 cut(s)	8, 919, 1738
BspCNI	CTCAG	1 cut(s)	1833
BspEI	TCCGGA	2 cut(s)	113, 1180
BspLI	GGNNCC	4 cut(s)	228, 1487, 1737, 1923
BspOI	GCTAGC	1 cut(s)	899
BspPI	GGATC	5 cut(s)	245, 1022, 1236, 1711, 1768
BspQI	GCTCTTC	1 cut(s)	1219
BspT104I	TTCGAA	1 cut(s)	337
BspTI	CTTAAG	1 cut(s)	1148
BspTNI	GGTCTC	1 cut(s)	838
BsrDI	GCAATG	2 cut(s)	1068, 1553
BsrFI	RCCGGY	1 cut(s)	300
BsrGI	TGTACA	1 cut(s)	988
BsrI	ACTGG	4 cut(s)	575, 880, 1544, 1945
BssAI	RCCGGY	1 cut(s)	300
BssECI	CCNNGG	7 cut(s)	208, 254, 406, 407, 833, 907, 1135
BssT1I	CCWWGG	2 cut(s)	833, 907
Bst2UI	CCWGG	4 cut(s)	256, 408, 768, 849
Bst4CI	ACNGT	4 cut(s)	984, 1160, 1424, 1774
Bst6I	CTCTTC	2 cut(s)	834, 1219
BstAFI	CTTAAG	1 cut(s)	1148
BstAPI	GCANNNNNTGC	1 cut(s)	1448
BstAUI	TGTACA	1 cut(s)	988
BstBAI	YACGTR	1 cut(s)	1316
BstBI	TTCGAA	1 cut(s)	337
BstC8I	GCNNGC	4 cut(s)	172, 897, 1173, 1273
BstDEI	CTNAG	2 cut(s)	1670, 1841
BstDSI	CCRYGG	1 cut(s)	833
BstF5I	GGATG	6 cut(s)	110, 875, 1185, 1231, 1804, 1879
BstH2I	RGCGCY	1 cut(s)	177
BstHHI	GCGC	3 cut(s)	176, 321, 1453
BstMAI	GTCTC	1 cut(s)	838
BstMCI	CGRYCG	1 cut(s)	305
BstMWI	GCNNNNNNNGC	5 cut(s)	30, 33, 62, 1385, 1448
BstNI	CCWGG	4 cut(s)	256, 408, 768, 849
BstNSI	RCATGY	2 cut(s)	733, 1282
BstSCI	CCNGG	4 cut(s)	254, 406, 766, 847
BstSFI	CTRYAG	1 cut(s)	1156
BstSLI	GKGCMC	1 cut(s)	1312
BstV1I	GCAGC	7 cut(s)	11, 14, 17, 20, 75, 517, 1391
BstV2I	GAAGAC	3 cut(s)	446, 1364, 1956
BstX2I	RGATCY	1 cut(s)	739
BstYI	RGATCY	1 cut(s)	739
BsuRI	GGCC	3 cut(s)	8, 919, 1738
BtgI	CCRYGG	1 cut(s)	833
BtgZI	GCGATG	1 cut(s)	1221
BtsCI	GGATG	6 cut(s)	110, 875, 1185, 1231, 1804, 1879
BtsIMutI	CAGTG	2 cut(s)	1165, 1429
Cac8I	GCNNGC	4 cut(s)	172, 897, 1173, 1273
CaiI	CAGNNNCTG	1 cut(s)	1394
CfoI	GCGC	3 cut(s)	176, 321, 1453
Cfr10I	RCCGGY	1 cut(s)	300
Cfr13I	GGNCC	6 cut(s)	227, 298, 718, 830, 904, 1736
CpoI	CGGWCCG	1 cut(s)	298
Csp6I	GTAC	3 cut(s)	873, 912, 989
CspAI	ACCGGT	1 cut(s)	300
CspI	CGGWCCG	1 cut(s)	298
CviQI	GTAC	3 cut(s)	873, 912, 989
DdeI	CTNAG	2 cut(s)	1670, 1841
DraI	TTTAAA	1 cut(s)	583
DrdI	GACNNNNNNGTC	1 cut(s)	301
DriI	GACNNNNNGTC	1 cut(s)	304
DseDI	GACNNNNNNGTC	1 cut(s)	301
EaeI	YGGCCR	1 cut(s)	917
Eam1104I	CTCTTC	2 cut(s)	834, 1219
Eam1105I	GACNNNNNGTC	1 cut(s)	304
EarI	CTCTTC	2 cut(s)	834, 1219
Eco130I	CCWWGG	2 cut(s)	833, 907
Eco24I	GRGCYC	1 cut(s)	1080
Eco31I	GGTCTC	1 cut(s)	838
Eco47I	GGWCC	5 cut(s)	227, 298, 718, 830, 904
Eco57I	CTGAAG	2 cut(s)	1251, 1671
EcoO109I	RGGNCCY	3 cut(s)	227, 718, 904
EcoRII	CCWGG	4 cut(s)	254, 406, 766, 847
EcoT14I	CCWWGG	2 cut(s)	833, 907
EcoT22I	ATGCAT	1 cut(s)	808
EcoT38I	GRGCYC	1 cut(s)	1080
ErhI	CCWWGG	2 cut(s)	833, 907
FalI	AAGNNNNNCTT	2 cut(s)	318, 350
FaqI	GGGAC	3 cut(s)	240, 714, 1080
FbaI	TGATCA	2 cut(s)	664, 955
FblI	GTMKAC	2 cut(s)	726, 1846
Fnu4HI	GCNGC	8 cut(s)	25, 28, 31, 34, 89, 531, 1059, 1380
FokI	GGATG	6 cut(s)	97, 882, 1172, 1218, 1811, 1886
FriOI	GRGCYC	1 cut(s)	1080
Fsp4HI	GCNGC	8 cut(s)	25, 28, 31, 34, 89, 531, 1059, 1380
FspBI	CTAG	4 cut(s)	615, 896, 1020, 1533
GlaI	GCGC	3 cut(s)	175, 320, 1452
GluI	GCNGC	8 cut(s)	25, 28, 31, 34, 89, 531, 1059, 1380
GsuI	CTGGAG	3 cut(s)	495, 1380, 1962
HaeII	RGCGCY	1 cut(s)	177
HaeIII	GGCC	3 cut(s)	8, 919, 1738
HapII	CCGG	4 cut(s)	114, 301, 1181, 1347
HhaI	GCGC	3 cut(s)	176, 321, 1453
Hin6I	GCGC	3 cut(s)	174, 319, 1451
HinP1I	GCGC	3 cut(s)	174, 319, 1451
HincII	GTYRAC	2 cut(s)	501, 727
HindII	GTYRAC	2 cut(s)	501, 727
HinfI	GANTC	8 cut(s)	218, 275, 523, 942, 1034, 1562, 1843, 1949
HpaII	CCGG	4 cut(s)	114, 301, 1181, 1347
HphI	GGTGA	4 cut(s)	800, 872, 1826, 1874
Hpy166II	GTNNAC	6 cut(s)	501, 727, 914, 1310, 1687, 1847
Hpy188I	TCNGA	5 cut(s)	559, 688, 1404, 1651, 1659
Hpy188III	TCNNGA	8 cut(s)	114, 474, 621, 1001, 1031, 1181, 1758, 1936
Hpy8I	GTNNAC	6 cut(s)	501, 727, 914, 1310, 1687, 1847
Hpy99I	CGWCG	2 cut(s)	14, 298
HpyAV	CCTTC	7 cut(s)	249, 390, 693, 709, 779, 1819, 1906
HpyCH4III	ACNGT	4 cut(s)	984, 1160, 1424, 1774
HpyCH4IV	ACGT	2 cut(s)	49, 1315
HpyF10VI	GCNNNNNNNGC	5 cut(s)	30, 33, 62, 1385, 1448
HpyF3I	CTNAG	2 cut(s)	1670, 1841
HpySE526I	ACGT	2 cut(s)	49, 1315
HspAI	GCGC	3 cut(s)	174, 319, 1451
Kpn2I	TCCGGA	2 cut(s)	113, 1180
Ksp22I	TGATCA	2 cut(s)	664, 955
LguI	GCTCTTC	1 cut(s)	1219
LmnI	GCTCC	5 cut(s)	62, 476, 1361, 1571, 1943
Lsp1109I	GCAGC	7 cut(s)	11, 14, 17, 20, 75, 517, 1391
LweI	GCATC	5 cut(s)	88, 355, 1345, 1483, 1634
MaeI	CTAG	4 cut(s)	615, 896, 1020, 1533
MaeII	ACGT	2 cut(s)	49, 1315
MaeIII	GTNAC	3 cut(s)	353, 451, 1342
MboII	GAAGA	8 cut(s)	142, 451, 851, 1206, 1364, 1599, 1664, 1956
MfeI	CAATTG	3 cut(s)	629, 825, 1905
MflI	RGATCY	1 cut(s)	739
MhlI	GDGCHC	3 cut(s)	1080, 1312, 1779
MlyI	GAGTC	3 cut(s)	284, 517, 1852
MmeI	TCCRAC	7 cut(s)	40, 70, 155, 267, 573, 847, 1858
MnlI	CCTC	8 cut(s)	148, 203, 337, 895, 1105, 1130, 1522, 1858
Mph1103I	ATGCAT	1 cut(s)	808
MroI	TCCGGA	2 cut(s)	113, 1180
MseI	TTAA	7 cut(s)	162, 582, 797, 1149, 1506, 1677, 1916
MslI	CAYNNNNRTG	1 cut(s)	858
MspA1I	CMGCKG	2 cut(s)	1238, 1519
MspCI	CTTAAG	1 cut(s)	1148
MspI	CCGG	4 cut(s)	114, 301, 1181, 1347
MspR9I	CCNGG	4 cut(s)	256, 408, 768, 849
MunI	CAATTG	3 cut(s)	629, 825, 1905
Mva1269I	GAATGC	1 cut(s)	1471
MvaI	CCWGG	4 cut(s)	256, 408, 768, 849
MwoI	GCNNNNNNNGC	5 cut(s)	30, 33, 62, 1385, 1448
NcoI	CCATGG	1 cut(s)	833
NheI	GCTAGC	1 cut(s)	895
NlaIV	GGNNCC	4 cut(s)	228, 1487, 1737, 1923
NmuCI	GTSAC	2 cut(s)	353, 1342
NsiI	ATGCAT	1 cut(s)	808
NspI	RCATGY	2 cut(s)	733, 1282
NspV	TTCGAA	1 cut(s)	337
OliI	CACNNNNGTG	1 cut(s)	858
PasI	CCCWGGG	1 cut(s)	407
PciI	ACATGT	2 cut(s)	729, 1278
PciSI	GCTCTTC	1 cut(s)	1219
PcsI	WCGNNNNNNNCGW	3 cut(s)	302, 1303, 1312
PctI	GAATGC	1 cut(s)	1471
PfeI	GAWTC	5 cut(s)	218, 942, 1034, 1562, 1949
PflFI	GACNNNGTC	1 cut(s)	722
PinAI	ACCGGT	1 cut(s)	300
PkrI	GCNGC	8 cut(s)	26, 29, 32, 35, 90, 532, 1060, 1381
PleI	GAGTC	3 cut(s)	283, 517, 1851
PpsI	GAGTC	3 cut(s)	283, 517, 1851
Ppu21I	YACGTR	1 cut(s)	1316
PpuMI	RGGWCCY	3 cut(s)	227, 718, 904
PscI	ACATGT	2 cut(s)	729, 1278
PsiI	TTATAA	1 cut(s)	402
Psp1406I	AACGTT	1 cut(s)	49
Psp5II	RGGWCCY	3 cut(s)	227, 718, 904
Psp6I	CCWGG	4 cut(s)	254, 406, 766, 847
PspGI	CCWGG	4 cut(s)	254, 406, 766, 847
PspN4I	GGNNCC	4 cut(s)	228, 1487, 1737, 1923
PspPI	GGNCC	6 cut(s)	227, 298, 718, 830, 904, 1736
PspPPI	RGGWCCY	3 cut(s)	227, 718, 904
PstNI	CAGNNNCTG	1 cut(s)	1394
PsuI	RGATCY	1 cut(s)	739
PsyI	GACNNNGTC	1 cut(s)	722
PvuII	CAGCTG	2 cut(s)	1238, 1519
RsaI	GTAC	3 cut(s)	874, 913, 990
RsaNI	GTAC	3 cut(s)	873, 912, 989
RseI	CAYNNNNRTG	1 cut(s)	858
Rsr2I	CGGWCCG	1 cut(s)	298
RsrII	CGGWCCG	1 cut(s)	298
SalI	GTCGAC	1 cut(s)	725
SapI	GCTCTTC	1 cut(s)	1219
SaqAI	TTAA	7 cut(s)	162, 582, 797, 1149, 1506, 1677, 1916
SatI	GCNGC	8 cut(s)	25, 28, 31, 34, 89, 531, 1059, 1380
Sau96I	GGNCC	6 cut(s)	227, 298, 718, 830, 904, 1736
SchI	GAGTC	3 cut(s)	284, 517, 1852
ScrFI	CCNGG	4 cut(s)	256, 408, 768, 849
SduI	GDGCHC	3 cut(s)	1080, 1312, 1779
SfaNI	GCATC	5 cut(s)	88, 355, 1345, 1483, 1634
SfcI	CTRYAG	1 cut(s)	1156
SfuI	TTCGAA	1 cut(s)	337
SinI	GGWCC	5 cut(s)	227, 298, 718, 830, 904
SmiMI	CAYNNNNRTG	1 cut(s)	858
SmlI	CTYRAG	2 cut(s)	1087, 1148
SmoI	CTYRAG	2 cut(s)	1087, 1148
SsiI	CCGC	2 cut(s)	1059, 1480
SspMI	CTAG	4 cut(s)	615, 896, 1020, 1533
StyD4I	CCNGG	4 cut(s)	254, 406, 766, 847
StyI	CCWWGG	2 cut(s)	833, 907
TaaI	ACNGT	4 cut(s)	984, 1160, 1424, 1774
TaiI	ACGT	2 cut(s)	52, 1318
TaqI	TCGA	7 cut(s)	153, 293, 315, 337, 429, 726, 1286
TatI	WGTACW	2 cut(s)	872, 988
TauI	GCSGC	1 cut(s)	1061
TfiI	GAWTC	5 cut(s)	218, 942, 1034, 1562, 1949
Tru1I	TTAA	7 cut(s)	162, 582, 797, 1149, 1506, 1677, 1916
Tru9I	TTAA	7 cut(s)	162, 582, 797, 1149, 1506, 1677, 1916
TscAI	CASTG	2 cut(s)	1165, 1429
TseFI	GTSAC	2 cut(s)	353, 1342
TseI	GCWGC	7 cut(s)	24, 27, 30, 33, 88, 530, 1379
Tsp45I	GTSAC	2 cut(s)	353, 1342
TspDTI	ATGAA	4 cut(s)	17, 437, 459, 1244
TspGWI	ACGGA	3 cut(s)	311, 1043, 1709
TspRI	CASTG	2 cut(s)	1165, 1429
Tth111I	GACNNNGTC	1 cut(s)	722
Vha464I	CTTAAG	1 cut(s)	1148
VneI	GTGCAC	1 cut(s)	1308
VpaK11BI	GGWCC	5 cut(s)	227, 298, 718, 830, 904
XapI	RAATTY	4 cut(s)	144, 578, 1603, 1741
XceI	RCATGY	2 cut(s)	733, 1282
XcmI	CCANNNNNNNNNTGG	1 cut(s)	173
XmiI	GTMKAC	2 cut(s)	726, 1846
XspI	CTAG	4 cut(s)	615, 896, 1020, 1533
Zsp2I	ATGCAT	1 cut(s)	808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.